Miyakogusa Predicted Gene

Lj3g3v1074930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1074930.1 tr|Q8GUQ0|Q8GUQ0_BRAOE DsRNA-binding protein
OS=Brassica oleracea var. acephala GN=lh PE=2
SV=1,39.38,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Double-stranded RNA binding motif,Double-stranded R,CUFF.42131.1
         (475 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g094490.1 | double-stranded RNA-binding motif protein | HC...   555   e-158
Medtr4g058990.1 | double-stranded RNA-binding motif protein | HC...   488   e-138
Medtr7g114310.1 | double-stranded RNA-binding motif protein | HC...   250   2e-66
Medtr6g028020.2 | double-stranded RNA-binding motif protein | LC...   128   1e-29
Medtr6g028020.1 | double-stranded RNA-binding motif protein | LC...   128   1e-29
Medtr6g028020.3 | double-stranded RNA-binding motif protein | LC...   128   1e-29
Medtr3g079700.1 | double-stranded RNA-binding motif protein | LC...    99   8e-21
Medtr3g100120.1 | double-stranded RNA-binding motif protein | LC...    95   1e-19
Medtr3g100120.2 | double-stranded RNA-binding motif protein | LC...    95   2e-19
Medtr3g079720.1 | double-stranded RNA-binding motif protein | LC...    93   7e-19
Medtr3g079670.1 | double-stranded RNA-binding motif protein | HC...    93   7e-19
Medtr3g079650.1 | double-stranded RNA-binding motif protein | LC...    83   7e-16
Medtr5g079490.1 | double-stranded RNA-binding motif protein | LC...    62   8e-10
Medtr4g007820.1 | double-stranded RNA-binding motif protein | HC...    60   5e-09
Medtr4g007820.2 | double-stranded RNA-binding motif protein | HC...    60   5e-09
Medtr6g092600.1 | double-stranded RNA-binding motif protein | LC...    50   4e-06
Medtr8g045010.1 | double-stranded RNA-binding motif protein | LC...    50   5e-06

>Medtr2g094490.1 | double-stranded RNA-binding motif protein | HC |
           chr2:40288473-40292848 | 20130731
          Length = 408

 Score =  555 bits (1431), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/411 (71%), Positives = 317/411 (77%), Gaps = 18/411 (4%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYC+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV L+SLSHRGPS SLAAKILDETGVYKNLLQEIAQRVGAPLPQYTT+RSGLGHLPVFT
Sbjct: 61  AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKN+AMAAWSSLKQLAKETASSS+EPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMAMSDPNAPIPFQKKFXXXXXXXXXXXXXXXXXXXXLPLICQKAAPRSRP 240
           ALLNYRLKEKM+MS+PNA IPFQKKF                    LPLICQK  PR+R 
Sbjct: 181 ALLNYRLKEKMSMSNPNARIPFQKKF-QIQNIRPTSSQSPATTSKILPLICQKTGPRNR- 238

Query: 241 SLVTANDSVRSKPSFATANDNPRSKYPPAAATSDRSGV-PPQSSALESRVFRPLKFPAAG 299
                       PS AT N+NPRS++P AAATSD+S +  PQSSA+ESRV RPL+FPAAG
Sbjct: 239 ------------PSSATPNENPRSRHPQAAATSDKSILQQPQSSAIESRVTRPLRFPAAG 286

Query: 300 AAPYVPLRQMRSPCHGVAPPVTVRNMVPVFSAXXXXXXXTVHQXXXXXXXXXXXXXNIRQ 359
           A PYVP+RQMR PCHG+AP V+VR ++PVFSA       +VHQ             +IRQ
Sbjct: 287 APPYVPIRQMR-PCHGIAPAVSVRTVIPVFSAPPLPPPTSVHQIIRAPPVRIAPPVSIRQ 345

Query: 360 XXXXXXXXXXXXRKDEPSLIQKDLSTISIPCQQDILPHKIQETGKAENSLP 410
                       RKDEP+ IQKDL   S P +QD LP KI E  K EN+ P
Sbjct: 346 --AVPVFAAPPLRKDEPAPIQKDLPASSTPVEQDKLPAKILEMDKTENNSP 394



 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 5/70 (7%)

