Miyakogusa Predicted Gene
- Lj1g3v1357910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1357910.1 tr|F2DAA9|F2DAA9_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,33.14,3e-18,RCC1/BLIP-II,Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II;
RCC1,Regulato,CUFF.27160.1
(447 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 696 0.0
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 212 5e-55
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 212 5e-55
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 211 7e-55
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 196 4e-50
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 190 2e-48
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 189 4e-48
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 182 4e-46
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 179 2e-45
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 176 2e-44
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 176 3e-44
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 172 3e-43
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 172 5e-43
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 170 2e-42
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 160 2e-39
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 160 2e-39
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 157 1e-38
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 154 1e-37
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 151 1e-36
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 149 4e-36
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 147 1e-35
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 145 6e-35
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 143 3e-34
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 140 2e-33
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 136 3e-32
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 136 4e-32
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 126 3e-29
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 126 3e-29
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 126 3e-29
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 124 9e-29
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 124 1e-28
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 124 1e-28
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 116 3e-26
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/446 (75%), Positives = 386/446 (86%), Gaps = 6/446 (1%)
Query: 2 MVDDQAQVEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLP 61
M +D A E TA PPR+VL+ISAGASHSVALLSG+ VCSWGRGEDGQLGHGD +DR P
Sbjct: 1 MAEDMAADEVTA--PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSP 58
Query: 62 TLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQ 121
T LSALD Q+VSV CGADHT+AYS S +EVYSWGWGDFGRLGHGNSSDLF P PI+AL
Sbjct: 59 TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH 118
Query: 122 GIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVA 181
GIRIKQI+CGDSHCLAVTMEGEVQSWGRNQNGQLGLG +DSLVPQKIQ F+G+ IKMVA
Sbjct: 119 GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVA 178
Query: 182 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHT 241
AGAEH+ A+TE+G+LYGWGWGRYGNLGLGDR DR +PE+V+S +KM MVACGWRHT
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG--GEKMSMVACGWRHT 236
Query: 242 ISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQ 301
ISVS SG L+TYGWSKYGQLGHGDLED+L+PHKLEALS+ I Q+SGGWRH+MALTS G+
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 302 LYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGT 361
LYGWGWNKFGQVGVG+N+D+ +PVQV+FP DQKVVQ+SCGWRHT+AVTER NV++WGRGT
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356
Query: 362 NGQLGQGDTVDRNSPKIIEALSVDGSCGQHIESSNTDQISGKSLSSLSERYAVVPDETVS 421
NGQLG G++VDRN PKIIEALSVDG+ GQHIESSN D SGKS S +ERYAVVPDET
Sbjct: 357 NGQLGIGESVDRNFPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDETGL 416
Query: 422 GQTANPGNGDRFDLSVPESDVKRIRV 447
++ GNG D+SVP++DVKR+R+
Sbjct: 417 TDGSSKGNGG--DISVPQTDVKRVRI 440
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 188/340 (55%), Gaps = 18/340 (5%)
Query: 57 DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQP 116
D LLP L + V ++ACG H + + + E +SWG GRLGHG S++ P+
Sbjct: 299 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-QGESFSWGEESEGRLGHGVDSNVQHPKL 357
Query: 117 IRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTF-QGV 175
I AL I+ ++CG+ H AVT+ G++ +WG+ G LG G VP+++ +G+
Sbjct: 358 IDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGI 417
Query: 176 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
+ +A G H+ +T G+L+ +G G +G LG GDR +IP +V S L+ + + A
Sbjct: 418 HVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 475
Query: 236 CGWRHTISV------------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLI 283
CG HT +V SSG LFT+G +LGHGD E LVP + AL +
Sbjct: 476 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 535
Query: 284 CQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFP-HDQKVVQISCGW 342
CQV+ G ++ALT+ G +Y G +GQ+G + D P +V H V +I+CG
Sbjct: 536 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPHADGKVPTRVDGKLHKSFVEEIACGA 594
Query: 343 RHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
H +T R VY+WG+G+NG+LG GD DRNSP ++E+L
Sbjct: 595 YHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESL 634
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 186/360 (51%), Gaps = 22/360 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G H+V + SWG +G+LGHG + P L+ AL+ + VACG H+
Sbjct: 317 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 376
Query: 83 IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRAL-QGIRIKQISCGDSHCLAVTME 141
A + S ++Y+WG GDFG LGHGN ++P+ + L +GI + I+CG H VT
Sbjct: 377 CAVTLSG-DLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 435
Query: 142 GEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE--------- 192
G++ ++G G LG G +P+++ + +G+ A G H+ A+ E
Sbjct: 436 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 495
Query: 193 ---NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGG 249
+G+L+ WG G LG GD+ + +P V++ L VACG T+++++SG
Sbjct: 496 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGH 553
Query: 250 LFTYGWSKYGQLGHGDLEDYLVPHKLE-ALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
++T G YGQLG+ D VP +++ L + +++ G H LTS ++Y WG
Sbjct: 554 VYTMGSPVYGQLGNPH-ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG 612
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQG 368
G++G GD DR++P V+ D++V I+CG T AV ++ W G + + G
Sbjct: 613 SNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASGMDQSMCSG 668
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 188/340 (55%), Gaps = 18/340 (5%)
Query: 57 DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQP 116
D LLP L + V ++ACG H + + + E +SWG GRLGHG S++ P+
Sbjct: 333 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-QGESFSWGEESEGRLGHGVDSNVQHPKL 391
Query: 117 IRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTF-QGV 175
I AL I+ ++CG+ H AVT+ G++ +WG+ G LG G VP+++ +G+
Sbjct: 392 IDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGI 451
Query: 176 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
+ +A G H+ +T G+L+ +G G +G LG GDR +IP +V S L+ + + A
Sbjct: 452 HVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 509
Query: 236 CGWRHTISV------------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLI 283
CG HT +V SSG LFT+G +LGHGD E LVP + AL +
Sbjct: 510 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 569
Query: 284 CQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFP-HDQKVVQISCGW 342
CQV+ G ++ALT+ G +Y G +GQ+G + D P +V H V +I+CG
Sbjct: 570 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPHADGKVPTRVDGKLHKSFVEEIACGA 628
Query: 343 RHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
H +T R VY+WG+G+NG+LG GD DRNSP ++E+L
Sbjct: 629 YHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESL 668
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 186/360 (51%), Gaps = 22/360 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G H+V + SWG +G+LGHG + P L+ AL+ + VACG H+
Sbjct: 351 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 410
Query: 83 IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRAL-QGIRIKQISCGDSHCLAVTME 141
A + S ++Y+WG GDFG LGHGN ++P+ + L +GI + I+CG H VT
Sbjct: 411 CAVTLSG-DLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 469
Query: 142 GEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE--------- 192
G++ ++G G LG G +P+++ + +G+ A G H+ A+ E
Sbjct: 470 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 529
Query: 193 ---NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGG 249
+G+L+ WG G LG GD+ + +P V++ L VACG T+++++SG
Sbjct: 530 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGH 587
Query: 250 LFTYGWSKYGQLGHGDLEDYLVPHKLE-ALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
++T G YGQLG+ D VP +++ L + +++ G H LTS ++Y WG
Sbjct: 588 VYTMGSPVYGQLGNPH-ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG 646
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQG 368
G++G GD DR++P V+ D++V I+CG T AV ++ W G + + G
Sbjct: 647 SNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASGMDQSMCSG 702
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 190/340 (55%), Gaps = 18/340 (5%)
Query: 57 DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQP 116
D LLP L + V ++ACG H + + + E +SWG GRLGHG S++ P+
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVT-KQGESFSWGEESEGRLGHGVDSNIQQPKL 353
Query: 117 IRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQ-TFQGV 175
I AL I+ ++CG+ H AVT+ G++ +WG+ G LG G VP+++ +G+
Sbjct: 354 IDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGI 413
Query: 176 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
+ +A G H+ +T G+L+ +G G +G LG GD+ +IP +V S L+ + + A
Sbjct: 414 HVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 471
Query: 236 CGWRHTISV------------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLI 283
CG HT +V SSG LFT+G G+LGHG+ E LVP + AL +
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 531
Query: 284 CQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFP-HDQKVVQISCGW 342
CQV+ G ++ALT+ G +Y G +GQ+G + D P +V+ H V +I+CG
Sbjct: 532 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGA 590
Query: 343 RHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
H +T R VY+WG+G+NG+LG GD DRNSP ++E+L
Sbjct: 591 YHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESL 630
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 187/360 (51%), Gaps = 22/360 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G H+V + SWG +G+LGHG + P L+ AL+ + VACG H+
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHS 372
Query: 83 IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIR-ALQGIRIKQISCGDSHCLAVTME 141
A + S ++Y+WG GDFG LGHGN ++P+ + L+GI + I+CG H VT
Sbjct: 373 CAVTLSG-DLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 431
Query: 142 GEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE--------- 192
G++ ++G G LG G +P+++ + +G+ A G H+ A+ E
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 193 ---NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGG 249
+G+L+ WG G G LG G++ + +P V++ L VACG T+++++SG
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGH 549
Query: 250 LFTYGWSKYGQLGHGDLEDYLVPHKLE-ALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
++T G YGQLG+ D P+++E L + +++ G H LTS ++Y WG
Sbjct: 550 VYTMGSPVYGQLGNSH-ADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG 608
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQG 368
G++G GD DR++P V+ D++V I+CG T AV ++ W G + + G
Sbjct: 609 SNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASGMDQSMCSG 664
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 16/290 (5%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLS-ALDAQQVVSVACG 78
+ L++ G HS A+ + +WG+G+ G LGHG+ +P ++ L+ V S+ACG
Sbjct: 362 IELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 79 ADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAV 138
HT A S +++++G G FG LGHG+ +FIP+ + +L+G+R + +CG H AV
Sbjct: 422 PYHT-AVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAV 480
Query: 139 T------------MEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
G++ +WG G+LG G + LVP + VA G
Sbjct: 481 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSL 540
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSS 246
+VA+T +G +Y G YG LG D P +V L + + +ACG H ++S
Sbjct: 541 TVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTS 598
Query: 247 SGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMAL 296
++T+G G+LGHGD++D P +E+L DK + ++ G + A+
Sbjct: 599 RTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 187/355 (52%), Gaps = 22/355 (6%)
Query: 45 GEDGQLGH-GDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRL 103
G D +G+ G D L+P L + V +ACG H A + EV++WG GRL
Sbjct: 246 GADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHA-ALVSRQGEVFTWGEASGGRL 304
Query: 104 GHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWG--RNQNGQLGLGTAD 161
GHG D+ PQ I +L I ++CG+ H AVTM GE+ +WG + G LG GT
Sbjct: 305 GHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDV 364
Query: 162 DSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEK 220
+P++I +G+ I V+ G H+ IT G+L+ +G G +G LG GD+ + P +
Sbjct: 365 SHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPRE 424
Query: 221 VSSVDLQRDKMIMVACGWRHTISV-----------SSSGGLFTYGWSKYGQLGHGDLEDY 269
V S+ R I VACG H ++ SSG LFT+G +LGHGD E
Sbjct: 425 VESLSGLR--TIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPR 482
Query: 270 LVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAP--VQV 327
L P + AL D +V+ G ++ LT+ G++Y G +GQ+G N D P V+
Sbjct: 483 LKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG-NPNADGKLPCLVED 541
Query: 328 KFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
K D V +I+CG H +T R V++WG+G NG+LG GD DR +P +++AL
Sbjct: 542 KLTKDC-VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDAL 595
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 21/353 (5%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G H+ + V +WG G+LGHG D P L+ +L A + VACG HT
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHT 336
Query: 83 IAYSDSRLEVYSWGWG--DFGRLGHGNSSDLFIPQPIR-ALQGIRIKQISCGDSHCLAVT 139
A + + E+Y+WG G + G LGHG +IP+ I L+G++I +SCG H +T
Sbjct: 337 CAVTMTG-EIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALIT 395
Query: 140 MEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 192
G++ ++G G LG G + P+++++ G+ VA G H+ AI E
Sbjct: 396 STGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSS 455
Query: 193 ----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSG 248
+G+L+ WG G LG GD+ R P VS+ L VACG T+ +++SG
Sbjct: 456 SSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSA--LIDHTFHRVACGHSLTVGLTTSG 513
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
++T G + YGQLG+ + + L + L+ + +++ G H LTS +++ WG
Sbjct: 514 KVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKG 573
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGT 361
G++G GD DR AP V ++ V I+CG T A+ ++ W GT
Sbjct: 574 ANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAIC----LHKWVSGT 622
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 21/206 (10%)
Query: 194 GELYGWG---------WGRYGNLG-LGDRNDRWIPEKVSS---VDLQRDKMIMVACGWRH 240
G++Y WG +G N+G LG R+D IP+ + S +D+ +ACG +H
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHH-----IACGVKH 283
Query: 241 TISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCG 300
VS G +FT+G + G+LGHG +D P +E+L+ I V+ G H+ A+T G
Sbjct: 284 AALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTG 343
Query: 301 QLYGWG--WNKFGQVGVGDNVDRSAPVQVKFPHD-QKVVQISCGWRHTIAVTERANVYSW 357
++Y WG + G +G G +V P ++ P + ++ +SCG HT +T ++++
Sbjct: 344 EIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTF 403
Query: 358 GRGTNGQLGQGDTVDRNSPKIIEALS 383
G GT G LG GD P+ +E+LS
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLS 429
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 22 LISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADH 81
++ +HS + +S + +WG G+ +LGHGD + RL PT +SAL VACG
Sbjct: 446 IVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSL 505
Query: 82 TIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIR-ALQGIRIKQISCGDSHCLAVTM 140
T+ + S +VY+ G +G+LG+ N +D +P + L +++I+CG H +T
Sbjct: 506 TVGLTTSG-KVYTMGSTVYGQLGNPN-ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTS 563
Query: 141 EGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 190
EV +WG+ NG+LG G +D P + + +K +A G+ + AI
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 197/357 (55%), Gaps = 25/357 (7%)
Query: 33 LLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEV 92
+ S +V +WG GEDGQLG G +++ L +++ AL+ V SV G+ +++A D ++
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDG-KL 59
Query: 93 YSWGWGDFGRLGHGNSSDL-FIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQ 151
++WGW G LGH + P +++L ++I Q + G HCLAV +G +WG N+
Sbjct: 60 FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 152 NGQLGLGTADDS---------LVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWG 202
GQ G + D ++P++ Q + ++ VAAG HSV +T G Y W WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREG--YVWTWG 175
Query: 203 RYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLG 262
+ GD +P +V ++ R ++A G H +++ G L+ +G ++YGQLG
Sbjct: 176 Q--PWPPGDIKQISVPVRVQGLENVR----LIAVGAFHNLALKEDGTLWAWGNNEYGQLG 229
