Miyakogusa Predicted Gene

Lj3g3v0965940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MJ65_SOYBN 1196 72.0 78.3 (tr|I1MJ65) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G79090.2 608 50.7 63.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 1260 Blast hits to 1163 proteins in 186 species: Archae - 0; Bacteria - 32; Metazoa - 596; Fungi - 277; Plants - 212; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). | chr1:29749551-29752945 REVERSE LENGTH=793
Medicago Medtr2g069550.1 1120 70.4 77.8 | topoisomerase II-associated protein PAT1, putative | HC | chr2:28950076-28956943 | 20130731
Soybean Glyma15g40670.1 1196 72.0 78.3  
LJGI gnl|LJGI|TC77683 765 98.4 98.4 similar to UniRef100_A7PWT9 Cluster: Chromosome chr19 scaffold_35, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_35, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0965940.1 length: 820 aa.
IPR019167 Topoisomerase II-associated protein PAT1
method AccNumber shortName E-value location
HMMPfam PF09770 PAT1 1.3e-06 469-619
no_ID  
HMMPanther PTHR21551 TOPOISOMERASE 3.2e-140 1-811
Seg seg seg NA 36-52
54-68
69-80
164-174
247-261
658-672
Wolf-PSORT
Lj3g3v0965940.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0965940.1