Miyakogusa Predicted Gene
- Lj3g3v1015380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1015380.1 Non Characterized Hit- tr|K3X652|K3X652_PYTUL
Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G01,48,1e-18,seg,NULL; ZF_RING_2,Zinc finger, RING-type;
RING/U-box,NULL,CUFF.42015.1
(426 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g070630.2 | RING-type E3 ubiquitin ligase | HC | chr2:2977... 697 0.0
Medtr2g070630.1 | RING-type E3 ubiquitin ligase | HC | chr2:2977... 697 0.0
Medtr7g032010.1 | hypothetical protein | HC | chr7:11263742-1126... 125 9e-29
Medtr7g032020.1 | hypothetical protein | HC | chr7:11266093-1126... 115 1e-25
Medtr7g032100.1 | hypothetical protein | LC | chr7:11289674-1129... 115 1e-25
Medtr7g031960.1 | hypothetical protein | LC | chr7:11248270-1124... 105 6e-23
Medtr7g031970.1 | hypothetical protein | HC | chr7:11249746-1124... 103 5e-22
Medtr7g032110.1 | ubiquitin-protein ligase, putative | HC | chr7... 100 2e-21
>Medtr2g070630.2 | RING-type E3 ubiquitin ligase | HC |
chr2:29772963-29779670 | 20130731
Length = 426
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/429 (79%), Positives = 372/429 (86%), Gaps = 6/429 (1%)
Query: 1 MGNKLGRRRQVVDEKFTRPQGLYNHKDVDHKKLRKLILESKLAPCYPGDEESAYDREECP 60
MGNKLGRRRQVVDEK+TRPQGLYNHKDVD KKLRKLILESKLAPCYPGDEE+A DREECP
Sbjct: 1 MGNKLGRRRQVVDEKYTRPQGLYNHKDVDQKKLRKLILESKLAPCYPGDEETAVDREECP 60
Query: 61 ICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKG 120
ICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKG
Sbjct: 61 ICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKG 120
Query: 121 LEQIEEQRVIEAKIRMRQQELQDEEERVHKRLEISSASANVEVADVEYSSNAGATSSVSV 180
+EQIEEQRVIEAKIRMRQQELQDEEER+HKRLE+SS++ NV VADVEYSSNA A SS S
Sbjct: 121 MEQIEEQRVIEAKIRMRQQELQDEEERMHKRLEVSSSNVNVAVADVEYSSNAVAESSTSA 180
Query: 181 VERDEIVSSQDSCATPVVRSPAAVRTNREDEFDVDLEDIMVMEAIWLSIQENGRQRDLSF 240
+E DEIVSSQDSCATP+VR P A R NR+DEFDVDLEDIMVMEAIWLSIQENGRQR+LSF
Sbjct: 181 IEHDEIVSSQDSCATPMVRPPPATRANRDDEFDVDLEDIMVMEAIWLSIQENGRQRNLSF 240
Query: 241 ADASSGHFAANDRYAXX--XXXXXXXXXXXXXXGLACAIAALAERQQMAGETSMSSTNES 298
ADA+SGH+ A+DRYA GLACAIAALAERQQM+GE+S+SS NE+
Sbjct: 241 ADATSGHYVADDRYASSPMVQQAETSSSPSPSGGLACAIAALAERQQMSGESSVSSNNEN 300
Query: 299 MPSFNMLQGSRRFYNRLGRDVVSYPPTDNHNDVPPDDDGAMTRGHSEWDIDHGPQVVETA 358
SFNML GSRRFYNR+GRD+VSY PT+N ++ PPDD A TR H +W IDHG QV ETA
Sbjct: 301 T-SFNMLPGSRRFYNRIGRDMVSYSPTENLDEGPPDDTMATTRSHGQWSIDHGSQVAETA 359
Query: 359 TSYANSVAAEDRGEL-SLPRSDDIDGSLQNATATDPIVPESYEEQMMLAMAVSLAEARAM 417
TSYANSV EDRGEL S+ +S+D DGS Q +AT+PIVPES+EEQMMLAMAVSLAEARAM
Sbjct: 360 TSYANSVEGEDRGELSSMSQSNDNDGSFQ--SATEPIVPESFEEQMMLAMAVSLAEARAM 417
Query: 418 SSGHSASWQ 426
SG SASWQ
Sbjct: 418 PSGQSASWQ 426
>Medtr2g070630.1 | RING-type E3 ubiquitin ligase | HC |
