Miyakogusa Predicted Gene

Lj3g3v2655630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M589_SOYBN 688 66.6 75.7 (tr|I1M589) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G14010.4 325 50.0 64.5 | Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640324 FORWARD LENGTH=549
Medicago Medtr8g019560.2 724 70.6 76.7 | CTC-interacting domain protein | HC | chr8:6913038-6903510 | 20130731
Soybean Glyma13g42230.2 688 66.6 75.7  
LJGI gnl|LJGI|AV418429 680 95.5 95.5 similar to UniRef100_A2PZE4 Cluster: Ataxin-2 related protein; n=1; Ipomoea nil|Rep: Ataxin-2 related protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2655630.1 length: 523 aa.
IPR009604 LsmAD domain
method AccNumber shortName E-value location
HMMPfam PF06741 LsmAD 6e-20 221-280
IPR025852 SM domain found in ataxin-2
HMMPfam PF14438 SM-ATX 1.4e-27 62-186
no_ID  
Coil coil coiled-coil NA 242-263
Gene3D G3DSA:2.30.30.100 no description 0.00026 71-140
HMMPanther PTHR12854 ATAXIN 6e-80 1-523
Seg seg seg NA 468-480
489-510
Wolf-PSORT
Lj3g3v2655630.1	nucl 9.5, cyto_nucl 5.5, plas 1.5, golg_plas 1.5, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2655630.1