Miyakogusa Predicted Gene
- Lj1g3v2979170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2979170.1 Non Characterized Hit- tr|I1LDE8|I1LDE8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,29.62,7e-18,RNA-binding domain, RBD,NULL; seg,NULL; RNA
recognition motif,RNA recognition motif domain; RRM_5,NU,CUFF.29790.1
(444 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g011070.1 | polypyrimidine tract-binding-like protein | HC... 721 0.0
Medtr6g012590.1 | polypyrimidine tract-binding-like protein | HC... 649 0.0
Medtr3g090960.1 | polypyrimidine tract-binding-like protein | HC... 564 e-161
Medtr3g090960.2 | polypyrimidine tract-binding-like protein | HC... 564 e-161
Medtr1g028440.1 | polypyrimidine tract-binding-like protein | HC... 542 e-154
Medtr3g090960.3 | polypyrimidine tract-binding-like protein | HC... 343 3e-94
Medtr3g090960.4 | polypyrimidine tract-binding-like protein | HC... 343 3e-94
Medtr3g090960.5 | polypyrimidine tract-binding-like protein | HC... 343 3e-94
Medtr1g098530.2 | polypyrimidine tract-binding-like protein | HC... 169 4e-42
Medtr1g098530.1 | polypyrimidine tract-binding-like protein | HC... 169 4e-42
Medtr6g043520.1 | polypyrimidine tract-binding-like protein | HC... 157 3e-38
Medtr6g043520.2 | polypyrimidine tract-binding-like protein | HC... 157 3e-38
Medtr6g043520.3 | polypyrimidine tract-binding-like protein | HC... 157 3e-38
Medtr6g037550.1 | polypyrimidine tract-binding-like protein | HC... 131 1e-30
>Medtr7g011070.1 | polypyrimidine tract-binding-like protein | HC |
chr7:2887135-2878353 | 20130731
Length = 493
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/416 (85%), Positives = 371/416 (89%), Gaps = 18/416 (4%)
Query: 2 SSSSQPQFRYTQTPSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEF 61
SSS+ QFRYTQTPSKVLHLRNLPWECSEEEL+EL PFG+IVNTKCNVGANRNQAFVEF
Sbjct: 4 SSSNNHQFRYTQTPSKVLHLRNLPWECSEEELVELCSPFGRIVNTKCNVGANRNQAFVEF 63
Query: 62 ADLNQAISMVSYYASSSEPAQVRGKSVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA 121
D NQAISMVSYYASSSEPAQVRGK+VYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA
Sbjct: 64 VDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA 123
Query: 122 GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLP 181
GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQ+TDA+TA ARDALDGRSIPRYLLP
Sbjct: 124 GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLP 183
Query: 182 DHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPE 241
+HVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVN +AIEGA QPA+GPDGK+ E E
Sbjct: 184 EHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNHSAIEGAAQPAIGPDGKRIETE 243
Query: 242 SNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREA 301
SNVLLASIENMQYAVTVDV++TVFS+FGTVQKIA+FEKNGQTQALIQYPDV TAAAAREA
Sbjct: 244 SNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREA 303
Query: 302 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPDPSVLSSQVPATAWQNPQAAP 361
LEGHCIYDGGYCKLHL+YSRHTDLNVKAFSDKSRDYTVP VPA WQNPQAAP
Sbjct: 304 LEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP-------LVPAPVWQNPQAAP 356
Query: 362 MY-----------PGSGPAYQTQVPGGQMPSWDPTQQSFRPSYGSGGGAYPVQTGA 406
MY PG PAYQTQVPGGQ+PSWD TQ + RP Y GAYP QTGA
Sbjct: 357 MYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTGA 412
>Medtr6g012590.1 | polypyrimidine tract-binding-like protein | HC |
chr6:3847217-3842747 | 20130731
Length = 449
