| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LFQ1_SOYBN | 768 | 90.1 | 94.8 | (tr|K7LFQ1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT3G01150.1 | 623 | 77.5 | 84.8 | | Symbols: PTB, ATPTB1, PTB1 | polypyrimidine tract-binding protein 1 | chr3:51732-54344 FORWARD LENGTH=399 |
| Medicago | Medtr7g011070.1 | 721 | 85.1 | 89.2 | | polypyrimidine tract-binding-like protein | HC | chr7:2887135-2878353 | 20130731 |
| Soybean | Glyma09g37080.1 | 763 | 89.3 | 93.9 | |
| LJGI | gnl|LJGI|TC57645 | 1033 | 87.1 | 87.1 | similar to UniRef100_Q38JI2 Cluster: Polypyrimidine tract-binding-like; n=1; Solanum tuberosum|Rep: Polypyrimidine tract-binding-like - Solanum tuberosum (Potato), partial (81%) |
| Lj1g3v2979170.1 | length: 444 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 3.1e-08 | 21-71 |
| HMMSmart | SM00360 | RNA | 0.074 | 18-91 246-316 |
| ProfileScan | PS50102 | RRM | 8.603 | 17-95 242-322 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 2.5e-25 | 3-101 123-217 238-341 |
| no_ID | ||||
| HMMPanther | PTHR11546 | HETEROGENEOUS | 1.7e-155 | 1-367 |
| HMMPanther | PTHR11546:SF12 | PUTATIVE | 1.7e-155 | 1-367 |
| HMMPfam | PF13893 | RRM_5 | 4.6e-10 | 261-320 |
| Seg | seg | seg | NA | 408-428 |
| superfamily | SSF54928 | RNA-binding | 2.4e-08 | 2-109 238-346 92-201 |
Lj1g3v2979170.1 chlo 9, nucl 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v2979170.1 |