Miyakogusa Predicted Gene
- Lj1g3v1454060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1454060.1 Non Chatacterized Hit- tr|K3ZAB6|K3ZAB6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si023487,56.52,9e-18,coiled-coil,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.27346.1
(492 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g37710.1 657 0.0
Glyma06g17390.1 650 0.0
Glyma10g44630.1 406 e-113
Glyma19g42880.1 260 2e-69
Glyma03g40270.1 220 3e-57
Glyma20g39420.1 99 8e-21
Glyma06g23110.1 57 6e-08
Glyma09g11450.1 57 7e-08
Glyma01g28910.1 52 1e-06
>Glyma04g37710.1
Length = 576
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/496 (70%), Positives = 367/496 (73%), Gaps = 5/496 (1%)
Query: 1 MDRRRNLSPVYTRQWXXXXXXXXXX-PAMSPAHPQSRLGPSS-TGISTVKRTQNXXXXXX 58
MDRRRN SPVY RQW PAMSPAHPQSRLGP+S TG+STVKRTQN
Sbjct: 1 MDRRRNASPVYARQWSGGSSSTGSSSPAMSPAHPQSRLGPTSATGLSTVKRTQNVAAKAA 60
Query: 59 XXXXXXXXXSQ-TAXXXXXXXXXLGFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XX 116
SQ T L FR
Sbjct: 61 AQRLARVMASQNTTADDGEDDDDLDFRFSAPSPASLSSFSSNSGSNRSASTNATAIPPIS 120
Query: 117 VARPNRSPSPALGRNFVEHTPAVRSTSAGRXXXXXXXXXXXXXXXXXTLRTPMLVPPIDP 176
VARPNRSPSPALGRNFVEHT +VRSTSAGR TLRTPM +PPIDP
Sbjct: 121 VARPNRSPSPALGRNFVEHTHSVRSTSAGRPAVSVRSAAVVPPNKS-TLRTPMAIPPIDP 179
Query: 177 PTNRSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQE 236
PTNR+REKRFT D++IR LNSKDTGDQREASALRDELDMLQEENE++LEKLRQAEEKRQE
Sbjct: 180 PTNRNREKRFTSDMSIRPLNSKDTGDQREASALRDELDMLQEENEDLLEKLRQAEEKRQE 239
Query: 237 VEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERDEDVTALRVE 296
VEAR RELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAA+Q+Q+ RDED+TALRVE
Sbjct: 240 VEARTRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAQQTQSGRDEDITALRVE 299
Query: 297 IQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVKHG 356
IQNLKDD LRTMTQRMILT EEMEEVVLKRCWLARYWGLAVKHG
Sbjct: 300 IQNLKDDATAALEQQQEAEAEAKSLRTMTQRMILTQEEMEEVVLKRCWLARYWGLAVKHG 359
Query: 357 ICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN 416
ICADI+QSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN
Sbjct: 360 ICADIAQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN 419
Query: 417 IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYXXXXXXXXX 476
IESMLSVEMGLRELASLKVEDAVVLALAQHRRPN VRQSVLDSK+ GDAKY
Sbjct: 420 IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNSVRQSVLDSKSRGDAKYSEAFELSEE 479
Query: 477 XXXDVLFKEAWLTYFW 492
DVLFKEAWLTYFW
Sbjct: 480 EAEDVLFKEAWLTYFW 495
>Glyma06g17390.1
Length = 576
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/496 (70%), Positives = 364/496 (73%), Gaps = 5/496 (1%)