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/400 (78%), Positives = 346/400 (86%), Gaps = 11/400 (2%)
Query: 2 SSSSQPQFRYTQTPSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEF 61
SS Q QFR TQ PSKVLH RNLPWECS+EEL +L PFGK+++TKCNVG N+NQAFV+F
Sbjct: 3 SSKQQQQFRCTQIPSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFVQF 62
Query: 62 ADLNQAISMVSYYASSSEPAQVRGKSVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA 121
A+LNQAISMVSYYASSSEPAQVRGK+VYIQYSNRH IVN+ SPGDIPGNVLLVTIEGVEA
Sbjct: 63 AELNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHHIVNSNSPGDIPGNVLLVTIEGVEA 122
Query: 122 GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLP 181
GDVSIDVIHLVFSAFGFVHK+ATFEKTAGFQALIQYTDA+TA A+D+LDGRSIPRYLLP
Sbjct: 123 GDVSIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYLLP 182
Query: 182 DHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPE 241
+HVG+CNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVN AI+ A QPA+GPDGK+KE +
Sbjct: 183 EHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQPAIGPDGKRKEHK 242
Query: 242 SNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREA 301
SNVLLA+IENMQYAV +DVLH+VFS+FG VQK+A+F+KNG T ALIQYPD+ AAAA+E
Sbjct: 243 SNVLLATIENMQYAVPLDVLHSVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAKET 302
Query: 302 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPDPSVLSSQVPATAWQNPQAAP 361
LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTV DPS+ ++Q P AWQ QAA
Sbjct: 303 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVLDPSLHAAQAP--AWQTTQAAT 360
Query: 362 MYPGSGPAYQTQVPGGQMPSWDPTQQSFRPSYGSGGGAYP 401
MY GS GQMPSWDP QQ SY S G +P
Sbjct: 361 MYSGS---------MGQMPSWDPNQQEVTQSYLSAPGTFP 391
>Medtr3g090960.1 | polypyrimidine tract-binding-like protein | HC |
chr3:41318727-41325407 | 20130731
Length = 504
Score = 564 bits (1454), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/358 (74%), Positives = 307/358 (85%), Gaps = 7/358 (1%)
Query: 2 SSSSQPQFRYTQTPSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEF 61
S SSQ QFRYTQ PSKVLHLRNLPWEC+EEELIELG PFGK+VNTKCNVG+NRNQAF+EF
Sbjct: 3 SVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGNPFGKVVNTKCNVGSNRNQAFIEF 62
Query: 62 ADLNQAISMVSYYASSSEPAQVRGKSVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA 121
ADLNQAI+M+SYYASSSEPAQVRGK+VY+QYSNR EIV+NK+ D+ GNVLLVT+EG +A
Sbjct: 63 ADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVHNKTAADVAGNVLLVTVEGEDA 122
Query: 122 GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLP 181
VSIDV+HLVFSAFGFVHKI TFEKTAGFQAL+Q++DA+TA A+DALDGRSIPRYLL
Sbjct: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLS 182
Query: 182 DHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPE 241
+HVG C L+I+YS H DL +KFQS+RSRDYTNP LPV +AIEG GQ +G DGK+ E E
Sbjct: 183 EHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAE 242
Query: 242 SNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREA 301
SNVLLASIENMQYAVT+DVLH VFS+FG +QKIA+F+KNG QALIQYPD TA A+EA
Sbjct: 243 SNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEA 302
Query: 302 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVP-------DPSVLSSQVPAT 352
LEGHCIYDGG+CKLHL+YSRHTDL++K +D+SRDYT+P PS+L VP T
Sbjct: 303 LEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQPVPMT 360
>Medtr3g090960.2 | polypyrimidine tract-binding-like protein | HC |
chr3:41318636-41325138 | 20130731
Length = 504
Score = 564 bits (1454), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/358 (74%), Positives = 307/358 (85%), Gaps = 7/358 (1%)
Query: 2 SSSSQPQFRYTQTPSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEF 61
S SSQ QFRYTQ PSKVLHLRNLPWEC+EEELIELG PFGK+VNTKCNVG+NRNQAF+EF
Sbjct: 3 SVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGNPFGKVVNTKCNVGSNRNQAFIEF 62
Query: 62 ADLNQAISMVSYYASSSEPAQVRGKSVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA 121
ADLNQAI+M+SYYASSSEPAQVRGK+VY+QYSNR EIV+NK+ D+ GNVLLVT+EG +A
Sbjct: 63 ADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVHNKTAADVAGNVLLVTVEGEDA 122
Query: 122 GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLP 181
VSIDV+HLVFSAFGFVHKI TFEKTAGFQAL+Q++DA+TA A+DALDGRSIPRYLL
Sbjct: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLS 182
Query: 182 DHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPE 241
+HVG C L+I+YS H DL +KFQS+RSRDYTNP LPV +AIEG GQ +G DGK+ E E
Sbjct: 183 EHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAE 242
Query: 242 SNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREA 301
SNVLLASIENMQYAVT+DVLH VFS+FG +QKIA+F+KNG QALIQYPD TA A+EA
Sbjct: 243 SNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEA 302
Query: 302 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVP-------DPSVLSSQVPAT 352
LEGHCIYDGG+CKLHL+YSRHTDL++K +D+SRDYT+P PS+L VP T
Sbjct: 303 LEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQPVPMT 360
>Medtr1g028440.1 | polypyrimidine tract-binding-like protein | HC |
chr1:9601447-9594292 | 20130731
Length = 430
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/405 (69%), Positives = 327/405 (80%), Gaps = 11/405 (2%)
Query: 2 SSSSQPQFRYTQTPSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEF 61
S S+QPQFRYTQ PSKVLHLRNLPWEC EEELIELGKPFGK+VNTKCNVGANRNQAF+EF
Sbjct: 3 SVSTQPQFRYTQPPSKVLHLRNLPWECIEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
Query: 62 ADLNQAISMVSYYASSSEPAQVRGKSVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEA 121
AD+NQAI+M+SYYASSSEPAQVRGK+VY+QYSNR EIVNNK+ D+ GNVLLVTIEG +A
Sbjct: 63 ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGEDA 122
Query: 122 GDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLP 181
VSIDV+HLVFSAFGFVHKI TFEKTAGFQAL+Q++D +TA A+DALDGRSIP YLL
Sbjct: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDQETATSAKDALDGRSIPSYLLA 182
Query: 182 DHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPE 241
HVG C L+I+YS H DL++KFQS+RSRDYTNP LPV +A+EG+GQ +G DGK+ E E
Sbjct: 183 GHVGPCTLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQSVMGLDGKRLEAE 242
Query: 242 SNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREA 301
SNVLLASIENMQYAVT+DVLH VFSSFG +QKIA+F+KNG QAL+QYPDV TA A+EA
Sbjct: 243 SNVLLASIENMQYAVTLDVLHMVFSSFGPIQKIAMFDKNGGLQALVQYPDVQTAIVAKEA 302
Query: 302 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPD--PSVLSSQVPATAWQNPQA 359
LEGHCIYDGG+CKLHL+YSRHTDL++K +D+SRDYT+P P V++ Q P + Q Q
Sbjct: 303 LEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTMPTAPPPVMNVQ-PLVSGQ--QQ 359
Query: 360 APMYPGSGPAYQTQVPGGQMPSWDPTQQSFRPSYGSGGGAYPVQT 404
APM +GP Q P+ Q+F P G G P T
Sbjct: 360 APM---TGPPAQQYNTAQYAPN---NNQNFIPQNQPGWGTAPPHT 398
>Medtr3g090960.3 | polypyrimidine tract-binding-like protein | HC |
chr3:41318727-41325138 | 20130731
Length = 374
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 188/228 (82%), Gaps = 7/228 (3%)
Query: 132 VFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRI 191
VFSAFGFVHKI TFEKTAGFQAL+Q++DA+TA A+DALDGRSIPRYLL +HVG C L+I
