Miyakogusa Predicted Gene
- Lj0g3v0332239.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0332239.2 tr|G7JA63|G7JA63_MEDTR TBC1 domain family member
OS=Medicago truncatula GN=MTR_3g083840 PE=4 SV=1,87.04,0,Ypt/Rab-GAP
domain of gyp1p,Rab-GTPase-TBC domain; TBC_RABGAP,Rab-GTPase-TBC
domain; no description,,CUFF.22646.2
(262 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g083840.1 | RabGAP/TBC domain protein | HC | chr3:37824348... 461 e-130
Medtr8g085300.1 | RabGAP/TBC domain protein | HC | chr8:35334451... 393 e-110
Medtr4g114580.1 | RabGAP/TBC domain protein | HC | chr4:47118501... 271 4e-73
Medtr2g099380.1 | RabGAP/TBC domain protein | HC | chr2:42598039... 82 8e-16
Medtr4g068180.1 | RabGAP/TBC domain protein | HC | chr4:25557345... 80 2e-15
Medtr2g099380.2 | RabGAP/TBC domain protein | HC | chr2:42598043... 78 1e-14
Medtr1g069705.2 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 75 6e-14
Medtr1g069705.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 75 6e-14
Medtr4g127450.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 70 2e-12
Medtr4g115090.1 | RabGAP/TBC domain protein | HC | chr4:47487726... 66 3e-11
Medtr4g081110.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 64 1e-10
Medtr3g092100.1 | Rab GTPase activator | HC | chr3:42056500-4205... 57 1e-08
Medtr2g083220.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 56 4e-08
Medtr2g037930.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 55 6e-08
Medtr2g099185.2 | Rab GTPase activator | HC | chr2:42550462-4254... 54 1e-07
Medtr2g099185.3 | Rab GTPase activator | HC | chr2:42550766-4254... 54 1e-07
Medtr2g099185.1 | Rab GTPase activator | HC | chr2:42550462-4254... 54 1e-07
Medtr1g007590.1 | Rab GTPase activator | HC | chr1:448550-444327... 52 5e-07
Medtr1g007590.2 | Rab GTPase activator | HC | chr1:448550-444409... 52 6e-07
>Medtr3g083840.1 | RabGAP/TBC domain protein | HC |
chr3:37824348-37830080 | 20130731
Length = 432
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/247 (87%), Positives = 234/247 (94%)
Query: 1 MRELRRLASQGIPDASGLRSTVWKLLLGYLPQDRALWSSELAKKRSQYKHFKDDLLMNPS 60
MRELR++ASQGIPD+ GLRST+WKLLLGYLP DR+LWSSELAKKRSQYK FK D+L+NPS
Sbjct: 95 MRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQYKRFKQDILINPS 154
Query: 61 EITRRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDR 120
EITRRM +SA+YD DD K +RGMLSRSQ+T GEHPLSLGKTSIWNQFFQD+DIIEQIDR
Sbjct: 155 EITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQIDR 214
Query: 121 DVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKND 180
DVKRTHPD+HFFCGDSQ AKSNQE+LKNILIIFAKLNPGIRYVQGMNE+LAPLFYV KND
Sbjct: 215 DVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKND 274
Query: 181 PEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRH 240
P+EE+AAF+EADTFFCFVELLSG RDNFCQQLDNS+VGIRSTITRLSQLLKEHDEELWRH
