database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | K7KIB7_SOYBN | 2362 | 71.5 | 82.0 | (tr|K7KIB7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT3G43920.2 | 1306 | 44.6 | 61.0 | | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:15753548-15760830 FORWARD LENGTH=1580 |
Medicago | Medtr3g105390.1 | 2299 | 68.9 | 78.8 | | endoribonuclease dicer-like protein | HC | chr3:48587251-48600607 | 20130731 |
Soybean | Glyma04g06060.1 | 1976 | 65.2 | 75.1 | |
LJGI | gnl|LJGI|DC598262 | 1003 | 99.2 | 99.2 | weakly similar to UniRef100_Q1KL58 Cluster: Dicer-like 2 spliceform 1; n=1; Arabidopsis thaliana|Rep: Dicer-like 2 spliceform 1 - Arabidopsis thaliana (Mouse-ear cress), partial (7%) |
Lj1g3v1788430.1 | length: 1668 aa. | |||
IPR000999 | Ribonuclease III domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003723 | RNA binding | ||
Molecular Function | GO:0004525 | ribonuclease III activity | ||
Biological Process | GO:0006396 | RNA processing | ||
Gene3D | G3DSA:1.10.1520.10 | no description | 2.8e-43 | 1164-1211 1237-1402 |
HMMPfam | PF00636 | Ribonuclease_3 | 1.5e-21 | 1062-1194 1274-1382 |
HMMSmart | SM00535 | Ribonuclease | 8.4e-34 | 1044-1217 1253-1406 |
PatternScan | PS00517 | RNASE_3_1 | NA | 1274-1282 |
ProfileScan | PS50142 | RNASE_3_2 | 34.636 | 1025-1197 1238-1383 |
superfamily | SSF69065 | RNase | 2.4e-32 | 1234-1411 1015-1215 |
IPR001159 | Double-stranded RNA-binding | |||
Molecular Function | GO:0003725 | double-stranded RNA binding | ||
ProfileScan | PS50137 | DS_RBD | 8.834 | 1454-1477 |
IPR001650 | Helicase, C-terminal | |||
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0004386 | helicase activity | ||
Molecular Function | GO:0005524 | ATP binding | ||
HMMPfam | PF00271 | Helicase_C | 3e-16 | 442-499 |
HMMSmart | SM00490 | helicase | 1.4e-15 | 408-503 |
ProfileScan | PS51194 | HELICASE_CTER | 14.034 | 393-541 |
IPR003100 | Argonaute/Dicer protein, PAZ | |||
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF02170 | PAZ | 1.5e-14 | 870-1021 |
HMMSmart | SM00949 | no description | 1e-06 | 865-1024 |
ProfileScan | PS50821 | PAZ | 19.426 | 888-1000 |
superfamily | SSF101690 | PAZ | 1.6e-14 | 886-1003 |
IPR005034 | Dicer double-stranded RNA-binding fold | |||
Molecular Function | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | ||
HMMPfam | PF03368 | dsRNA_bind | 2e-24 | 571-658 |
ProfileScan | PS51327 | DICER_DSRBF | 26.708 | 570-660 |
IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | |||
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0005524 | ATP binding | ||
Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
HMMPfam | PF00270 | DEAD | 2.4e-16 | 38-197 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
HMMSmart | SM00487 | DEAD-like | 6.7e-24 | 32-230 |
ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 20.846 | 43-217 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
superfamily | SSF52540 | P-loop | 3.8e-41 | 82-525 |
no_ID | ||||
Gene3D | G3DSA:2.170.260.10 | no description | 6.7e-10 | 887-1000 |
Gene3D | G3DSA:3.40.50.300 | no description | 1.6e-23 | 34-198 381-520 |
HMMPanther | PTHR14950 | HELICASE-RELATED | 0 | 1-1499 |
HMMPanther | PTHR14950:SF1 | HELICASE-RELATED | 0 | 1-1499 |
Seg | seg | seg | NA | 985-993 1035-1050 1326-1338 |
superfamily | SSF54768 | dsRNA-binding | 0.0016 | 1364-1509 1560-1666 |
Lj1g3v1788430.1 nucl 3.5, plas 3, E.R. 3, E.R._plas 3, cysk_nucl 2.5
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj1g3v1788430.1 |