Sbjct: 3 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 62
Query: 192 SYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPESNVLLASIEN 251
+YS H DL +KFQS+RSRDYTNP LPV +AIEG GQ +G DGK+ E ESNVLLASIEN
Sbjct: 63 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAESNVLLASIEN 122
Query: 252 MQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREALEGHCIYDGG 311
MQYAVT+DVLH VFS+FG +QKIA+F+KNG QALIQYPD TA A+EALEGHCIYDGG
Sbjct: 123 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEALEGHCIYDGG 182
Query: 312 YCKLHLTYSRHTDLNVKAFSDKSRDYTVP-------DPSVLSSQVPAT 352
+CKLHL+YSRHTDL++K +D+SRDYT+P PS+L VP T
Sbjct: 183 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQPVPMT 230
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDA 169
NVLL +IE ++ V++DV+H+VFSAFG + KIA F+K G QALIQY D TA A++A
Sbjct: 114 NVLLASIENMQYA-VTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEA 172
Query: 170 LDGRSIPRYLLPDHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQP 229
L+G I G C L +SYS H DL+IK ++RSRDYT PM+PV T GQP
Sbjct: 173 LEGHCI------YDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQP 226
>Medtr3g090960.4 | polypyrimidine tract-binding-like protein | HC |
chr3:41318636-41325325 | 20130731
Length = 374
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 188/228 (82%), Gaps = 7/228 (3%)
Query: 132 VFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRI 191
VFSAFGFVHKI TFEKTAGFQAL+Q++DA+TA A+DALDGRSIPRYLL +HVG C L+I
Sbjct: 3 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 62
Query: 192 SYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPESNVLLASIEN 251
+YS H DL +KFQS+RSRDYTNP LPV +AIEG GQ +G DGK+ E ESNVLLASIEN
Sbjct: 63 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAESNVLLASIEN 122
Query: 252 MQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREALEGHCIYDGG 311
MQYAVT+DVLH VFS+FG +QKIA+F+KNG QALIQYPD TA A+EALEGHCIYDGG
Sbjct: 123 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEALEGHCIYDGG 182
Query: 312 YCKLHLTYSRHTDLNVKAFSDKSRDYTVP-------DPSVLSSQVPAT 352
+CKLHL+YSRHTDL++K +D+SRDYT+P PS+L VP T
Sbjct: 183 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQPVPMT 230
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDA 169
NVLL +IE ++ V++DV+H+VFSAFG + KIA F+K G QALIQY D TA A++A
Sbjct: 114 NVLLASIENMQYA-VTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEA 172
Query: 170 LDGRSIPRYLLPDHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQP 229
L+G I G C L +SYS H DL+IK ++RSRDYT PM+PV T GQP
Sbjct: 173 LEGHCI------YDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQP 226
>Medtr3g090960.5 | polypyrimidine tract-binding-like protein | HC |
chr3:41318727-41325407 | 20130731
Length = 374
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 188/228 (82%), Gaps = 7/228 (3%)
Query: 132 VFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRI 191
VFSAFGFVHKI TFEKTAGFQAL+Q++DA+TA A+DALDGRSIPRYLL +HVG C L+I
Sbjct: 3 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 62
Query: 192 SYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPESNVLLASIEN 251
+YS H DL +KFQS+RSRDYTNP LPV +AIEG GQ +G DGK+ E ESNVLLASIEN
Sbjct: 63 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAESNVLLASIEN 122
Query: 252 MQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREALEGHCIYDGG 311
MQYAVT+DVLH VFS+FG +QKIA+F+KNG QALIQYPD TA A+EALEGHCIYDGG
Sbjct: 123 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEALEGHCIYDGG 182
