Miyakogusa Predicted Gene

Lj1g3v1357910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KBN0_SOYBN 788 87.8 93.2 (tr|I1KBN0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G63860.1 696 75.8 86.5 | Symbols: UVR8 | Regulator of chromosome condensation (RCC1) family protein | chr5:25554821-25558587 REVERSE LENGTH=440
Medicago Medtr3g096780.1 777 86.7 92.8 | chromosome condensation regulator RCC1 repeat protein | HC | chr3:44289276-44296458 | 20130731
Soybean Glyma06g16300.1 788 87.8 93.2  
LJGI gnl|LJGI|FS337333 1300 100.0 100.0 similar to UniRef100_A7PKR9 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1357910.1 length: 447 aa.
IPR000408 Regulator of chromosome condensation, RCC1
method AccNumber shortName E-value location
FPrintScan PR00633 RCCNDNSATION 4.9e-27 38-54
92-108
142-158
180-196
196-210
289-307
347-368
HMMPfam PF00415 RCC1 1.7e-08 39-84
91-138
141-190
193-242
247-296
300-348
353-384
PatternScan PS00626 RCC1_2 NA 23-33
180-190
234-244
286-296
338-348
ProfileScan PS50012 RCC1_3 10.605 37-88
90-141
142-193
194-247
248-299
300-351
352-399
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Gene3D G3DSA:2.130.10.30 no description 5.8e-51 17-227
228-388
superfamily SSF50985 RCC1/BLIP-II 5.6e-49 12-223
230-383
no_ID  
HMMPanther PTHR22870 REGULATOR 2.2e-255 1-401
HMMPanther PTHR22870:SF27 UVB-RESISTANCE 2.2e-255 1-401
Wolf-PSORT
Lj1g3v1357910.1	nucl 7, cyto 3, pero 3, cyto_pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1357910.1