Sbjct: 275 PDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRH 334
Query: 241 LEVTTKV 247
LEVTTKV
Sbjct: 335 LEVTTKV 341
>Medtr8g085300.1 | RabGAP/TBC domain protein | HC |
chr8:35334451-35330009 | 20130731
Length = 443
Score = 393 bits (1010), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/247 (78%), Positives = 227/247 (91%)
Query: 1 MRELRRLASQGIPDASGLRSTVWKLLLGYLPQDRALWSSELAKKRSQYKHFKDDLLMNPS 60
+RELRR++ QG+PD++G+RST+WKLLLGYLP DRALWSSELAKKRSQYK FK+++LMNPS
Sbjct: 106 LRELRRISCQGVPDSAGIRSTLWKLLLGYLPPDRALWSSELAKKRSQYKQFKEEILMNPS 165
Query: 61 EITRRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDR 120
EITRRM +S D DD+ R +LSRS++ EHPLSLGKTS+WNQFFQD++II+QIDR
Sbjct: 166 EITRRMYNSTIGDADDAAKRDRALLSRSEIPHDEHPLSLGKTSVWNQFFQDTEIIDQIDR 225
Query: 121 DVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKND 180
DVKRTHPD+HFF GDS+FAKSNQE+LKNILIIFAKLNPG++YVQGMNE+LAPLFYV KND
Sbjct: 226 DVKRTHPDMHFFSGDSKFAKSNQEALKNILIIFAKLNPGVKYVQGMNELLAPLFYVFKND 285
Query: 181 PEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRH 240
P+EE+AAFAEAD FFCFVELLSGLRDNF QQLDNSVVGIRSTIT+LSQLL++HDEELWRH
Sbjct: 286 PDEENAAFAEADAFFCFVELLSGLRDNFVQQLDNSVVGIRSTITKLSQLLRKHDEELWRH 345
Query: 241 LEVTTKV 247
LE+T+K+
Sbjct: 346 LEITSKI 352
>Medtr4g114580.1 | RabGAP/TBC domain protein | HC |
chr4:47118501-47122390 | 20130731
Length = 467
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 181/257 (70%), Gaps = 10/257 (3%)
Query: 1 MRELRRLASQGIPDASGLRSTVWKLLLGYLPQDRALWSSELAKKRSQYKHFKDDLLMNPS 60
+ +LRR+AS GIPD GLR+T WKLLLGYLP LW ++L R +Y + K +LL NPS
Sbjct: 123 LEKLRRIASTGIPDGGGLRATAWKLLLGYLPLCHELWETQLKDNRLKYVNMKKELLSNPS 182
Query: 61 EIT----RRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIE 116
E + + S+ +D + G L R ++ +HPLSL K S+W Q+FQ ++I E
Sbjct: 183 EHIWKEPKHLSSTKRHDNN----AIDGPLRRHEIPVEDHPLSLDKESLWRQYFQHTEIAE 238
Query: 117 QIDRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYV 176
QIDRD++RTHPD+ FF ++ F++ N+E++KNIL++FAKLNP I YVQGMNE+LAP++YV
Sbjct: 239 QIDRDLQRTHPDMPFFSAETSFSRKNREAMKNILLLFAKLNPAICYVQGMNEVLAPIYYV 298
Query: 177 LKNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEE 236
D + ++AA AEAD+F CFV +L D+FCQQLDNS GI +T++RLS LLK +DE+
Sbjct: 299 FSADNDNQNAANAEADSFSCFVRILGDSVDHFCQQLDNSSSGILATLSRLSDLLKVNDEQ 358
Query: 237 LWRHLEVTTKVRSIPSF 253
LW HLE TTKV+ P F
Sbjct: 359 LWHHLEFTTKVK--PQF 373
>Medtr2g099380.1 | RabGAP/TBC domain protein | HC |
chr2:42598039-42603808 | 20130731
Length = 448
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 68/255 (26%)
Query: 1 MRELRRLASQGIPDASGLRSTVWKLLLGYLPQDRALWSSELAKKRSQYKHFKDDLLMNPS 60
+ +LR LA G+PD +R TVW+LLLGY P + L +KR +Y
Sbjct: 141 LDKLRELAWSGVPDY--MRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLD---------- 188
Query: 61 EITRRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDR 120
C S YD D++ RS + ++ QI