Query: 410 PVNFQQAIPVYAAPPTRIDEPSLIQKEELPTISTPGQQDKLPPRVQETE----NSPSESE 465
           PV+ +QA+PV+AAPP R DEP+ IQK +LP  STP +QDKLP ++ E +    NSP + E
Sbjct: 340 PVSIRQAVPVFAAPPLRKDEPAPIQK-DLPASSTPVEQDKLPAKILEMDKTENNSPPQPE 398

Query: 466 TVRNLEKLKI 475
           T+++LE+LKI
Sbjct: 399 TLQSLEQLKI 408


>Medtr4g058990.1 | double-stranded RNA-binding motif protein | HC |
           chr4:21760281-21755984 | 20130731
          Length = 473

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 291/509 (57%), Positives = 323/509 (63%), Gaps = 70/509 (13%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESP YC TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCTTLRQAEHSA 60

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV LSSLSHRGPS SLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALSSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180
           G VELAGITFTGE AKNKKQAEKN+AMAAWSSLKQLAKETASSS+EPENNDELEQITIAR
Sbjct: 121 GTVELAGITFTGEHAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMAMSDPNAPIPFQKKFXXXXXXXXXXXXXXXXXXXXLPLICQKAAPRSRP 240
           ALLNYRLKEKMAMS+PNA I F  KF                    LPLICQK APRSR 
Sbjct: 181 ALLNYRLKEKMAMSNPNAMISFPMKF-QFQNPRPTSPQPRPATSKILPLICQKTAPRSR- 238

Query: 241 SLVTANDSVRSKPSFATANDNPRSKYPPAAATSDRSGV-PPQSSALESRVFRPLKFPAAG 299
                               +P +    A+A+SD S +  P SS  ESR  R  KFPAAG
Sbjct: 239 --------------------HPAT----ASASSDHSSIMSPFSSTPESRWTRRPKFPAAG 274

Query: 300 AAPYVPLRQMRSPCHGVAPPVTVRNMVPVFSAXXXXXXXTVHQXXXXXXXXXXXXXNIRQ 359
           AAPYVP+R MRS C GVAPPVTVRN +PVFS         V +             NIRQ
Sbjct: 275 AAPYVPIRHMRSSCQGVAPPVTVRNAIPVFSPPPAAVSPQVMR---PLPVRVAPPINIRQ 331

Query: 360 XXXXXXXXXXXXRKDEPSLIQK-DLSTI---SIPCQQD---------------------- 393
                       RKDEP  I K DL+ +   + P + D                      
Sbjct: 332 -VVPVYASAPPVRKDEPIPISKNDLAQVLNAATPLRVDEPVPISKVDPAPVVYAAPPVII 390

Query: 394 ---ILPHKIQETGKAENSLPVNFQQAIPVY----AAPPTRIDEPSLIQKEELPTISTPGQ 446
              +   K+  +     +LP+   + +P+     AA   +IDE  L+ K++    S   +
Sbjct: 391 DEPVTVSKVDPSPAENAALPIPVDEPVPISKDDPAASAVKIDETVLVSKDDPAPTSDSDK 450

Query: 447 QDKLPPRVQETENSPSESETVRNLEKLKI 475
            D       +TEN P+ SETV+ LE+LKI
Sbjct: 451 TDT------KTENIPAGSETVQRLEQLKI 473


>Medtr7g114310.1 | double-stranded RNA-binding motif protein | HC |
           chr7:47187253-47183014 | 20130731
          Length = 505

 Score =  250 bits (638), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 112/157 (71%), Positives = 137/157 (87%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           MYKN+LQELAQRSCFNLP+Y+CIREGPDHAPRFK TVNFNGE FESP +C+TLRQAEH+A
Sbjct: 1   MYKNRLQELAQRSCFNLPAYSCIREGPDHAPRFKVTVNFNGETFESPTFCSTLRQAEHAA 60

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV L++L+ RGPSR+LAA++LDETGVYKNLLQE A R G  LP Y T R+G GH+P F 
Sbjct: 61  AEVALNTLATRGPSRTLAARVLDETGVYKNLLQETAHRAGLNLPVYRTIRAGPGHVPNFY 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLA 157
             VE+AG+ FTG+PA+ KKQA+KN+A+AAWS+L++L+
Sbjct: 121 CTVEIAGMHFTGDPARTKKQAQKNAAIAAWSALRKLS 157


