Miyakogusa Predicted Gene

Lj3g3v3639130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LFW6_SOYBN 1034 55.5 65.9 (tr|I1LFW6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G02890.1 365 35.2 51.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:640828-645303 FORWARD LENGTH=994
Medicago Medtr0001s0570.6 744 59.2 69.0 | RING/FYVE/PHD zinc finger protein, putative | HC | scaffold0001:430833-437206 | 20130731
Soybean Glyma11g01070.1 973 53.6 63.7  
LJGI gnl|LJGI|CN824943 1388 99.9 99.9 similar to UniRef100_A7PB64 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3639130.1 length: 965 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 0.0062 276-323
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 8e-10 240-323
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 7.6e-12 259-327
no_ID  
HMMPanther PTHR22880 FALZ-RELATED 7.9e-52 260-466
HMMPanther PTHR22880:SF78 BROMODOMAIN 7.9e-52 260-466
Seg seg seg NA 47-58
260-268
440-448
Wolf-PSORT
Lj3g3v3639130.1	nucl 6, chlo 5, cyto 1, vacu 1, pero 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3639130.1