Sbjct: 189 ------CVSQYYDIPDTE--------RSD--------------------DEISMLRQIAV 214
Query: 121 DVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVL--- 177
D RT PD+ FF Q+SL+ IL +A +P YVQG+N+++ P F V
Sbjct: 215 DCPRTVPDVAFFQ-----QPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSE 269
Query: 178 ----------KNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLS 227
+D + + EAD ++C +LL G++D++ + GI+ + +L
Sbjct: 270 YLEGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYT----FAQPGIQRLVFKLK 325
Query: 228 QLLKEHDEELWRHLE 242
+L++ D+ + H+E
Sbjct: 326 ELVRRIDDPVSSHME 340
>Medtr4g068180.1 | RabGAP/TBC domain protein | HC |
chr4:25557345-25563029 | 20130731
Length = 455
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 68/252 (26%)
Query: 4 LRRLASQGIPDASGLRSTVWKLLLGYLPQDRALWSSELAKKRSQYKHFKDDLLMNPSEIT 63
LR LA G+PD +R VW+LLLGY P + L +KR +Y
Sbjct: 151 LRELAWSGVPDY--MRPKVWRLLLGYEPPNSDRKEGVLGRKRGEYLD------------- 195
Query: 64 RRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDRDVK 123
C S YD DS+ RS + +++ QI D
Sbjct: 196 ---CISQYYDIPDSE--------RSD--------------------DEVNMLRQIAVDCP 224
Query: 124 RTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVL------ 177
RT PD+ FF + Q+SL+ IL +A +P YVQG+N+++ P V
Sbjct: 225 RTVPDVTFFQ-----QQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFISEHLE 279
Query: 178 -------KNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLL 230
+D + + EAD ++C +LL G++D++ + GI+ + +L +L+
Sbjct: 280 GGIDDWSMSDLSSDKISNVEADCYWCLSKLLDGMQDHYT----FAQPGIQRLVFKLKELV 335
Query: 231 KEHDEELWRHLE 242
+ DE + +H+E
Sbjct: 336 RRIDEPISQHIE 347
>Medtr2g099380.2 | RabGAP/TBC domain protein | HC |
chr2:42598043-42602163 | 20130731
Length = 346
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 68/249 (27%)
Query: 3 ELRRLASQGIPDASGLRSTVWKLLLGYLPQDRALWSSELAKKRSQYKHFKDDLLMNPSEI 62
+LR LA G+PD +R TVW+LLLGY P + L +KR +Y
Sbjct: 143 KLRELAWSGVPDY--MRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLD------------ 188
Query: 63 TRRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDRDV 122
C S YD D++ + + +S+ + QI D
Sbjct: 189 ----CVSQYYDIPDTE-------------RSDDEISM---------------LRQIAVDC 216
Query: 123 KRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVL----- 177
RT PD+ FF Q+SL+ IL +A +P YVQG+N+++ P F V
Sbjct: 217 PRTVPDVAFFQ-----QPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYL 271
Query: 178 --------KNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQL 229
+D + + EAD ++C +LL G++D++ + GI+ + +L +L
Sbjct: 272 EGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYT----FAQPGIQRLVFKLKEL 327
Query: 230 LKEHDEELW 238
++ D L+
Sbjct: 328 VRRIDGNLF 336
>Medtr1g069705.2 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr1:30360034-30352916 | 20130731
Length = 424
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 41/244 (16%)
