Miyakogusa Predicted Gene

Lj1g3v1454060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1454060.1 Non Characterized Hit- tr|K3ZAB6|K3ZAB6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si023487,56.52,9e-18,coiled-coil,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.27346.1
         (492 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g498775.1 | ripening-regulated protein | HC | chr3:4514507...   641   0.0  
Medtr3g498775.2 | ripening-regulated protein | HC | chr3:4514507...   537   e-153
Medtr7g114220.1 | ripening-regulated protein | HC | chr7:4711704...   253   4e-67
Medtr1g117130.1 | transmembrane protein, putative | LC | chr1:52...    89   8e-18

>Medtr3g498775.1 | ripening-regulated protein | HC |
           chr3:45145070-45136608 | 20130731
          Length = 573

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/496 (68%), Positives = 362/496 (72%), Gaps = 8/496 (1%)

Query: 1   MDRRRNLSPVYTRQWXXXXXXXXXX-PAMSPAHPQSRLGPSSTGISTVKRTQNXXXXXXX 59
           MDRRR  SPVYTRQW           P MSPAHPQSRLGP+STG+ST+KRTQN       
Sbjct: 1   MDRRRTESPVYTRQWSGNSSSTGSSSPVMSPAHPQSRLGPTSTGLSTIKRTQNVAAKAAA 60

Query: 60  XXXXXXXXSQTAXXXXXXXXXLGFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAR 119
                   SQT            FR                                VAR
Sbjct: 61  QRLARVMASQTVDDDDDDDDL-DFRYSAPPPSALSSFSSNRNSSANANSIPPIS---VAR 116

Query: 120 PNRSPSPALGRNFVEHTPAVRSTSAGR---XXXXXXXXXXXXXXXXXTLRTPMLVPPIDP 176
           PNRSPSPALGRNFVEHT +VRS+SAGR                    T+RTPM VPPIDP
Sbjct: 117 PNRSPSPALGRNFVEHTQSVRSSSAGRPAVSVRSAAAAAPVVPPPKSTIRTPMAVPPIDP 176

Query: 177 PTNRSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQE 236
           PT R++EKRF PDITIRQLNSKDTGDQREASALRDELDMLQEEN+ +LEKLR AEEKRQE
Sbjct: 177 PTIRNKEKRFPPDITIRQLNSKDTGDQREASALRDELDMLQEENDALLEKLRLAEEKRQE 236

Query: 237 VEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERDEDVTALRVE 296
           VE R+RELEKQVASLGEGVSLEAKLLSRKEAALRQREAAL AAKQ++NERDED+TALRVE
Sbjct: 237 VETRSRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALMAAKQTRNERDEDLTALRVE 296

Query: 297 IQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVKHG 356
           IQNLKDD                 LR+MTQRMILT EEMEEVVLKRCWLARYWGL+VKHG
Sbjct: 297 IQNLKDDAAAAEEQRQEAEAEAKALRSMTQRMILTQEEMEEVVLKRCWLARYWGLSVKHG 356

Query: 357 ICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN 416
           ICADI+QSK+EHWSSLAPLPFELVISAGQKAKEESWNKS DG DRS+ VRD+NDLAGEGN
Sbjct: 357 ICADIAQSKYEHWSSLAPLPFELVISAGQKAKEESWNKSTDGSDRSQTVRDINDLAGEGN 416

Query: 417 IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYXXXXXXXXX 476
           IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNL+RQSVLDSK+PGDAKY         
Sbjct: 417 IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLIRQSVLDSKSPGDAKYSEAFELSEE 476

Query: 477 XXXDVLFKEAWLTYFW 492
              DVLFKEAWLTYFW
Sbjct: 477 EAEDVLFKEAWLTYFW 492


>Medtr3g498775.2 | ripening-regulated protein | HC |
           chr3:45145070-45136605 | 20130731
          Length = 405

 Score =  537 bits (1384), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/324 (82%), Positives = 284/324 (87%)

Query: 169 MLVPPIDPPTNRSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLR 228
           M VPPIDPPT R++EKRF PDITIRQLNSKDTGDQREASALRDELDMLQEEN+ +LEKLR
Sbjct: 1   MAVPPIDPPTIRNKEKRFPPDITIRQLNSKDTGDQREASALRDELDMLQEENDALLEKLR 60

