Miyakogusa Predicted Gene

Lj1g3v1697900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697900.1 Non Characterized Hit- tr|I1IK92|I1IK92_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,31.53,1e-16,seg,NULL; DUF716,Protein of unknown function DUF716,
TMEM45; SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL ME,CUFF.27693.1
         (306 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g034135.1 | transmembrane protein, putative | HC | chr7:12...   298   3e-81
Medtr1g112160.1 | T1.3 protein | HC | chr1:50718071-50718826 | 2...    70   4e-12
Medtr2g021690.1 | T1.3 protein | HC | chr2:7380379-7382066 | 201...    66   5e-11
Medtr8g071150.1 | transmembrane 45B-like protein | HC | chr8:301...    62   9e-10
Medtr8g071150.2 | transmembrane 45B-like protein | HC | chr8:301...    62   9e-10
Medtr5g027180.1 | transmembrane 45B-like protein | HC | chr5:112...    61   1e-09
Medtr5g027180.2 | transmembrane 45B-like protein | HC | chr5:112...    61   1e-09
Medtr4g068340.1 | T1.3 protein | HC | chr4:25626826-25625439 | 2...    50   2e-06
Medtr1g112150.1 | T1.3 protein | LC | chr1:50712643-50713536 | 2...    50   3e-06

>Medtr7g034135.1 | transmembrane protein, putative | HC |
           chr7:12669895-12668408 | 20130731
          Length = 301

 Score =  298 bits (764), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 159/250 (63%), Positives = 180/250 (72%), Gaps = 12/250 (4%)

Query: 63  DAHKSNDAVGTALQFQVLAIXXXXXX-XXXXXXXXXXXXXXXGMVVAFGFAEEFLLFYLQ 121
           +AH SNDAVG +LQ Q L I                       +V+ FGFAEEFLLFYLQ
Sbjct: 58  NAHTSNDAVGLSLQLQTLPISLLFLIHSLLSLLFPFLPSPLLNLVLLFGFAEEFLLFYLQ 117

Query: 122 RKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLSRGVGLNLQGTWFVQMGF 181
           RKDP+G+ENRYYDLLLVPI VCVF+TVLEL   +  +NV KL RG+GL LQGTWFVQMG 
Sbjct: 118 RKDPTGIENRYYDLLLVPIAVCVFATVLEL--GEYASNVTKLGRGIGLLLQGTWFVQMGL 175

Query: 182 SLF-SNWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQFNCHLALMVMVMVASYSV 240
           SLF  N+VAEGC LH VS GNY+LRCKGH EYHRARAIATLQFNCHLALMV+V+V  YS 
Sbjct: 176 SLFYKNFVAEGCDLHQVSMGNYSLRCKGHGEYHRARAIATLQFNCHLALMVIVLVGFYSF 235

Query: 241 FCGRNGGPVHPEAS-RYTPLGAEMQSLEN-SATFTLDSDDE--DIKDGNVGSQKGVVVVE 296
            CG+ G     E S RY PLGAEMQSLEN   TFTL+SDDE  +IKDGNVG+ K    V 
Sbjct: 236 VCGKVGNSAREEMSLRYKPLGAEMQSLENLDGTFTLESDDEVDEIKDGNVGNLK----VI 291

Query: 297 HGMNGNATNH 306
           +G+NGN+ NH
Sbjct: 292 NGVNGNSYNH 301


>Medtr1g112160.1 | T1.3 protein | HC | chr1:50718071-50718826 |
           20130731
          Length = 251

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           ++ A  FA++FLL +L  +D  G+E +Y+ LL V I +C  +T++ +      + +    
Sbjct: 72  LLAAIAFAQQFLLIHLHSRDHMGIEGQYHYLLQVLISICFVTTLMGI--GYPMSFLVSFV 129

Query: 165 RGVGLNLQGTWFVQMGFSLFS-NWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           R V +  QG W + MG  LF+  +  +GC    +    Y ++C      HRA ++  LQF
Sbjct: 130 RSVSITFQGLWLMFMGLMLFTPGFEPKGC-FTKLEGDQYVVKCSDEKALHRAVSLVNLQF 188

Query: 224 NCHLALMVMVMVASYSVFCGRNGGPV 249
           +  L  + +  V+ Y +     G  V
Sbjct: 189 SWFLIGVTVFAVSFYLIMAISYGEKV 214


>Medtr2g021690.1 | T1.3 protein | HC | chr2:7380379-7382066 |
           20130731
          Length = 318

 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 106 VVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLSR 165
           + +  F ++ LLF+L   D  G E +Y+ LL V + V + +T+L +    + + +    R
Sbjct: 125 LASMAFFQQLLLFHLHSADHMGPEGQYHLLLQVLVFVSLSTTLLGI--PMQKSFLVSFVR 182

Query: 166 GVGLNLQGTWFVQMGFSLFS-NWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQFN 224
            + +  QG W + MG+ L++ + +A+GC ++    G+  +RC      HRA ++  + F+
Sbjct: 183 SLSIFFQGLWLMVMGYMLWTPSLIAKGCFMNS-EEGHKVVRCSDEESLHRAVSLVNILFS 241

Query: 225 CHLALMVMVMVASYSVFCGRNGGPVHPEASRYTPLGAEMQSLENSATFTLDSDDEDIKDG 284
             + ++ +  V+ Y V     G        RY  LG E +  E+     L  D E  K  
Sbjct: 242 WLVIVVAVFGVSLYLVLTKYYGA----NKVRYFSLGIEDEEREDVE--KLSDDVESQKRN 295