Query: 4 LRRLASQGIPDASGLRSTVWKLLLG-YLPQDRALWSSELA-KKRSQYKHFKDDLLMNPSE 61
LRR+ G+ ++ VW+ LLG Y P + +E+ ++R QY +K
Sbjct: 68 LRRIQRGGV--HPSIKGEVWEFLLGCYDPNSTSEERNEIKQRRRGQYDMWK--------- 116
Query: 62 ITRRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPL--SLGKTSIWNQ-FFQDSDIIEQI 118
A GS ++ V P+ SL K ++ Q ++ QI
Sbjct: 117 --------AECQKIVPVLGSGKFVTTPLVGDDGQPIDPSLVKIKTSDKKVVQWLQLLHQI 168
Query: 119 DRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVLK 178
DV RT + F+ ++NQ L ++L I+A L+ I YVQGMN+I +PL +++
Sbjct: 169 GLDVVRTDRALAFY-----EIEANQSKLWDVLSIYAWLDNDIGYVQGMNDICSPLVILIE 223
Query: 179 NDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEELW 238
N EAD F+CF + +R+NF ++ + +G+++ + LSQ++K D +L
Sbjct: 224 N----------EADCFWCFDRAMRRMRENF--RVTATSMGVQTQLGTLSQIMKTVDPKLH 271
Query: 239 RHLE 242
HLE
Sbjct: 272 HHLE 275
>Medtr1g069705.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr1:30360021-30352911 | 20130731
Length = 424
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 41/244 (16%)
Query: 4 LRRLASQGIPDASGLRSTVWKLLLG-YLPQDRALWSSELA-KKRSQYKHFKDDLLMNPSE 61
LRR+ G+ ++ VW+ LLG Y P + +E+ ++R QY +K
Sbjct: 68 LRRIQRGGV--HPSIKGEVWEFLLGCYDPNSTSEERNEIKQRRRGQYDMWK--------- 116
Query: 62 ITRRMCSSANYDTDDSKFGSRGMLSRSQVTQGEHPL--SLGKTSIWNQ-FFQDSDIIEQI 118
A GS ++ V P+ SL K ++ Q ++ QI
Sbjct: 117 --------AECQKIVPVLGSGKFVTTPLVGDDGQPIDPSLVKIKTSDKKVVQWLQLLHQI 168
Query: 119 DRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVLK 178
DV RT + F+ ++NQ L ++L I+A L+ I YVQGMN+I +PL +++
Sbjct: 169 GLDVVRTDRALAFY-----EIEANQSKLWDVLSIYAWLDNDIGYVQGMNDICSPLVILIE 223
Query: 179 NDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEELW 238
N EAD F+CF + +R+NF ++ + +G+++ + LSQ++K D +L
Sbjct: 224 N----------EADCFWCFDRAMRRMRENF--RVTATSMGVQTQLGTLSQIMKTVDPKLH 271
Query: 239 RHLE 242
HLE
Sbjct: 272 HHLE 275
>Medtr4g127450.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:52908354-52902885 | 20130731
Length = 836
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 18 LRSTVWKLLLGYLPQDRALWSSE-----LAKKRSQYKHFKDDLLMNPSEITRRMCSSANY 72
LR W++ LG LP + S + A R +Y + LL++P + + SS N
Sbjct: 38 LRGLQWRINLGVLPSSSSSTSVDDLRRATANSRRRYASLRGRLLVDP-HVPKDESSSPNL 96
Query: 73 DTDDSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDRDVKRTHPDIHFF 132
D+ PLS S W +FF ++++ +D+D+ R +P+
Sbjct: 97 VMDN-------------------PLSQNPNSTWGRFFHNAELERMVDQDLSRLYPE---- 133
Query: 133 CGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKNDPEEEHAAFAEAD 192
G+ K Q L+ IL+++ +P Y QGM+E+LAPL YVL+ D E AE
Sbjct: 134 HGNYFQTKGCQGILRRILLLWCLRHPDCGYRQGMHELLAPLLYVLQVDVER----LAEVR 189
Query: 193 TFF--CFVELLSGLRDNFCQQLD 213
+ F + GL FCQ+ D
Sbjct: 190 KLYEDHFTDRFDGL---FCQEND 209
>Medtr4g115090.1 | RabGAP/TBC domain protein | HC |
chr4:47487726-47477753 | 20130731
Length = 666
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 61/227 (26%)