Query: 312 YCKLHLTYSRHTDLNVKAFSDKSRDYTVP-------DPSVLSSQVPAT 352
+CKLHL+YSRHTDL++K +D+SRDYT+P PS+L VP T
Sbjct: 183 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQPVPMT 230
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDA 169
NVLL +IE ++ V++DV+H+VFSAFG + KIA F+K G QALIQY D TA A++A
Sbjct: 114 NVLLASIENMQYA-VTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEA 172
Query: 170 LDGRSIPRYLLPDHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQP 229
L+G I G C L +SYS H DL+IK ++RSRDYT PM+PV T GQP
Sbjct: 173 LEGHCI------YDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQP 226
>Medtr1g098530.2 | polypyrimidine tract-binding-like protein | HC |
chr1:44364881-44358462 | 20130731
Length = 443
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 184/347 (53%), Gaps = 53/347 (15%)
Query: 15 PSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYY 74
PSKV+H+RN+ E SE +L++L +PFG I TK + +NQA ++ D+ A+S + +Y
Sbjct: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALIQMQDVPSAVSALHFY 61
Query: 75 ASSSEPAQVRGKSVYIQYSNRHEIVN---NKSPGDIPGNVLLVTIEGVEAGDVSIDVIHL 131
+++P+ +RG++VY+Q+S+ E+ ++ GD P +LLVTI V +++DV++
Sbjct: 62 G-NTQPS-IRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILLVTIHHV-LYPITVDVLYQ 118
Query: 132 VFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRI 191
VFS G V KI TF+K+AGFQALIQY ++ AR AL GR+I + G C L I
Sbjct: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNI-------YDGCCQLDI 171
Query: 192 SYSAHRDLNIKFQSNRSRDYTNPMLPV---------------NLTAIEGAGQPAVG---- 232
+S +L + + ++RSRD+TNP LP N+ ++G+G VG
Sbjct: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQGSGPRTVGYPQM 231
Query: 233 --------------PDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFE 278
P G + LL S N + D L +FS +G + +I +
Sbjct: 232 PNAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNPD-RIDEDKLFNLFSLYGNIVRIKLL- 289
Query: 279 KNGQTQALIQYPDVITAAAAREALEGHCIYDGGYCKLHLTYSRHTDL 325
+N ALIQ D A A L+G ++D +L + +S+H ++
Sbjct: 290 RNKPDHALIQMGDGFQAELAVHFLKGAMLFDK---RLEVNFSKHPNI 333
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 132/283 (46%), Gaps = 54/283 (19%)
Query: 127 DVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGS 186
D++ L F FG + K+ A QALIQ D +A A G + P +
Sbjct: 21 DLLQL-FQPFGVITKLVMLR--AKNQALIQMQDVPSAVSALH-FYGNTQPS------IRG 70
Query: 187 CNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPESNVLL 246
N+ + +S+H++L QS G+ EP + +LL
Sbjct: 71 RNVYVQFSSHQELTTIDQS----------------------------QGRGDEP-NRILL 101
Query: 247 ASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREALEGHC 306
+I ++ Y +TVDVL+ VFS G+V+KI F+K+ QALIQY ++ AR AL+G
Sbjct: 102 VTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRN 161
Query: 307 IYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPD-PSVLSSQVPATAWQNPQAAPMY-- 363
IYD G C+L + +S +L V +D+SRD+T P+ P+ + P + + A MY
Sbjct: 162 IYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGD--AGNMYGV 218
Query: 364 PGSGPAYQTQVPGGQMPSWDPTQQSFRPSYGSGGGAYPVQTGA 406
GSGP V QMP+ +F GGG P TG
Sbjct: 219 QGSGPR---TVGYPQMPNAAAIAAAF------GGGLPPGITGT 252
>Medtr1g098530.1 | polypyrimidine tract-binding-like protein | HC |
chr1:44365128-44358462 | 20130731
Length = 443
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 184/347 (53%), Gaps = 53/347 (15%)
Query: 15 PSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYY 74
PSKV+H+RN+ E SE +L++L +PFG I TK + +NQA ++ D+ A+S + +Y
