Miyakogusa Predicted Gene

Lj1g3v1697900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T1U4_LOTJA 489 84.0 84.3 (tr|I3T1U4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G01360.2 237 49.0 64.3 | Symbols: | Family of unknown function (DUF716) | chr3:137772-138731 REVERSE LENGTH=319
Medicago Medtr7g034135.1 298 63.6 72.0 | transmembrane protein, putative | HC | chr7:12669895-12668408 | 20130731
Soybean Glyma16g05200.1 75.5 76.7 86.0  
LJGI gnl|LJGI|TC63749 1826 100.0 100.0 similar to UniRef100_Q9SLW7 Cluster: mRNA, 1290 bp sequence; n=1; Nicotiana tabacum|Rep: mRNA, 1290 bp sequence - Nicotiana tabacum (Common tobacco), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1697900.1 length: 306 aa.
IPR006904 Protein of unknown function DUF716, TMEM45
method AccNumber shortName E-value location
HMMPanther PTHR16007 EPIDIDYMAL 1.1e-24 82-286
HMMPfam PF04819 DUF716 1.8e-39 99-240
no_ID  
HMMPanther PTHR16007:SF5 SUBFAMILY 1.1e-24 82-286
Seg seg seg NA 3-19
40-62
83-103
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 25
43 63
71 93
100 121
133 155
169 191
222 244
Wolf-PSORT
Lj1g3v1697900.1	plas 5, E.R._vacu 4, vacu 3.5, E.R. 3.5, mito 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1697900.1