Miyakogusa Predicted Gene
- Lj0g3v0338569.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0338569.1 tr|I1LSZ2|I1LSZ2_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.16950 PE=3
SV=1,84.92,0,Cysteine proteinases,NULL; UBA-like,UBA-like;
UBA,Ubiquitin-associated/translation elongation factor,CUFF.23161.1
(2331 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67025 similar to UniRef100_A7P1D3 Cluster: Ubiquitin ... 1540 0.0
gnl|LJGI|TC66977 similar to UniRef100_A7P1D3 Cluster: Ubiquitin ... 1253 0.0
gnl|LJGI|CB829126 similar to UniRef100_A7P1D3 Cluster: Ubiquitin... 406 e-112
>gnl|LJGI|TC67025 similar to UniRef100_A7P1D3 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (33%)
Length = 1148
Score = 1540 bits (777), Expect = 0.0
Identities = 784/785 (99%), Gaps = 1/785 (0%)
Strand = Plus / Plus
Query: 1547 ttgtgcgtccaagggtgcctttagaagcttgccttgcaaacttctctgctcctgaggaga 1606
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtgcgtcca-gggtgcctttagaagcttgccttgcaaacttctctgctcctgaggaga 59
Query: 1607 tacatgatttttacagcactgctctgaaaacaaagacgacagcactgaagactgcaggtc 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tacatgatttttacagcactgctctgaaaacaaagacgacagcactgaagactgcaggtc 119
Query: 1667 tgacttcatttcctgattacctggtgttacatatgcggagatttgttatggaggtaggat 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgacttcatttcctgattacctggtgttacatatgcggagatttgttatggaggtaggat 179
Query: 1727 gggtacccaaaaagctagatgtatacattgatgttcctgatatcatagatatcagtcata 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gggtacccaaaaagctagatgtatacattgatgttcctgatatcatagatatcagtcata 239
Query: 1787 tgcggagcataggtcatcagactggggaagagctgttacctgatggagcacctgatgagg 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgcggagcataggtcatcagactggggaagagctgttacctgatggagcacctgatgagg 299
Query: 1847 aagattcaaacaaacttgtggccaatgaagaaattgtctcgcagcttgtttccatgggct 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagattcaaacaaacttgtggccaatgaagaaattgtctcgcagcttgtttccatgggct 359
Query: 1907 ttaatcatctacattgtcagaaagctgctataaatacatcaaatgttggagtggaagaag 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttaatcatctacattgtcagaaagctgctataaatacatcaaatgttggagtggaagaag 419
Query: 1967 caatgaattggttactatctcacatggatgatccagatattgacaatccgattgccgaaa 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caatgaattggttactatctcacatggatgatccagatattgacaatccgattgccgaaa 479
Query: 2027 gttcggaaactttgacaaatgttgaccaatcaaaagttgatactctaatttcgtttggat 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gttcggaaactttgacaaatgttgaccaatcaaaagttgatactctaatttcgtttggat 539
Query: 2087 ttcaagaagagattgctagaaaggcactgaaggcatcgggtggtgatattgagaaagcaa 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttcaagaagagattgctagaaaggcactgaaggcatcgggtggtgatattgagaaagcaa 599
Query: 2147 cagattggatatttaccagtcctgacgcgtcagtctccagtatggatgctacctcatcag 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cagattggatatttaccagtcctgacgcgtcagtctccagtatggatgctacctcatcag 659
Query: 2207 atgctacctcaactcacaatgatgtcagtctgcctgatggaggagggaaatatcgcctta 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atgctacctcaactcacaatgatgtcagtctgcctgatggaggagggaaatatcgcctta 719
Query: 2267 tgggagttgttagccacagtggaacctcagtgcattgtggtcactatgttgctcacattt 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tgggagttgttagccacagtggaacctcagtgcattgtggtcactatgttgctcacattt 779
Query: 2327 taaaa 2331
|||||
Sbjct: 780 taaaa 784
>gnl|LJGI|TC66977 similar to UniRef100_A7P1D3 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (25%)
Length = 729
Score = 1253 bits (632), Expect = 0.0