Query: 229 QAEEKRQEVEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERDE 288
            AEEKRQEVE R+RELEKQVASLGEGVSLEAKLLSRKEAALRQREAAL AAKQ++NERDE
Sbjct: 61  LAEEKRQEVETRSRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALMAAKQTRNERDE 120

Query: 289 DVTALRVEIQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARY 348
           D+TALRVEIQNLKDD                 LR+MTQRMILT EEMEEVVLKRCWLARY
Sbjct: 121 DLTALRVEIQNLKDDAAAAEEQRQEAEAEAKALRSMTQRMILTQEEMEEVVLKRCWLARY 180

Query: 349 WGLAVKHGICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDL 408
           WGL+VKHGICADI+QSK+EHWSSLAPLPFELVISAGQKAKEESWNKS DG DRS+ VRD+
Sbjct: 181 WGLSVKHGICADIAQSKYEHWSSLAPLPFELVISAGQKAKEESWNKSTDGSDRSQTVRDI 240

Query: 409 NDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYX 468
           NDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNL+RQSVLDSK+PGDAKY 
Sbjct: 241 NDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLIRQSVLDSKSPGDAKYS 300

Query: 469 XXXXXXXXXXXDVLFKEAWLTYFW 492
                      DVLFKEAWLTYFW
Sbjct: 301 EAFELSEEEAEDVLFKEAWLTYFW 324


>Medtr7g114220.1 | ripening-regulated protein | HC |
           chr7:47117049-47128270 | 20130731
          Length = 637

 Score =  253 bits (645), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/325 (45%), Positives = 209/325 (64%), Gaps = 26/325 (8%)

Query: 171 VPPIDPPTNRSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQA 230
           +P  +  ++  +++R + D+   ++       QR  + L DELDMLQEEN+N+ EKLR A
Sbjct: 261 IPQTESISDGRKDRRLSLDLGSMKVRENLNPQQRSTTELEDELDMLQEENDNLHEKLRHA 320

Query: 231 EEKRQEVEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERD-ED 289
           +E+ +E E R R+LE+Q+A+LGEGV+L+A+L +RKE  L+QREAA+     S+N    + 
Sbjct: 321 DERCEEAEMRVRQLEQQIANLGEGVTLDARLSNRKE--LQQREAAM--GIHSKNHGGFQG 376

Query: 290 VTALRVEIQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYW 349
            T+L+   +                      L+ +TQRMILT EEMEEVVLKRCWLARYW
Sbjct: 377 GTSLQTNAE--------------EAISTLEKLQLITQRMILTSEEMEEVVLKRCWLARYW 422

Query: 350 GLAVKHGICADISQSKHEHWSSLAP-LPFELVISAGQKAKEESWNKSADGPDRSKLVRDL 408
            L V+HGI  +I+++K ++WS+ AP  P ++V++AG+KAK E+   + D  D  +  RDL
Sbjct: 423 NLCVRHGIHVEIAEAKSKYWSTFAPNNPVDVVLAAGEKAKVET---NLDLED-IEYQRDL 478

Query: 409 NDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDS-KAPGDAKY 467
           N+L+GEGNIE+ML VE GLREL SLKVE+A+ +ALAQHRRPNL++    D  K P + + 
Sbjct: 479 NELSGEGNIENMLFVEQGLRELTSLKVEEALAIALAQHRRPNLLKAGFSDDLKLPVEGQC 538

Query: 468 XXXXXXXXXXXXDVLFKEAWLTYFW 492
                       DV+FK+AWLTY W
Sbjct: 539 -DAFQLSQEEAQDVIFKQAWLTYIW 562


>Medtr1g117130.1 | transmembrane protein, putative | LC |
           chr1:52980452-52981375 | 20130731
          Length = 146

 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 59/85 (69%)

Query: 272 REAALKAAKQSQNERDEDVTALRVEIQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILT 331
           ++A LK+++ S++  D+++T+L+ E++N K +                 LR+MTQRMILT
Sbjct: 33  KKATLKSSRDSKDGVDKEITSLQAEVENAKVETEATVRQLNGVESEVKTLRSMTQRMILT 92

Query: 332 HEEMEEVVLKRCWLARYWGLAVKHG 356
            +EMEEVVLKRCWLARYWGLA K+G
Sbjct: 93  QKEMEEVVLKRCWLARYWGLATKYG 117