Query: 263 HGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRS 322
GD + P ++ L D + ++ G HS ALT+ G++YGWG + G++G GDN D+S
Sbjct: 230 TGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDN-DKS 288
Query: 323 A---PVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSP 376
+ P +V + ++Q+SCG H++A+T ++S+GRG +G+LG G V P
Sbjct: 289 SKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 183/360 (50%), Gaps = 35/360 (9%)
Query: 17 PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHG-DTDDRLLPTLLSALDAQQVVSV 75
P V + G+ +S+A+ + +WG + G LGH +T P+L+ +L ++V
Sbjct: 37 PFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQA 96
Query: 76 ACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLF-------IPQPIRALQGIRIKQI 128
A G H +A D + Y+WG ++G+ G S D I P R Q + ++Q+
Sbjct: 97 AIGGWHCLAVDD-QGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQV 155
Query: 129 SCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSV 188
+ G +H + +T EG V +WG+ G VP ++Q + V +++A GA H++
Sbjct: 156 AAGGTHSVVLTREGYVWTWGQ----PWPPGDIKQISVPVRVQGLENV--RLIAVGAFHNL 209
Query: 189 AITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSG 248
A+ E+G L+ WG YG LG GD R P V +D ++ +A G H+ ++++ G
Sbjct: 210 ALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLD--DLTLVDIAAGGWHSTALTNEG 267
Query: 249 GLFTYGWSKYGQLGHGDLED--YLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWG 306
++ +G ++G+LG GD + ++P K+ L+ + I QVS G HS+ALT G+++ +G
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 307 WNKFGQVGVGDNVDRSAPVQV---------KFPHDQK-------VVQISCGWRHTIAVTE 350
G++G G V P+++ +F H + ++CG RHT+A+ E
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 25/309 (8%)
Query: 88 SRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSW 147
S V +WG G+ G+LG G + + + AL+ ++ + G + LA+ +G++ +W
Sbjct: 3 SATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTW 62
Query: 148 GRNQNGQLGLGTADDSL-VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGN 206
G NQ G LG + P +++ V I A G H +A+ + G Y WG YG
Sbjct: 63 GWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 207 LGLGD---------RNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYG--W 255
G R D IP++ + Q+ + VA G H++ ++ G ++T+G W
Sbjct: 123 CGEEPSKDETGRPVRRDIVIPKRCA----QQLTVRQVAAGGTHSVVLTREGYVWTWGQPW 178
Query: 256 SKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGV 315
GD++ VP +++ L + + V G H++AL G L+ WG N++GQ+G
Sbjct: 179 PP------GDIKQISVPVRVQGLENVRLIAV--GAFHNLALKEDGTLWAWGNNEYGQLGT 230
Query: 316 GDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNS 375
GD RS P+ V+ D +V I+ G H+ A+T VY WGRG +G+LG GD D++S
Sbjct: 231 GDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDN-DKSS 289
Query: 376 PKIIEALSV 384
+ + +++
Sbjct: 290 KMLPQKVNL 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 244 VSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLY 303
++S+ + +G + GQLG G E+ + ++AL + V GG R+S+A+ G+L+
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLF 60
Query: 304 GWGWNKFGQVG-VGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTN 362
WGWN+ G +G + S P VK + K+VQ + G H +AV ++ Y+WG
Sbjct: 61 TWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 363 GQLGQGDTVDRNSPKIIEALSVDGSCGQHI 392
GQ G+ + D + + + C Q +
Sbjct: 121 GQCGEEPSKDETGRPVRRDIVIPKRCAQQL 150
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 208/391 (53%), Gaps = 32/391 (8%)
Query: 33 LLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEV 92
+++ ++ +WG GEDGQLG G +++ ++ AL+ V SV G+ +++A D +
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGT-M 59
Query: 93 YSWGWGDFGRLGHGNSSDL-FIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQ 151
++WGW G LGH + IP ++AL ++I Q + G HCLAV +G +WG N+
Sbjct: 60 FTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 152 NGQ---------LGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWG-- 200
GQ +G D ++P++ + ++ VAAG HSV +T G ++ WG
Sbjct: 120 YGQCGEEPLKDEMGRPVRRDIVIPKRCAPK--LTVRQVAAGGTHSVVLTREGHVWTWGQP 177
Query: 201 WGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQ 260
W GD +P +V ++ R ++A G H +++ G L +G ++YGQ
Sbjct: 178 WPP------GDIKQISVPVRVQGLENVR----LIAVGAFHNLALEEDGRLLAWGNNEYGQ 227
Query: 261 LGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVD 320
LG GD + P ++ L D + ++ G HS ALT G++YGWG + G++G+GDN D
Sbjct: 228 LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDN-D 286
Query: 321 RSA---PVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSP- 376
+S+ P +V ++ ++Q+SCG H++A+T ++S+GRG +G+LG G V P
Sbjct: 287 KSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346
Query: 377 -KIIEALSVDGSCGQHIESSNTDQISGKSLS 406
I+ +GS H + + S KS++
Sbjct: 347 ELPIKIPPPEGSF-NHTDEEEEGKWSAKSIA 376
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 61/305 (20%)
Query: 17 PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGH-GDTDDRLLPTLLSALDAQQVVSV 75
P V + +G+ +S+A+ + +WG + G LGH +T +P+ + AL ++
Sbjct: 37 PYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQA 96
Query: 76 ACGADHTIAYSDSRLEVYSWGWGDFGR---------LGHGNSSDLFIPQ----------- 115
A G H +A D + Y+WG ++G+ +G D+ IP+
Sbjct: 97 AIGGWHCLAVDD-QGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQV 155
Query: 116 ---------------------------------PIRALQGIR-IKQISCGDSHCLAVTME 141
P+R +QG+ ++ I+ G H LA+ +
Sbjct: 156 AAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVR-VQGLENVRLIAVGAFHNLALEED 214
Query: 142 GEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGW 201
G + +WG N+ GQLG G + P +Q + + +AAG HS A+T+ GE+YGWG
Sbjct: 215 GRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGR 274
Query: 202 GRYGNLGLG--DRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYG 259
G +G LGLG D++ + +P+KV+ L + +I V+CG H+++++ G +F++G +G
Sbjct: 275 GEHGRLGLGDNDKSSKMVPQKVNL--LAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHG 332
Query: 260 QLGHG 264
+LG+G
Sbjct: 333 RLGYG 337
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 25/247 (10%)
Query: 15 SPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVS 74
+P V ++AG +HSV L V +WG+ GD +P + L+ ++++
Sbjct: 147 APKLTVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIA 202
Query: 75 VACGADHTIAY-SDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDS 133
V GA H +A D RL +WG ++G+LG G++ P P++ L + + I+ G
Sbjct: 203 V--GAFHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGW 258
Query: 134 HCLAVTMEGEVQSWGRNQNGQLGLGTADDS--LVPQKIQTFQGVPIKMVAAGAEHSVAIT 191
H A+T +GEV WGR ++G+LGLG D S +VPQK+ I V+ G HSVA+T
Sbjct: 259 HSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318
Query: 192 ENGELYGWGWGRYGNLGLGDR----NDRWIPEKV-------SSVDLQRD---KMIMVACG 237
+G ++ +G G +G LG G + +P K+ + D + + +ACG
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACG 378
Query: 238 WRHTISV 244
RHT+++
Sbjct: 379 GRHTLAI 385
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 189/360 (52%), Gaps = 28/360 (7%)
Query: 57 DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQP 116
D L+P L + V +ACG H IA + EV++W GRLGHG D+ P+
Sbjct: 257 DVLIPKPLESNVVLDVHQIACGVRH-IALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKL 315
Query: 117 IRALQGIRIKQISCGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTADDSLVPQKIQ-TFQ 173
+ L I ++CG+ H AV+ G++ +WG + G LG G+ +P+++ +
Sbjct: 316 VEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVE 375
Query: 174 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIM 233
G+ + VA G HS T NG+L+ +G G +G LG GDR P++V L K +
Sbjct: 376 GLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKM--LSGLKTLK 433
Query: 234 VACGWRHTISV----------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLI 283
VACG HT+++ +SS LFT+G +LGHG+ E YL+P + +L D
Sbjct: 434 VACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF 493
Query: 284 CQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHD----QKVVQIS 339
Q++ G ++ALT+ G ++ G GQ+G N D P V+ D + V +IS
Sbjct: 494 NQIACGHTFTVALTTSGHVFTMGGTSHGQLG-SSNSDGKLPCLVQ---DRLVGEFVEEIS 549
Query: 340 CGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEALSVDG----SCGQHIESS 395
CG H +T R+ V++WG+G+NG+LG GD DR +P ++EAL SCG + SS
Sbjct: 550 CGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSS 609
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 178/360 (49%), Gaps = 22/360 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G H + V +W G+LGHG D P L+ L + VACG HT
Sbjct: 275 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 334
Query: 83 IAYSDSRLEVYSWGWG--DFGRLGHGNSSDLFIPQPIR-ALQGIRIKQISCGDSHCLAVT 139
A S S ++++WG G + G LGHG+ +IP+ + ++G+++ ++CG H T
Sbjct: 335 CAVSTSG-DLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALAT 393
Query: 140 MEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 192
G++ ++G G LG G + P++++ G+ VA G H+VAI E
Sbjct: 394 ANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGT 453
Query: 193 ---NGELYGWGWGRYGNLGLGDRNDRWIPEKVSS-VDLQRDKMIMVACGWRHTISVSSSG 248
+ +L+ WG G LG G++ +P VSS +D ++ +ACG T+++++SG
Sbjct: 454 STSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQ---IACGHTFTVALTTSG 510
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
+FT G + +GQLG + + L + L + + ++S G H LTS +++ WG
Sbjct: 511 HVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKG 570
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQG 368
G++G GD DR P V+ ++ V ISCG T ++ ++ W G + + G
Sbjct: 571 SNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSIC----IHKWVSGADQSVCSG 626
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 13/236 (5%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACG 78
+VL ++ G HS + + ++G G G LGHGD + P + L + + VACG
Sbjct: 378 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACG 437
Query: 79 ADHTIAY---------SDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQIS 129
HT+A S S ++++WG GD RLGHGN +P + +L QI+
Sbjct: 438 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIA 497
Query: 130 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQ-TFQGVPIKMVAAGAEHSV 188
CG + +A+T G V + G +GQLG +D L P +Q G ++ ++ G H
Sbjct: 498 CGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQDRLVGEFVEEISCGDHHVA 556
Query: 189 AITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISV 244
+T E++ WG G G LG GD++DR P V + L+ + ++CG T S+
Sbjct: 557 VLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEA--LRERHVKSISCGSNFTSSI 610
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 181/343 (52%), Gaps = 21/343 (6%)
Query: 57 DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQP 116
D L+P L + V +ACG H A+ + E+++WG GRLGHG D+F P+
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHA-AFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRL 326
Query: 117 IRALQGIR-IKQISCGDSHCLAVTMEGEVQSWGRNQN--GQLGLGTADDSLVPQKIQ-TF 172
+ +L + ++CG+ H AVT+ GE+ +WG + G LG G+ +P++I +
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSL 386
Query: 173 QGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMI 232
+G+ + V+ G H+ IT G L+ +G G +G LG GD+ P +V S+ R I
Sbjct: 387 EGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR--TI 444
Query: 233 MVACGWRHTISV------------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSD 280
V+CG HT +V SSG LFT+G +LGHGD + L P + AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 281 KLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQ-IS 339
+++ G ++ LT+ GQ++ G +GQ+G D P V+ + V+ IS
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEIS 563
Query: 340 CGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
CG H A+T R VY+WG+G NG+LG GD DR P I+EAL
Sbjct: 564 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEAL 606
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 177/343 (51%), Gaps = 21/343 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVS-VACGADH 81
I+ G H+ + + +WG G+LGHG D P L+ +L A V VACG H
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345
Query: 82 TIAYSDSRLEVYSWGWG--DFGRLGHGNSSDLFIPQPIR-ALQGIRIKQISCGDSHCLAV 138
T A + + E+Y+WG G + G LGHG+ +IP+ I +L+G+ + +SCG H +
Sbjct: 346 TCAVTLAG-ELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALI 404
Query: 139 TMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------ 192
T G + ++G G LG G + P+++++ G+ V+ G H+ A+ E
Sbjct: 405 TSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQS 464
Query: 193 ------NGELYGWGWGRYGNLGLGDRNDRWIPEKVSS-VDLQRDKMIMVACGWRHTISVS 245
+G+L+ WG G LG GD++ R P V + +D K +ACG T+ ++
Sbjct: 465 NSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHK---IACGHSLTVGLT 521
Query: 246 SSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGW 305
+SG +FT G + YGQLG+ + L + L+ + + ++S G H ALTS ++Y W
Sbjct: 522 TSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTW 581
Query: 306 GWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
G G++G GD DR P V+ D+ V I+CG +T A+
Sbjct: 582 GKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 13/236 (5%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGA 79
V +S G H+ + S + ++G G G LGHGD + P + +L + ++V+CG
Sbjct: 391 VASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGV 450
Query: 80 DHTIAYSDSRL-----------EVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQI 128
HT A + + ++++WG GD RLGHG+ P + AL +I
Sbjct: 451 WHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKI 510
Query: 129 SCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSV 188
+CG S + +T G+V + G GQLG D L ++ ++ GA H
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVA 570
Query: 189 AITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISV 244
A+T E+Y WG G G LG GD DR +P V ++ + K I ACG +T ++
Sbjct: 571 ALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYI--ACGSNYTAAI 624
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G S +V L + V + G GQLG+ TD +L + L ++ V ++CGA H
Sbjct: 510 IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHV 569
Query: 83 IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTM 140
A + SR EVY+WG G GRLGHG+ D +P + AL+ +K I+CG ++ A+ +
Sbjct: 570 AALT-SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICL 626
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 181/349 (51%), Gaps = 26/349 (7%)
Query: 51 GHGDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSD 110
G + +D L P LL + V S++ GA H A + EV+ WG G+ G+LG + D
Sbjct: 273 GSKNQNDALSPKLLESATMFDVQSISLGAKHA-ALVTRQGEVFCWGNGNSGKLGLKVNID 331
Query: 111 LFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDS---LVPQ 167
+ P+ + +L+ + ++ ++C D AVT GE+ WG + GT + S + +
Sbjct: 332 IDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG------IDGGTIEQSGSQFLTR 385
Query: 168 KIQTFQG--VPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD 225
KI G + + VA GA H+ +T +G+L+ +G G +G LG G P++V S
Sbjct: 386 KISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVES-- 443
Query: 226 LQRDKMIMVACGWRHTISV------------SSSGGLFTYGWSKYGQLGHGDLEDYLVPH 273
L+R K+I V+CG HT ++ S G LFT+G G+LGH D + LVP
Sbjct: 444 LRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503
Query: 274 KLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQ 333
+ L D +VS GW ++AL+ G +Y G + GQ+G D+S V + Q
Sbjct: 504 CVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ 563
Query: 334 KVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
V I+ G H +T NVY+WG+G NGQLG GD DRNSP ++E L
Sbjct: 564 FVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPL 612
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 170/340 (50%), Gaps = 20/340 (5%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
IS GA H+ + V WG G G+LG D P + +L+ V SVAC T
Sbjct: 297 ISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQT 356
Query: 83 IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQG--IRIKQISCGDSHCLAVTM 140
A ++S E+Y WG D G + S F+ + I + G + + ++CG H VT
Sbjct: 357 CAVTESG-ELYLWGI-DGGTIEQSGSQ--FLTRKISDVLGGSLTVLSVACGAWHTAIVTS 412
Query: 141 EGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN------- 193
G++ ++G G LG G+ + P+++++ + + + V+ G H+ AI E
Sbjct: 413 SGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFY 472
Query: 194 -----GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSG 248
G+L+ WG G G LG D + +P V+ +L I V+CGW T+++S SG
Sbjct: 473 NAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVT--ELIDHDFIKVSCGWTLTVALSISG 530
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
++T G S +GQLG +D V L L+ + + ++ G H LTS G +Y WG
Sbjct: 531 TVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKG 590
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
GQ+G+GD DR++PV V+ D+ V I+CG T A+
Sbjct: 591 MNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAI 630
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
Query: 19 RVLLISAGASHSVALL------------SGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSA 66
+V+ +S G H+ A++ S + +WG G+ G+LGH D+ +L+PT ++
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTE 507
Query: 67 LDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIK 126
L + V+CG T+A S S VY+ G G+LG + D + + L +K
Sbjct: 508 LIDHDFIKVSCGWTLTVALSISGT-VYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVK 566
Query: 127 QISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
I+ G H +T G V +WG+ NGQLGLG D P ++ ++ +A G
Sbjct: 567 DIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNL 626
Query: 187 SVAITENGEL 196
+ AI + E+
Sbjct: 627 TAAICLHKEI 636
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 26/340 (7%)
Query: 57 DRLLPTLLS---ALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFI 113
D LP +L ALDAQ S++CG ++ + + + ++YSWG GRLGHG S +
Sbjct: 286 DSFLPKVLKSHVALDAQ---SISCGTNYAVLVTK-QGQMYSWGEESGGRLGHGVCSYVPH 341
Query: 114 PQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTADDSLVPQKIQ- 170