Sbjct: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALIQMQDVPSAVSALHFY 61
Query: 75 ASSSEPAQVRGKSVYIQYSNRHEIVN---NKSPGDIPGNVLLVTIEGVEAGDVSIDVIHL 131
+++P+ +RG++VY+Q+S+ E+ ++ GD P +LLVTI V +++DV++
Sbjct: 62 G-NTQPS-IRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILLVTIHHV-LYPITVDVLYQ 118
Query: 132 VFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRI 191
VFS G V KI TF+K+AGFQALIQY ++ AR AL GR+I + G C L I
Sbjct: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNI-------YDGCCQLDI 171
Query: 192 SYSAHRDLNIKFQSNRSRDYTNPMLPV---------------NLTAIEGAGQPAVG---- 232
+S +L + + ++RSRD+TNP LP N+ ++G+G VG
Sbjct: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQGSGPRTVGYPQM 231
Query: 233 --------------PDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFE 278
P G + LL S N + D L +FS +G + +I +
Sbjct: 232 PNAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNPD-RIDEDKLFNLFSLYGNIVRIKLL- 289
Query: 279 KNGQTQALIQYPDVITAAAAREALEGHCIYDGGYCKLHLTYSRHTDL 325
+N ALIQ D A A L+G ++D +L + +S+H ++
Sbjct: 290 RNKPDHALIQMGDGFQAELAVHFLKGAMLFDK---RLEVNFSKHPNI 333
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 132/283 (46%), Gaps = 54/283 (19%)
Query: 127 DVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGS 186
D++ L F FG + K+ A QALIQ D +A A G + P +
Sbjct: 21 DLLQL-FQPFGVITKLVMLR--AKNQALIQMQDVPSAVSALH-FYGNTQPS------IRG 70
Query: 187 CNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKEPESNVLL 246
N+ + +S+H++L QS G+ EP + +LL
Sbjct: 71 RNVYVQFSSHQELTTIDQS----------------------------QGRGDEP-NRILL 101
Query: 247 ASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAREALEGHC 306
+I ++ Y +TVDVL+ VFS G+V+KI F+K+ QALIQY ++ AR AL+G
Sbjct: 102 VTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRN 161
Query: 307 IYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPD-PSVLSSQVPATAWQNPQAAPMY-- 363
IYD G C+L + +S +L V +D+SRD+T P+ P+ + P + + A MY
Sbjct: 162 IYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGD--AGNMYGV 218
Query: 364 PGSGPAYQTQVPGGQMPSWDPTQQSFRPSYGSGGGAYPVQTGA 406
GSGP V QMP+ +F GGG P TG
Sbjct: 219 QGSGPR---TVGYPQMPNAAAIAAAF------GGGLPPGITGT 252
>Medtr6g043520.1 | polypyrimidine tract-binding-like protein | HC |
chr6:13313766-13323536 | 20130731
Length = 443
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 53/343 (15%)
Query: 16 SKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYA 75
SKV+H+RN+ E SE +L++L +PFG V TK + +NQA V+ D+ A S + +Y
Sbjct: 5 SKVIHVRNVGHEISENDLLQLFQPFG--VVTKLVMLRAKNQALVQMQDVASADSAIQFYI 62
Query: 76 SSSEPAQVRGKSVYIQYSNRHEIVN---NKSPGDIPGNVLLVTIEGVEAGDVSIDVIHLV 132
+S +P+ +RG++VY+Q+S+ E+ N+ D P +LLVT+ V +++DV+ V
Sbjct: 63 NS-QPS-IRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQV-LYPMTVDVLQQV 119
Query: 133 FSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRIS 192
FS GFV KI TF+K+AGFQALIQY +A AR AL GR++ + G C L I
Sbjct: 120 FSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNV-------YDGCCQLDIQ 172
Query: 193 YSAHRDLNIKFQSNRSRDYTNPMLPV---------------NLTAIEGAGQPAVG----- 232
+S +L + + ++RSRD+TNP LP N I+G+G G
Sbjct: 173 FSNLDELQVNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGNYGGIQGSGPRQAGFSQMG 232
Query: 233 -------------PDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEK 279
P G E +L + N + D L +FS +G + +I + +
Sbjct: 233 NAQAIEAAFGGDLPPGITGTNERCTILVTNLNPD-RIDEDKLFNLFSIYGNIVRIKLL-R 290
Query: 280 NGQTQALIQYPDVITAAAAREALEGHCIYDGGYCKLHLTYSRH 322
N AL+Q D A A L+G ++ L + +S+H
