Miyakogusa Predicted Gene

Lj0g3v0338569.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0338569.1 tr|I1LSZ2|I1LSZ2_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.16950 PE=3
SV=1,84.92,0,Cysteine proteinases,NULL; UBA-like,UBA-like;
UBA,Ubiquitin-associated/translation elongation factor,CUFF.23161.1
         (777 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20630.1 | Symbols: UBP14, TTN6, ATUBP14, PER1 | ubiquitin-sp...  1140   0.0  

>AT3G20630.1 | Symbols: UBP14, TTN6, ATUBP14, PER1 |
           ubiquitin-specific protease 14 | chr3:7203001-7208340
           REVERSE LENGTH=797
          Length = 797

 Score = 1140 bits (2949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/774 (70%), Positives = 637/774 (82%), Gaps = 11/774 (1%)

Query: 6   LDLLRSNLSRVRIPEPTNRIFKHECCVSFDTPKSEGGLFVDMSTFLAFGKEFVAWNYEKT 65
           ++LLRSNLSRV+IPEPT+RI+KHECC+SFDTP+SEGGLFVDM++FLAFGK++V+WNYEKT
Sbjct: 1   MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60

Query: 66  GNPVYLHIKQTKKTDPEDRPTKKPTLLAIGVEGGFDNNEVEYEETHSVVILPDYVSLPFP 125
           GNPVYLHIKQT+K+ PEDRP KKPTLLAIGV+GGFDNNE EYEE++S+VILPD+VSLPFP
Sbjct: 61  GNPVYLHIKQTRKSIPEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSIVILPDFVSLPFP 120

Query: 126 SVELPEKVRLAVDAILLADGAERKDQLAAWTADTKKVSAYAMNLQQIDNGVVIPPSGWKC 185
           SVELPEKVR+AVD ++ A GAERK+Q+AAWTA+ K +S +A+ LQQI +G+VIPPSGWKC
Sbjct: 121 SVELPEKVRIAVDTVVNAVGAERKEQVAAWTAEKKLISEHALTLQQIKSGIVIPPSGWKC 180

Query: 186 AKCDKKDNLWLNLTDGMMLCGRKNWDGTGGNNHAIQHYEQTGYPLAVKLGTITADLEAAD 245
           +KCDK +NLWLNLTDGM+LCGRKNWDGTGGNNHA++HY++T YPLAVKLGTITADLEAAD
Sbjct: 181 SKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETAYPLAVKLGTITADLEAAD 240

Query: 246 VFSYPEDDSVLDPLLAQHLAFFGIDFSSLQKTEMTTAERELDRNTNFDWNRIQESGQDVD 305
           V+SYPEDDSVLDPLLA+HLA FGIDFSS+QKTEMTTAERELD+NTNFDWNRIQESG+++ 
Sbjct: 241 VYSYPEDDSVLDPLLAEHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKELV 300

Query: 306 PIFGPGYTGLVNIGNSCYMAATMQVVFSTRSFIQRYYSNQSLKKAFDVSPADPTVDLHMQ 365
           P+FGPGYTGLVN+GNSCY+AATMQ+VFST SFI RY+S+QSLK AF+++PADPT+DL+MQ
Sbjct: 301 PVFGPGYTGLVNLGNSCYLAATMQIVFSTHSFISRYFSHQSLKMAFEMAPADPTLDLNMQ 360

Query: 366 LTKLAHGLLSGKYSVPAFENDDKENVATSTTTAKQQGIHPHMFKSVIAASHPEFSSVRQQ 425
           LTKL HGLLSGKYS+PA + D       +T   +Q+GI P MFK+VIAASH EFSS+RQQ
Sbjct: 361 LTKLGHGLLSGKYSMPATQKD------ATTGDPRQEGIPPRMFKNVIAASHAEFSSMRQQ 414

Query: 426 DALEFFLHFIDQVERANAGKTELDPARSFKFGIEDKILCSSGKVAYNKRNDYILSLNIPL 485
           DAL+FFLH + +VERA+    +LDP+RSFKFGIE+KILC SGKV YNKR D ILSLNIPL
Sbjct: 415 DALDFFLHLVGKVERASNTTPDLDPSRSFKFGIEEKILCPSGKVGYNKREDCILSLNIPL 474

Query: 486 LEATNKEELASF-QXXXXXXXXXXXXXXXDEIVRPRVPLEACLANFSAPEEIHDFYSXXX 544
            EATNK+EL +F +               DEIVRPRVPLEACLANF++ E I D+YS   
Sbjct: 475 HEATNKDELEAFHKQKAGKGLEENDMRSSDEIVRPRVPLEACLANFASSEPIEDYYSSAL 534

Query: 545 XXXXXXXXXXXXXSFPDYLVLHMRRFVMEVGWVPKKLXXXXXXXXXXXXSHMRSIGHQTG 604
                        SFPDYLVLHMR+FVME GWVPKKL            SHMRS G Q G
Sbjct: 535 KGMTTAIKTTGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDISHMRSKGLQPG 594

Query: 605 EELLPDGAPDE-EDSNKLVANEEIVSQLVSMGFNHLHCQKAAINTSNVGVEEAMNWLLSH 663
           EELLPDG P+E  +S + VANEEIV+QLVSMGF+ LHCQKAAINTSN GVEEAMNWLLSH
Sbjct: 595 EELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSH 654

Query: 664 MDDPDIDNPIAESSETLTNVDQSKVDTLISFGFQEEIARKALKASGGDIEKATDWIFTSP 723
           MDDPDID PI+  +   +++DQS VDTL+SFGF E++ARKALKASGGDIEKATDW+F +P
Sbjct: 655 MDDPDIDAPISHQT---SDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNP 711

Query: 724 XXXXXXXXXXXXXXXXXHNDVSLPDGGGKYRLMGVVSHSGTSVHCGHYVAHILK 777
                                 LPDGGGKY+L G+VSH GTSVHCGHYVAHILK
Sbjct: 712 NASVSDMDVSSSNSAQTPAQSGLPDGGGKYKLFGIVSHMGTSVHCGHYVAHILK 765