Miyakogusa Predicted Gene

Lj1g3v4107110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KTT0_SOYBN 205 59.1 70.2 (tr|I1KTT0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G50390.1 156 49.7 68.2 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:20520789-20522980 REVERSE LENGTH=701
Medicago Medtr3g012530.1 178 55.4 66.7 | pentatricopeptide (PPR) repeat protein | HC | chr3:3530268-3532784 | 20130731
Soybean Glyma08g17040.1 201 73.8 84.9  
LJGI gnl|LJGI|TC78293 825 94.3 94.3 weakly similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4107110.1 length: 180 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.088 73-101
104-131
HMMTigr TIGR00756 PPR: 6e-05 39-71
ProfileScan PS51375 PPR 8.572 36-70
71-105
no_ID  
HMMPanther PTHR24015 FAMILY 3.2e-55 35-168
HMMPanther PTHR24015:SF151OS03G0849800 PROTEIN 3.2e-55 35-168
Wolf-PSORT
Lj1g3v4107110.1	cyto 9, chlo 3, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4107110.1