chr2:29772966-29779670 | 20130731
Length = 426
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/429 (79%), Positives = 372/429 (86%), Gaps = 6/429 (1%)
Query: 1 MGNKLGRRRQVVDEKFTRPQGLYNHKDVDHKKLRKLILESKLAPCYPGDEESAYDREECP 60
MGNKLGRRRQVVDEK+TRPQGLYNHKDVD KKLRKLILESKLAPCYPGDEE+A DREECP
Sbjct: 1 MGNKLGRRRQVVDEKYTRPQGLYNHKDVDQKKLRKLILESKLAPCYPGDEETAVDREECP 60
Query: 61 ICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKG 120
ICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKG
Sbjct: 61 ICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKG 120
Query: 121 LEQIEEQRVIEAKIRMRQQELQDEEERVHKRLEISSASANVEVADVEYSSNAGATSSVSV 180
+EQIEEQRVIEAKIRMRQQELQDEEER+HKRLE+SS++ NV VADVEYSSNA A SS S
Sbjct: 121 MEQIEEQRVIEAKIRMRQQELQDEEERMHKRLEVSSSNVNVAVADVEYSSNAVAESSTSA 180
Query: 181 VERDEIVSSQDSCATPVVRSPAAVRTNREDEFDVDLEDIMVMEAIWLSIQENGRQRDLSF 240
+E DEIVSSQDSCATP+VR P A R NR+DEFDVDLEDIMVMEAIWLSIQENGRQR+LSF
Sbjct: 181 IEHDEIVSSQDSCATPMVRPPPATRANRDDEFDVDLEDIMVMEAIWLSIQENGRQRNLSF 240
Query: 241 ADASSGHFAANDRYAXX--XXXXXXXXXXXXXXGLACAIAALAERQQMAGETSMSSTNES 298
ADA+SGH+ A+DRYA GLACAIAALAERQQM+GE+S+SS NE+
Sbjct: 241 ADATSGHYVADDRYASSPMVQQAETSSSPSPSGGLACAIAALAERQQMSGESSVSSNNEN 300
Query: 299 MPSFNMLQGSRRFYNRLGRDVVSYPPTDNHNDVPPDDDGAMTRGHSEWDIDHGPQVVETA 358
SFNML GSRRFYNR+GRD+VSY PT+N ++ PPDD A TR H +W IDHG QV ETA
Sbjct: 301 T-SFNMLPGSRRFYNRIGRDMVSYSPTENLDEGPPDDTMATTRSHGQWSIDHGSQVAETA 359
Query: 359 TSYANSVAAEDRGEL-SLPRSDDIDGSLQNATATDPIVPESYEEQMMLAMAVSLAEARAM 417
TSYANSV EDRGEL S+ +S+D DGS Q +AT+PIVPES+EEQMMLAMAVSLAEARAM
Sbjct: 360 TSYANSVEGEDRGELSSMSQSNDNDGSFQ--SATEPIVPESFEEQMMLAMAVSLAEARAM 417
Query: 418 SSGHSASWQ 426
SG SASWQ
Sbjct: 418 PSGQSASWQ 426
>Medtr7g032010.1 | hypothetical protein | HC |
chr7:11263742-11264254 | 20130731
Length = 134
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 87/149 (58%), Gaps = 39/149 (26%)
Query: 273 LACAIAALAERQQMAGETSMSSTNESMPSFNMLQGSRRFYNRLGRDVVSYPPTDNHNDVP 332
LACAIA L E QM+ E+SM ++ P
Sbjct: 24 LACAIADLDEIHQMSVESSM------------------------------------DEGP 47
Query: 333 PDDDGAMTRGHSEWDIDHGPQVVETATSYANSVAAEDRGEL-SLPRSDDIDGSLQNATAT 391
PDD A TR H +W IDHG +V ETATSYANSV AEDRGEL S+ +S+DIDGS Q +AT
Sbjct: 48 PDDTLAKTRSHGQWSIDHGSRVAETATSYANSVEAEDRGELSSMSQSNDIDGSFQ--SAT 105
Query: 392 DPIVPESYEEQMMLAMAVSLAEARAMSSG 420
DPIVPESY E MMLAMAV + E RAMS G
Sbjct: 106 DPIVPESYAEHMMLAMAVFIVEGRAMSDG 134
>Medtr7g032020.1 | hypothetical protein | HC |
chr7:11266093-11264492 | 20130731
Length = 192
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 115/270 (42%), Gaps = 98/270 (36%)
Query: 160 NVEVADVEYSSNAGATSSVSVVERDEIVSSQDSCATPVVRSPAAVRTNREDEFDVDLEDI 219
NV VADVEYSSNA A S S++E DEIVS + P+ R ++ L +
Sbjct: 15 NVAVADVEYSSNAVAEFSTSIIEHDEIVSLK--TRVPIGR-------------EIYLWQM 59