P+ I G ++ CG+ H AVT G++ +WG + G LGLG+ P +I
Sbjct: 342 PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG 401
Query: 171 TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDK 230
+G+ +K ++ G H+ +T G+L+ +G G +G LG GDR IP +V +++ R
Sbjct: 402 QMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCR-- 459
Query: 231 MIMVACGWRHTISV-------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLI 283
I ACG H+ +V +SSG LFT+G G+LGHGD+E L+P + L
Sbjct: 460 TIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSF 519
Query: 284 CQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQ-ISCGW 342
QV+ G ++AL+ GQ+Y G ++ R AP ++ + VQ ++CG+
Sbjct: 520 QQVACGQSITVALSMSGQVYA-----MGTADPSHDIVR-APSCIEGGLGKSFVQEVACGF 573
Query: 343 RHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
H + +A VY+WG+G+NGQLG GDT R P +++AL
Sbjct: 574 HHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKAL 613
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 201/441 (45%), Gaps = 43/441 (9%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
IS G +++V + + SWG G+LGHG P L+ + V CG HT
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHT 363
Query: 83 IAYSDSRLEVYSWGWGDF--GRLGHGNSSDLFIPQPIRAL---QGIRIKQISCGDSHCLA 137
A + S ++Y+WG GD G LG G+ + + +P+R L +GI +K ISCG H
Sbjct: 364 CAVTASG-DLYAWGDGDHNAGLLGLGSGASHW--KPVRILGQMEGIYVKAISCGPWHTAF 420
Query: 138 VTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAI------- 190
VT EG++ ++G G LG G + +P++++ G A G HS A+
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEA 480
Query: 191 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGL 250
T +G+L+ WG G G LG GD R IP V+ +D VACG T+++S SG +
Sbjct: 481 TSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTT--SFQQVACGQSITVALSMSGQV 538
Query: 251 FTYGWSKYGQLGHGDLEDYLV--PHKLEA-LSDKLICQVSGGWRHSMALTSCGQLYGWGW 307
+ +G D +V P +E L + +V+ G+ H L S ++Y WG
Sbjct: 539 YA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGK 590
Query: 308 NKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQ 367
GQ+G GD R P VK ++V ++ CG +T + + GT+
Sbjct: 591 GSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPI----TGTDSTKCS 646
Query: 368 GDTVDRNSPKIIEALSVDGSCGQHIESSNTDQIS-GKSLSSLSER-YAVVPD-----ETV 420
G R+ + L +CG +S T + S +++ + R Y V D E +
Sbjct: 647 G---CRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGI 703
Query: 421 SGQTANPGNGDRF-DLSVPES 440
A P N RF + S+P S
Sbjct: 704 RESLATPANSARFSNASLPSS 724
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 17/189 (8%)
Query: 19 RVLLISAGASHSVALLS--GNAVCS-----WGRGEDGQLGHGDTDDRLLPTLLSALDAQQ 71
R + + G HS A++S G A S WG G+DG+LGHGD + RL+P+ ++ LD
Sbjct: 459 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTS 518
Query: 72 VVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLF-IPQPIR-ALQGIRIKQIS 129
VACG T+A S S +VY+ G D S D+ P I L +++++
Sbjct: 519 FQQVACGQSITVALSMSG-QVYAMGTAD-------PSHDIVRAPSCIEGGLGKSFVQEVA 570
Query: 130 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVA 189
CG H + + EV +WG+ NGQLG G + +P ++ +G ++ V G+ ++
Sbjct: 571 CGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTAT 630
Query: 190 ITENGELYG 198
I + + G
Sbjct: 631 ICLHKPITG 639
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 191/366 (52%), Gaps = 36/366 (9%)
Query: 42 WGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFG 101
WG G+ G+LG G+ D + P + SAL + +VACG HT+ +++R V++ G D G
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETR-RVFATGLNDCG 112
Query: 102 RLGHGN-SSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTA 160
+LG + S P + L I IS G H A+T++GE+ WG+N +GQLGLG
Sbjct: 113 QLGVSDVKSHAMDPLEVSGLDK-DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKK 171
Query: 161 DDSLV--PQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGN---------LGL 209
+V P K++ G+ I+ VA G+EHSVA+T+ GE+ WG G G G+
Sbjct: 172 AARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGI 231
Query: 210 GDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDY 269
N + P + +L+ K+ VA G H+ +G F +G ++G G + +
Sbjct: 232 LRSNSEFTPRLIK--ELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNA 289
Query: 270 LVPHKLEAL--SDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQV 327
P + + ++++ C GG+ H+ +T G+LY WG N+ G +G +PV+V
Sbjct: 290 TTPSIISEVPYAEEVAC---GGY-HTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRV 345
Query: 328 KFPH-DQKVVQISCGWRHTIAVTERANVYSWGRG------------TNGQLGQGDTVDRN 374
+ P + V Q+SCGW+HT A+++ NV++WG G + GQLG G VD
Sbjct: 346 EGPFLESTVSQVSCGWKHTAAISDN-NVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYA 404
Query: 375 SPKIIE 380
P +++
Sbjct: 405 RPAMVD 410
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 142/312 (45%), Gaps = 25/312 (8%)
Query: 95 WGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQ 154
WG GD+GRLG GN + P AL I ++CG +H L +T V + G N GQ
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 155 LGLG-TADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 213
LG+ ++ P ++ I ++AG HS AIT +GELY WG G LGLG +
Sbjct: 114 LGVSDVKSHAMDPLEVSGLDK-DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKA 172
Query: 214 DRWI--PEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGW------------SKYG 259
R + P KV + L + VA G H+++V+ G + ++G S +G
Sbjct: 173 ARVVRVPTKVEA--LHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFG 230
Query: 260 QLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNV 319
L P ++ L + V+ G HS G + +G ++G G
Sbjct: 231 IL---RSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVR 287
Query: 320 DRSAPVQV-KFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKI 378
+ + P + + P+ + +++CG HT VT +Y+WG NG LG T +SP
Sbjct: 288 NATTPSIISEVPYAE---EVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVR 344
Query: 379 IEALSVDGSCGQ 390
+E ++ + Q
Sbjct: 345 VEGPFLESTVSQ 356
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 191 TENGELYG--WGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSG 248
+E+G+ + WG G YG LGLG+ + +W P S+ L + VACG HT+ ++ +
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSA--LSDHSITAVACGGAHTLFLTETR 101
Query: 249 GLFTYGWSKYGQLGHGDLEDYLV-PHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGW 307
+F G + GQLG D++ + + P ++ L DK I +S G+ HS A+T G+LY WG
Sbjct: 102 RVFATGLNDCGQLGVSDVKSHAMDPLEVSGL-DKDILHISAGYYHSAAITVDGELYMWGK 160
Query: 308 NKFGQVGVGDNVDR--SAPVQVKFPHDQKVVQISCGWRHTIAVTERANV 354
N GQ+G+G R P +V+ H + ++ G H++AVT+ V
Sbjct: 161 NSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEV 209
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 23 ISAGASHSVALLSGNAV---------CSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVV 73
++ G+ HSVA+ G V + G ++ P L+ L+ +V
Sbjct: 193 VALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVT 252
Query: 74 SVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDS 133
+VA G H+ A +D + +G ++G G + P I + ++++CG
Sbjct: 253 NVAAGLLHS-ACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVACGGY 309
Query: 134 HCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITE 192
H VT GE+ +WG N+NG LG + S P +++ F + V+ G +H+ AI++
Sbjct: 310 HTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISD 369
Query: 193 NGELYGWGWG------------RYGNLGLGDRNDRWIPEKVSSVDLQRD-KMIMVACGWR 239
N ++ WGWG G LG G D P + VDL ++ + + ++CG+
Sbjct: 370 N-NVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARP---AMVDLGKNVRAVHISCGFN 425
Query: 240 HTISV 244
HT +V
Sbjct: 426 HTAAV 430
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 245 SSSGGLFTYGWSK--YGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQL 302
S SG F W YG+LG G+L+ P ALSD I V+ G H++ LT ++
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRV 103
Query: 303 YGWGWNKFGQVGVGDNVDRSA-PVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGT 361
+ G N GQ+GV D + P++V D+ ++ IS G+ H+ A+T +Y WG+ +
Sbjct: 104 FATGLNDCGQLGVSDVKSHAMDPLEVS-GLDKDILHISAGYYHSAAITVDGELYMWGKNS 162
Query: 362 NGQLGQGDTVDR--NSPKIIEAL 382
+GQLG G R P +EAL
Sbjct: 163 SGQLGLGKKAARVVRVPTKVEAL 185
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACG 78
+V ++AG HS + +G ++G G + P+++S + + VACG
Sbjct: 250 KVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAE--EVACG 307
Query: 79 ADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRA---LQGIRIKQISCGDSHC 135
HT + E+Y+WG + G L G S P+R + Q+SCG H
Sbjct: 308 GYHTCVVTRGG-ELYTWGSNENGCL--GTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHT 364
Query: 136 LAVTMEGEVQSW------------GRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAG 183
A++ + V +W G + GQLG G+ D P + + V ++ G
Sbjct: 365 AAIS-DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCG 423
Query: 184 AEHSVAITEN 193
H+ A+ E+
Sbjct: 424 FNHTAAVLEH 433
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 187/363 (51%), Gaps = 34/363 (9%)
Query: 57 DRLLPTLLSA---LDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFI 113
D L P L + LD Q+V CG H +A + EV++WG GRLGHG D+
Sbjct: 238 DVLTPRPLESNVVLDVHQIV---CGVRH-VALVTRQGEVFTWGEEVGGRLGHGIQVDISR 293
Query: 114 PQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTADDSLVPQKIQ- 170
P+ + L I ++CG+ H V+ G++ SWG + G LG G+ +P+++
Sbjct: 294 PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSG 353
Query: 171 TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDK 230
+G+ + VA G HS T NG+L+ +G G +G LG G+R P++V S L K
Sbjct: 354 PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQS--LNGLK 411
Query: 231 MIMVACGWRHTISV----------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSD 280
+ VAC HT ++ SS LFT+G +LGHG+ E YL+P + +L D
Sbjct: 412 TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 471
Query: 281 KLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHD----QKVV 336
+++ G ++ALT+ G ++ G GQ+G D P V+ D + V
Sbjct: 472 YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQ---DRLVGEFVE 527
Query: 337 QISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEALS----VDGSCGQHI 392
+I+CG H +T R+ V++WG+G NG+LG GDT D+ +P ++EAL SCG +
Sbjct: 528 EIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNF 587
Query: 393 ESS 395
SS
Sbjct: 588 TSS 590
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 175/360 (48%), Gaps = 22/360 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I G H + V +WG G+LGHG D P L+ L + VACG HT
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 83 IAYSDSRLEVYSWGWG--DFGRLGHGNSSDLFIPQPIR-ALQGIRIKQISCGDSHCLAVT 139
S S +++SWG G + G LGHG+ +IP+ + L+G+++ ++CG H T
Sbjct: 316 CVVSTSG-DLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALAT 374
Query: 140 MEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 192
G++ ++G G LG G + P+++Q+ G+ VA H+ AI E
Sbjct: 375 ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTAT 434
Query: 193 ---NGELYGWGWGRYGNLGLGDRNDRWIPEKVSS-VDLQRDKMIMVACGWRHTISVSSSG 248
+ +L+ WG G LG G++ +P VSS +D K +ACG T+++++SG
Sbjct: 435 SMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHK---IACGHTFTVALTTSG 491
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
+FT G + +GQLG+ + L + L + + +++ G H LTS +++ WG
Sbjct: 492 HVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKG 551
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQG 368
G++G GD D+ P V+ D+ V +SCG T ++ ++ W G + + G
Sbjct: 552 ANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSIC----IHKWVSGADQSICSG 607
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACG 78
+VL ++ G HS + + ++G G G LGHG+ + P + +L+ + V VAC
Sbjct: 359 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACS 418
Query: 79 ADHT---------IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQIS 129
HT A S S ++++WG GD RLGHGN +P + +L +I+
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIA 478
Query: 130 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQ-TFQGVPIKMVAAGAEHSV 188
CG + +A+T G V + G +GQLG +D L P +Q G ++ +A GA H
Sbjct: 479 CGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQDRLVGEFVEEIACGAHHVA 537
Query: 189 AITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIM-VACGWRHTISV 244
+T E++ WG G G LG GD D+ P V ++ RD+ + ++CG T S+
Sbjct: 538 VLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEAL---RDRHVKSLSCGSNFTSSI 591
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 190/351 (54%), Gaps = 39/351 (11%)
Query: 55 TDDRLLPTLLSA---LDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDL 111
T+D LLP L + LDAQ ++ACG H + + + E++SWG G G+LGHG +D
Sbjct: 285 TEDALLPKALESTIVLDAQ---NIACGKCHAVLVTK-QGEIFSWGEGKGGKLGHGLETDA 340
Query: 112 FIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNG--QLGLGTADDSLVPQKI 169
P+ I +++G+ K ++CGD H A+T G++ SWG + LG G +P+++
Sbjct: 341 QKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRV 400
Query: 170 Q-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQR 228
QG+ + VA G H+ + +G+L+ +G G +G LG GDR +P +V S L
Sbjct: 401 TGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVES--LIG 458
Query: 229 DKMIMVACGWRHTISV-------------SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKL 275
+ VACG HT +V SS G +FT+G + GQLGHGD + L+P +
Sbjct: 459 LIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV 518
Query: 276 EALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPH---- 331
+L+++ ICQV+ G +++ TS G +Y G +GQ+G + + FP
Sbjct: 519 ISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-------NPTAKGNFPERVEG 571
Query: 332 ---DQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKII 379
+ V +I+CG H +T ++ +Y+WG+G NGQLG G+ ++ P ++
Sbjct: 572 DIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVV 622
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 178/327 (54%), Gaps = 27/327 (8%)
Query: 91 EVYSWG--WGDFGRLGHGNS-----SDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGE 143
+V+ WG D G GNS D +P+ + + + + I+CG H + VT +GE
Sbjct: 261 DVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGE 320
Query: 144 VQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR 203
+ SWG + G+LG G D+ P+ I + +G+ K +A G H+ AIT++G+LY WG G
Sbjct: 321 IFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGT 380
Query: 204 YGN--LGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQL 261
+ LG G+ + WIP++V+ DLQ + VACG HT V+SSG LFT+G +G L
Sbjct: 381 HNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGAL 439
Query: 262 GHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMAL-------------TSCGQLYGWGWN 308
GHGD VP ++E+L ++ +V+ G H+ A+ +S GQ++ WG
Sbjct: 440 GHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDG 499
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLG-- 366
+ GQ+G GDN + P V ++ + Q++CG T++ T R +VY+ G GQLG
Sbjct: 500 EKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNP 559
Query: 367 --QGDTVDRNSPKIIEALSVDGSCGQH 391
+G+ +R I+EA + +CG +
Sbjct: 560 TAKGNFPERVEGDIVEASVEEIACGSY 586
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 186/366 (50%), Gaps = 31/366 (8%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G H+V + + SWG G+ G+LGHG D P +S++ S+ACG HT
Sbjct: 305 IACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHT 364
Query: 83 IAYSDSRLEVYSWGWG--DFGRLGHGNSSDLFIPQPIRA-LQGIRIKQISCGDSHCLAVT 139
A + S ++YSWG G + LGHGN S +IP+ + LQG+ + ++CG H V
Sbjct: 365 CAITQSG-DLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVA 423
Query: 140 MEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 192
G++ ++G G LG G + VP+++++ G+ + VA G H+ A+ E
Sbjct: 424 SSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASE 483
Query: 193 ------NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSS 246
G+++ WG G G LG GD + + +PE V + L + + VACG T+S +S
Sbjct: 484 AEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVACGHSLTVSRTS 541
Query: 247 SGGLFTYGWSKYGQLGH----GDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQL 302
G ++T G + YGQLG+ G+ + + +EA +++ C G H LTS ++
Sbjct: 542 RGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIAC----GSYHVAVLTSKSEI 597
Query: 303 YGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTN 362
Y WG GQ+G G+ ++ P V F +++V I+CG T + V+ W G+
Sbjct: 598 YTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVIC----VHKWVPGSE 653
Query: 363 GQLGQG 368
L G
Sbjct: 654 HSLCAG 659
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGA 79
V+ ++ AS + S V +WG GE GQLGHGD D +LLP + +L + + VACG
Sbjct: 474 VVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGH 533
Query: 80 DHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVT 139
T++ + SR VY+ G +G+LG+ + F + + +++I+CG H +T
Sbjct: 534 SLTVSRT-SRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLT 592
Query: 140 MEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 199
+ E+ +WG+ NGQLG G ++ P + + +K + G+ + I ++ W
Sbjct: 593 SKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVIC----VHKW 648
Query: 200 GWGRYGNLGLGDRN 213
G +L G RN
Sbjct: 649 VPGSEHSLCAGCRN 662
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 156/305 (51%), Gaps = 10/305 (3%)
Query: 17 PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLL-PTLLSALDAQQVVSV 75
P +V +SA +HS +L V + G GH DT + P L+ AL V
Sbjct: 162 PAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221
Query: 76 ACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGI-RIKQISCGDSH 134
A G T+ S Y+ G G+LGHG++ D +P+ + L+ I + QI+ G S+
Sbjct: 222 AAGLHFTVFLSREG-HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280
Query: 135 CLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITE 192
LAVT +G V S+G N LG G D L P+ IQ F +G+ I V+AG EH+VA+
Sbjct: 281 VLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDS 340
Query: 193 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFT 252
NG +Y WG G G LG GD ND+ P+ + V+L + V R T + G L+
Sbjct: 341 NGRVYTWGKGYCGALGHGDENDKITPQVL--VNLNNCLAVQVCARKRKTFVLVEGGLLYG 398