>Medtr6g028020.2 | double-stranded RNA-binding motif protein | LC |
           chr6:9916610-9922373 | 20130731
          Length = 503

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 12/166 (7%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           +YK+QLQ  AQ+    LP Y    EGP H  RF+  V  +G+ FESP + +TLR AE++A
Sbjct: 132 LYKSQLQNYAQKRNLKLPEYAPEWEGPPHNMRFRCKVTIDGQTFESPRFYSTLRDAEYAA 191

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGV--YKNLLQEIAQRVG-APLPQYTTFRSGLGHLP 117
           AEV   SL   G         + E G+  YKNLLQE+ Q+ G   LP Y+T +SG  H P
Sbjct: 192 AEVAFKSLQPAG---------VQEEGILMYKNLLQELIQKGGLLQLPVYSTTKSGEAHRP 242

Query: 118 VFTGIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASS 163
            FT  VE+ G  +TGE +K KKQAE ++A  A+++LK+L      S
Sbjct: 243 TFTSQVEIEGKVYTGEESKTKKQAEMSAAKVAYTTLKELKAHGGQS 288


>Medtr6g028020.1 | double-stranded RNA-binding motif protein | LC |
           chr6:9910998-9922435 | 20130731
          Length = 529

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 12/166 (7%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           +YK+QLQ  AQ+    LP Y    EGP H  RF+  V  +G+ FESP + +TLR AE++A
Sbjct: 158 LYKSQLQNYAQKRNLKLPEYAPEWEGPPHNMRFRCKVTIDGQTFESPRFYSTLRDAEYAA 217

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGV--YKNLLQEIAQRVG-APLPQYTTFRSGLGHLP 117
           AEV   SL   G         + E G+  YKNLLQE+ Q+ G   LP Y+T +SG  H P
Sbjct: 218 AEVAFKSLQPAG---------VQEEGILMYKNLLQELIQKGGLLQLPVYSTTKSGEAHRP 268

Query: 118 VFTGIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASS 163
            FT  VE+ G  +TGE +K KKQAE ++A  A+++LK+L      S
Sbjct: 269 TFTSQVEIEGKVYTGEESKTKKQAEMSAAKVAYTTLKELKAHGGQS 314



 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 38/68 (55%)

Query: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
          MYK +LQEL Q++ + LP Y   REGP H  RF  TV  N   F SP    T++ ++ SA
Sbjct: 1  MYKTKLQELCQKNSYPLPEYQTTREGPPHNSRFSTTVTVNSISFSSPEPARTIKLSQDSA 60

Query: 61 AEVVLSSL 68
          A V    L
Sbjct: 61 AMVAFHHL 68


>Medtr6g028020.3 | double-stranded RNA-binding motif protein | LC |
           chr6:9910995-9922435 | 20130731
          Length = 528

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 12/166 (7%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           +YK+QLQ  AQ+    LP Y    EGP H  RF+  V  +G+ FESP + +TLR AE++A
Sbjct: 158 LYKSQLQNYAQKRNLKLPEYAPEWEGPPHNMRFRCKVTIDGQTFESPRFYSTLRDAEYAA 217

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGV--YKNLLQEIAQRVG-APLPQYTTFRSGLGHLP 117
           AEV   SL   G         + E G+  YKNLLQE+ Q+ G   LP Y+T +SG  H P
Sbjct: 218 AEVAFKSLQPAG---------VQEEGILMYKNLLQELIQKGGLLQLPVYSTTKSGEAHRP 268

Query: 118 VFTGIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASS 163
            FT  VE+ G  +TGE +K KKQAE ++A  A+++LK+L      S
Sbjct: 269 TFTSQVEIEGKVYTGEESKTKKQAEMSAAKVAYTTLKELKAHGGQS 314



 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 38/68 (55%)

Query: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
          MYK +LQEL Q++ + LP Y   REGP H  RF  TV  N   F SP    T++ ++ SA
Sbjct: 1  MYKTKLQELCQKNSYPLPEYQTTREGPPHNSRFSTTVTVNSISFSSPEPARTIKLSQDSA 60