Query: 220 MVMEAIWLSIQENGRQRDLSFADASSGHFAANDRYAXXXXXXXXXXXXXXXXGLACAIAA 279
++ G + A+DRYA
Sbjct: 60 LL-----------------------PGDYVADDRYAS----------------------- 73
Query: 280 LAERQQMAGETSMSSTNESMPSFNMLQGSR-----RFYNRLGRDVVSYPPTDNHNDVPPD 334
+ Q AG +S S P + S RFYNR+GRDVVSY +N ++ PP+
Sbjct: 74 -SPMGQQAGSSSSHLHRGSYPIMKIHHHSTCHRLLRFYNRIGRDVVSYSAAENLDECPPN 132
Query: 335 DDGAMTRGHSEWDIDHGPQVVETATSYANSVAAEDRGELSLPRSDDIDGSLQNATATDPI 394
D TR H +W I H QV ET TSYANSV
Sbjct: 133 DAMETTRSHGQWSISHRSQVAETTTSYANSV----------------------------- 163
Query: 395 VPESYEEQMMLAMAVSLAEARAMSSGHSAS 424
+S+EEQMMLAMAV LAEAR MSSG SAS
Sbjct: 164 --DSFEEQMMLAMAVYLAEARVMSSGQSAS 191
>Medtr7g032100.1 | hypothetical protein | LC |
chr7:11289674-11291046 | 20130731
Length = 135
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 273 LACAIAALAERQQMAGETSMSSTNESMPSFNMLQGSRRFYNRLGRDVVSYPPTDNHNDVP 332
LAC IAAL ERQQM+GE+S+ S NE+ SFNM GSRRFYNR+GRD+VSY +N ++
Sbjct: 42 LACVIAALDERQQMSGESSIRSNNENTSSFNMPPGSRRFYNRIGRDMVSYSAAENLDEGA 101
Query: 333 PDDDGAMTRGHSEWDIDHGPQVVETATSYANSVAAED 369
PDD T H +W I HG ET TSYANSV AED
Sbjct: 102 PDDAMETTSSHGQWSISHG---FETTTSYANSVDAED 135
>Medtr7g031960.1 | hypothetical protein | LC |
chr7:11248270-11249230 | 20130731
Length = 147
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 78/138 (56%), Gaps = 27/138 (19%)
Query: 289 ETSMSSTNESMPSFNMLQGSRRFYNRLGRDVVSYPPTDNHNDVPPDDDGAMTRGHSEWDI 348
E+S+ S NE+ SFNM G+RRFYNR+GRD+VSY N ++ PPDD T H +W
Sbjct: 36 ESSVRSNNENTSSFNMPPGTRRFYNRIGRDMVSYSAAKNLDEGPPDDVMETTSSHGQW-- 93
Query: 349 DHGPQVVETATSYANSVAAEDRGEL-SLPRSDDIDGSLQNATATDPIVPESYEEQMMLAM 407
EL SL S+D Q+A P+V ES+EEQMMLAM
Sbjct: 94 ----------------------SELSSLSHSNDNYERFQSAKG--PVVLESFEEQMMLAM 129
Query: 408 AVSLAEARAMSSGHSASW 425
AVSLAE R MSSG SASW
Sbjct: 130 AVSLAETRVMSSGPSASW 147
>Medtr7g031970.1 | hypothetical protein | HC |
chr7:11249746-11249498 | 20130731
Length = 82
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 332 PPDDDGAMTRGHSEWDIDHGPQVVETATSYANSVAAEDRGEL-SLPRSDDIDGSLQNATA 390
PPDD A TR H +W IDHG +V ETATS AN V AEDRGEL S+ +S+DIDGS Q +A
Sbjct: 5 PPDDTMATTRSHGQWSIDHGSRVAETATSNANFVEAEDRGELSSMSQSNDIDGSFQ--SA 62
Query: 391 TDPIVPESYEEQMMLAMA 408
TDPIVP+SYEE MMLA+A
Sbjct: 63 TDPIVPKSYEEHMMLALA 80
>Medtr7g032110.1 | ubiquitin-protein ligase, putative | HC |
chr7:11291715-11291452 | 20130731
Length = 87
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 64/88 (72%), Gaps = 10/88 (11%)
Query: 341 RGHS-------EWDIDHGPQVVETATSYANSVAAEDRGEL-SLPRSDDIDGSLQNATATD 392
RGH +W IDHG +V ETATSYANSV AEDR EL S+ +S+DIDGS Q+AT
Sbjct: 2 RGHQMILWQRRQWSIDHGSRVAETATSYANSVEAEDRDELSSMSQSNDIDGSFQSATY-- 59
Query: 393 PIVPESYEEQMMLAMAVSLAEARAMSSG 420
PIVPESYEE MML +AV +AE RAMS G
Sbjct: 60 PIVPESYEEHMMLDVAVFIAEGRAMSDG 87