Query: 253 YGWSKYGQLGHGDL---EDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNK 309
+GW +G LG D + L P LE L + QVS G H++ +T G+++G+G N+
Sbjct: 399 FGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNE 458
Query: 310 FGQVG 314
Q+G
Sbjct: 459 RAQLG 463
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 180/353 (50%), Gaps = 12/353 (3%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHG-DTDDRLLPTLLSALDAQQVVSVACGADH 81
I+ G H++ L++ + V S G G L HG +T + T + QV V+ +H
Sbjct: 116 IATGKYHTL-LINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 82 TIAYSDSRLEVYSWGWGDFGRLGHGNSS-DLFIPQPIRALQGIRIKQISCGDSHCLAVTM 140
+ A+ +V + G GH ++S +F P+ + AL+G KQ++ G + ++
Sbjct: 175 S-AFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSR 233
Query: 141 EGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 199
EG + G N +GQLG G D VP+ ++ + + P+ +AAG + +A+T++G +Y +
Sbjct: 234 EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSF 293
Query: 200 GWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYG 259
G G LG G++ D P + + + ++ V+ G H +++ S+G ++T+G G
Sbjct: 294 GSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCG 353
Query: 260 QLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQV-----G 314
LGHGD D + P L L++ L QV R + L G LYG+GW FG + G
Sbjct: 354 ALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRG 413
Query: 315 VGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQ 367
V D V R ++ PH +V Q+S G HTI VT+R ++ +G QLG
Sbjct: 414 VSDKVLRPRVLECLKPH--RVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 9 VEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALD 68
VEA +P ++V +AG +V L + G GQLGHGDT DR +P ++ L
Sbjct: 210 VEALKGTPCKQV---AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 69 AQ-QVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQ--GIRI 125
VV +A G + +A + VYS+G G LGHG D P+ I+A + GI I
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDG-SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHI 325
Query: 126 KQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAE 185
++S GD H +A+ G V +WG+ G LG G +D + PQ + V A
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKR 385
Query: 186 HSVAITENGELYGWGWGRYGNLGLGDR--NDRWIPEKVSSVDLQRDKMIMVACGWRHTIS 243
+ + E G LYG+GW +G+LG DR +D+ + +V L+ ++ V+ G HTI
Sbjct: 386 KTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLEC-LKPHRVSQVSTGLYHTIV 444
Query: 244 VSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKL 275
V+ G +F +G ++ QLGH L L P ++
Sbjct: 445 VTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 157/323 (48%), Gaps = 14/323 (4%)
Query: 69 AQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIP-QPIRALQGIRIKQ 127
+Q + +A G HT+ ++S+ VYS G G L HG+ + + PI ++ Q
Sbjct: 110 SQGKMQIATGKYHTLLINNSK--VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQ 167
Query: 128 ISCGDSHCLAVTMEGEVQSWGRNQNGQLG-LGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
+S +H V G+V + G N + G L T+ P+ ++ +G P K VAAG
Sbjct: 168 VSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHF 227
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSS 246
+V ++ G Y G +G LG GD DR +P+ V + ++ +A G + ++V+
Sbjct: 228 TVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK-TIGPVVQIAAGPSYVLAVTQ 286
Query: 247 SGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDK--LICQVSGGWRHSMALTSCGQLYG 304
G ++++G LGHG+ +D L P ++A K I +VS G H++AL S G++Y
Sbjct: 287 DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYT 346
Query: 305 WGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQ 364
WG G +G GD D+ P + ++ VQ+ R T + E +Y +G G
Sbjct: 347 WGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGS 406
Query: 365 L-----GQGDTVDRNSPKIIEAL 382
L G D V R P+++E L
Sbjct: 407 LGFPDRGVSDKVLR--PRVLECL 427
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)
Query: 127 QISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVP-QKIQTFQGVPIKMVAAGAE 185
QI+ G H L + +V S G + +G L G+ V I+ + V+A
Sbjct: 115 QIATGKYHTLLIN-NSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 186 HSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMI---------MVAC 236
HS + ++G++ L GD + +S + R K++ VA
Sbjct: 174 HSAFVLQSGQV----------LTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAA 223
Query: 237 GWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSD-KLICQVSGGWRHSMA 295
G T+ +S G +T G + +GQLGHGD D VP +E L + Q++ G + +A
Sbjct: 224 GLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLA 283
Query: 296 LTSCGQLYGWGWNKFGQVGVGDNVDRSAP--VQVKFPHDQKVVQISCGWRHTIAVTERAN 353
+T G +Y +G +G G+ D P +Q ++++S G H +A+
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGR 343
Query: 354 VYSWGRGTNGQLGQGDTVDRNSPKIIEALS 383
VY+WG+G G LG GD D+ +P+++ L+
Sbjct: 344 VYTWGKGYCGALGHGDENDKITPQVLVNLN 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 169 IQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQR 228
++T QG KM A ++ + N ++Y G G L G + + + ++
Sbjct: 107 VETSQG---KMQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCV--AFTPIEFPF 161
Query: 229 DKMI-MVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLV-PHKLEALSDKLICQV 286
+ V+ H+ V SG + T G + GH D + P +EAL QV
Sbjct: 162 PAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221
Query: 287 SGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQ-KVVQISCGWRHT 345
+ G ++ L+ G Y G N GQ+G GD +DR P V+F VVQI+ G +
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Query: 346 IAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEALSVDG 386
+AVT+ +VYS+G G+N LG G+ D P++I+A G
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 156/305 (51%), Gaps = 10/305 (3%)
Query: 17 PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLL-PTLLSALDAQQVVSV 75
P +V +SA +HS +L V + G GH DT + P L+ AL V
Sbjct: 162 PAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221
Query: 76 ACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGI-RIKQISCGDSH 134
A G T+ S Y+ G G+LGHG++ D +P+ + L+ I + QI+ G S+
Sbjct: 222 AAGLHFTVFLSREG-HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280
Query: 135 CLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITE 192
LAVT +G V S+G N LG G D L P+ IQ F +G+ I V+AG EH+VA+
Sbjct: 281 VLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDS 340
Query: 193 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFT 252
NG +Y WG G G LG GD ND+ P+ + V+L + V R T + G L+
Sbjct: 341 NGRVYTWGKGYCGALGHGDENDKITPQVL--VNLNNCLAVQVCARKRKTFVLVEGGLLYG 398
Query: 253 YGWSKYGQLGHGDL---EDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNK 309
+GW +G LG D + L P LE L + QVS G H++ +T G+++G+G N+
Sbjct: 399 FGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNE 458
Query: 310 FGQVG 314
Q+G
Sbjct: 459 RAQLG 463
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 180/353 (50%), Gaps = 12/353 (3%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHG-DTDDRLLPTLLSALDAQQVVSVACGADH 81
I+ G H++ L++ + V S G G L HG +T + T + QV V+ +H
Sbjct: 116 IATGKYHTL-LINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 82 TIAYSDSRLEVYSWGWGDFGRLGHGNSS-DLFIPQPIRALQGIRIKQISCGDSHCLAVTM 140
+ A+ +V + G GH ++S +F P+ + AL+G KQ++ G + ++
Sbjct: 175 S-AFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSR 233
Query: 141 EGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 199
EG + G N +GQLG G D VP+ ++ + + P+ +AAG + +A+T++G +Y +
Sbjct: 234 EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSF 293
Query: 200 GWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYG 259
G G LG G++ D P + + + ++ V+ G H +++ S+G ++T+G G
Sbjct: 294 GSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCG 353
Query: 260 QLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQV-----G 314
LGHGD D + P L L++ L QV R + L G LYG+GW FG + G
Sbjct: 354 ALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRG 413
Query: 315 VGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQ 367
V D V R ++ PH +V Q+S G HTI VT+R ++ +G QLG
Sbjct: 414 VSDKVLRPRVLECLKPH--RVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 9 VEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALD 68
VEA +P ++V +AG +V L + G GQLGHGDT DR +P ++ L
Sbjct: 210 VEALKGTPCKQV---AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 69 AQ-QVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQ--GIRI 125
VV +A G + +A + VYS+G G LGHG D P+ I+A + GI I
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDG-SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHI 325
Query: 126 KQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAE 185
++S GD H +A+ G V +WG+ G LG G +D + PQ + V A
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKR 385
Query: 186 HSVAITENGELYGWGWGRYGNLGLGDR--NDRWIPEKVSSVDLQRDKMIMVACGWRHTIS 243
+ + E G LYG+GW +G+LG DR +D+ + +V L+ ++ V+ G HTI
Sbjct: 386 KTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLEC-LKPHRVSQVSTGLYHTIV 444
Query: 244 VSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKL 275
V+ G +F +G ++ QLGH L L P ++
Sbjct: 445 VTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 157/323 (48%), Gaps = 14/323 (4%)
Query: 69 AQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIP-QPIRALQGIRIKQ 127
+Q + +A G HT+ ++S+ VYS G G L HG+ + + PI ++ Q
Sbjct: 110 SQGKMQIATGKYHTLLINNSK--VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQ 167
Query: 128 ISCGDSHCLAVTMEGEVQSWGRNQNGQLG-LGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
+S +H V G+V + G N + G L T+ P+ ++ +G P K VAAG
Sbjct: 168 VSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHF 227
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSS 246
+V ++ G Y G +G LG GD DR +P+ V + ++ +A G + ++V+
Sbjct: 228 TVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK-TIGPVVQIAAGPSYVLAVTQ 286
Query: 247 SGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDK--LICQVSGGWRHSMALTSCGQLYG 304
G ++++G LGHG+ +D L P ++A K I +VS G H++AL S G++Y
Sbjct: 287 DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYT 346
Query: 305 WGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQ 364
WG G +G GD D+ P + ++ VQ+ R T + E +Y +G G
Sbjct: 347 WGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGS 406
Query: 365 L-----GQGDTVDRNSPKIIEAL 382
L G D V R P+++E L
Sbjct: 407 LGFPDRGVSDKVLR--PRVLECL 427
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)
Query: 127 QISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVP-QKIQTFQGVPIKMVAAGAE 185
QI+ G H L + +V S G + +G L G+ V I+ + V+A
Sbjct: 115 QIATGKYHTLLIN-NSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 186 HSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMI---------MVAC 236
HS + ++G++ L GD + +S + R K++ VA
Sbjct: 174 HSAFVLQSGQV----------LTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAA 223
Query: 237 GWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSD-KLICQVSGGWRHSMA 295
G T+ +S G +T G + +GQLGHGD D VP +E L + Q++ G + +A
Sbjct: 224 GLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLA 283
Query: 296 LTSCGQLYGWGWNKFGQVGVGDNVDRSAP--VQVKFPHDQKVVQISCGWRHTIAVTERAN 353
+T G +Y +G +G G+ D P +Q ++++S G H +A+
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGR 343
Query: 354 VYSWGRGTNGQLGQGDTVDRNSPKIIEALS 383
VY+WG+G G LG GD D+ +P+++ L+
Sbjct: 344 VYTWGKGYCGALGHGDENDKITPQVLVNLN 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 169 IQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQR 228
++T QG KM A ++ + N ++Y G G L G + + + ++
Sbjct: 107 VETSQG---KMQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCV--AFTPIEFPF 161
Query: 229 DKMI-MVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLV-PHKLEALSDKLICQV 286
+ V+ H+ V SG + T G + GH D + P +EAL QV
Sbjct: 162 PAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221
Query: 287 SGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQ-KVVQISCGWRHT 345
+ G ++ L+ G Y G N GQ+G GD +DR P V+F VVQI+ G +
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Query: 346 IAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEALSVDG 386
+AVT+ +VYS+G G+N LG G+ D P++I+A G
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 171/321 (53%), Gaps = 29/321 (9%)
Query: 33 LLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEV 92
+++ ++ +WG GEDGQLG G +++ ++ AL+ V SV G+ +++A D +
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGT-M 59
Query: 93 YSWGWGDFGRLGHGNSSDL-FIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQ 151
++WGW G LGH + IP ++AL ++I Q + G HCLAV +G +WG N+
Sbjct: 60 FTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 152 NGQ---------LGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWG-- 200
GQ +G D ++P++ + ++ VAAG HSV +T G ++ WG
Sbjct: 120 YGQCGEEPLKDEMGRPVRRDIVIPKRCAPK--LTVRQVAAGGTHSVVLTREGHVWTWGQP 177
Query: 201 WGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQ 260
W GD +P +V ++ R ++A G H +++ G L +G ++YGQ
Sbjct: 178 WPP------GDIKQISVPVRVQGLENVR----LIAVGAFHNLALEEDGRLLAWGNNEYGQ 227
Query: 261 LGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVD 320
LG GD + P ++ L D + ++ G HS ALT G++YGWG + G++G+GDN D
Sbjct: 228 LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDN-D 286
Query: 321 RSA---PVQVKFPHDQKVVQI 338
+S+ P +V ++ ++Q+
Sbjct: 287 KSSKMVPQKVNLLAEEDIIQV 307
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 25/305 (8%)
Query: 92 VYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQ 151
+ +WG G+ G+LG G + + + AL+ ++ + G + LA+ +G + +WG NQ
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 152 NGQLGLGTADDSL-VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG-- 208
G LG + +P +++ V I A G H +A+ + G Y WG YG G
Sbjct: 67 RGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
Query: 209 -LGD------RNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYG--WSKYG 259
L D R D IP++ + R VA G H++ ++ G ++T+G W
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVR----QVAAGGTHSVVLTREGHVWTWGQPWPP-- 180
Query: 260 QLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNV 319
GD++ VP +++ L + + V G H++AL G+L WG N++GQ+G GD
Sbjct: 181 ----GDIKQISVPVRVQGLENVRLIAV--GAFHNLALEEDGRLLAWGNNEYGQLGTGDTQ 234
Query: 320 DRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKII 379
S PV V+ D +V I+ G H+ A+T++ VY WGRG +G+LG GD D++S +
Sbjct: 235 PTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDN-DKSSKMVP 293
Query: 380 EALSV 384
+ +++
Sbjct: 294 QKVNL 298
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 143/282 (50%), Gaps = 23/282 (8%)
Query: 17 PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGH-GDTDDRLLPTLLSALDAQQVVSV 75
P V + +G+ +S+A+ + +WG + G LGH +T +P+ + AL ++
Sbjct: 37 PYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQA 96
Query: 76 ACGADHTIAYSDSRLEVYSWGWGDFGR---------LGHGNSSDLFIPQPIRALQGIRIK 126
A G H +A D + Y+WG ++G+ +G D+ IP+ R + ++
Sbjct: 97 AIGGWHCLAV-DDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVR 153
Query: 127 QISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
Q++ G +H + +T EG V +WG+ G VP ++Q + V +++A GA H
Sbjct: 154 QVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENV--RLIAVGAFH 207
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSS 246
++A+ E+G L WG YG LG GD P V +D ++ +A G H+ +++
Sbjct: 208 NLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLD--DLTLVDIAAGGWHSTALTD 265
Query: 247 SGGLFTYGWSKYGQLGHGDLED--YLVPHKLEALSDKLICQV 286
G ++ +G ++G+LG GD + +VP K+ L+++ I QV
Sbjct: 266 KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQV 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 11/161 (6%)
Query: 15 SPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVS 74
+P V ++AG +HSV L V +WG+ GD +P + L+ ++++
Sbjct: 147 APKLTVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIA 202
Query: 75 VACGADHTIAY-SDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDS 133
V GA H +A D RL +WG ++G+LG G++ P P++ L + + I+ G
Sbjct: 203 V--GAFHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGW 258
Query: 134 HCLAVTMEGEVQSWGRNQNGQLGLGTADDS--LVPQKIQTF 172
H A+T +GEV WGR ++G+LGLG D S +VPQK+
Sbjct: 259 HSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLL 299
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 176/364 (48%), Gaps = 27/364 (7%)
Query: 3 VDDQAQVEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPT 62
+ D+ + +++ + +++ G +H +AL SG V +WGRG GQLGHGD + LP
Sbjct: 33 LQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPK 92
Query: 63 LLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQG 122
L+S D + A G H+ SDS +++ G G FG+LGHG++ L P +
Sbjct: 93 LVSFFDDSVITQAAAGWSHSGFVSDSGC-IFTCGNGSFGQLGHGDTLSLSTPAKVSHFNN 151
Query: 123 IRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLV--PQKIQTFQGVPIKMV 180
+K ++CG H L + +V +G + GQLG + V P + + V + +
Sbjct: 152 DSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRI 211
Query: 181 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRH 240
+A +HS AI+ +G+ + WG G G D P+ + S R+ VA GW H
Sbjct: 212 SANGDHSAAISADGQFFSWGRGFCGG------PDVHAPQSLPSPLSFRE----VAVGWNH 261
Query: 241 TISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKL-------ICQVSGGWRHS 293
+ ++ G +F G + L + L EAL +K+ + Q++ G HS
Sbjct: 262 ALLLTVDGEVFKLGST----LNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHS 317
Query: 294 MALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPH---DQKVVQISCGWRHTIAVTE 350
A+T G++ WGW + GQ+G+G+ D+++P V K +++ CG T AV
Sbjct: 318 AAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYAVKR 377
Query: 351 RANV 354
+ +
Sbjct: 378 KQEL 381
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 162/344 (47%), Gaps = 51/344 (14%)
Query: 91 EVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRN 150
+V+SWG G G+LG D +PQ + I ++CG +H +A+T G+V +WGR
