Miyakogusa Predicted Gene
- Lj1g3v4969960.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SJJ0_LOTJA |
235 |
100.0 |
100.0 |
(tr|I3SJJ0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G39390.1 |
212 |
88.6 |
95.1 |
| Symbols: | Ribosomal L29 family protein | chr2:16450803-16451762 REVERSE LENGTH=123 |
| Medicago |
Medtr1g067490.1 |
219 |
94.1 |
99.2 |
| 60S ribosomal L35-like protein | HC | chr1:29111688-29109043 | 20130731 |
| Soybean |
Glyma13g40700.1 |
230 |
97.6 |
99.2 |
|
| LJGI |
gnl|LJGI|TC65274 |
737 |
100.0 |
100.0 |
homologue to UniRef100_Q9M5L0 Cluster: 60S ribosomal protein L35; n=1; Euphorbia esula|Rep: 60S ribosomal protein L35 - Euphorbia esula (Leafy spurge), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4969960.1 |
length: 123 aa. |
| IPR001854 |
Ribosomal protein L29 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| Gene3D |
G3DSA:1.10.287.310 |
no description |
3e-30 |
1-71 |
| HAMAP |
MF_00374 |
Ribosomal_L29 |
13.113 |
4-64 |
| HMMPfam |
PF00831 |
Ribosomal_L29 |
3.1e-18 |
7-64 |
| HMMTigr |
TIGR00012 |
L29: |
7.3e-19 |
8-64 |
| superfamily |
SSF46561 |
Ribosomal |
5.3e-16 |
2-65 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
7-35 |
| HMMPanther |
PTHR13872 |
60S |
2.6e-80 |
1-123 |
| HMMPanther |
PTHR13872:SF11 |
SUBFAMILY |
2.6e-80 |
1-123 |
- Wolf-PSORT
Lj1g3v4969960.1 nucl 10, cyto 2, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4969960.1 |
|