Miyakogusa Predicted Gene
- Lj1g3v1788430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1788430.1 tr|G7J946|G7J946_MEDTR Endoribonuclease
Dicer-like protein OS=Medicago truncatula GN=MTR_3g105390
PE,70.4,0,HELICASE-RELATED,NULL; HELICASE_ATP_BIND_1,Helicase,
superfamily 1/2, ATP-binding domain; DEAD-like ,CUFF.27955.1
(5010 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598262 weakly similar to UniRef100_Q1KL58 Cluster: Di... 1003 0.0
gnl|LJGI|BP042852 weakly similar to UniRef100_A7P4V9 Cluster: Ch... 906 0.0
gnl|LJGI|TC77054 716 0.0
>gnl|LJGI|DC598262 weakly similar to UniRef100_Q1KL58 Cluster: Dicer-like 2 spliceform
1; n=1; Arabidopsis thaliana|Rep: Dicer-like 2
spliceform 1 - Arabidopsis thaliana (Mouse-ear cress),
partial (7%)
Length = 526
Score = 1003 bits (506), Expect = 0.0
Identities = 522/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 60 cacaaagccacaagatgacgattctcccacattcatcaacattgatcccagaaggtatca 119
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacaaagccacaaaatgacgattgtcccacattcatcaacattgatcccagaaggtatca 60
Query: 120 gaatgaggtatttcaagttgcaaggaagaggaacaccatagcagtgttggatacaggcac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatgaggtatttcaagttgcaaggaagaggaacaccatagcagtgttggatacaggcac 120
Query: 180 tgggaaaaccttgatagcaataatgcttataaaa-gacattgctcaagctatcaagtcta 238
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 tgggaaaaccttgatagcaataatgcttataaaaagacattgctcaagctatcaagtcta 180
Query: 239 gtggcaagaagaagttgattatagtcttggctccaatcgttcatcttgtacatcagctat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggcaagaagaagttgattatagtcttggctccaatcgttcatcttgtacatcagctat 240
Query: 299 acaatgatttgaagcatcataccggttttcaagttgaggagtactatgggagaggagttg 358
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 241 acaatgatttgaagcatcataccggttttcaaggtgaggagtactatgggagaggagttg 300
Query: 359 atgaatggaatttaaagacctgggagaaggaggtttctgaaaatgatgtgctggttatga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaatggaatttaaagacctgggagaaggaggtttctgaaaatgatgtgctggttatga 360
Query: 419 caccccagattctcttgaatgccttaactaaagcatttctgaaagtagaaatgataagct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caccccagattctcttgaatgccttaactaaagcatttctgaaagtagaaatgataagct 420
Query: 479 tgatggttatcgacgaatgtcataatgcaactggcaaccatccctatgcaagaataatga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgatggttatcgacgaatgtcataatgcaactggcaaccatccctatgcaagaataatga 480
Query: 539 aggaattttatcaccgagctaatgagaagccaatgatttttgggat 584
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggaattttatcaccgagctaatgagaagccaatgatttttgggat 526
>gnl|LJGI|BP042852 weakly similar to UniRef100_A7P4V9 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 465
Score = 906 bits (457), Expect = 0.0
Identities = 463/465 (99%)
Strand = Plus / Plus
Query: 1508 ctaactcccaatttattttgatgttggagaggggaaacttgaagcaaagaaatcaacact 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaactcccaatttattttgatgttggagaggggaaacttgaagcaaagaaatcaacact 60
Query: 1568 ttgagataatcaggactgagcgcttcatgactgatgcagctattaacaaagtccacgagt 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagataatcaggactgagcgcttcatgactgatgcagctattaacaaagtccacgagt 120
Query: 1628 ctaatttaagggcgtttacagtagggaacacaaatgcatatgtcgtggattccactggag 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctaatttaagggcgtttacagtagggaacacaaatgcatatgtcgtggattccactggag 180
Query: 1688 catcagtcagtctacattctagtttaagtcttattaatcaatattgcgaaaagctcccac 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcagtcagtctacattctagtttaagtcttattaatcaatattgcgaaaagctcccac 240
Query: 1748 gagttaggtactcttgtgtgaagccgacttttgagtctctgcctatggaggggtgttaca 1807
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagataagtactcttgtgtgaagccgacttttgagtctctgcctatggaggggtgttaca 300
Query: 1808 agtgtaaattaatattgccacctaatgcagctttccaaacaatagttggtccttcaggaa 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgtaaattaatattgccacctaatgcagctttccaaacaatagttggtccttcaggaa 360
Query: 1868 aaactgctcgtttggcaaagaatcttgtatgtttagaagcttgtaagaagctgcatcaaa 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaactgctcgtttggcaaagaatcttgtatgtttagaagcttgtaagaagctgcatcaaa 420
Query: 1928 tgggggccttaaatgatcatcttgtccccttcactgaagaacctt 1972
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgggggccttaaatgatcatcttgtccccttcactgaagaacctt 465
>gnl|LJGI|TC77054
Length = 504
Score = 716 bits (361), Expect = 0.0
Identities = 439/457 (96%), Gaps = 6/457 (1%)
Strand = Plus / Plus
Query: 4560 aagaatcaaattggatgaaactaacttaactgcaattccatctactggttgtttgcctgt 4619
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaatcaaattggatgagactaacttaactgcaattccatctactggttgtttgcctgt 60
Query: 4620 caatggctcttccagtgaagcctctgatgttattgcttcgactccagttatttcattaac 4679
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 ccatggctcttccagtgaagcctctgatgttattgcttcgactccagttatttcatttac 120
Query: 4680 tagtatgaagaagggagaaccccggagcaaactcaatgaactgtgcaagaaaatgcagtg 4739
|||||||||||||||||||||||||| | ||||||||||||||||| || |||| |||||
Sbjct: 121 tagtatgaagaagggagaaccccggacccaactcaatgaactgtgccagcaaattcagtg 180
Query: 4740 gccattgccttcttttgatccaacagagtataaagatagaagccaatttg-gatcctgtg 4798
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 181 gccattgccttcttttgatccaacagagtataaagatagaagcccatttgcgatcctgtg 240
Query: 4799 aagcgcttgaaggaagtaaaggacaaaact-gttttgtgtcgacaatcaccatgatcatg 4857
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 aagcgcttgaaggaagtaaaggacaaaactcgttttgtgtcgacaatcaccatgatcatg 300
Query: 4858 cctaatgagggtacaataga-atgcagagga-gaagctaggagtgataaaaagagctcat 4915
|||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 301 cctaatgagggtacgatagacatgcagaggacgaagctaggagtgataaaaagagctcat 360
Query: 4916 atgactctgctgcagttaaaatgcttcatgagctacaacga-ctgggaaaa-cttgagat 4973
|||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 361 atgactctgctgcagttacaatgcttcatgagctacaacgacctgggaaaagcttgagat 420
Query: 4974 tgataataatccccaacaatcttgtcctgtataatgc 5010
||||||||||||||||| |||||||||||||||||||
Sbjct: 421 tgataataatccccaaccatcttgtcctgtataatgc 457