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 151 QNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLG 210
+GQLG G + +P+ + F I AAG HS ++++G ++ G G +G LG G
Sbjct: 76 SSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG 135
Query: 211 DRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGD--LED 268
D P KVS D + MVACG RH++ + + + +G K GQLG ++
Sbjct: 136 DTLSLSTPAKVS--HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKS 193
Query: 269 YLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN-----------------KFG 311
+P + L D + ++S HS A+++ GQ + WG F
Sbjct: 194 VNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFR 253
Query: 312 QVGVGDN----------------------------VDRSAPVQVKFPHDQ--KVVQISCG 341
+V VG N +D S + K P KV+QI+ G
Sbjct: 254 EVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAG 313
Query: 342 WRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEALSVD 385
H+ AVTE V +WG G +GQLG G+T D+ SP+++ S+D
Sbjct: 314 AEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSID 357
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 30/353 (8%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
IS G HS + G+ + WG+G+ G+LG G + +P L + + +A G H+
Sbjct: 37 ISCGLFHSGLTIDGD-LWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 83 IAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEG 142
+A + + +V++WG+G FG LGH + +P+ + +I I+ +H A+T G
Sbjct: 96 VALTH-QGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESG 154
Query: 143 EVQSWGRNQNGQLGLGTADDSL-------VPQKIQTFQGVPIKMVAAGAEHSVAITENGE 195
E+ WGR + VP K++ VP+ V+ G ++A+T+ G+
Sbjct: 155 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQ 213
Query: 196 LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGW 255
L+ WG LG GD W P V S L+ ++ +ACG H+++++ G + ++G
Sbjct: 214 LWNWGANSNYELGRGDNLGGWEPMPVPS--LEGVRITQIACGGYHSLALTEEGKVLSWGH 271
Query: 256 SKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMA-------LTSCGQLYGWGWN 308
+GQLG L + VP ++EAL+DK I ++ G S A LT G+L+ WG
Sbjct: 272 GGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNA 331
Query: 309 KFGQVGV-GDNVDRSAPVQVKF--------PHDQKVVQISCGWRHTIAVTERA 352
K Q+GV G ++ PV+V F PH KV+ IS G H + + R+
Sbjct: 332 KDFQLGVPGLPEIQTTPVEVNFLTEEDECQPH--KVISISIGASHALCLVSRS 382
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 20/346 (5%)
Query: 61 PTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRAL 120
P + A + + ++CG H+ D L + WG GD GRLG G + +F+P
Sbjct: 23 PGRIDADSSSFRIGISCGLFHSGLTIDGDLWI--WGKGDGGRLGFGQENSVFVPNLNPLF 80
Query: 121 QGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMV 180
+ I+ I+ G H +A+T +G+V +WG G LG LVP+++ I +
Sbjct: 81 EEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAI 140
Query: 181 AAGAEHSVAITENGELYGWG-------WGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIM 233
A H+ AITE+GELY WG G G + +P KV ++ + +
Sbjct: 141 ATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV---PVAS 197
Query: 234 VACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHS 293
V+CG T++++ G L+ +G + +LG GD P + +L I Q++ G HS
Sbjct: 198 VSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHS 257
Query: 294 MALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV----- 348
+ALT G++ WG GQ+G ++ P +++ D+K+V I+ G + A+
Sbjct: 258 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDW 317
Query: 349 --TERANVYSWGRGTNGQLG-QGDTVDRNSPKIIEALSVDGSCGQH 391
T+ ++ WG + QLG G + +P + L+ + C H
Sbjct: 318 FLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPH 363
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGE-------DGQLGHGDTDDRLLPTLLSALDAQQ 71
++ I+ +H+ A+ + WGR E G + +P+ + AL
Sbjct: 136 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP- 194
Query: 72 VVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCG 131
V SV+CG T+A + ++++WG LG G++ + P P+ +L+G+RI QI+CG
Sbjct: 195 VASVSCGGFFTMALTKEG-QLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACG 253
Query: 132 DSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAI- 190
H LA+T EG+V SWG +GQLG + + VP +I+ I +A+G S AI
Sbjct: 254 GYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAIT 313
Query: 191 ------TENGELYGWGWGRYGNLGL-GDRNDRWIPEKVSSV----DLQRDKMIMVACGWR 239
T+ GEL+ WG + LG+ G + P +V+ + + Q K+I ++ G
Sbjct: 314 GWDWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS 373
Query: 240 HTISVSS 246
H + + S
Sbjct: 374 HALCLVS 380
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 141/276 (51%), Gaps = 36/276 (13%)
Query: 104 GHGNSSDLFIPQP--IRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGT-- 159
GH + D F P + G+RI ++ G H LA++ G++ WG GQLGLG+
Sbjct: 193 GHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRI 252
Query: 160 ---ADDSLVP-------QKIQTF-----------------QGVPIKMVAAGAEHSVAITE 192
+ L+P K ++F G IK ++ G HS AIT+
Sbjct: 253 KMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITD 312
Query: 193 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFT 252
G L +GWG YG G G+ ND+ P VS V R M VA G HTI +SS G ++
Sbjct: 313 AGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVR--MESVAAGLWHTICISSDGKVYA 370
Query: 253 YGWSKYGQLGHGDLEDYLVPHKLEA--LSDKLICQVSGGWRHSMALTSCGQLYGWGWNKF 310
+G +++GQLG G ++P L+ L K VS G RHS L GQL WGWNK+
Sbjct: 371 FGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKY 430
Query: 311 GQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTI 346
GQ+G+GD DR+ P QV+ ++ +++CGW HT+
Sbjct: 431 GQLGLGDTNDRNIPTQVQL-DGCRLRKVACGWWHTL 465
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 137/260 (52%), Gaps = 35/260 (13%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGD-----TDDRLLPTL---------- 63
R+ ++ G H++AL + WG G +GQLG G + L+P L
Sbjct: 215 RITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERS 274
Query: 64 --------------LSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSS 109
S Q + +++CG H+ A +D+ + ++GWG +G+ GHGN++
Sbjct: 275 FILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAG-GLITFGWGLYGQCGHGNTN 333
Query: 110 DLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKI 169
D P + ++ +R++ ++ G H + ++ +G+V ++G NQ GQLG GT ++P+ +
Sbjct: 334 DQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLL 393
Query: 170 --QTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQ 227
Q +G K V+ GA HS + E+G+L WGW +YG LGLGD NDR IP + V L
Sbjct: 394 DGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIP---TQVQLD 450
Query: 228 RDKMIMVACGWRHTISVSSS 247
++ VACGW HT+ + S
Sbjct: 451 GCRLRKVACGWWHTLLLGDS 470
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 72/408 (17%)
Query: 26 GASHSVALLSGNAVCSWGRGED-GQL-----GHGDTDDRL-LPTLLSALDAQQVVSVACG 78
G ++A+ + +WG +D GQ HG+T + LPT VV + G
Sbjct: 60 GCGFAMAISEKGKLITWGSTDDEGQSYVASGKHGETPEPFPLPT------EAPVVQASSG 113
Query: 79 ADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQ--PIRALQGIRIKQ---ISCGDS 133
H +++ E ++WGW + IP P+ Q +Q S G +
Sbjct: 114 WAHCAVVTETG-EAFTWGWKEC------------IPSKDPVGKQQSGSSEQGDIASQGSN 160
Query: 134 HCLAVTMEGEVQSWGRNQNGQLGLGTADD------------SLVPQKIQTFQGVPIKMVA 181
T++ E Q G + + TA D + P + GV I VA
Sbjct: 161 AASGTTLQNENQKVGEESVKRRRVSTAKDETEGHTSGGDFFATTPSLVSVGLGVRITSVA 220
Query: 182 AGAEHSVAITENGELYGWGWGRYGNLGLGDR-----NDRWIP------------------ 218
G H++A+++ G+++GWG+G G LGLG R + IP
Sbjct: 221 TGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQG 280
Query: 219 -EKVSSVDLQRDK---MIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHK 274
+S R+ + ++CG RH+ +++ +GGL T+GW YGQ GHG+ D L P
Sbjct: 281 GTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMA 340
Query: 275 LEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAP--VQVKFPHD 332
+ + + V+ G H++ ++S G++Y +G N+FGQ+G G + P + +
Sbjct: 341 VSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEG 400
Query: 333 QKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIE 380
+ +SCG RH+ + E + WG GQLG GDT DRN P ++
Sbjct: 401 KHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQ 448
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 31/265 (11%)
Query: 61 PTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFI-PQPIRA 119
P+L+S ++ SVA G HT+A SD +++ WG+G G+LG G+ + P I
Sbjct: 205 PSLVSVGLGVRITSVATGGRHTLALSDLG-QIWGWGYGGEGQLGLGSRIKMVSSPHLIPC 263
Query: 120 LQGI----------------------------RIKQISCGDSHCLAVTMEGEVQSWGRNQ 151
L+ I IK ISCG H A+T G + ++G
Sbjct: 264 LESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGL 323
Query: 152 NGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 211
GQ G G +D L P + + V ++ VAAG H++ I+ +G++Y +G ++G LG G
Sbjct: 324 YGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGT 383
Query: 212 RNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLV 271
+ +P + +L+ V+CG RH+ ++ G L +GW+KYGQLG GD D +
Sbjct: 384 DHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNI 443
Query: 272 PHKLEALSDKLICQVSGGWRHSMAL 296
P +++ L + +V+ GW H++ L
Sbjct: 444 PTQVQ-LDGCRLRKVACGWWHTLLL 467
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Query: 16 PPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSV 75
P + + IS G HS A+ + ++G G GQ GHG+T+D+L P +S + + ++ SV
Sbjct: 293 PGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESV 352
Query: 76 ACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPI--RALQGIRIKQISCGDS 133
A G HTI S S +VY++G FG+LG G +P+ + + L+G K +SCG
Sbjct: 353 AAGLWHTICIS-SDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGAR 411
Query: 134 HCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 190
H + +G++ WG N+ GQLGLG +D +P ++Q G ++ VA G H++ +
Sbjct: 412 HSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQ-LDGCRLRKVACGWWHTLLL 467
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 136/342 (39%), Gaps = 81/342 (23%)
Query: 105 HGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWG------------RNQN 152
HG + + F P P A + Q S G +HC VT GE +WG + Q+
Sbjct: 92 HGETPEPF-PLPTEA----PVVQASSGWAHCAVVTETGEAFTWGWKECIPSKDPVGKQQS 146
Query: 153 GQ--------LGLGTADDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITENGELYGWGWG 202
G G A + + + Q + V + V+ + + T G+ +
Sbjct: 147 GSSEQGDIASQGSNAASGTTLQNENQKVGEESVKRRRVSTAKDETEGHTSGGDFFATTPS 206
Query: 203 RYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLG 262
++GLG R + VA G RHT+++S G ++ +G+ GQLG
Sbjct: 207 LV-SVGLGVR------------------ITSVATGGRHTLALSDLGQIWGWGYGGEGQLG 247
Query: 263 HGD-LEDYLVPHKLEALSD----------------------------KLICQVSGGWRHS 293
G ++ PH + L + I +S G RHS
Sbjct: 248 LGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHS 307
Query: 294 MALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERAN 353
A+T G L +GW +GQ G G+ D+ P+ V ++ ++ G HTI ++
Sbjct: 308 AAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGK 367
Query: 354 VYSWGRGTNGQLGQGDTVDRNSPKIIEALSVDG------SCG 389
VY++G GQLG G P++++ +++G SCG
Sbjct: 368 VYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCG 409
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 3 VDDQAQVEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPT 62
+DQ + A + R+ ++AG H++ + S V ++G + GQLG G +LP
Sbjct: 332 TNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPR 391
Query: 63 LLSA--LDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRAL 120
LL L+ + +V+CGA H+ ++ ++ WGW +G+LG G+++D IP ++ L
Sbjct: 392 LLDGQNLEGKHAKAVSCGARHSAVLAEDG-QLLCWGWNKYGQLGLGDTNDRNIPTQVQ-L 449
Query: 121 QGIRIKQISCGDSHCL 136
G R+++++CG H L
Sbjct: 450 DGCRLRKVACGWWHTL 465
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 185/387 (47%), Gaps = 50/387 (12%)
Query: 6 QAQVEATAVSPPR---------RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTD 56
+ +E VSP R R + + H VAL +WGR E GQLGHGD
Sbjct: 37 KGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMI 96
Query: 57 DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFI--- 113
R PT++S L ++V A G +HT+ SD + +GW +G+LG G++ + F+
Sbjct: 97 QRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDG-QSLGFGWNKYGQLGLGSAKNGFVSVE 155
Query: 114 --PQPIRALQGIRIKQISCGDSHC--LAVTMEGEVQSWGRNQNGQLGLGTAD-----DSL 164
P+ + + ++CG L+ T + + G Q GQLG GT + DS
Sbjct: 156 VESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSS 215
Query: 165 V---------PQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDR 215
V P+ I + G I VA G H+VA+ +NG +Y WG+G YG LG ++ D
Sbjct: 216 VRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDE 275
Query: 216 WIPEKVSSVDLQRDKMI----MVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLV 271
W P ++ QR+ ++ +++ G + S ++GG Y W K G +D++
Sbjct: 276 WAPRRIDV--FQRNNVLPPNAILSAGSAN--SACTAGGGQLYMWGKIKNNG----DDWMY 327
Query: 272 PHKLEALSD-KLICQVSGGWRHSM-ALTSCGQLYGWGWNKFGQVGVGDNVDRS--APVQV 327
P + LS L SG H + A +SC WG ++G++G G N +S AP +V
Sbjct: 328 PKPMMDLSGWNLRWMDSGSMHHFVGADSSC---ISWGHAQYGELGYGPNGQKSSAAPKKV 384
Query: 328 KFPHDQKVVQISCGWRHTIAVTERANV 354
V+ ++CG+ H++ + +R ++
Sbjct: 385 DMLEGMHVMGVACGFCHSMVIVDRTDI 411
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 25/291 (8%)
Query: 97 WGDFGRLGHGNSSDLFIPQPIRALQGIRIKQIS--CGDSHCLAVTMEGEVQSWGRNQNGQ 154
W G+ +L P +R L G+ I+ ++ C HC+A+ +EG +WGRN+ GQ
Sbjct: 30 WDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQ 89
Query: 155 LGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 214
LG G P + I AAG H+V ++++G+ G+GW +YG LGLG +
Sbjct: 90 LGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKN 149
Query: 215 RWIPEKVSSVDLQ---RDKMIMVACGWRHTISVSSSGG--LFTYGWSKYGQLGHG----- 264
++ +V S L D++ VACG T+ +SS+ G + T G +YGQLGHG
Sbjct: 150 GFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEF 209
Query: 265 DLEDYLV---------PHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGV 315
+++D V P + +L+ + I +V+ G H++A+ G +Y WG+ +G++G
Sbjct: 210 NMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGH 269
Query: 316 GDNVDRSAPVQVKFPHDQKVVQ----ISCGWRHTIAVTERANVYSWGRGTN 362
+ D AP ++ V+ +S G ++ +Y WG+ N
Sbjct: 270 REQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKN 320
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 28/250 (11%)
Query: 158 GTADDSLV-PQKIQTFQGVPIKMVAAGAE--HSVAITENGELYGWGWGRYGNLGLGDRND 214
G + +LV P +++ GV I+ VA G H VA+ G Y WG G LG GD
Sbjct: 38 GAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQ 97
Query: 215 RWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHK 274
R P VS L + K++ A G HT+ VS G +GW+KYGQLG G ++ V +
Sbjct: 98 RDRPTVVSG--LSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVE 155
Query: 275 LEA------LSDKLICQVSGGWRHSMALTSC--GQLYGWGWNKFGQVGVG-DNVDRSAPV 325
+E+ +SD+ + V+ G ++ L+S + G ++GQ+G G DN
Sbjct: 156 VESTPLPCVVSDE-VTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDS 214
Query: 326 QVKFPHD-------------QKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVD 372
V+ ++ + +V+++CG HT+AV + VY+WG G G+LG + D
Sbjct: 215 SVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKD 274
Query: 373 RNSPKIIEAL 382
+P+ I+
Sbjct: 275 EWAPRRIDVF 284
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 158/321 (49%), Gaps = 31/321 (9%)
Query: 90 LEVYSWGWGDFGRLGHGNSSDLFIPQPI-----RALQGIRIKQ---------------IS 129
L+++SWG G G+LG G P P+ R+ Q + Q IS
Sbjct: 48 LQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGIS 107
Query: 130 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVA 189
CG H +T++G++ WG+ G+LG G + VP F+ I+ +A G HSVA
Sbjct: 108 CGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVA 166
Query: 190 ITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGG 249
+T G+++ WG+G +G LG +P +V D K+ +A HT +++ SG
Sbjct: 167 LTHQGDVFTWGYGGFGALGHKVYTRELVPRRVD--DSWDCKISAIATSGTHTAAITESGE 224
Query: 250 LFTYGWSK-------YGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQL 302
L+ +G + G + VP K++AL+ + VS G +MALT GQL
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMALTKEGQL 283
Query: 303 YGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTN 362
+ WG N ++G GDN+ P+ V ++ QI+CG H++A+TE V SWG G +
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 343
Query: 363 GQLGQGDTVDRNSPKIIEALS 383
GQLG ++ P IEAL+
Sbjct: 344 GQLGSSSLRNQKVPTEIEALA 364
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 33/381 (8%)
Query: 39 VCSWGRGEDGQLGHGDTDDRLLPTLLSAL-----------------DAQQV---VSVACG 78
+ SWGRG GQLG G + R+ P+ ++ L DA + ++CG
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCG 109
Query: 79 ADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAV 138
H+ D L + WG GD GRLG G + +F+P + I+ I+ G H +A+
Sbjct: 110 LFHSGLTIDGDLWI--WGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167
Query: 139 TMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYG 198
T +G+V +WG G LG LVP+++ I +A H+ AITE+GELY
Sbjct: 168 THQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYM 227
Query: 199 WG-------WGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLF 251
WG G G + +P KV ++ + + V+CG T++++ G L+
Sbjct: 228 WGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV---PVASVSCGGFFTMALTKEGQLW 284
Query: 252 TYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFG 311
+G + +LG GD P + +L I Q++ G HS+ALT G++ WG G
Sbjct: 285 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHG 344
Query: 312 QVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLG-QGDT 370
Q+G ++ P +++ D+K+V I+ G + A+T+ ++ WG + QLG G
Sbjct: 345 QLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLP 404
Query: 371 VDRNSPKIIEALSVDGSCGQH 391
+ +P + L+ + C H
Sbjct: 405 EIQTTPVEVNFLTEEDECQPH 425
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 18/290 (6%)
Query: 23 ISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHT 82
I+ G HSVAL V +WG G G LGH L+P + ++ ++A HT
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHT 216
Query: 83 IAYSDSRLEVYSWGW--GD-----FGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHC 135
A ++S E+Y WG GD G L +P ++AL + + +SCG