Query: 285 NVGSQKGVV 293
            VG  K  +
Sbjct: 296 LVGKPKSFI 304


>Medtr8g071150.1 | transmembrane 45B-like protein | HC |
           chr8:30189066-30192021 | 20130731
          Length = 269

 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           ++ A  F  E+LLF        G+E  Y+ LL   IG+C+ S++   V    T     LS
Sbjct: 127 LIAATAFTAEYLLFNFHSATHKGLEGYYHVLLAFLIGLCILSSIAGAV--LPTCFPVDLS 184

Query: 165 RGVGLNLQGTWFVQMGFSLFSNWVAEGCSL 194
           +G+G+ LQG WF Q  F LF   +  GCS+
Sbjct: 185 KGIGITLQGIWFYQTAFVLFGPMLPSGCSM 214


>Medtr8g071150.2 | transmembrane 45B-like protein | HC |
           chr8:30189649-30192021 | 20130731
          Length = 269

 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           ++ A  F  E+LLF        G+E  Y+ LL   IG+C+ S++   V    T     LS
Sbjct: 127 LIAATAFTAEYLLFNFHSATHKGLEGYYHVLLAFLIGLCILSSIAGAV--LPTCFPVDLS 184

Query: 165 RGVGLNLQGTWFVQMGFSLFSNWVAEGCSL 194
           +G+G+ LQG WF Q  F LF   +  GCS+
Sbjct: 185 KGIGITLQGIWFYQTAFVLFGPMLPSGCSM 214


>Medtr5g027180.1 | transmembrane 45B-like protein | HC |
           chr5:11271754-11267763 | 20130731
          Length = 278

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNV-AKL 163
            + A  F+ E+LLF        G+E  Y+ LL+  IG+C+ S++     +   NN  A L
Sbjct: 127 FLAAMAFSAEYLLFSFHSTSHKGLEGYYHTLLVFQIGLCILSSI---AGALLPNNFPADL 183

Query: 164 SRGVGLNLQGTWFVQMGFSLFSNWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           S G+ L LQG WF Q  F L+   + +GC +      +  + C       R   +A  Q 
Sbjct: 184 SNGIALALQGIWFYQTAFVLYGPMLPDGCKIK-----DNKIMCNSVDSEIRGELLANFQL 238

Query: 224 NCHLALMVMVMVASY 238
              +  +++  VA+Y
Sbjct: 239 FVAILAVLVGTVAAY 253


>Medtr5g027180.2 | transmembrane 45B-like protein | HC |
           chr5:11270980-11267763 | 20130731
          Length = 278

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNV-AKL 163
            + A  F+ E+LLF        G+E  Y+ LL+  IG+C+ S++     +   NN  A L
Sbjct: 127 FLAAMAFSAEYLLFSFHSTSHKGLEGYYHTLLVFQIGLCILSSI---AGALLPNNFPADL 183

Query: 164 SRGVGLNLQGTWFVQMGFSLFSNWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           S G+ L LQG WF Q  F L+   + +GC +      +  + C       R   +A  Q 
Sbjct: 184 SNGIALALQGIWFYQTAFVLYGPMLPDGCKIK-----DNKIMCNSVDSEIRGELLANFQL 238

Query: 224 NCHLALMVMVMVASY 238
              +  +++  VA+Y
Sbjct: 239 FVAILAVLVGTVAAY 253


>Medtr4g068340.1 | T1.3 protein | HC | chr4:25626826-25625439 |
           20130731
          Length = 293

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 104 GMVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKL 163
            ++V+  F++E  L +    D  G E  Y+ LL + + V + +++   V     N    L
Sbjct: 120 AILVSSVFSQELFLLHFHSTDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVL 179

Query: 164 SRGVGLNLQGTWFVQMGFSLF-SNWVAEGCSLH----GVSRGNYTLRCKGHPEYHRARAI 218
           S  + L  QG WF+ MGF L+   +V EGC ++      S  +  + C       RA+ +
Sbjct: 180 S--ISLIFQGCWFINMGFMLYIPTFVPEGCVMNLARESASEIHGAVTCGSKEADFRAKGL 237

Query: 219 ATLQFNCHL-ALMVM 232
           A LQF+  L A+M+ 
Sbjct: 238 ANLQFSWILSAIMIF 252


>Medtr1g112150.1 | T1.3 protein | LC | chr1:50712643-50713536 |
           20130731
          Length = 297

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 105 MVVAFGFAEEFLLFYLQRKDPSGVENRYYDLLLVPIGVCVFSTVLELVSSQETNNVAKLS 164
           ++ A  F +EFLLF+L  +   G+E +Y+  L V I +  F+T++ +      + +    
Sbjct: 121 LLAAIAFGQEFLLFHLHSRSHMGIEGQYHYCLQVLIMIGFFTTLMGI--GFPKSFLVCFL 178

Query: 165 RGVGLNLQGTWFVQMGFSLFS-NWVAEGCSLHGVSRGNYTLRCKGHPEYHRARAIATLQF 223
           R V +  QG + + MG  L    +  +GC L         +RC      HRA ++  LQF
Sbjct: 179 RSVSMIFQGLFIMFMGLVLSRPGYQPKGCFLE-YEGDQLMIRCNDEKAMHRAISLVNLQF 237

Query: 224 NCHLALMVMVMVASYSV 240
           +     + + +V+ Y +
Sbjct: 238 SWFFIGITIFVVSFYLI 254