Miyakogusa Predicted Gene

Lj0g3v0338569.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LSZ2_SOYBN 1305 80.4 86.6 (tr|I1LSZ2) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=2
TAIR_pep AT3G20630.1 1140 70.3 82.3 | Symbols: UBP14, TTN6, ATUBP14, PER1 | ubiquitin-specific protease 14 | chr3:7203001-7208340 REVERSE LENGTH=797
Medicago Medtr2g081180.1 1228 74.7 84.5 | ubiquitin carboxyl-terminal hydrolase | HC | chr2:34056025-34046800 | 20130731
Soybean Glyma12g22240.1 1270 78.8 84.8  
LJGI gnl|LJGI|TC67025 1540 99.9 99.9 similar to UniRef100_A7P1D3 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0338569.1 length: 777 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00627 UBA 7.1e-08 624-660
684-719
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.8e-38 311-775
ProfileScan PS50235 UCH_2_3 19.997 313-777
IPR001607 Zinc finger, UBP-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF02148 zf-UBP 1e-16 185-258
HMMSmart SM00290 Ubiquitin 2e-21 184-239
ProfileScan PS50271 ZF_UBP 16.896 183-257
IPR009060 UBA-like
Molecular Function GO:0005515 protein binding    
superfamily SSF46934 UBA-like 2.8e-10 674-724
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9e-17 179-278
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
HMMSmart SM00165 Ubiquitin 3.8e-10 624-662
684-721
ProfileScan PS50030 UBA 14.017 622-663
682-722
IPR016652 Ubiquitinyl hydrolase
Molecular Function GO:0008242 omega peptidase activity    
HMMPIR PIRSF016308 Ubiquitin-specific 0 6-777
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 314-329
PatternScan PS00973 UCH_2_2 NA 753-771
no_ID  
Gene3D G3DSA:1.10.8.10 no description 4.5e-25 616-650
654-724
HMMPanther PTHR24006 FAMILY 0 1-776
HMMPanther PTHR24006:SF149SUBFAMILY NOT 0 1-776
Seg seg seg NA 499-513
542-557
582-593
724-740
superfamily SSF54001 Cysteine 6.3e-64 307-777
Wolf-PSORT
Lj0g3v0338569.1	cyto 4, pero 4, cyto_pero 4, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0338569.1