Query: 61 AEVVLSSL 68
          A V    L
Sbjct: 61 AMVAFHHL 68


>Medtr3g079700.1 | double-stranded RNA-binding motif protein | LC |
           chr3:35967574-35973361 | 20130731
          Length = 714

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 9/186 (4%)

Query: 3   KNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAAE 62
           K QLQ  A+++  + P +T   EG  H  R+KA V  +G+ FESP + NT+ +AE + A+
Sbjct: 417 KKQLQNYARKNNLDPPVFTFKTEGLPHDFRYKAIVVIDGKSFESPTFLNTIEEAEQATAK 476

Query: 63  VVLSSLSHRGPSRSLAAKIL--DETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
             L  L        ++A +   DE+   K+LL E+ QR G   P Y T  SG  H+P + 
Sbjct: 477 FALRELP-------ISADLFQKDESCPSKSLLLELTQREGYSKPTYMTTESGSPHMPTYY 529

Query: 121 GIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180
             VE+ G+ F G+ +++KKQA+ ++A  A+ +LK+   +  ++ S     ++  Q T+  
Sbjct: 530 STVEVEGLKFHGKASRSKKQADIDAAKIAYIALKECGLDMYAAFSSSIKENQAAQSTLES 589

Query: 181 ALLNYR 186
            ++ Y+
Sbjct: 590 DIVKYK 595



 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 26/172 (15%)

Query: 3   KNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAAE 62
           K Q Q  AQ +  + P  T   EGP H   +KA+V  + + FESP + NT ++ E     
Sbjct: 114 KLQHQNYAQNNNLDSPVLTTEAEGPSHDVHYKASVVIDAKSFESPIFFNTKKEEEQ---- 169

Query: 63  VVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGI 122
                               +E+  YK+LLQE+ Q+ G   P Y T ++G  H+P F   
Sbjct: 170 --------------------EESRSYKSLLQELTQKKGFSKPTYKTTQTGSLHMPTFFSA 209

Query: 123 VELAGITFTGEPAKNKKQAEKNSAMAAWSSLK--QLAKETASSSSEPENNDE 172
           VE+ G+ F G  +++KK+AE+++A  A+ ++K  +L    A SSS  +N  E
Sbjct: 210 VEVEGVEFHGNASRSKKEAERDAAKIAYKAIKDGRLNMYAAFSSSIKKNQAE 261


>Medtr3g100120.1 | double-stranded RNA-binding motif protein | LC |
           chr3:46001282-45997216 | 20130731
          Length = 662

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 2/156 (1%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           ++K+QLQE AQ++    P Y   +EGP H P F++TV  N   ++S       + AE SA
Sbjct: 18  VFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYDSLAGFFNRKAAEQSA 77

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGL--GHLPV 118
           AEV L  L+  G       + + ETG+ KNLLQE AQ++   +P Y + +     G  P+
Sbjct: 78  AEVALMELAKTGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYQSKKDDTPPGRAPL 137

Query: 119 FTGIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLK 154
           ++  V++ G+ + G  AK K++AE  +A  A  +++
Sbjct: 138 YSCTVDIGGMLYIGGTAKTKREAEIKAARTALLAIQ 173


>Medtr3g100120.2 | double-stranded RNA-binding motif protein | LC |
           chr3:46001282-45997216 | 20130731
          Length = 660

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 2/152 (1%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           ++K+QLQE AQ++    P Y   +EGP H P F++TV  N   ++S       + AE SA
Sbjct: 16  VFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYDSLAGFFNRKAAEQSA 75

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGL--GHLPV 118
           AEV L  L+  G       + + ETG+ KNLLQE AQ++   +P Y + +     G  P+
Sbjct: 76  AEVALMELAKTGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYQSKKDDTPPGRAPL 135

Query: 119 FTGIVELAGITFTGEPAKNKKQAEKNSAMAAW 150
           ++  V++ G+ + G  AK K++AE  +A  A 
Sbjct: 136 YSCTVDIGGMLYIGGTAKTKREAEIKAARTAL 167


>Medtr3g079720.1 | double-stranded RNA-binding motif protein | LC |
           chr3:35977761-35980465 | 20130731
          Length = 390

 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 11/193 (5%)