Sbjct: 217 AAITESG-ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFT 274
Query: 136 LAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGE 195
+A+T EG++ +WG N N +LG G P + + +GV I +A G HS+A+TE G+
Sbjct: 275 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGK 334
Query: 196 LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGW 255
+ WG G +G LG ++ +P ++ + L K++ +A G + +++ G L+ +G
Sbjct: 335 VLSWGHGGHGQLGSSSLRNQKVPTEIEA--LADKKIVFIASGGSSSAAITDGGELWMWGN 392
Query: 256 SKYGQLGHGDL-EDYLVPHKLEALSDKLICQ------VSGGWRHSMALTS 298
+K QLG L E P ++ L+++ CQ +S G H++ L S
Sbjct: 393 AKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 442
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 16/241 (6%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRL--------LPTLLSALDAQ 70
++ I+ +H+ A+ + WGR E+G G R +P+ + AL
Sbjct: 205 KISAIATSGTHTAAITESGELYMWGR-EEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP 263
Query: 71 QVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISC 130
V SV+CG T+A + ++++WG LG G++ + P P+ +L+G+RI QI+C
Sbjct: 264 -VASVSCGGFFTMALTKEG-QLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIAC 321
Query: 131 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 190
G H LA+T EG+V SWG +GQLG + + VP +I+ I +A+G S AI
Sbjct: 322 GGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Query: 191 TENGELYGWGWGRYGNLGL-GDRNDRWIPEKVSSV----DLQRDKMIMVACGWRHTISVS 245
T+ GEL+ WG + LG+ G + P +V+ + + Q K+I ++ G H + +
Sbjct: 382 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLV 441
Query: 246 S 246
S
Sbjct: 442 S 442
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 223/494 (45%), Gaps = 90/494 (18%)
Query: 18 RRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSAL-----DAQQV 72
R+++ ++AG +H++AL V SWGRG G+LG G D L+P L+ D ++
Sbjct: 16 RKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRI 75
Query: 73 VSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRAL------------ 120
V VA GA H++A SD V+ WG+ +G+LG + L P I+ L
Sbjct: 76 VGVAAGAYHSLAVSDDG-SVWCWGYNIYGQLGFDGENSL-APCLIKNLFERETSSSSLND 133
Query: 121 ------QGIRIKQISCGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTADDSL-VPQKIQT 171
+++ + G LA+ G + WG Q+ + + S+ +P I
Sbjct: 134 SGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 172 FQGVPIKMVAAGAEHSVAITENGE-----------LYGWGWGRYGNLGLGDRNDRWIPEK 220
F G + VA G EH VA+ G+ LY WG +G LGLGD R P+
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQT 253
Query: 221 VSSVDLQRDKMIM-VACGWRHTISVSSSGG-------LFTYGWSKYGQLGHGDLEDYLVP 272
V + + + + +ACG HT ++ +T+G+ + GQLGH + +P
Sbjct: 254 VETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLP 313
Query: 273 HKLEALSDK-LICQVSGGWRHSMALTSCGQLYGWGWNK---------FGQVGVGDNVDRS 322
+ L + + V G H+ ++S G ++ WG + F +V GD+ S
Sbjct: 314 EPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDD---S 370
Query: 323 APVQV-----KFPHDQKVVQISCGWRHTIAVTERA-NVYSWGRGTNGQLGQGDTVDRNSP 376
P ++ +F + VQ+SCG HT+ V + ++SWGRG NG LG G+ D P
Sbjct: 371 VPRKISGGSSRF---RDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVP 427
Query: 377 KII----------EALSVDGSCGQHIESSNTDQISGKSLSS---LSERYAVVPDETVSGQ 423
++ E + DG +S++T++I K L S + ERYA + ++ G+
Sbjct: 428 TLVFWPNELKPEKEEVPDDG------KSASTEEI--KRLESKLMVMERYASILHGSIFGK 479
Query: 424 TANPGNGDRFDLSV 437
N + L V
Sbjct: 480 PFNEEEDIPYSLRV 493
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 161 DDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDR-----NDR 215
D S +P + GV I VAAG H++A+++ G+++GWG+G G LGLG R +
Sbjct: 220 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPH 279
Query: 216 WIP-------EKVSSVDLQRDKMIM-----------VACGWRHTISVSSSGGLFTYGWSK 257
IP K +S + ++ +ACG RH+ ++ +G L T+GW
Sbjct: 280 PIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGL 339
Query: 258 YGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGD 317
YGQ G G +D L P + +L I +V+ G H+ +S G +Y +G N+FGQ+G G
Sbjct: 340 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGC 399
Query: 318 NVDRSAPVQVKFPH--DQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNS 375
+ + P ++ P+ + V ISCG RHT +T+ V+ WG GQLG GD +DRN+
Sbjct: 400 DQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNA 459
Query: 376 P---KIIEALSVDGSCG 389
P +I + + +CG
Sbjct: 460 PAEVRIKDCFPKNIACG 476
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 133/261 (50%), Gaps = 30/261 (11%)
Query: 113 IPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLV-PQKIQT 171
+P + G+RI ++ G H LA++ G+V WG GQLGLG+ + P I
Sbjct: 224 LPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPC 283
Query: 172 FQ------------------------GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNL 207
+ G +K +A G HS IT+ G L +GWG YG
Sbjct: 284 IEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQC 343
Query: 208 GLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLE 267
G G +D P VSS L ++ VA G HT SS G ++ +G +++GQLG G +
Sbjct: 344 GQGSTDDELSPTCVSS--LLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQ 401
Query: 268 DYLVPHKLEA--LSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPV 325
+P LEA L + + +S G RH+ +T G+++ WGWNK+GQ+G+GD +DR+AP
Sbjct: 402 AETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPA 461
Query: 326 QVKFPHDQKVVQISCGWRHTI 346
+V+ D I+CGW HT+
Sbjct: 462 EVRI-KDCFPKNIACGWWHTL 481
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 138/268 (51%), Gaps = 27/268 (10%)
Query: 54 DTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFI 113
+ D LP L+S ++VSVA G HT+A SD +V+ WG+G G+LG G+ L
Sbjct: 218 NIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRVRLVS 276
Query: 114 -PQPIRALQ------------------------GIRIKQISCGDSHCLAVTMEGEVQSWG 148
P PI ++ G +K+I+CG H +T G + ++G
Sbjct: 277 SPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFG 336
Query: 149 RNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 208
GQ G G+ DD L P + + G+ I+ VAAG H+ + +G++Y +G ++G LG
Sbjct: 337 WGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG 396
Query: 209 LGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLED 268
G +P+ + + +L+ + ++CG RHT ++ G +F +GW+KYGQLG GD+ D
Sbjct: 397 TGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVID 456
Query: 269 YLVPHKLEALSDKLICQVSGGWRHSMAL 296
P ++ + D ++ GW H++ L
Sbjct: 457 RNAPAEVR-IKDCFPKNIACGWWHTLLL 483
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGA 79
V I+ G HS + A+ ++G G GQ G G TDD L PT +S+L ++ VA G
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGL 372
Query: 80 DHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRA--LQGIRIKQISCGDSHCLA 137
HT S S +VY++G FG+LG G +P+ + A L+ + +K ISCG H
Sbjct: 373 WHTTCAS-SDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAV 431
Query: 138 VTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 190
+T EG V WG N+ GQLG+G D P +++ P K +A G H++ +
Sbjct: 432 ITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFP-KNIACGWWHTLLL 483
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 67/350 (19%)
Query: 114 PQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLG--LGTADDSLVPQKIQT 171
P+P + +++ G +HC+AVT +V +WG + G G D + I +
Sbjct: 108 PEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDSCERNI-S 166
Query: 172 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSS-------- 223
F + + G + S + E GR G G + R P K ++
Sbjct: 167 FSTEQVSSSSQGKKSSGGTSSQVE------GRGG--GEPTKKRRISPSKQAAENSSQSDN 218
Query: 224 VDLQR----------DKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLV-P 272
+DL +++ VA G RHT+++S G ++ +G+ GQLG G + P
Sbjct: 219 IDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSP 278
Query: 273 HKLEA---------------LSDKLIC---------QVSGGWRHSMALTSCGQLYGWGWN 308
H + +S + C +++ G RHS +T G L +GW
Sbjct: 279 HPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWG 338
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQG 368
+GQ G G D +P V ++ +++ G HT + +VY++G GQLG G
Sbjct: 339 LYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTG 398
Query: 369 DTVDRNSPKIIEALSVDGSCGQHIESSNTDQISGKSLSSLSERYAVVPDE 418
PK++EA N + ++ K++S + AV+ DE
Sbjct: 399 CDQAETLPKLLEA-------------PNLENVNVKTISCGARHTAVITDE 435
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSA--LDAQQVVSVA 76
R+ ++AG H+ S V ++G + GQLG G LP LL A L+ V +++
Sbjct: 364 RIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTIS 423
Query: 77 CGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCL 136
CGA HT +D V+ WGW +G+LG G+ D P +R ++ K I+CG H L
Sbjct: 424 CGARHTAVITDEG-RVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTL 481
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 181/382 (47%), Gaps = 22/382 (5%)
Query: 25 AGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIA 84
AG HSVA+ S V ++G GQLGHG T+D + +L +++ A GA T+
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209
Query: 85 YSDSRLEVYSWGWGDFGRLGHGN--SSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEG 142
SD +VY+ G FG +G + + PQ + +L+ I + Q + G+ ++ EG
Sbjct: 210 ISDDG-KVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 268
Query: 143 EVQSWGRNQNGQLGLGTADDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT--ENG-ELYG 198
+V ++ +G+LG T + P+ + + VP+ +AAG + +A+ NG +Y
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYS 328
Query: 199 WGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKY 258
G G G LG G R D P + + + +VA G H V G + T+GW +Y
Sbjct: 329 VGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRY 388
Query: 259 GQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDN 318
G LGHG+ E VP +E LS V+ G + ++ G +Y +G + +G +
Sbjct: 389 GCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPS 448
Query: 319 VDRS--------APVQVKFPH--DQKVVQISCG----WR-HTIAVTERANVYSWGRGTNG 363
D +P V ++++VQIS W HT A+TE ++++G G G
Sbjct: 449 FDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQG 508
Query: 364 QLGQGDTVDRNSPKIIEALSVD 385
QLG ++ + E + +D
Sbjct: 509 QLGTELGKNQKERCVPEKVDID 530
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 29/351 (8%)
Query: 3 VDDQAQVEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHG--DTDDRLL 60
+D+A+++ R++ +AGA+ ++ + V + G+ G+ +G T
Sbjct: 180 TEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTT 239
Query: 61 PTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIR-A 119
P L+++L VV A G ++ A +VY++ WG+ GRLGH + P+P+
Sbjct: 240 PQLVTSLKNIFVVQAAIG-NYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGP 298
Query: 120 LQGIRIKQISCGDSHCLAVTMEGE---VQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVP 176
L+ + + QI+ G + LA+ + V S G G+LG G+ D P+ I+ FQ +
Sbjct: 299 LENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILN 358
Query: 177 I--KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMV 234
+ ++VAAGA H+ + ++G + WGWGRYG LG G+ +P+ V L K + V
Sbjct: 359 LQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEG--LSHVKAVHV 416
Query: 235 ACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLED--------YLVPHKLEALS--DKLIC 284
A G T VS G ++++G + LGH D L P + +L ++ +
Sbjct: 417 ATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMV 476
Query: 285 QVSGG----WR-HSMALTSCGQLYGWGWNKFGQVG--VGDN-VDRSAPVQV 327
Q+S W H+ ALT G+L+ +G GQ+G +G N +R P +V
Sbjct: 477 QISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKV 527
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 14/267 (5%)
Query: 127 QISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
Q G H +AVT +GEV ++G N +GQLG G +D Q +++ QGV I AAGA
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAAR 206
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDLQRDKMIMVACGWRHTISV 244
++ I+++G++Y G +G G + + + P+ V+S L+ ++ A G T +
Sbjct: 207 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTS--LKNIFVVQAAIGNYFTAVL 264
Query: 245 SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLE-ALSDKLICQVSGGWRHSMALTSCG--- 300
S G ++T+ W G+LGH + P L L + + Q++ G+ + +AL +C
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLAL-ACQPNG 323
Query: 301 -QLYGWGWNKFGQVGVGDNVDRSAP---VQVKFPHDQKVVQISCGWRHTIAVTERANVYS 356
+Y G G++G G D P Q + + Q V + W H V + V +
Sbjct: 324 MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW-HAAVVGQDGRVCT 382
Query: 357 WGRGTNGQLGQGDTVDRNSPKIIEALS 383
WG G G LG G+ + PK++E LS
Sbjct: 383 WGWGRYGCLGHGNEECESVPKVVEGLS 409
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 227 QRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQV 286
+R+K VA G H+++V+S G ++T+G++ GQLGHG ED + +L I Q
Sbjct: 142 RREKSQAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQA 200
Query: 287 SGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDR--SAPVQVKFPHDQKVVQISCGWRH 344
+ G +M ++ G++Y G FG+ G + + P V + VVQ + G
Sbjct: 201 AAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 260
Query: 345 TIAVTERANVYSWGRGTNGQLGQ 367
T ++ VY++ G +G+LG
Sbjct: 261 TAVLSREGKVYTFSWGNDGRLGH 283
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 181/382 (47%), Gaps = 22/382 (5%)
Query: 25 AGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIA 84
AG HSVA+ S V ++G GQLGHG T+D + +L +++ A GA T+
Sbjct: 50 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 109
Query: 85 YSDSRLEVYSWGWGDFGRLGHGN--SSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEG 142
SD +VY+ G FG +G + + PQ + +L+ I + Q + G+ ++ EG
Sbjct: 110 ISDDG-KVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 168
Query: 143 EVQSWGRNQNGQLGLGTADDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT--ENG-ELYG 198
+V ++ +G+LG T + P+ + + VP+ +AAG + +A+ NG +Y
Sbjct: 169 KVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYS 228
Query: 199 WGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKY 258
G G G LG G R D P + + + +VA G H V G + T+GW +Y
Sbjct: 229 VGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRY 288
Query: 259 GQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDN 318
G LGHG+ E VP +E LS V+ G + ++ G +Y +G + +G +
Sbjct: 289 GCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPS 348
Query: 319 VDRS--------APVQVKFPH--DQKVVQISCG----WR-HTIAVTERANVYSWGRGTNG 363
D +P V ++++VQIS W HT A+TE ++++G G G
Sbjct: 349 FDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQG 408
Query: 364 QLGQGDTVDRNSPKIIEALSVD 385
QLG ++ + E + +D
Sbjct: 409 QLGTELGKNQKERCVPEKVDID 430
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 173/350 (49%), Gaps = 29/350 (8%)
Query: 4 DDQAQVEATAVSPPRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHG--DTDDRLLP 61
+D+A+++ R++ +AGA+ ++ + V + G+ G+ +G T P
Sbjct: 81 EDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTP 140
Query: 62 TLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRA-L 120
L+++L VV A G ++ A +VY++ WG+ GRLGH + P+P+ L
Sbjct: 141 QLVTSLKNIFVVQAAIG-NYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPL 199
Query: 121 QGIRIKQISCGDSHCLAVTMEGE---VQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPI 177
+ + + QI+ G + LA+ + V S G G+LG G+ D P+ I+ FQ + +
Sbjct: 200 ENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNL 259
Query: 178 --KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
++VAAGA H+ + ++G + WGWGRYG LG G+ +P+ V L K + VA
Sbjct: 260 QPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEG--LSHVKAVHVA 317
Query: 236 CGWRHTISVSSSGGLFTYGWSKYGQLGHGDLED--------YLVPHKLEALS--DKLICQ 285
G T VS G ++++G + LGH D L P + +L ++ + Q
Sbjct: 318 TGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQ 377
Query: 286 VSGG----WR-HSMALTSCGQLYGWGWNKFGQVG--VGDN-VDRSAPVQV 327
+S W H+ ALT G+L+ +G GQ+G +G N +R P +V
Sbjct: 378 ISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKV 427
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 14/267 (5%)
Query: 127 QISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEH 186
Q G H +AVT +GEV ++G N +GQLG G +D Q +++ QGV I AAGA
Sbjct: 47 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAAR 106
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDLQRDKMIMVACGWRHTISV 244
++ I+++G++Y G +G G + + + P+ V+S L+ ++ A G T +
Sbjct: 107 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTS--LKNIFVVQAAIGNYFTAVL 164
Query: 245 SSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEA-LSDKLICQVSGGWRHSMALTSCG--- 300
S G ++T+ W G+LGH + P L L + + Q++ G+ + +AL +C
Sbjct: 165 SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLAL-ACQPNG 223
Query: 301 -QLYGWGWNKFGQVGVGDNVDRSAP---VQVKFPHDQKVVQISCGWRHTIAVTERANVYS 356
+Y G G++G G D P Q + + Q V + W H V + V +
Sbjct: 224 MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW-HAAVVGQDGRVCT 282
Query: 357 WGRGTNGQLGQGDTVDRNSPKIIEALS 383
WG G G LG G+ + PK++E LS
Sbjct: 283 WGWGRYGCLGHGNEECESVPKVVEGLS 309
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 227 QRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQV 286
+R+K VA G H+++V+S G ++T+G++ GQLGHG ED + +L I Q
Sbjct: 42 RREKSQAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQA 100
Query: 287 SGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDR--SAPVQVKFPHDQKVVQISCGWRH 344
+ G +M ++ G++Y G FG+ G + + P V + VVQ + G
Sbjct: 101 AAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 160
Query: 345 TIAVTERANVYSWGRGTNGQLGQ 367
T ++ VY++ G +G+LG
Sbjct: 161 TAVLSREGKVYTFSWGNDGRLGH 183
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 16/280 (5%)
Query: 91 EVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRN 150
EV+SWG G +LG GN +P + +L G IK +S H +A++ GEV +WG
Sbjct: 151 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 210
Query: 151 QNGQLGLGTAD----DSLVPQKIQTFQGV---PIKMVAAGAEHSVAITENGELYGWGWGR 203
+ G+LG D + V Q G+ +K VAA H+V TE G++Y WG R
Sbjct: 211 RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNR 270
Query: 204 YGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGH 263
G LG + + P KV+S+ + K++ V+ +HT VS G +FT+G +K GQLG+
