Miyakogusa Predicted Gene

Lj0g3v0332239.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JA63_MEDTR 461 87.0 94.7 (tr|G7JA63) TBC1 domain family member OS=Medicago truncatula GN=MTR_3g083840 PE=4 SV=1
TAIR_pep AT4G13730.2 393 72.5 87.0 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7973901 FORWARD LENGTH=408
Medicago Medtr3g083840.1 461 87.0 94.7 | RabGAP/TBC domain protein | HC | chr3:37824348-37830080 | 20130731
Soybean Glyma05g28660.1 424 79.8 89.7  
LJGI gnl|LJGI|TC58759 551 84.4 84.4 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332239.2 length: 262 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 1.2e-29 110-253
HMMSmart SM00164 Domain 4.9e-20 8-262
ProfileScan PS50086 TBC_RABGAP 24.659 13-262
superfamily SSF47923 Ypt/Rab-GAP 6e-47 1-240
no_ID  
Gene3D G3DSA:1.10.8.270 no description 2.4e-27 101-201
HMMPanther PTHR22957 TBC1 4.4e-117 1-247
HMMPanther PTHR22957:SF27 TBC1 4.4e-117 1-247
Wolf-PSORT
Lj0g3v0332239.2	cyto_nucl 6.5, nucl 5.5, cyto 4.5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332239.2