Identities = 639/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Plus
Query: 1 atgataaccgaacccttggatctgcttcgctccaatctctcccgcgttcggatccccgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atgataaccgaacccttggatctgcttcgctccaatctctcccgcgttcggatccccgaa 150
Query: 61 cccaccaatcgcatcttcaagcacgaatgctgcgtttctttcgacactccgaagtcggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cccaccaatcgcatcttcaagcacgaatgctgcgtttctttcgacactccgaagtcggaa 210
Query: 121 ggtggtttgttcgtcgacatgtccacatttcttgctttcgggaaagagtttgtcgcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggtggtttgttcgtcgacatgtccacatttcttgctttcgggaaagagtttgtcgcttgg 270
Query: 181 aattatgagaagactggaaatcctgtctatttgcatataaagcagacaaagaagacagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aattatgagaagactggaaatcctgtctatttgcatataaagcagacaaagaagacagat 330
Query: 241 cccgaagataggcctacgaagaaaccaactctcttggctataggtgttgaaggtggattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cccgaagataggcctacgaagaaaccaactctcttggctataggtgttgaaggtggattt 390
Query: 301 gataacaatgaagttgagtacgaggagactcatagtgtagttatattacctgactatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gataacaatgaagttgagtacgaggagactcatagtgtagttatattacctgactatgta 450
Query: 361 tctcttccgttcccttctgtggaattgccagagaaggtaaggttggcagttgatgcaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tctcttccgttcccttctgtggaattgccagagaaggtaaggttggcagttgatgcaatc 510
Query: 421 ttactagctgatggggctgaacggaaggatcaacttgcagcttggactgctgatacgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttactagctgatggggctgaacggaaggatcaacttgcagcttggactgctgatacgaaa 570
Query: 481 aaagttagtgcctatgcgatgaatttacaacagattgacaatggcgtggttattccgcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaagttagtgcctatgcgatgaatttacaacagattgacaatggcgtggttattccgcca 630
Query: 541 tctgggtggaaatgtgccaagtgtgataagaaggacaatctttggctgaatttaactgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tctgggtggaaatgtgccaagtgtgataagaaggacaatctttggctgaatttaactgat 690
Query: 601 ggaatgatgctctgtgggaggaaaaactgggatggaactg 640
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 691 ggaatgatgctctgtgggaggaaaaactggg-tggaactg 729
>gnl|LJGI|CB829126 similar to UniRef100_A7P1D3 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (13%)
Length = 460
Score = 406 bits (205), Expect = e-112
Identities = 302/334 (90%), Gaps = 9/334 (2%)
Strand = Plus / Plus
Query: 1878 aattgtctcgcagcttgtttccatgggctttaatcatctacattgtcagaaagctgctat 1937
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 129 aattgtctcacagcttgtttccatgggctttaatcatctccattgtcagaaagctgctat 188
Query: 1938 aaatacatcaaatgttggagtggaagaagcaatgaattggttactatctcacatggatga 1997
||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||
Sbjct: 189 aaatacatcaaatgttggagtcggagaggcaatgaattggttactgtctcacatggatga 248
Query: 1998 tccagatattgacaatccgattgccgaaagt------tcggaaactttgacaaatgttga 2051
|||||||||||||| ||| ||| ||||| || ||||||||||||||||||||
Sbjct: 249 tccagatattgacactcctatttttgaaagccatggctctgaaactttgacaaatgttga 308
Query: 2052 ccaatcaaaagttgatactctaatttcgtttggatttcaagaagagattgctagaaaggc 2111
|||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 309 ccaatcaaaagttgattctctaatttcatttggatttcaagaagagatttctagaaaggc 368
Query: 2112 actgaaggcatcgggtggtgatattgagaaagcaacagattggatatttaccagtcctga 2171
||||||||||||||||||||| ||||| ||||||||| |||||||||| | || ||||||
Sbjct: 369 actgaaggcatcgggtggtgacattgacaaagcaacatattggatattgagcaatcctga 428
Query: 2172 cgcgtcagtctccagtatggatgctacctcatca 2205
| |||||||||||||||||||||||||||||
Sbjct: 429 tg---cagtctccagtatggatgctacctcatca 459