Miyakogusa Predicted Gene
- Lj3g3v1015380.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SG95_MEDTR |
697 |
79.7 |
86.7 |
(tr|I3SG95) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G78420.2 |
372 |
58.7 |
73.4 |
| Symbols: | RING/U-box superfamily protein | chr1:29505278-29507272 FORWARD LENGTH=401 |
| Medicago |
Medtr2g070630.2 |
697 |
79.7 |
86.7 |
| RING-type E3 ubiquitin ligase | HC | chr2:29772963-29779670 | 20130731 |
| Soybean |
Glyma13g33260.1 |
696 |
81.3 |
87.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1015380.1 |
length: 426 aa. |
| IPR001841 |
Zinc finger, RING-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| ProfileScan |
PS50089 |
ZF_RING_2 |
8.786 |
59-102 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
256-271 |
| superfamily |
SSF57850 |
RING/U-box |
1.3e-06 |
52-125 |
- Wolf-PSORT
Lj3g3v1015380.1 nucl 9, chlo 2.5, chlo_mito 2.5, mito 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1015380.1 |
|