Miyakogusa Predicted Gene

Lj3g3v1074930.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IRT5_MEDTR 555 71.0 77.1 (tr|G7IRT5) Ribonuclease OS=Medicago truncatula GN=MTR_2g094490 PE=4 SV=1
TAIR_pep AT2G28380.1 408 65.5 72.7 | Symbols: DRB2 | dsRNA-binding protein 2 | chr2:12134098-12135915 REVERSE LENGTH=434
Medicago Medtr2g094490.1 555 71.0 77.1 | double-stranded RNA-binding motif protein | HC | chr2:40288473-40292848 | 20130731
Soybean Glyma12g29420.1 541 68.7 75.1  
LJGI gnl|LJGI|TC67469 2771 99.3 99.3 similar to UniRef100_A7NZJ7 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1074930.1 length: 475 aa.
IPR001159 Double-stranded RNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003725 double-stranded RNA binding    
HMMPfam PF00035 dsrm 1.1e-10 2-68
88-153
HMMSmart SM00358 Double-stranded 1e-17 2-69
88-154
ProfileScan PS50137 DS_RBD 10.120 1-70
87-155
IPR014720 Double-stranded RNA-binding-like domain
Gene3D G3DSA:3.30.160.20 no description 1.1e-15 2-68
88-154
no_ID  
HMMPanther PTHR32503 FAMILY 1.1e-182 2-369
HMMPanther PTHR32503:SF0 SUBFAMILY 1.1e-182 2-369
Seg seg seg NA 207-226
332-338
343-355
360-371
superfamily SSF54768 dsRNA-binding 2.6e-16 2-68
88-153
Wolf-PSORT
Lj3g3v1074930.1	cyto 7, chlo 5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1074930.1