Miyakogusa Predicted Gene

Lj1g3v1454060.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JXP5_SOYBN 657 71.0 74.0 (tr|I1JXP5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G48860.2 464 64.3 74.1 | Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577

Medicago Medtr3g498775.1 641 68.5 73.0 | ripening-regulated protein | HC | chr3:45145070-45136608 | 20130731

Soybean Glyma04g37710.1 657 71.0 74.0

LJGI gnl|LJGI|TC66372 1608 100.0 100.0 similar to UniRef100_A7PHP9 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1454060.1 length: 492 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 206-255
262-286
290-328

HMMPanther PTHR31762 FAMILY 1.2e-137 1-492

Seg seg seg NA 16-25
53-67
72-80
85-116
147-163
304-320
468-479

Wolf-PSORT

Lj1g3v1454060.1 mito 9, chlo 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1454060.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JXP5_SOYBN	657	71.0	74.0	(tr\|I1JXP5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G48860.2	464	64.3	74.1	\| Symbols: \| unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). \| chr3:18117619-18121853 FORWARD LENGTH=577
Medicago	Medtr3g498775.1	641	68.5	73.0	\| ripening-regulated protein \| HC \| chr3:45145070-45136608 \| 20130731
Soybean	Glyma04g37710.1	657	71.0	74.0
LJGI	gnl\|LJGI\|TC66372	1608	100.0	100.0	similar to UniRef100_A7PHP9 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)

no_ID
Lj1g3v1454060.1				length: 492 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	206-255 262-286 290-328
HMMPanther	PTHR31762	FAMILY	1.2e-137	1-492
Seg	seg	seg	NA	16-25 53-67 72-80 85-116 147-163 304-320 468-479