Query: 1 MDRRRNLSPVYTRQWXXXXXXXXXX-PAMSPAHPQSRLGPSS-TGISTVKRTQNXXXXXX 58
MDRRRN SPVY RQW PAMSPAHPQSRLGP+S TG+STVKRTQN
Sbjct: 1 MDRRRNASPVYARQWSGGSSSTGSSSPAMSPAHPQSRLGPTSATGLSTVKRTQNVAAKAA 60
Query: 59 XXXXXXXXXSQTAXXXXXXXXXLG-FRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XX 116
SQT FR
Sbjct: 61 AQRLARVMASQTTTADDGEDDDDLDFRFSAPPPASLSSFSSNSGSNRSASANATAIPPIS 120
Query: 117 VARPNRSPSPALGRNFVEHTPAVRSTSAGRXXXXXXXXXXXXXXXXXTLRTPMLVPPIDP 176
VARPNRSPSPALGRNFVEHT +VRSTSAGR TLRTPM +PPIDP
Sbjct: 121 VARPNRSPSPALGRNFVEHTHSVRSTSAGRPAVSVRSAAVVAPNKS-TLRTPMAIPPIDP 179
Query: 177 PTNRSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQE 236
PTNR+R+KRFT DI+IR LNSKDTGDQREASALRDELDMLQEENE +LEKLRQAEEKRQE
Sbjct: 180 PTNRNRDKRFTSDISIRPLNSKDTGDQREASALRDELDMLQEENEVLLEKLRQAEEKRQE 239
Query: 237 VEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERDEDVTALRVE 296
VEAR RELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAA+Q+Q+ RDED+ ALRVE
Sbjct: 240 VEARTRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAQQTQSGRDEDIAALRVE 299
Query: 297 IQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVKHG 356
IQNLKDD LRTMTQRMILT EEMEEVVLKRCWLARYWGLAVKHG
Sbjct: 300 IQNLKDDATAALEQQQEAEAEAKALRTMTQRMILTQEEMEEVVLKRCWLARYWGLAVKHG 359
Query: 357 ICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN 416
ICADI+QSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN
Sbjct: 360 ICADIAQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN 419
Query: 417 IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYXXXXXXXXX 476
IESMLSVEMGLRELA+LKVEDAVVLALAQHRRPN VRQSVLDSK+ GDAKY
Sbjct: 420 IESMLSVEMGLRELANLKVEDAVVLALAQHRRPNSVRQSVLDSKSHGDAKYSEAFELSEE 479
Query: 477 XXXDVLFKEAWLTYFW 492
DVLFKEAWLTYFW
Sbjct: 480 EAEDVLFKEAWLTYFW 495
>Glyma10g44630.1
Length = 529
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/489 (50%), Positives = 286/489 (58%), Gaps = 73/489 (14%)
Query: 29 SPAHPQSRLGPSST--------GISTVKRTQNXXXXXXXXXXXXXXXSQTAXXXXXXXXX 80
S H QSR G S + GISTVKRTQN SQTA
Sbjct: 18 SHTHSQSRNGHSRSSSLTLTGGGISTVKRTQNVAAKAAAQRLAQVMASQTAVAAADDDDD 77
Query: 81 ---LGFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARPNRSPSPALGRNFVEHTP 137
LGFR +SPSPAL RN VE +
Sbjct: 78 EDDLGFRYTAPPPLSLSRGSA-----------------------KSPSPALARNLVEESM 114
Query: 138 AVRSTSAGRXXXXXXXXXXXXXXXXXTLRTPMLVPPIDPPT-------------NRSREK 184
+R TP PP+ T N+ ++K
Sbjct: 115 YLRPAP-----------------------TPGNRPPLSLRTPAPVPPLDPPIHNNKPKDK 151
Query: 185 RFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQEVEARAREL 244