Sbjct: 291 NKPDHALVQMGDGFQAELAVHFLKGAMLFGK---HLDVNFSKH 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 54/222 (24%)
Query: 127 DVIHLVFSAFGFVHKIATFEKTAGFQALIQYTD---ADTAFQ----ARDALDGRSIPRYL 179
D++ L F FG V K+ A QAL+Q D AD+A Q ++ ++ GR
Sbjct: 21 DLLQL-FQPFGVVTKLVMLR--AKNQALVQMQDVASADSAIQFYINSQPSIRGR------ 71
Query: 180 LPDHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKE 239
N+ + +S+HR+L Q+ G++ E
Sbjct: 72 --------NVYVQFSSHRELTTMDQN----------------------------QGREDE 95
Query: 240 PESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAR 299
P + +LL ++ + Y +TVDVL VFS G V+KI F+K+ QALIQY +A AR
Sbjct: 96 P-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTAR 154
Query: 300 EALEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPD 341
AL+G +YD G C+L + +S +L V +D+SRD+T P+
Sbjct: 155 GALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPN 195
>Medtr6g043520.2 | polypyrimidine tract-binding-like protein | HC |
chr6:13313738-13323576 | 20130731
Length = 443
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 53/343 (15%)
Query: 16 SKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYA 75
SKV+H+RN+ E SE +L++L +PFG V TK + +NQA V+ D+ A S + +Y
Sbjct: 5 SKVIHVRNVGHEISENDLLQLFQPFG--VVTKLVMLRAKNQALVQMQDVASADSAIQFYI 62
Query: 76 SSSEPAQVRGKSVYIQYSNRHEIVN---NKSPGDIPGNVLLVTIEGVEAGDVSIDVIHLV 132
+S +P+ +RG++VY+Q+S+ E+ N+ D P +LLVT+ V +++DV+ V
Sbjct: 63 NS-QPS-IRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQV-LYPMTVDVLQQV 119
Query: 133 FSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRIS 192
FS GFV KI TF+K+AGFQALIQY +A AR AL GR++ + G C L I
Sbjct: 120 FSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNV-------YDGCCQLDIQ 172
Query: 193 YSAHRDLNIKFQSNRSRDYTNPMLPV---------------NLTAIEGAGQPAVG----- 232
+S +L + + ++RSRD+TNP LP N I+G+G G
Sbjct: 173 FSNLDELQVNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGNYGGIQGSGPRQAGFSQMG 232
Query: 233 -------------PDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEK 279
P G E +L + N + D L +FS +G + +I + +
Sbjct: 233 NAQAIEAAFGGDLPPGITGTNERCTILVTNLNPD-RIDEDKLFNLFSIYGNIVRIKLL-R 290
Query: 280 NGQTQALIQYPDVITAAAAREALEGHCIYDGGYCKLHLTYSRH 322
N AL+Q D A A L+G ++ L + +S+H
Sbjct: 291 NKPDHALVQMGDGFQAELAVHFLKGAMLFGK---HLDVNFSKH 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 54/222 (24%)
Query: 127 DVIHLVFSAFGFVHKIATFEKTAGFQALIQYTD---ADTAFQ----ARDALDGRSIPRYL 179
D++ L F FG V K+ A QAL+Q D AD+A Q ++ ++ GR
Sbjct: 21 DLLQL-FQPFGVVTKLVMLR--AKNQALVQMQDVASADSAIQFYINSQPSIRGR------ 71
Query: 180 LPDHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKE 239
N+ + +S+HR+L Q+ G++ E
Sbjct: 72 --------NVYVQFSSHRELTTMDQN----------------------------QGREDE 95
Query: 240 PESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAR 299
P + +LL ++ + Y +TVDVL VFS G V+KI F+K+ QALIQY +A AR
Sbjct: 96 P-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTAR 154
Query: 300 EALEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPD 341
AL+G +YD G C+L + +S +L V +D+SRD+T P+
Sbjct: 155 GALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPN 195
>Medtr6g043520.3 | polypyrimidine tract-binding-like protein | HC |
chr6:13313766-13323536 | 20130731
Length = 443
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 53/343 (15%)
Query: 16 SKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYA 75
SKV+H+RN+ E SE +L++L +PFG V TK + +NQA V+ D+ A S + +Y
Sbjct: 5 SKVIHVRNVGHEISENDLLQLFQPFG--VVTKLVMLRAKNQALVQMQDVASADSAIQFYI 62
