Miyakogusa Predicted Gene

Lj1g3v1697900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697900.1 Non Chatacterized Hit- tr|I1IK92|I1IK92_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,31.53,1e-16,seg,NULL; DUF716,Protein of unknown function DUF716,
TMEM45; SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL ME,CUFF.27693.1
         (306 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01360.2 | Symbols:  | Family of unknown function (DUF716)  |...   237   6e-63
AT3G01360.1 | Symbols:  | Family of unknown function (DUF716)  |...   237   6e-63
AT1G55230.1 | Symbols:  | Family of unknown function (DUF716)  |...    70   2e-12
AT5G19870.1 | Symbols:  | Family of unknown function (DUF716)  |...    67   1e-11
AT1G32120.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    62   4e-10
AT1G55240.1 | Symbols:  | Family of unknown function (DUF716)  |...    61   8e-10

>AT3G01360.2 | Symbols:  | Family of unknown function (DUF716)  |
           chr3:137772-138731 REVERSE LENGTH=319
          Length = 319

 Score =  237 bits (605), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 122/249 (48%), Positives = 160/249 (64%), Gaps = 21/249 (8%)

Query: 67  SNDAVGTALQFQVLAIXXXXXXXXXXXXXXXXX--------XXXXGMVVAFGFAEEFLLF 118
           S D VG+ +Q Q++A+                              +++ FGF EEFL+F
Sbjct: 81  SRDRVGSMIQLQIVAVAVLFLYYAILTYLVNSKNAVFVALPSSITTLLLLFGFIEEFLMF 140

Query: 119 YLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLSRGVGLNLQGTWFVQ 178
           YLQ+KD SG+ENRYYDL+LVPI +CVFSTV EL S   T+  AKL RG+GL LQGTWF+Q
Sbjct: 141 YLQKKDVSGIENRYYDLMLVPIAICVFSTVFELKSDSSTHRFAKLGRGIGLILQGTWFLQ 200

Query: 179 MGFSLFSNWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQFNCHLALMVMVMVASY 238
           MG S F+  +   C+ H  SRGN+T++CKGH +YHRA+AIATLQFNCHLALMV+V    +
Sbjct: 201 MGVSFFTGLITNNCTFHEKSRGNFTIKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLF 260

Query: 239 SVFCGRNGGPVHPEASRYTPLGAEMQSLENSATFTLDSDDED--IKDGNVGSQKGVVVVE 296
           SV   +N G +  + S+Y PLGAE   LEN +TFTLDSD+ED   ++ NV         E
Sbjct: 261 SVIANKN-GYLRQDHSKYRPLGAE---LENLSTFTLDSDEEDEVREESNVAK-------E 309

Query: 297 HGMNGNATN 305
            G+NGN+++
Sbjct: 310 VGLNGNSSH 318


>AT3G01360.1 | Symbols:  | Family of unknown function (DUF716)  |
           chr3:137772-138731 REVERSE LENGTH=319
          Length = 319

 Score =  237 bits (605), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 122/249 (48%), Positives = 160/249 (64%), Gaps = 21/249 (8%)

Query: 67  SNDAVGTALQFQVLAIXXXXXXXXXXXXXXXXX--------XXXXGMVVAFGFAEEFLLF 118
           S D VG+ +Q Q++A+                              +++ FGF EEFL+F
Sbjct: 81  SRDRVGSMIQLQIVAVAVLFLYYAILTYLVNSKNAVFVALPSSITTLLLLFGFIEEFLMF 140

Query: 119 YLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLSRGVGLNLQGTWFVQ 178
           YLQ+KD SG+ENRYYDL+LVPI +CVFSTV EL S   T+  AKL RG+GL LQGTWF+Q
Sbjct: 141 YLQKKDVSGIENRYYDLMLVPIAICVFSTVFELKSDSSTHRFAKLGRGIGLILQGTWFLQ 200

Query: 179 MGFSLFSNWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQFNCHLALMVMVMVASY 238
           MG S F+  +   C+ H  SRGN+T++CKGH +YHRA+AIATLQFNCHLALMV+V    +
Sbjct: 201 MGVSFFTGLITNNCTFHEKSRGNFTIKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLF 260

Query: 239 SVFCGRNGGPVHPEASRYTPLGAEMQSLENSATFTLDSDDED--IKDGNVGSQKGVVVVE 296
           SV   +N G +  + S+Y PLGAE   LEN +TFTLDSD+ED   ++ NV         E
Sbjct: 261 SVIANKN-GYLRQDHSKYRPLGAE---LENLSTFTLDSDEEDEVREESNVAK-------E 309