RF D + L KD+G QREAS L DE+DMLQEEN++IL+KLR E++ +E EAR REL
Sbjct: 152 RFPFDTAL--LQPKDSGYQREASTLCDEVDMLQEENQSILDKLRLEEDRCKESEARVREL 209
Query: 245 EKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERDEDVTALRVEIQNLKDDX 304
EKQVASLGEGVSLEAKLLSRKEAALRQREAALK AK S+ D+++T+L+ EI+N K +
Sbjct: 210 EKQVASLGEGVSLEAKLLSRKEAALRQREAALKNAKDSKEGVDKEITSLQTEIENAKVET 269
Query: 305 XXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVKHGICADISQS 364
LR+MTQRMILT +EMEEVVLKRCWLARYWGLA K+GICAD++ S
Sbjct: 270 ETAVRQLNGAESEVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICADVAVS 329
Query: 365 KHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPD-RSKLVRDLNDLAGEGNIESMLSV 423
K+E WSSLAPLPFE+V+SAGQKAKEE W K D + RSKLV DLNDL GEGNIESMLSV
Sbjct: 330 KYELWSSLAPLPFEVVVSAGQKAKEECWEKGDDAIEKRSKLVPDLNDLTGEGNIESMLSV 389
Query: 424 EMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYXXXXXXXXXXXXDVLF 483
EMGL+ELASLKVEDA+V ALAQ RRPN RQ V D K+PGD K+ DVLF
Sbjct: 390 EMGLKELASLKVEDAIVQALAQQRRPNSARQLVSDIKSPGDPKFMEAFELSPEESEDVLF 449
Query: 484 KEAWLTYFW 492
KEAWLTYFW
Sbjct: 450 KEAWLTYFW 458
>Glyma19g42880.1
Length = 666
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/415 (41%), Positives = 235/415 (56%), Gaps = 58/415 (13%)
Query: 122 RSPSPALGRNFVEHTPAVRSTSAGRXXXXXXXXXXXXXXXXXTLR--TPMLVPPIDPPTN 179
RSP P+ N + P+ RSTS GR TLR + + VPP +P +
Sbjct: 209 RSPQPSSANN--DQPPSARSTS-GRPSGLSKVVPMVPPSVPITLRPASSVGVPPSEPLLD 265
Query: 180 RSREKRFTPDITIRQLNSKDTGDQREAS-ALRDELDMLQEENENILEKLRQAEEKRQEVE 238
++KR + D+ ++ QR S L DELDMLQEEN+N+++KLR AEEK +E E
Sbjct: 266 IRKDKRLSLDLGSMKVRENANQQQRPTSHELEDELDMLQEENDNLVDKLRLAEEKYEEAE 325
Query: 239 ARARELEKQVASLGEGVSLEAKLLSRKE--AALRQREAALKAA--KQSQNERDEDVTALR 294
+R R+LE+QVA+LGEGV+LEA LLSR++ + +RE A + A + + AL+
Sbjct: 326 SRVRQLEQQVATLGEGVTLEAHLLSRQKRGSTATKRETANQPAALRNASKNHGGFQAALQ 385
Query: 295 VEIQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVK 354
+ + +++ LR MTQRMILT EEMEEVVLKRCWLARYWGL V+
Sbjct: 386 ADAETAREETESAFEK----------LRLMTQRMILTPEEMEEVVLKRCWLARYWGLCVR 435
Query: 355 HGICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLV--------- 405
HGI ADI+++K+++WS LAP P E+V++A +KAKEE+ N + + LV
Sbjct: 436 HGIHADIAEAKYKYWSMLAPNPIEVVLAAAEKAKEETGNVNYFLNFFNFLVLVVCLLSFF 495
Query: 406 -----------------RDLNDLAGEGNIESMLSVEMGLRELAS----------LKVEDA 438
RDL +L+GEGNIE+ML VE GLR+LAS LKVE+A
Sbjct: 496 IFSVGFLHLDVEDTEGQRDLKELSGEGNIENMLFVEQGLRQLASLKLRFFSVSVLKVEEA 555
Query: 439 VVLALAQHRRPNLVRQSVLDS-KAPGDAKYXXXXXXXXXXXXDVLFKEAWLTYFW 492
+V+ALAQHRRPN+++ D K P + + DV FK+AWL Y W
Sbjct: 556 LVVALAQHRRPNMLKAGFSDDLKLPIEGQC-DAFELSQEEAEDVSFKQAWLAYIW 609