Query: 76 SSSEPAQVRGKSVYIQYSNRHEIVN---NKSPGDIPGNVLLVTIEGVEAGDVSIDVIHLV 132
+S +P+ +RG++VY+Q+S+ E+ N+ D P +LLVT+ V +++DV+ V
Sbjct: 63 NS-QPS-IRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQV-LYPMTVDVLQQV 119
Query: 133 FSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRIS 192
FS GFV KI TF+K+AGFQALIQY +A AR AL GR++ + G C L I
Sbjct: 120 FSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNV-------YDGCCQLDIQ 172
Query: 193 YSAHRDLNIKFQSNRSRDYTNPMLPV---------------NLTAIEGAGQPAVG----- 232
+S +L + + ++RSRD+TNP LP N I+G+G G
Sbjct: 173 FSNLDELQVNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGNYGGIQGSGPRQAGFSQMG 232
Query: 233 -------------PDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEK 279
P G E +L + N + D L +FS +G + +I + +
Sbjct: 233 NAQAIEAAFGGDLPPGITGTNERCTILVTNLNPD-RIDEDKLFNLFSIYGNIVRIKLL-R 290
Query: 280 NGQTQALIQYPDVITAAAAREALEGHCIYDGGYCKLHLTYSRH 322
N AL+Q D A A L+G ++ L + +S+H
Sbjct: 291 NKPDHALVQMGDGFQAELAVHFLKGAMLFGK---HLDVNFSKH 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 54/222 (24%)
Query: 127 DVIHLVFSAFGFVHKIATFEKTAGFQALIQYTD---ADTAFQ----ARDALDGRSIPRYL 179
D++ L F FG V K+ A QAL+Q D AD+A Q ++ ++ GR
Sbjct: 21 DLLQL-FQPFGVVTKLVMLR--AKNQALVQMQDVASADSAIQFYINSQPSIRGR------ 71
Query: 180 LPDHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNLTAIEGAGQPAVGPDGKKKE 239
N+ + +S+HR+L Q+ G++ E
Sbjct: 72 --------NVYVQFSSHRELTTMDQN----------------------------QGREDE 95
Query: 240 PESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVITAAAAR 299
P + +LL ++ + Y +TVDVL VFS G V+KI F+K+ QALIQY +A AR
Sbjct: 96 P-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTAR 154
Query: 300 EALEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPD 341
AL+G +YD G C+L + +S +L V +D+SRD+T P+
Sbjct: 155 GALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPN 195
>Medtr6g037550.1 | polypyrimidine tract-binding-like protein | HC |
chr6:13376655-13370075 | 20130731
Length = 336
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 21/206 (10%)
Query: 15 PSKVLHLRNLPWECSEEELIELGKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYY 74
PSKV+H+RN+ E +E +L+ L +PFG I TK V +NQ ++ AI V +Y
Sbjct: 4 PSKVIHVRNVGPEIAENDLLLLFQPFGVI--TKLMVLRAKNQ------NIPSAIRAVEFY 55
Query: 75 ASSSEPAQVRGKSVYIQYSNRHEIVN-NKSPG--DIPGNVLLVTIEGVEAGDVSIDVIHL 131
A++ +P+ +RG+++Y+Q+S+ I + N+S G D P +LLVTI V +++DV+
Sbjct: 56 ANA-QPS-IRGRNLYVQFSSHRVITSANQSQGREDEPNRILLVTIHQV-LYPMTVDVLQQ 112
Query: 132 VFSAFGFVHKIATFEKTAGFQALIQYTDADTAFQARDALDGRSIPRYLLPDHVGSCNLRI 191
VFS G V KI TF+K+AGFQALIQY A AR AL GR++ + G C L I
Sbjct: 113 VFSRHGCVEKIVTFQKSAGFQALIQYETRQGAVTARGALQGRNV-------YDGCCQLDI 165
Query: 192 SYSAHRDLNIKFQSNRSRDYTNPMLP 217
+S +L + + ++ SRD+TNP LP
Sbjct: 166 QFSNLDELQVNYNNDWSRDFTNPNLP 191
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 235 GKKKEPESNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGQTQALIQYPDVIT 294
G++ EP + +LL +I + Y +TVDVL VFS G V+KI F+K+ QALIQY
Sbjct: 85 GREDEP-NRILLVTIHQVLYPMTVDVLQQVFSRHGCVEKIVTFQKSAGFQALIQYETRQG 143
Query: 295 AAAAREALEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVPDPSVLSSQVPATAW 354
A AR AL+G +YD G C+L + +S +L V +D SRD+T +P++ + Q ++
Sbjct: 144 AVTARGALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDWSRDFT--NPNLPTEQKGQSSQ 200
Query: 355 QNPQAAPMYP---GSGPAYQTQVPGGQMPSWDPTQQSFRPSYGSGGGAYP 401
A MY GSGP Q QM + + +F GG+ P
Sbjct: 201 SGSGDAGMYEGIQGSGP---RQAGSSQMGNAQAIEAAF-------GGSLP 240