Miyakogusa Predicted Gene
- Lj3g3v3639130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3639130.1 tr|Q53MN0|Q53MN0_ORYSJ PHD-finger family protein,
expressed OS=Oryza sativa subsp. japonica GN=LOC_O,50,2e-17,seg,NULL;
no description,Zinc finger, RING/FYVE/PHD-type; BROMODOMAIN CONTAINING
PROTEIN,NULL; FALZ-,CUFF.46051.1
(2895 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CN824943 similar to UniRef100_A7PB64 Cluster: Chromosom... 1388 0.0
gnl|LJGI|AU251411 UniRef100_A5WHN9 Cluster: Oligopeptidase A; n=... 379 e-104
gnl|LJGI|BW595914 similar to UniRef100_A9VE72 Cluster: Predicted... 76 1e-12
>gnl|LJGI|CN824943 similar to UniRef100_A7PB64 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 705
Score = 1388 bits (700), Expect = 0.0
Identities = 703/704 (99%)
Strand = Plus / Plus
Query: 2144 aagacttgctcaatcgtgctttggaaatctcaaatgttatttcaaagacgtcagctattc 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagacttgctcaatcgtgctttggaaatctcaaatgttatttcaaagacgtcagctattc 61
Query: 2204 cagaatacaaatacatctggcagggtgtctttgaagtgcatagaagtggaaagcctcctg 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cagaatacaaatacatctggcagggtgtctttgaagtgcatagaagtggaaagcctcctg 121
Query: 2264 acttgtatactggaattcaagcacatttatcctcatgtgcttctccaaaggttcttgacg 2323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acttgtatactggaattcaagcacatttatcctcatgtgcttctccaaaggttcttgacg 181
Query: 2324 ttgtgaacaaatttttacctgaagtttctctacatgaagtttctcgcttgagcacatggc 2383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttgtgaacaaatttttacctgaagtttctctacatgaagtttctcgcttgagcacatggc 241
Query: 2384 cttcacaatttcatcaaggtggaggtgctaaagaagataatattgccctttacttctttg 2443
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 242 cttcacaatttcatcaaggtggaggttctaaagaagataatattgccctttacttctttg 301
Query: 2444 ctaaagacattgaaagttatgagagatattacaagagtctattggatcacatgattaaaa 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctaaagacattgaaagttatgagagatattacaagagtctattggatcacatgattaaaa 361
Query: 2504 atgatttagcacttaaagggacttttgatggtgttgaacttctcatatttacatccaatc 2563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgatttagcacttaaagggacttttgatggtgttgaacttctcatatttacatccaatc 421
Query: 2564 agcttcctgaaaattcacagcgttggaatacgttgtttttcttatggggcatatttagag 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agcttcctgaaaattcacagcgttggaatacgttgtttttcttatggggcatatttagag 481
Query: 2624 gaaggaggattaatcattcagattctgcaaaaaagatttgtattcccagtttgaatgtta 2683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaaggaggattaatcattcagattctgcaaaaaagatttgtattcccagtttgaatgtta 541
Query: 2684 ttccaaatgagaagtgttttccaactgctgtcatgactttgtctgaaactccctgctcac 2743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttccaaatgagaagtgttttccaactgctgtcatgactttgtctgaaactccctgctcac 601
Query: 2744 cggcgcgggtgggtgcagagtcgattgcttgttgtggtaaagctggcagtgcacttcttc 2803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cggcgcgggtgggtgcagagtcgattgcttgttgtggtaaagctggcagtgcacttcttc 661
Query: 2804 catctacttccattgagcaagctcatattttgaaaggtagtgca 2847
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 catctacttccattgagcaagctcatattttgaaaggtagtgca 705
>gnl|LJGI|AU251411 UniRef100_A5WHN9 Cluster: Oligopeptidase A; n=1; Psychrobacter sp.
PRwf-1|Rep: Oligopeptidase A - Psychrobacter sp., partial
(1%)
Length = 392
Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1887 aagtcttactaatacttctgagtgttgcacaattggtggtacacaggaactcggtgatga 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcttactaatacttctgagtgttgcacaattggtggtacacaggaactcggtgatga 60
Query: 1947 agtatcagtcaatgccacaagtagttcaaaagaggaaatgcataatggtaatagtttgaa 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtatcagtcaatgccacaagtagttcaaaagaggaaatgcataatggtaatagtttgaa 120
Query: 2007 agctgcaatccacgcagctttgcttagaaggcctgaaatacacaagaagaaagatgtacc 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgcaatccacgcagctttgcttagaaggcctgaaatacacaagaagaaagatgtacc 180
Query: 2067 tgagcgaacag 2077
|||||||||||
Sbjct: 181 tgagcgaacag 191
>gnl|LJGI|BW595914 similar to UniRef100_A9VE72 Cluster: Predicted protein; n=1; Monosiga
brevicollis MX1|Rep: Predicted protein - Monosiga
brevicollis MX1, partial (12%)
Length = 539
Score = 75.8 bits (38), Expect = 1e-12
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 2854 catggacaggacagagagtctaaacctctcaaggcaacgaga 2895
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 catggacaggacagagagtctaaacctctcatggcaacgaga 42