Query: 18 LRSTVWKLLLGYLPQDRALWSSELAK--KRSQYKHFKDDLLMNPSEITRRMCSSANYDTD 75
LR+ VW LLLGY P D E K K+S+Y+ K+ S +R
Sbjct: 371 LRNEVWGLLLGYYPYDSTYAEREFLKSVKKSEYETIKNQWQSISSAQAKRF--------- 421
Query: 76 DSKFGSRGMLSRSQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDRDVKRTHPDIHFFCGD 135
+KF R L I++DV RT + F+ GD
Sbjct: 422 -TKFRERKGL--------------------------------IEKDVVRTDRSLTFYEGD 448
Query: 136 SQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKNDPEEEHAAFAEADTFF 195
N L++IL+ ++ N + Y QGM+++L+P+ +V+++ E++ F+
Sbjct: 449 DN---PNVNVLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMED----------ESEAFW 495
Query: 196 CFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRHLE 242
CFV L+ L NF + + G+ S + LS+L++ D L + +
Sbjct: 496 CFVSLMERLGPNFNRDQN----GMHSQLFALSKLVELLDSPLHNYFK 538
>Medtr4g081110.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:31396490-31401093 | 20130731
Length = 436
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 32/254 (12%)
Query: 2 RELRRLASQGIPDASGLRSTVWKLLLG-YLPQDR-ALWSSELAKKRSQYKHFKDD----- 54
R L R+ GI +R VW+ LLG Y P ++R+QY +K++
Sbjct: 54 RTLSRIHRGGI--HPSIRGEVWEFLLGCYEPTSTFEEREEIRQRRRTQYAEWKEECRQLF 111
Query: 55 -LLMNPSEITRRMCSSANYDTDDSKF-----GSRGMLSRSQVTQGEHPLSLGKTSIWNQF 108
L+ + IT + + D G++ Q P + K +
Sbjct: 112 PLVGSGRFITAPVVTDDGVPVQDPLVLLENNPENGVIVPPQEVGAPSPNNTAKKVTDKKV 171
Query: 109 FQDSDIIEQIDRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNE 168
Q + QI DV RT + F+ K N L +IL ++A+++ + Y QGM++
Sbjct: 172 IQWMLTLHQIGLDVIRTDRTLVFY-----EKKENLSKLWDILAVYARIDNDVGYGQGMSD 226
Query: 169 ILAPLFYVLKNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQ 228
+ +P+ +L + EAD+F+CF L+ LR NF + N+ VG+ + + L+
Sbjct: 227 LCSPMIILLDD----------EADSFWCFERLMRRLRGNF--RCTNNSVGVETQLNNLAS 274
Query: 229 LLKEHDEELWRHLE 242
+ + D +L +H+E
Sbjct: 275 ITQVIDPKLHQHIE 288
>Medtr3g092100.1 | Rab GTPase activator | HC |
chr3:42056500-42051571 | 20130731
Length = 551
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 146 LKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKNDPEEEHAAFAEADTFFCFVELLSGLR 205
L IL +A +P I Y QGM+++L+P+ V+ D E F+CFV + R
Sbjct: 342 LVAILEAYALYDPEIGYCQGMSDLLSPIICVVSEDHE----------AFWCFVGFMKKAR 391
Query: 206 DNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRHLE 242
NF +LD VGIR + +++++K D L+RHLE
Sbjct: 392 QNF--RLDE--VGIRRQLDIVAKIIKFKDSHLFRHLE 424
>Medtr2g083220.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr2:34944012-34938150 | 20130731
Length = 443
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 115 IEQIDRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLF 174
+ QI DV RT + F+ + N L +IL ++A ++ + Y QGM+++ +P+
Sbjct: 182 LHQIGLDVVRTDRTLVFY-----EKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMI 236
Query: 175 YVLKNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHD 234
+L + EAD F+CF L+ LR NF + +G+ + ++ L+ + + D
