Miyakogusa Predicted Gene

Lj1g3v4969960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4969960.1 Non Chatacterized Hit- tr|I3SJJ0|I3SJJ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.37,0,Ribosomal_L29,Ribosomal protein L29; L29: ribosomal
protein L29,Ribosomal protein L29; coiled-coil,N,CUFF.33758.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39390.1 | Symbols:  | Ribosomal L29 family protein  | chr2:1...   212   4e-56
AT5G02610.1 | Symbols:  | Ribosomal L29 family protein  | chr5:5...   211   6e-56
AT3G09500.1 | Symbols:  | Ribosomal L29 family protein  | chr3:2...   210   2e-55
AT3G55170.2 | Symbols:  | Ribosomal L29 family protein  | chr3:2...   208   7e-55
AT3G55170.1 | Symbols:  | Ribosomal L29 family protein  | chr3:2...   208   7e-55
AT5G02610.2 | Symbols:  | Ribosomal L29 family protein  | chr5:5...   197   9e-52

>AT2G39390.1 | Symbols:  | Ribosomal L29 family protein  |
           chr2:16450803-16451762 REVERSE LENGTH=123
          Length = 123

 Score =  212 bits (540), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 109/123 (88%), Positives = 117/123 (95%)

Query: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR K+KA+L  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
           ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFP+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT5G02610.1 | Symbols:  | Ribosomal L29 family protein  |
           chr5:587611-588547 FORWARD LENGTH=123
          Length = 123

 Score =  211 bits (538), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 108/123 (87%), Positives = 118/123 (95%)

Query: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR+K+K +L +QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
           ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFP+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT3G09500.1 | Symbols:  | Ribosomal L29 family protein  |
           chr3:2917047-2917895 FORWARD LENGTH=123
          Length = 123

 Score =  210 bits (535), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/123 (87%), Positives = 118/123 (95%)

Query: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR K+K++L +QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
            SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFP+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT3G55170.2 | Symbols:  | Ribosomal L29 family protein  |
           chr3:20453136-20454293 REVERSE LENGTH=123
          Length = 123

 Score =  208 bits (529), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 106/123 (86%), Positives = 118/123 (95%)

Query: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR+K+K++L +QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
            SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKK++YFP+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT3G55170.1 | Symbols:  | Ribosomal L29 family protein  |
           chr3:20453136-20454293 REVERSE LENGTH=123
          Length = 123

 Score =  208 bits (529), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 106/123 (86%), Positives = 118/123 (95%)

Query: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR+K+K++L +QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
            SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKK++YFP+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT5G02610.2 | Symbols:  | Ribosomal L29 family protein  |
           chr5:587611-588547 FORWARD LENGTH=146
          Length = 146

 Score =  197 bits (502), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 118/146 (80%), Gaps = 23/146 (15%)

Query: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKI------------- 47
           MARIKV+ELR+K+K +L +QLK+ KAELALLRVAKVTGGAPNKLSKI             
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIRMDVDLAYDSNMY 60

Query: 48  ----------KVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTK 97
                     KVVR SIAQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTK
Sbjct: 61  LRSIKFGPCIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTK 120

Query: 98  HQASLKTEREKKKELYFPLRKYAVKV 123
           HQASLKTEREKKKE+YFP+RKYA+KV
Sbjct: 121 HQASLKTEREKKKEMYFPVRKYAIKV 146