Miyakogusa Predicted Gene
- Lj1g3v4048430.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N8J0_SOYBN |
391 |
76.1 |
85.3 |
(tr|I1N8J0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G04200.1 |
313 |
61.0 |
76.4 |
| Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893-1154870 FORWARD LENGTH=325 |
| Medicago |
Medtr7g088035.1 |
384 |
75.2 |
86.2 |
| ICE-like protease (caspase) p20 domain protein | HC | chr7:34248766-34247292 | 20130731 |
| Soybean |
Glyma19g30180.1 |
391 |
76.1 |
85.3 |
|
| LJGI |
gnl|LJGI|TC79386 |
1431 |
99.2 |
99.2 |
similar to UniRef100_Q2HUG6 Cluster: Peptidase C14, caspase catalytic subunit p20; n=1; Medicago truncatula|Rep: Peptidase C14, caspase catalytic subunit p20 - Medicago truncatula (Barrel medic), partial (92%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4048430.1 |
length: 265 aa. |
| IPR011600 |
Peptidase C14, caspase catalytic |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004197 |
cysteine-type endopeptidase activity |
|
|
| Biological Process |
GO:0006508 |
proteolysis |
|
|
| HMMPfam |
PF00656 |
Peptidase_C14 |
1.3e-54 |
7-249 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1460 |
no description |
9.1e-61 |
5-253 |
| HMMPanther |
PTHR31810 |
FAMILY |
3.1e-93 |
4-252 |
| HMMPanther |
PTHR31810:SF0 |
SUBFAMILY |
3.1e-93 |
4-252 |
- Wolf-PSORT
Lj1g3v4048430.1 nucl 7, cyto 2, mito 2, chlo 1, plas 1, cysk 1, cyto_mito 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4048430.1 |
|