>Glyma03g40270.1
Length = 626
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 206/377 (54%), Gaps = 60/377 (15%)
Query: 122 RSPSPALGRNFVEHTPAVRSTSAGRXXXXXXXXXXXXXXXXXTLR--TPMLVPPIDPPTN 179
RSP P+ N + P+ RSTS GR TLR + + VPP +P +
Sbjct: 229 RSPQPSSANN--DQPPSARSTS-GRPSGLSKVVPMVPPSVPITLRPVSSVGVPPSEPLLD 285
Query: 180 RSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQEVEA 239
+++R N + QR S L DELDMLQEEN+N+++KLR AEEK +E E+
Sbjct: 286 IRKDRRHAAATVRENANQQ----QRPTSELEDELDMLQEENDNLVDKLRLAEEKCEEAES 341
Query: 240 RARELEKQVASLGEGVSLEAKLLSRKEAALR---QREAALKAAKQSQNERDEDVTALRVE 296
R R+LE+Q AALR + + A Q+ E + TA E
Sbjct: 342 RVRQLEQQ-------------------AALRNASKNHGGFQTALQADAETAREETASAFE 382
Query: 297 IQNLKDDXXXXXXXXXXXXXXXXXLRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVKHG 356
LR MTQRMILT EEMEEVVLKRCWLARYWGL V+HG
Sbjct: 383 -----------------------KLRLMTQRMILTPEEMEEVVLKRCWLARYWGLCVRHG 419
Query: 357 ICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGN 416
I ADI+++K+++WS AP P E+V++A +KAKEE K D D + DL +L+GEGN
Sbjct: 420 IHADIAEAKYKYWSMFAPNPIEVVLAAAKKAKEE---KDLDVEDTEGQL-DLKELSGEGN 475
Query: 417 IESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDS-KAPGDAKYXXXXXXXX 475
IE+ML VE GLR+LASLKVE+A+ +ALAQHRRPN+++ D K P + +
Sbjct: 476 IENMLFVEQGLRQLASLKVEEALAVALAQHRRPNMLKAGFSDDLKLPIEGQC-DAFELSQ 534
Query: 476 XXXXDVLFKEAWLTYFW 492
DV FK+AWL Y W
Sbjct: 535 EEAEDVSFKQAWLAYIW 551
>Glyma20g39420.1
Length = 145
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 53/73 (72%)
Query: 420 MLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYXXXXXXXXXXXX 479
MLSVEMGL+ELASLKVEDA+V ALAQ RRPN RQ V D K+PGD K+
Sbjct: 1 MLSVEMGLKELASLKVEDAIVRALAQQRRPNSARQLVSDIKSPGDPKFMEAFELSPEESE 60
Query: 480 DVLFKEAWLTYFW 492
DVLFKEAWLTYFW
Sbjct: 61 DVLFKEAWLTYFW 73
>Glyma06g23110.1
Length = 82
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 1 MDRRRNLSPVYTRQW-XXXXXXXXXXPAMSPAHPQSRLGP-SSTGISTVKRTQN 52
MDRRRN S +Y RQW P M PAHPQSRLG G+STVKRTQN
Sbjct: 1 MDRRRNKSLIYARQWSGGSNSTGSSSPTMLPAHPQSRLGTIFVIGLSTVKRTQN 54
>Glyma09g11450.1
Length = 83
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 1 MDRRRNLSPVYTRQWXXXXXXXXXX-PAMSPAHPQSRLGP-SSTGISTVKRTQN 52
MDRRR S +Y RQW P M PAHPQSRLG TG+STVKRTQN
Sbjct: 1 MDRRRTKSLIYARQWSGGSNSTGSSSPTMLPAHPQSRLGTIFVTGLSTVKRTQN 54
>Glyma01g28910.1
Length = 66
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 1 MDRRRNLSPVYTRQW-XXXXXXXXXXPAMSPAHPQSRLGPSS-TGISTVKRTQN 52
MDRRRN SP+Y RQW MSPA+PQS L +S TGISTVKR QN
Sbjct: 1 MDRRRNTSPIYARQWSGGSSSTDSSSSTMSPAYPQSHLSTTSATGISTVKRMQN 54