Sbjct: 271 EGQLGYTSVDTQATPRKVTSL---KAKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGY 327
Query: 264 G--DLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFG--QVGVGDNV 319
G + P ++ L K+ ++ H++ L + G++Y WG +V + N+
Sbjct: 328 GTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNL 387
Query: 320 DRSAPVQVKFPHDQ--KVVQISCGWRHTIAVTERANVYSW 357
++ + F + ++ I+ G H++A+ E + W
Sbjct: 388 KKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYW 427
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 118/224 (52%), Gaps = 10/224 (4%)
Query: 143 EVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWG 202
EV SWG N QLG G VP ++ + G IK+V+A HSVAI+ +GE+Y WG+G
Sbjct: 151 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 210
Query: 203 RYGNLGLGDRNDR------WIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWS 256
R G LG + + P +V S L ++ VA HT+ + G ++T+G +
Sbjct: 211 RGGRLGHPEFDIHSGQAAVITPRQVIS-GLGSRRVKAVAAAKHHTVIATEGGDVYTWGSN 269
Query: 257 KYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVG 316
+ GQLG+ ++ P K+ +L K++ VS +H+ ++ CG+++ WG NK GQ+G G
Sbjct: 270 REGQLGYTSVDTQATPRKVTSLKAKIVA-VSAANKHTAVVSDCGEVFTWGCNKEGQLGYG 328
Query: 317 --DNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWG 358
++ +P V + + I+ HT+ + VY+WG
Sbjct: 329 TSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 372
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 161/340 (47%), Gaps = 32/340 (9%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDR------LLP-TLLSALDAQQV 72
+ L+SA HSVA+ + V +WG G G+LGH + D + P ++S L +++V
Sbjct: 185 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 244
Query: 73 VSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGD 132
+VA HT+ ++ +VY+WG G+LG+ + P+ + +L+ +I +S +
Sbjct: 245 KAVAAAKHHTVIATEGG-DVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAAN 302
Query: 133 SHCLAVTMEGEVQSWGRNQNGQLGLGTADDS--LVPQKIQTFQGVPIKMVAAGAEHSVAI 190
H V+ GEV +WG N+ GQLG GT++ + P+ + +G +A+ H++ +
Sbjct: 303 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 362
Query: 191 TENGELYGWGWGRYG-NLGLGDRNDRWIPEKVSSVDLQRD-KMIMVACGWRHTISVSSSG 248
+GE+Y WG + RN + + + +R ++ +A G H+++++ G
Sbjct: 363 RNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDG 422
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
F + S + L +L +L K + +S G + A+TS G++Y W
Sbjct: 423 AFFYWVSS----------DSNLRCQQLHSLHGKTVVSISAGKYWASAVTSTGEVYMWD-- 470
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
G N AP + + ++ ++ G H + V
Sbjct: 471 -------GKNGKDIAPSLSRLHNLKRATTVAVGETHLLVV 503
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 175 VPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMV 234
P+ +V+ + ++ E++ WG G LG G+++ + +P +V S L + +V
Sbjct: 131 TPVDLVSGPVAQVIGEQQSSEVFSWGNGANYQLGTGNQHVQKVPGRVDS--LHGCFIKLV 188
Query: 235 ACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDY------LVPHK-LEALSDKLICQVS 287
+ H++++S+ G ++T+G+ + G+LGH + + + + P + + L + + V+
Sbjct: 189 SAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVA 248
Query: 288 GGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIA 347
H++ T G +Y WG N+ GQ+G +VD A + K+V +S +HT
Sbjct: 249 AAKHHTVIATEGGDVYTWGSNREGQLGY-TSVDTQATPRKVTSLKAKIVAVSAANKHTAV 307
Query: 348 VTERANVYSWGRGTNGQLGQG--DTVDRNSPKIIEAL 382
V++ V++WG GQLG G ++ SP++++ L
Sbjct: 308 VSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYL 344
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 18 RRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVAC 77
RRV ++A H+V G V +WG +GQLG+ D + P +++L A ++V+V+
Sbjct: 242 RRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSA 300
Query: 78 GADHTIAYSDSRLEVYSWGWGDFGRLGHG--NSSDLFIPQPIRALQGIRIKQISCGDSHC 135
HT SD EV++WG G+LG+G NS+ + P+ + L+G I+ H
Sbjct: 301 ANKHTAVVSDCG-EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHT 359
Query: 136 LAVTMEGEVQSWG------RNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVA 189
L + +GEV +WG R L A ++L+ + + + +AAG HS+A
Sbjct: 360 LVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLL--NFHRRRPLRLTAIAAGMVHSLA 417
Query: 190 ITENGELYGW 199
+ E+G + W
Sbjct: 418 LAEDGAFFYW 427
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 16/280 (5%)
Query: 91 EVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRN 150
EV+SWG G +LG GN +P + +L G IK +S H +A++ GEV +WG
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 151 QNGQLGLGTAD----DSLVPQKIQTFQGV---PIKMVAAGAEHSVAITENGELYGWGWGR 203
+ G+LG D + V Q G+ +K VAA H+V TE G++Y WG R
Sbjct: 214 RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNR 273
Query: 204 YGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGH 263
G LG + + P KV+S+ + K++ V+ +HT VS G +FT+G +K GQLG+
Sbjct: 274 EGQLGYTSVDTQATPRKVTSL---KAKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGY 330
Query: 264 G--DLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFG--QVGVGDNV 319
G + P ++ L K+ ++ H++ L + G++Y WG +V + N+
Sbjct: 331 GTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNL 390
Query: 320 DRSAPVQVKFPHDQ--KVVQISCGWRHTIAVTERANVYSW 357
++ + F + ++ I+ G H++A+ E + W
Sbjct: 391 KKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYW 430
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 118/224 (52%), Gaps = 10/224 (4%)
Query: 143 EVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWG 202
EV SWG N QLG G VP ++ + G IK+V+A HSVAI+ +GE+Y WG+G
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 203 RYGNLGLGDRNDR------WIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWS 256
R G LG + + P +V S L ++ VA HT+ + G ++T+G +
Sbjct: 214 RGGRLGHPEFDIHSGQAAVITPRQVIS-GLGSRRVKAVAAAKHHTVIATEGGDVYTWGSN 272
Query: 257 KYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVG 316
+ GQLG+ ++ P K+ +L K++ VS +H+ ++ CG+++ WG NK GQ+G G
Sbjct: 273 REGQLGYTSVDTQATPRKVTSLKAKIVA-VSAANKHTAVVSDCGEVFTWGCNKEGQLGYG 331
Query: 317 --DNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWG 358
++ +P V + + I+ HT+ + VY+WG
Sbjct: 332 TSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 161/340 (47%), Gaps = 32/340 (9%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDR------LLP-TLLSALDAQQV 72
+ L+SA HSVA+ + V +WG G G+LGH + D + P ++S L +++V
Sbjct: 188 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 73 VSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGD 132
+VA HT+ ++ +VY+WG G+LG+ + P+ + +L+ +I +S +
Sbjct: 248 KAVAAAKHHTVIATEGG-DVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAAN 305
Query: 133 SHCLAVTMEGEVQSWGRNQNGQLGLGTADDS--LVPQKIQTFQGVPIKMVAAGAEHSVAI 190
H V+ GEV +WG N+ GQLG GT++ + P+ + +G +A+ H++ +
Sbjct: 306 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 365
Query: 191 TENGELYGWGWGRYG-NLGLGDRNDRWIPEKVSSVDLQRD-KMIMVACGWRHTISVSSSG 248
+GE+Y WG + RN + + + +R ++ +A G H+++++ G
Sbjct: 366 RNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDG 425
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
F + S + L +L +L K + +S G + A+TS G++Y W
Sbjct: 426 AFFYWVSS----------DSNLRCQQLHSLHGKTVVSISAGKYWASAVTSTGEVYMWD-- 473
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
G N AP + + ++ ++ G H + V
Sbjct: 474 -------GKNGKDIAPSLSRLHNLKRATTVAVGETHLLVV 506
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 18 RRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVAC 77
RRV ++A H+V G V +WG +GQLG+ D + P +++L A ++V+V+
Sbjct: 245 RRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSA 303
Query: 78 GADHTIAYSDSRLEVYSWGWGDFGRLGHG--NSSDLFIPQPIRALQGIRIKQISCGDSHC 135
HT SD EV++WG G+LG+G NS+ + P+ + L+G I+ H
Sbjct: 304 ANKHTAVVSDCG-EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHT 362
Query: 136 LAVTMEGEVQSWG------RNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVA 189
L + +GEV +WG R L A ++L+ + + + +AAG HS+A
Sbjct: 363 LVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLL--NFHRRRPLRLTAIAAGMVHSLA 420
Query: 190 ITENGELYGW 199
+ E+G + W
Sbjct: 421 LAEDGAFFYW 430
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 16/216 (7%)
Query: 176 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
P+ V + SVA E++ WG G LG G+++ + +P +V S L + +V+
Sbjct: 139 PVAQVIGEQQSSVAT----EVFSWGNGANYQLGTGNQHVQKVPGRVDS--LHGCFIKLVS 192
Query: 236 CGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDY------LVPHK-LEALSDKLICQVSG 288
H++++S+ G ++T+G+ + G+LGH + + + + P + + L + + V+
Sbjct: 193 AAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAA 252
Query: 289 GWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
H++ T G +Y WG N+ GQ+G +VD A + K+V +S +HT V
Sbjct: 253 AKHHTVIATEGGDVYTWGSNREGQLGY-TSVDTQATPRKVTSLKAKIVAVSAANKHTAVV 311
Query: 349 TERANVYSWGRGTNGQLGQG--DTVDRNSPKIIEAL 382
++ V++WG GQLG G ++ SP++++ L
Sbjct: 312 SDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYL 347
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 16/280 (5%)
Query: 91 EVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRN 150
EV+SWG G +LG GN +P + +L G IK +S H +A++ GEV +WG
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 151 QNGQLGLGTAD----DSLVPQKIQTFQGV---PIKMVAAGAEHSVAITENGELYGWGWGR 203
+ G+LG D + V Q G+ +K VAA H+V TE G++Y WG R
Sbjct: 214 RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNR 273
Query: 204 YGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGH 263
G LG + + P KV+S+ + K++ V+ +HT VS G +FT+G +K GQLG+
Sbjct: 274 EGQLGYTSVDTQATPRKVTSL---KAKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGY 330
Query: 264 G--DLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFG--QVGVGDNV 319
G + P ++ L K+ ++ H++ L + G++Y WG +V + N+
Sbjct: 331 GTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNL 390
Query: 320 DRSAPVQVKFPHDQ--KVVQISCGWRHTIAVTERANVYSW 357
++ + F + ++ I+ G H++A+ E + W
Sbjct: 391 KKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYW 430
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 118/224 (52%), Gaps = 10/224 (4%)
Query: 143 EVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWG 202
EV SWG N QLG G VP ++ + G IK+V+A HSVAI+ +GE+Y WG+G
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 203 RYGNLGLGDRNDR------WIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWS 256
R G LG + + P +V S L ++ VA HT+ + G ++T+G +
Sbjct: 214 RGGRLGHPEFDIHSGQAAVITPRQVIS-GLGSRRVKAVAAAKHHTVIATEGGDVYTWGSN 272
Query: 257 KYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVG 316
+ GQLG+ ++ P K+ +L K++ VS +H+ ++ CG+++ WG NK GQ+G G
Sbjct: 273 REGQLGYTSVDTQATPRKVTSLKAKIVA-VSAANKHTAVVSDCGEVFTWGCNKEGQLGYG 331
Query: 317 --DNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWG 358
++ +P V + + I+ HT+ + VY+WG
Sbjct: 332 TSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 161/340 (47%), Gaps = 32/340 (9%)
Query: 20 VLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDR------LLP-TLLSALDAQQV 72
+ L+SA HSVA+ + V +WG G G+LGH + D + P ++S L +++V
Sbjct: 188 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 73 VSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGD 132
+VA HT+ ++ +VY+WG G+LG+ + P+ + +L+ +I +S +
Sbjct: 248 KAVAAAKHHTVIATEGG-DVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAAN 305
Query: 133 SHCLAVTMEGEVQSWGRNQNGQLGLGTADDS--LVPQKIQTFQGVPIKMVAAGAEHSVAI 190
H V+ GEV +WG N+ GQLG GT++ + P+ + +G +A+ H++ +
Sbjct: 306 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 365
Query: 191 TENGELYGWGWGRYG-NLGLGDRNDRWIPEKVSSVDLQRD-KMIMVACGWRHTISVSSSG 248
+GE+Y WG + RN + + + +R ++ +A G H+++++ G
Sbjct: 366 RNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDG 425
Query: 249 GLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWN 308
F + S + L +L +L K + +S G + A+TS G++Y W
Sbjct: 426 AFFYWVSS----------DSNLRCQQLHSLHGKTVVSISAGKYWASAVTSTGEVYMWD-- 473
Query: 309 KFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
G N AP + + ++ ++ G H + V
Sbjct: 474 -------GKNGKDIAPSLSRLHNLKRATTVAVGETHLLVV 506
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 18 RRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVAC 77
RRV ++A H+V G V +WG +GQLG+ D + P +++L A ++V+V+
Sbjct: 245 RRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSA 303
Query: 78 GADHTIAYSDSRLEVYSWGWGDFGRLGHG--NSSDLFIPQPIRALQGIRIKQISCGDSHC 135
HT SD EV++WG G+LG+G NS+ + P+ + L+G I+ H
Sbjct: 304 ANKHTAVVSDCG-EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHT 362
Query: 136 LAVTMEGEVQSWG------RNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVA 189
L + +GEV +WG R L A ++L+ + + + +AAG HS+A
Sbjct: 363 LVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLL--NFHRRRPLRLTAIAAGMVHSLA 420
Query: 190 ITENGELYGW 199
+ E+G + W
Sbjct: 421 LAEDGAFFYW 430
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 16/216 (7%)
Query: 176 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
P+ V + SVA E++ WG G LG G+++ + +P +V S L + +V+
Sbjct: 139 PVAQVIGEQQSSVAT----EVFSWGNGANYQLGTGNQHVQKVPGRVDS--LHGCFIKLVS 192
Query: 236 CGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDY------LVPHK-LEALSDKLICQVSG 288
H++++S+ G ++T+G+ + G+LGH + + + + P + + L + + V+
Sbjct: 193 AAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAA 252
Query: 289 GWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAV 348
H++ T G +Y WG N+ GQ+G +VD A + K+V +S +HT V
Sbjct: 253 AKHHTVIATEGGDVYTWGSNREGQLGY-TSVDTQATPRKVTSLKAKIVAVSAANKHTAVV 311
Query: 349 TERANVYSWGRGTNGQLGQG--DTVDRNSPKIIEAL 382
++ V++WG GQLG G ++ SP++++ L
Sbjct: 312 SDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYL 347
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 183/396 (46%), Gaps = 62/396 (15%)
Query: 39 VCSWGRGEDGQLGHGDTD------DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEV 92
V S+G G G LG + D PT++S L + + S++ G H++A + S E+
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSD-ISSISAGHYHSLAVTSSG-EI 103
Query: 93 YSWGWGDFGRLGH----GNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWG 148
++WG D G+LG + P+ + L+ + ++ A+ +G + WG
Sbjct: 104 WAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWG 163
Query: 149 RNQNGQLGLGTAD-DSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGW---GRY 204
R++ GQLGLG ++ VP +++ + V+ G H++A+T +G+++GWG+ GR
Sbjct: 164 RSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRV 223
Query: 205 GNLGL---------------------GDRNDRWIPEKVSSVDLQRDKMIM---------- 233
GN+GL GD N +KV + + M +
Sbjct: 224 GNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEET 283
Query: 234 -------VACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQV 286
+ACG H++ + G L + G + YGQLG + + P + + +
Sbjct: 284 CNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDI----TESPISI 339
Query: 287 SGGWRHSMALTSCGQ--LYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRH 344
+ G HS+A+ + G+ + WGWN+ Q+G G + P +V+ + +S G H
Sbjct: 340 AAGLGHSLAICNRGERNILSWGWNRSRQLGRGK--PENLPREVEGFDGESPASVSAGRVH 397
Query: 345 TIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIE 380
++ VTE+ + WG G NG+LG G + D P ++E
Sbjct: 398 SLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLE 433
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 65/353 (18%)
Query: 86 SDSRLEVYSWGWGDFGRLGHGNSS------DLFIPQPIRALQGIRIKQISCGDSHCLAVT 139
S R V S+G G+ G LG +SS D + P + L I IS G H LAVT
Sbjct: 40 SGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVT 98
Query: 140 MEGEVQSWGRNQNGQLGLGTADDSL----VPQKIQTFQGVPIKMVAAGAEHSVAITENGE 195
GE+ +WGRN GQLG D S P++++ + V ++ A S AI ++G
Sbjct: 99 SSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGS 158
Query: 196 LYGWGWGRYGNLGLGD-RNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYG 254
L+ WG + G LGLG+ + +P +V +L + ++ V+ GW H ++++ G +F +G
Sbjct: 159 LWVWGRSKRGQLGLGNGIIEARVPSRVE--NLAAEHVVKVSLGWGHALALTVDGKVFGWG 216
Query: 255 WSKYGQLGH------------------------GDL-----EDYLV-------------- 271
+ G++G+ GDL E +V
Sbjct: 217 YVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWE 276
Query: 272 PHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPH 331
P +E ++ + ++ G HS+ L G L G N +GQ+G PV +
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDIT--- 333
Query: 332 DQKVVQISCGWRHTIAVTERA--NVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
+ + I+ G H++A+ R N+ SWG + QLG+G N P+ +E
Sbjct: 334 -ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKP--ENLPREVEGF 383
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 176/399 (44%), Gaps = 77/399 (19%)
Query: 10 EATAVSP-PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGH----GDTDDRLLPTLL 64
E T VS P + ISAG HS+A+ S + +WGR ++GQLG D R P +
Sbjct: 73 EPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRV 132
Query: 65 SALD--------AQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNS-SDLFIPQ 115
L+ A VVS A G D ++ + WG G+LG GN + +P
Sbjct: 133 EGLENVNVQAAFASGVVSAAIGDDGSL---------WVWGRSKRGQLGLGNGIIEARVPS 183
Query: 116 PIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLG------------------- 156
+ L + ++S G H LA+T++G+V WG +G++G
Sbjct: 184 RVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSM 243
Query: 157 ----------LGTADDSLV--------------PQKIQTFQGVPIKMVAAGAEHSVAITE 192
L A+ +V P ++ + +A G++HS+ +
Sbjct: 244 KGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCH 303
Query: 193 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSG--GL 250
+G L G YG LG ++ P ++ + I +A G H++++ + G +
Sbjct: 304 DGTLLSAGSNIYGQLGRSKQDLGMKPVDIT------ESPISIAAGLGHSLAICNRGERNI 357
Query: 251 FTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKF 310
++GW++ QLG G E+ +P ++E + VS G HS+ +T G+ + WG K
Sbjct: 358 LSWGWNRSRQLGRGKPEN--LPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKN 415
Query: 311 GQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVT 349
G++G+G + D P+ ++ + V+Q G+ H++ +
Sbjct: 416 GRLGLGSSSDEPEPMLLE-DVEGCVLQAVAGFDHSLILV 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 56/303 (18%)
