Miyakogusa Predicted Gene

Lj1g3v3404420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B2CZF7_LOTJA 813 97.5 97.5 (tr|B2CZF7) ARID/BRIGHT DNA binding domain containing protein OS=Lotus japonicus GN=SIP1 PE=2 SV=1
TAIR_pep AT1G76510.2 405 56.7 68.6 | Symbols: | ARID/BRIGHT DNA-binding domain-containing protein | chr1:28708927-28712498 REVERSE LENGTH=434
Medicago Medtr3g116200.1 505 68.6 75.5 | ARID/bright DNA-binding domain protein | HC | chr3:54329792-54323677 | 20130731
Soybean Glyma06g01640.1 585 77.4 81.9  
LJGI gnl|LJGI|TC66907 1731 100.0 100.0 similar to UniRef100_A7QPH7 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3404420.1 length: 408 aa.
IPR001606 ARID/BRIGHT DNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005622 intracellular    
Gene3D G3DSA:1.10.150.60G3DSA:1.10.150.60 T[120-218] 7.600000000336144E-29  
HMMPfam PF01388 ARID 2.7000000000000046E-23 126-212
HMMSmart SM00501 BRIGHT 1.1000015067164283E-35 126-217
ProfileScan PS51011 ARID 0.0 125-216
superfamily SSF46774 ARID 1.29999924468179E-30 108-227
no_ID  
HMMPanther PTHR15348 PTHR15348 7.799983041255708E-23 127-222
HMMPanther PTHR15348:SF0 PTHR15348:SF0 7.799983041255708E-23 127-222
HMMSmart SM01014 ARID 6.500008052301677E-30 122-212
Wolf-PSORT
Lj1g3v3404420.1	nucl 7, cyto 5, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3404420.1