Query: 3   KNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAAE 62
           K Q Q  A ++  + P +T   EGP    R+ ATV  +G+ F+SP   +T ++AE +A +
Sbjct: 115 KLQHQNYASKNNLDSPVFTIEAEGPPRDIRYNATVVVDGKSFKSPTSFDTRKEAEQAALQ 174

Query: 63  VVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGI 122
           +V             A   L+ET   K+LLQE+ QR    +P Y + R+G  H+P F   
Sbjct: 175 IV---------DMFQARSALNETCASKSLLQELTQRRYCSIPTYKSTRTGPPHMPTFFST 225

Query: 123 VELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASSSSEPENNDELEQITIARAL 182
           VE+ G+ F G+ + +KK+AE ++A  A+ +LK       ++ S     ++ EQ T    +
Sbjct: 226 VEVEGVEFHGKASSSKKEAEYDAAKIAYKALKDGGLHMYAAFSSSIKKNQAEQSTDESDI 285

Query: 183 LNYRLKEKMAMSD 195
           +  R K+K+ + D
Sbjct: 286 V--RSKQKLILED 296



 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 1  MYKNQLQELAQRSCFNLPSYTCIR-EGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHS 59
          MYK++LQE   R  ++LP Y+ I  +GP H P FK +V  NG  F S    ++ ++A + 
Sbjct: 1  MYKSRLQEFCHRRKWSLPEYSSIYVDGPPHNPSFKGSVFVNGLTFTSSDIFHSSKEAHNQ 60

Query: 60 AAEVVLSSLSH 70
          AA   L + S+
Sbjct: 61 AAMKALLNFSY 71


>Medtr3g079670.1 | double-stranded RNA-binding motif protein | HC |
           chr3:35955140-35957326 | 20130731
          Length = 372

 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 13/154 (8%)

Query: 7   QELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAAEVVLS 66
           Q  A+++  + P +T   EGP H  R+KA V  +G+ FESP   NT+++AE +AA+ V  
Sbjct: 113 QNCARKNDLDQPVFTIKTEGPPHDIRYKAIVVIDGKSFESPTSFNTIKEAEQAAAKFV-- 170

Query: 67  SLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGIVELA 126
                     +  K  DE    K+LLQE+++R G   P Y T + G  H+P F   VE+ 
Sbjct: 171 ---------GMFQK--DEPCPSKSLLQELSEREGFSKPTYKTTQIGPPHMPTFFSTVEVE 219

Query: 127 GITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKET 160
           GI F G+ +K+K +AE+++A  A+ +LK+    T
Sbjct: 220 GIGFHGKASKSKNKAEEDAAKIAYITLKECGSHT 253


>Medtr3g079650.1 | double-stranded RNA-binding motif protein | LC |
           chr3:35950333-35953425 | 20130731
          Length = 414

 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 9/176 (5%)

Query: 3   KNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAAE 62
           K  LQ  A+++  + P +T   E       +KATV  + + FESP + N++++AE +AA+
Sbjct: 114 KKHLQNYARKNNLDPPVFTIKTE----RLHYKATVVIDEKSFESPTFFNSIKEAEQAAAK 169

Query: 63  VVLSSLSHRGPSRSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGI 122
           + L  L     S  L  K  DE+   K+LL E+ QR G   P YTT  SG  H+  +   
Sbjct: 170 IALRELP---ISVDLFQK--DESCPSKSLLLELTQREGYSKPTYTTIESGSLHMRTYFST 224

Query: 123 VELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQLAKETASSSSEPENNDELEQITI 178
           VE+ G+ F G+ +++KKQA+ ++A  A+ +LK+   +  +  S     ++  Q T+
Sbjct: 225 VEVEGLKFHGKASRSKKQADIDAAKIAYIALKECGLDMYADFSSYNKENQAVQSTL 280



 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
          M+K +LQ+L  +  ++LP YT   +GP H P F A+V+ NG  F S    N+ ++A++ A
Sbjct: 1  MFKTKLQQLCHQRRWSLPKYTATNDGPQHKPSFNASVHVNGVTFASSDAFNSAKEAQNQA 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>Medtr5g079490.1 | double-stranded RNA-binding motif protein | LC |
           chr5:33978474-33982314 | 20130731
          Length = 357

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 4/154 (2%)