Query: 42 WGRGEDGQLGHGD-TDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDF 100
WGR + GQLG G+ + +P+ + L A+ VV V+ G H +A + +V+ WG+
Sbjct: 162 WGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDG-KVFGWGYVAD 220
Query: 101 GRLG---------------------HGNSSDLFI----------------------PQPI 117
GR+G H + DL + P +
Sbjct: 221 GRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLV 280
Query: 118 RALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPI 177
++ I+CG H L + +G + S G N GQLG D + P I PI
Sbjct: 281 EETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES---PI 337
Query: 178 KMVAAGAEHSVAITENGE--LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
+AAG HS+AI GE + WGW R LG G + +P +V D + V+
Sbjct: 338 S-IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGFDGESPAS--VS 392
Query: 236 CGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMA 295
G H++ V+ G + +G K G+LG G D P LE + + + Q G+ HS+
Sbjct: 393 AGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDV-EGCVLQAVAGFDHSLI 451
Query: 296 LTS 298
L +
Sbjct: 452 LVA 454
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 23 ISAGASHSVALLS--GNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGAD 80
I+AG HS+A+ + + SWG QLG G ++ LP + D + SV+ G
Sbjct: 339 IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGFDGESPASVSAGRV 396
Query: 81 HTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTM 140
H++ ++ + E + WG G GRLG G+SSD P + ++G ++ ++ G H L +
Sbjct: 397 HSLCVTE-KGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLILVA 454
Query: 141 E 141
E
Sbjct: 455 E 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 237 GWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMAL 296
G R T+ G L G S G G D P + L I +S G HS+A+
Sbjct: 41 GERRTVMSFGDGNLGALGLSSSSIPGMG--MDAYEPTVVSNLPSD-ISSISAGHYHSLAV 97
Query: 297 TSCGQLYGWGWNKFGQVG---VGDNVD-RSAPVQVKFPHDQKVVQISCGWRHTIAVTERA 352
TS G+++ WG N GQ+G + + D RS P +V+ + V + A+ +
Sbjct: 98 TSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDG 157
Query: 353 NVYSWGRGTNGQLGQGD-TVDRNSPKIIEALSVD 385
+++ WGR GQLG G+ ++ P +E L+ +
Sbjct: 158 SLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE 191
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 183/395 (46%), Gaps = 61/395 (15%)
Query: 39 VCSWGRGEDGQLGHGDTD------DRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEV 92
V S+G G G LG + D PT++S L + + S++ G H++A + S E+
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSD-ISSISAGHYHSLAVTSSG-EI 103
Query: 93 YSWGWGDFGRLGH---GNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGR 149
++WG D G+LG + P+ + L+ + ++ A+ +G + WGR
Sbjct: 104 WAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGR 163
Query: 150 NQNGQLGLGTAD-DSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGW---GRYG 205
++ GQLGLG ++ VP +++ + V+ G H++A+T +G+++GWG+ GR G
Sbjct: 164 SKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVG 223
Query: 206 NLGL---------------------GDRNDRWIPEKVSSVDLQRDKMIM----------- 233
N+GL GD N +KV + + M +
Sbjct: 224 NVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETC 283
Query: 234 ------VACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVS 287
+ACG H++ + G L + G + YGQLG + + P + + ++
Sbjct: 284 NEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDI----TESPISIA 339
Query: 288 GGWRHSMALTSCGQ--LYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHT 345
G HS+A+ + G+ + WGWN+ Q+G G + P +V+ + +S G H+
Sbjct: 340 AGLGHSLAICNRGERNILSWGWNRSRQLGRGK--PENLPREVEGFDGESPASVSAGRVHS 397
Query: 346 IAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIE 380
+ VTE+ + WG G NG+LG G + D P ++E
Sbjct: 398 LCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLE 432
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 158/352 (44%), Gaps = 64/352 (18%)
Query: 86 SDSRLEVYSWGWGDFGRLGHGNSS------DLFIPQPIRALQGIRIKQISCGDSHCLAVT 139
S R V S+G G+ G LG +SS D + P + L I IS G H LAVT
Sbjct: 40 SGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVT 98
Query: 140 MEGEVQSWGRNQNGQLG---LGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGEL 196
GE+ +WGRN GQLG + + D P++++ + V ++ A S AI ++G L
Sbjct: 99 SSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSL 158
Query: 197 YGWGWGRYGNLGLGD-RNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGW 255
+ WG + G LGLG+ + +P +V +L + ++ V+ GW H ++++ G +F +G+
Sbjct: 159 WVWGRSKRGQLGLGNGIIEARVPSRVE--NLAAEHVVKVSLGWGHALALTVDGKVFGWGY 216
Query: 256 SKYGQLGH------------------------GDL-----EDYLV--------------P 272
G++G+ GDL E +V P
Sbjct: 217 VADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEP 276
Query: 273 HKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHD 332
+E ++ + ++ G HS+ L G L G N +GQ+G PV +
Sbjct: 277 CLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDIT---- 332
Query: 333 QKVVQISCGWRHTIAVTERA--NVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
+ + I+ G H++A+ R N+ SWG + QLG+G N P+ +E
Sbjct: 333 ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKP--ENLPREVEGF 382
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 176/398 (44%), Gaps = 76/398 (19%)
Query: 10 EATAVSP-PRRVLLISAGASHSVALLSGNAVCSWGRGEDGQLGH---GDTDDRLLPTLLS 65
E T VS P + ISAG HS+A+ S + +WGR ++GQLG D R P +
Sbjct: 73 EPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVE 132
Query: 66 ALD--------AQQVVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNS-SDLFIPQP 116
L+ A VVS A G D ++ + WG G+LG GN + +P
Sbjct: 133 GLENVNVQAAFASGVVSAAIGDDGSL---------WVWGRSKRGQLGLGNGIIEARVPSR 183
Query: 117 IRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLG-------------------- 156
+ L + ++S G H LA+T++G+V WG +G++G
Sbjct: 184 VENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMK 243
Query: 157 ---------LGTADDSLV--------------PQKIQTFQGVPIKMVAAGAEHSVAITEN 193
L A+ +V P ++ + +A G++HS+ + +
Sbjct: 244 GHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHD 303
Query: 194 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSG--GLF 251
G L G YG LG ++ P ++ + I +A G H++++ + G +
Sbjct: 304 GTLLSAGSNIYGQLGRSKQDLGMKPVDIT------ESPISIAAGLGHSLAICNRGERNIL 357
Query: 252 TYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFG 311
++GW++ QLG G E+ +P ++E + VS G HS+ +T G+ + WG K G
Sbjct: 358 SWGWNRSRQLGRGKPEN--LPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNG 415
Query: 312 QVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVT 349
++G+G + D P+ ++ + V+Q G+ H++ +
Sbjct: 416 RLGLGSSSDEPEPMLLE-DVEGCVLQAVAGFDHSLILV 452
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 56/303 (18%)
Query: 42 WGRGEDGQLGHGD-TDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGWGDF 100
WGR + GQLG G+ + +P+ + L A+ VV V+ G H +A + +V+ WG+
Sbjct: 161 WGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDG-KVFGWGYVAD 219
Query: 101 GRLG---------------------HGNSSDLFI----------------------PQPI 117
GR+G H + DL + P +
Sbjct: 220 GRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLV 279
Query: 118 RALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPI 177
++ I+CG H L + +G + S G N GQLG D + P I PI
Sbjct: 280 EETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES---PI 336
Query: 178 KMVAAGAEHSVAITENGE--LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVA 235
+AAG HS+AI GE + WGW R LG G + +P +V D + V+
Sbjct: 337 S-IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGFDGESPAS--VS 391
Query: 236 CGWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMA 295
G H++ V+ G + +G K G+LG G D P LE + + + Q G+ HS+
Sbjct: 392 AGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDV-EGCVLQAVAGFDHSLI 450
Query: 296 LTS 298
L +
Sbjct: 451 LVA 453
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 23 ISAGASHSVALLS--GNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGAD 80
I+AG HS+A+ + + SWG QLG G ++ LP + D + SV+ G
Sbjct: 338 IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGFDGESPASVSAGRV 395
Query: 81 HTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTM 140
H++ ++ + E + WG G GRLG G+SSD P + ++G ++ ++ G H L +
Sbjct: 396 HSLCVTE-KGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLILVA 453
Query: 141 E 141
E
Sbjct: 454 E 454
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 237 GWRHTISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMAL 296
G R T+ G L G S G G D P + L I +S G HS+A+
Sbjct: 41 GERRTVMSFGDGNLGALGLSSSSIPGMG--MDAYEPTVVSNLPSD-ISSISAGHYHSLAV 97
Query: 297 TSCGQLYGWGWNKFGQVG--VGDNVD-RSAPVQVKFPHDQKVVQISCGWRHTIAVTERAN 353
TS G+++ WG N GQ+G V D+ D RS P +V+ + V + A+ + +
Sbjct: 98 TSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGS 157
Query: 354 VYSWGRGTNGQLGQGD-TVDRNSPKIIEALSVD 385
++ WGR GQLG G+ ++ P +E L+ +
Sbjct: 158 LWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE 190
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 96 GWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQL 155
G+G FG LGH + +P+ + +I I+ +H A+T GE+ WGR +
Sbjct: 8 GYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGR 67
Query: 156 GLGTADDSL-------VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 208
VP K++ VP+ V+ G ++A+T+ G+L+ WG LG
Sbjct: 68 LGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELG 126
Query: 209 LGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDLED 268
GD W P V S L+ ++ +ACG H+++++ G + ++G +GQLG L +
Sbjct: 127 RGDNLGGWEPMPVPS--LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRN 184
Query: 269 YLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGV-GDNVDRSAPVQV 327
VP ++EAL+DK I ++ G S A+T G+L+ WG K Q+GV G ++ PV+V
Sbjct: 185 QKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEV 244
Query: 328 KF--------PHDQKVVQISCGWRHTIAVTERA 352
F PH KV+ IS G H + + R+
Sbjct: 245 NFLTEEDECQPH--KVISISIGASHALCLVSRS 275
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGE-------DGQLGHGDTDDRLLPTLLSALDAQQ 71
++ I+ +H+ A+ + WGR E G + +P+ + AL
Sbjct: 36 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP- 94
Query: 72 VVSVACGADHTIAYSDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCG 131
V SV+CG T+A + ++++WG LG G++ + P P+ +L+G+RI QI+CG
Sbjct: 95 VASVSCGGFFTMALTKEG-QLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACG 153
Query: 132 DSHCLAVTMEGEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAIT 191
H LA+T EG+V SWG +GQLG + + VP +I+ I +A+G S AIT
Sbjct: 154 GYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAIT 213
Query: 192 ENGELYGWGWGRYGNLGL-GDRNDRWIPEKVSSV----DLQRDKMIMVACGWRHTISVSS 246
+ GEL+ WG + LG+ G + P +V+ + + Q K+I ++ G H + + S
Sbjct: 214 DGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 273
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 18/270 (6%)
Query: 43 GRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACGADHTIAYSDSRLEVYSWGW--GD- 99
G G G LGH L+P + ++ ++A HT A ++S E+Y WG GD
Sbjct: 8 GYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESG-ELYMWGREEGDG 66
Query: 100 ----FGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTMEGEVQSWGRNQNGQL 155
G L +P ++AL + + +SCG +A+T EG++ +WG N N +L
Sbjct: 67 RLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYEL 125
Query: 156 GLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDR 215
G G P + + +GV I +A G HS+A+TE G++ WG G +G LG ++
Sbjct: 126 GRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQ 185
Query: 216 WIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGDL-EDYLVPHK 274
+P ++ + L K++ +A G + +++ G L+ +G +K QLG L E P +
Sbjct: 186 KVPTEIEA--LADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVE 243
Query: 275 LEALSDKLICQ------VSGGWRHSMALTS 298
+ L+++ CQ +S G H++ L S
Sbjct: 244 VNFLTEEDECQPHKVISISIGASHALCLVS 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 153 GQLGLGTADDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWG-------WGRYG 205
G LG LVP+++ I +A H+ AITE+GELY WG G
Sbjct: 13 GALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 72
Query: 206 NLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSKYGQLGHGD 265
G + +P KV ++ + + V+CG T++++ G L+ +G + +LG GD
Sbjct: 73 GRGPNEGGGLSVPSKVKALTV---PVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGD 129
Query: 266 LEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPV 325
P + +L I Q++ G HS+ALT G++ WG GQ+G ++ P
Sbjct: 130 NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPT 189
Query: 326 QVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLG-QGDTVDRNSPKIIEALSV 384
+++ D+K+V I+ G + A+T+ ++ WG + QLG G + +P + L+
Sbjct: 190 EIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTE 249
Query: 385 DGSCGQH 391
+ C H
Sbjct: 250 EDECQPH 256
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 10/191 (5%)
Query: 200 GWGRYGNLGLGDRNDRWIPEKVSSVDLQRDKMIMVACGWRHTISVSSSGGLFTYGWSK-- 257
G+G +G LG +P +V D K+ +A HT +++ SG L+ +G +
Sbjct: 8 GYGGFGALGHKVYTRELVPRRVD--DSWDCKISAIATSGTHTAAITESGELYMWGREEGD 65
Query: 258 -----YGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNKFGQ 312
G + VP K++AL+ + VS G +MALT GQL+ WG N +
Sbjct: 66 GRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYE 124
Query: 313 VGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVD 372
+G GDN+ P+ V ++ QI+CG H++A+TE V SWG G +GQLG +
Sbjct: 125 LGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRN 184
Query: 373 RNSPKIIEALS 383
+ P IEAL+
Sbjct: 185 QKVPTEIEALA 195
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 250 LFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALTSCGQLYGWGWNK 309
L G+ +G LGH LVP +++ D I ++ H+ A+T G+LY WG +
Sbjct: 4 LVVRGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE 63
Query: 310 -------FGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTERANVYSWGRGTN 362
G + S P +VK V +SCG T+A+T+ +++WG +N
Sbjct: 64 GDGRLGLGPGRGPNEGGGLSVPSKVK-ALTVPVASVSCGGFFTMALTKEGQLWNWGANSN 122
Query: 363 GQLGQGDTVDRNSPKIIEAL 382
+LG+GD + P + +L
Sbjct: 123 YELGRGDNLGGWEPMPVPSL 142
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 153/322 (47%), Gaps = 36/322 (11%)
Query: 19 RVLLISAGASHSVALLSGNAVCSWGRGEDGQLGHGDTDDRLLPTLLSALDAQQVVSVACG 78
R L IS G H+ A+ S ++ +WG E GQLG G R P + L ++ V V+CG
Sbjct: 62 RWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCG 121
Query: 79 ADHTIAYSDSRLE------VYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGD 132
A T A ++ R W WG G++ A IR Q+SCG
Sbjct: 122 AFCTAAIAEPRENDGTLSTSRLWVWGQ----NQGSNLPRLFSGAFPATTAIR--QVSCGT 175
Query: 133 SHCLAVTMEGEVQSWGRNQNGQLGLGTADDSL-VPQKIQTF--------QGVPIKMVAAG 183
+H +A++ EG +Q+WG N+ GQLG G + L P+ I + + V I ++ G
Sbjct: 176 AHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCG 235
Query: 184 AEHSVAITENGELYGWGWGRYGNLG---LGDRNDRWIPEKVSSVDLQRDKMIMVACGWRH 240
H+ A+++ GE+Y WG G G LG L + IP +V V L M VACG H
Sbjct: 236 EYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRV--VGLDGVSMKEVACGGVH 293
Query: 241 TISVSSSGGLFTYGWSKYGQLGHGDLEDYL--VPHKLEALSDKL--------ICQVSGGW 290
T ++S G L+ +G + GQLG G + V + E L + + V+ G
Sbjct: 294 TCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGH 353
Query: 291 RHSMALTSCGQLYGWGWNKFGQ 312
H++ G++ GWG+N +GQ
Sbjct: 354 SHTLVYMREGRICGWGYNSYGQ 375
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 172/382 (45%), Gaps = 66/382 (17%)
Query: 30 SVALLSGNAVCSWGRGEDGQLGHGDTDDRL-----LPTLLSALDA---QQVVSVACGADH 81
SV++ + +A+ WG + GQ G + + L LP L A + + ++CG +H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 82 TIAY-SDSRLEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGIRIKQISCGDSHCLAVTM 140
T A SD L ++WG ++G+LG G P+ ++ LQ +K +SCG + C A
Sbjct: 73 TAAVASDGSL--FAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCG-AFCTAAIA 129
Query: 141 E----------GEVQSWGRNQNGQLGLGTADDSLVPQKIQTFQG-----VPIKMVAAGAE 185
E + WG+NQ L + F G I+ V+ G
Sbjct: 130 EPRENDGTLSTSRLWVWGQNQGSNLP-------------RLFSGAFPATTAIRQVSCGTA 176
Query: 186 HSVAITENGELYGWGWGRYGNLGLGDRND-----RWIPEKVSSVDLQRD--KMIMVACGW 238
H VA++E G L WG+ G LG G + R I +D + K++ ++CG
Sbjct: 177 HVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGE 236
Query: 239 RHTISVSSSGGLFTYGWSKYGQLGHGDLE---DYLVPHKLEALSDKLICQVSGGWRHSMA 295
HT ++S +G ++T+G GQLGH L+ L+P ++ L + +V+ G H+ A
Sbjct: 237 YHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCA 296
Query: 296 LTSCGQLYGWGWNK------------FGQVGVG-DNVDRSAPVQVKFPHDQKVVQISCGW 342
L+ G LY WG + F V G + + R+ PV V P D ++V +CG
Sbjct: 297 LSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLV-IPTDVRLV--ACGH 353
Query: 343 RHTIAVTERANVYSWGRGTNGQ 364
HT+ + WG + GQ
Sbjct: 354 SHTLVYMREGRICGWGYNSYGQ 375
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 187 SVAITENGELYGWGWGRYGNLGLGDRND------RWIPEKVSSVDLQRDKMIMVACGWRH 240
SV+I +Y WG+ + G G ++ + PE + + ++CG H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 241 TISVSSSGGLFTYGWSKYGQLGHGDLEDYLVPHKLEALSDKLICQVSGGWRHSMALT--- 297
T +V+S G LF +G ++YGQLG G P K++ L + + VS G + A+
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPR 132
Query: 298 ------SCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHDQKVVQISCGWRHTIAVTER 351
S +L+ WG N+ G N+ R FP + Q+SCG H +A++E
Sbjct: 133 ENDGTLSTSRLWVWGQNQ------GSNLPRL--FSGAFPATTAIRQVSCGTAHVVALSEE 184
Query: 352 ANVYSWGRGTNGQLGQGDTVD-RNSPKIIEALS 383
+ +WG GQLG+G T + +P++I A +
Sbjct: 185 GLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYA 217
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 283 ICQVSGGWRHSMALTSCGQLYGWGWNKFGQVGVGDNVDRSAPVQVKFPHD---------Q 333
I ++ G S+++ + +Y WG+N+ GQ G + ++ + + P +
Sbjct: 3 IGEIIGEVAPSVSIPTKSAIYVWGYNQSGQTGRNEQ-EKLLRIPKQLPPELFGCPAGANS 61
Query: 334 KVVQISCGWRHTIAVTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 382
+ + ISCG HT AV ++++WG GQLG G V R PK ++ L
Sbjct: 62 RWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQL 110