Query: 297 HGMNGNATN 305
            G+NGN+++
Sbjct: 310 VGLNGNSSH 318


>AT1G55230.1 | Symbols:  | Family of unknown function (DUF716)  |
           chr1:20602895-20603797 FORWARD LENGTH=300
          Length = 300

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           +V +  FA++  LF+L   D  G+E +Y+ LL + I V   +T++ +  +   + +    
Sbjct: 126 LVASSAFAQQLFLFHLHSADHMGIEGQYHKLLQLIIFVSFLTTLIGI--TLPKSFLVSFV 183

Query: 165 RGVGLNLQGTWFVQMGFSLFS-NWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           R   +  QG WFV MG+ L++ + + +GC LH    G+  ++C      HRA+++  ++F
Sbjct: 184 RSSSITFQGVWFVVMGYMLWTPSLIPKGCFLHE-EEGHQVIKCSSDKAIHRAKSLVNIEF 242

Query: 224 NCHLALMVMVMVASYSVFCGRNG 246
           +     + + +++ + +  G  G
Sbjct: 243 SWFFVGITIFVMSLFLILSGLYG 265


>AT5G19870.1 | Symbols:  | Family of unknown function (DUF716)  |
           chr5:6716182-6717012 REVERSE LENGTH=276
          Length = 276

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 5/144 (3%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           ++ A  FA++  LF+    D +GVE  Y+ LL + + V + +T+L +  +  ++ +    
Sbjct: 125 LIAALAFAQQLFLFHFHSSDHTGVEGHYHLLLQLVVFVSLVTTLLGI--ALPSSFILSFV 182

Query: 165 RGVGLNLQGTWFVQMGFSLFS-NWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           R + ++ QG W + M   L++ + V + C LH +  G +T+RC      HRA ++  +QF
Sbjct: 183 RSLSVSFQGIWLMSMACMLWTPSLVPKDCFLH-IEEGKHTIRCSDVKALHRAISLVNIQF 241

Query: 224 NCHLALMVMVMVASYSVFCGRNGG 247
           +  L ++ +  +  Y +F  R  G
Sbjct: 242 SWFLVIITIFAMWFY-IFLQRIYG 264


>AT1G32120.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
            INVOLVED IN: biological_process unknown; LOCATED IN:
            membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
            DURING: 4 anthesis, C globular stage, F mature embryo
            stage, petal differentiation and expansion stage, E
            expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
            Aminotransferase-like, plant mobile domain
            (InterPro:IPR019557), Protein of unknown function DUF716
            (InterPro:IPR006904); BEST Arabidopsis thaliana protein
            match is: Aminotransferase-like, plant mobile domain
            family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
            to 9656 proteins in 576 species: Archae - 4; Bacteria -
            1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
            Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
            BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
          Length = 1206

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 105  MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
            ++ A  F  E LLF+       G+E  Y+ LL+  IG+CV S++   +    T+    L 
Sbjct: 1069 LIAATAFTAECLLFFFHSTSHKGLEGYYHLLLVFLIGLCVISSIAGAICP--TSFPVDLC 1126

Query: 165  RGVGLNLQGTWFVQMGFSLFSNWVAEGCSL 194
             G+ + LQG WF Q  F+L+   + +GCSL
Sbjct: 1127 NGIAMTLQGLWFYQTAFTLYGPMMPQGCSL 1156


>AT1G55240.1 | Symbols:  | Family of unknown function (DUF716)  |
           chr1:20605015-20606185 FORWARD LENGTH=311
          Length = 311

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 18/187 (9%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           +  A  F+++ LLF+    D  GVE +Y+ +L V I V + +T++ +   +  + +  L 
Sbjct: 126 LAAAAAFSQQLLLFHFHSTDHMGVEGQYHVILQVVIFVSLLTTIMGIFLPK--SFLVSLV 183

Query: 165 RGVGLNLQGTWFVQMGFSLFS-NWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           R   +  QG W + +G  L++ + + +GC +H   R +  ++C      HRA+++  L+F
Sbjct: 184 RSSSIAFQGVWLIVIGCMLYTPSLIPKGCYIHDEGR-HIIVKCSTEEALHRAKSLVNLEF 242

Query: 224 NCHLALMVMVMVASYSVFCGRNGGPVHPEASRYTPLGAEMQSLENSATFTLDSDDEDIKD 283
           +       + +V  Y +        V+ E   Y+ L    Q+ +         DDE+   
Sbjct: 243 SWLFVTNTLFVVTLYLIL-----DRVYGENVEYSSLTTNNQTYQ---------DDEEQHF 288

Query: 284 GNVGSQK 290
            +  +QK
Sbjct: 289 ESKSTQK 295