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
           M+KN L + A +S    P +    EG   AP ++++V  +G +F S       + AE   
Sbjct: 27  MFKNNLIQFALKSNMKHPEFFSRNEGSIQAPAYRSSVMVDGLVFTSQLTFFHRKAAEQEV 86

Query: 61  AEVVLSSLSHRGPSRSLAAKILDETGVY-KNLLQEIAQRVGAPLPQYTTFRSGLGHLPVF 119
           A   L  L+ +   +  A  I+ E   + K +L E A ++   LP Y +       +P F
Sbjct: 87  ARFALEYLTKK--VKDEAYSIMSEAVTFCKTVLNEYASKLSIQLPTYKSVEYK-EVIPYF 143

Query: 120 TGIVELAGITFTGEPAKNKKQAEKNSAMAAWSSL 153
              ++L G ++TG+ A+ KK A + +A AA  S+
Sbjct: 144 VCTLDLNGTSYTGDAARRKKDAVELAARAAILSI 177


>Medtr4g007820.1 | double-stranded RNA-binding motif protein | HC |
           chr4:1278710-1274464 | 20130731
          Length = 320

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 4/153 (2%)

Query: 2   YKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAA 61
           YKN L E A RS    P +    +G  HAP F++TV      F S       + AE   +
Sbjct: 28  YKNDLIEFALRSKMKSPEFFVRNKGSSHAPAFESTVMVGDLFFTSQLTFFHRKAAEQEVS 87

Query: 62  EVVLSSLSHRGPSRSLAAKILDETGVY-KNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
              L  L+ +   +  A  I+ E   + K +L + A ++   LP Y +    +  +P F 
Sbjct: 88  RFALEHLTKK--IKDEAYSIMSEAVTFCKAVLNDYASKLRIQLPTYNSVEY-IEVIPYFL 144

Query: 121 GIVELAGITFTGEPAKNKKQAEKNSAMAAWSSL 153
             ++L G ++TG  A+ K  AE+ +A AA  S+
Sbjct: 145 CTLDLNGTSYTGVAARRKNDAEELAARAAILSI 177


>Medtr4g007820.2 | double-stranded RNA-binding motif protein | HC |
           chr4:1278710-1274464 | 20130731
          Length = 320

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 4/153 (2%)

Query: 2   YKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSAA 61
           YKN L E A RS    P +    +G  HAP F++TV      F S       + AE   +
Sbjct: 28  YKNDLIEFALRSKMKSPEFFVRNKGSSHAPAFESTVMVGDLFFTSQLTFFHRKAAEQEVS 87

Query: 62  EVVLSSLSHRGPSRSLAAKILDETGVY-KNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
              L  L+ +   +  A  I+ E   + K +L + A ++   LP Y +    +  +P F 
Sbjct: 88  RFALEHLTKK--IKDEAYSIMSEAVTFCKAVLNDYASKLRIQLPTYNSVEY-IEVIPYFL 144

Query: 121 GIVELAGITFTGEPAKNKKQAEKNSAMAAWSSL 153
             ++L G ++TG  A+ K  AE+ +A AA  S+
Sbjct: 145 CTLDLNGTSYTGVAARRKNDAEELAARAAILSI 177


>Medtr6g092600.1 | double-stranded RNA-binding motif protein | LC
          | chr6:34873895-34873668 | 20130731
          Length = 75

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%)

Query: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60
          MY N+LQEL Q++ + LP Y    EGP H P F +TV      F SP   +TL+ ++   
Sbjct: 1  MYTNKLQELCQKNSYPLPEYQTTHEGPLHNPLFSSTVTVKSISFTSPEPASTLKASQEFV 60

Query: 61 AEVVL 65
          A V  
Sbjct: 61 AMVAF 65


>Medtr8g045010.1 | double-stranded RNA-binding motif protein | LC |
           chr8:17048494-17049253 | 20130731
          Length = 96

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 104 PQYTTFRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNSAMAAWSSLKQ 155
           P Y+T +SG  H P+F+  VE+ G  FTG+ AK+KK AE ++A  A+  L Q
Sbjct: 41  PVYSTNKSGEAHKPIFSSQVEIKGEIFTGQEAKSKKHAEMSAAKVAYKFLDQ 92