Sbjct: 237 ILLDD----------EADAFWCFERLMRRLRGNF--RCTGRTLGVEAQLSNLASITQVID 284
Query: 235 EELWRHLE 242
+L +H+E
Sbjct: 285 PKLHKHIE 292
>Medtr2g037930.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr2:16450205-16455298 | 20130731
Length = 869
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 88 SQVTQGEHPLSLGKTSIWNQFFQDSDIIEQIDRDVKRTHPDIHFFCGDSQFAKSNQESLK 147
S + ++PLS S W++FF+++++ +D+D+ R +P+ G Q L+
Sbjct: 87 SPTLEMDNPLSQNPDSTWSRFFRNAELERLVDQDLSRLYPE----HGSYFQTPGCQGMLR 142
Query: 148 NILIIFAKLNPGIRYVQGMNEILAPLFYVLKNDPE 182
IL+++ +P Y QGM+E+LAP YVL+ D E
Sbjct: 143 RILLLWCLKHPDCGYRQGMHELLAPFLYVLQVDLE 177
>Medtr2g099185.2 | Rab GTPase activator | HC |
chr2:42550462-42545186 | 20130731
Length = 525
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 115 IEQIDRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLF 174
+ +I DV RT + F+ A+ + +IL ++A ++P Y QGM+++L+P
Sbjct: 367 LHRIVVDVVRTDNHLEFYEDRRNLAR-----MSDILAVYAWVDPATGYCQGMSDLLSPFV 421
Query: 175 YVLKNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHD 234
+ +++ AD F+CF LL +R+NF + V+ + L +L+ D
Sbjct: 422 VIFEDN----------ADAFWCFEMLLRRMRENFKMEGPTRVM---KQLRALWHILELSD 468
Query: 235 EELWRHL 241
+EL+ HL
Sbjct: 469 KELFAHL 475
>Medtr2g099185.3 | Rab GTPase activator | HC |
chr2:42550766-42545779 | 20130731
Length = 530
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 115 IEQIDRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLF 174
+ +I DV RT + F+ A+ + +IL ++A ++P Y QGM+++L+P
Sbjct: 372 LHRIVVDVVRTDNHLEFYEDRRNLAR-----MSDILAVYAWVDPATGYCQGMSDLLSPFV 426
Query: 175 YVLKNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHD 234
+ +++ AD F+CF LL +R+NF + V+ + L +L+ D
Sbjct: 427 VIFEDN----------ADAFWCFEMLLRRMRENFKMEGPTRVM---KQLRALWHILELSD 473
Query: 235 EELWRHL 241
+EL+ HL
Sbjct: 474 KELFAHL 480
>Medtr2g099185.1 | Rab GTPase activator | HC |
chr2:42550462-42544781 | 20130731
Length = 671
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 115 IEQIDRDVKRTHPDIHFFCGDSQFAKSNQESLKNILIIFAKLNPGIRYVQGMNEILAPLF 174
+ +I DV RT + F+ A+ + +IL ++A ++P Y QGM+++L+P
Sbjct: 367 LHRIVVDVVRTDNHLEFYEDRRNLAR-----MSDILAVYAWVDPATGYCQGMSDLLSPFV 421
Query: 175 YVLKNDPEEEHAAFAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITRLSQLLKEHD 234
+ +++ AD F+CF LL +R+NF + V+ + L +L+ D
Sbjct: 422 VIFEDN----------ADAFWCFEMLLRRMRENFKMEGPTRVM---KQLRALWHILELSD 468
Query: 235 EELWRHL 241
+EL+ HL
Sbjct: 469 KELFAHL 475
>Medtr1g007590.1 | Rab GTPase activator | HC | chr1:448550-444327 |
20130731
Length = 591
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 146 LKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKNDPEEEHAAFAEADTFFCFVELLSGLR 205
L IL +A + I Y QGM+++L+P+ ++ D E F+CFV + R
Sbjct: 387 LVAILEAYALYDSEIGYCQGMSDLLSPIVSIISEDHE----------AFWCFVGFMKKAR 436
Query: 206 DNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRHLE 242
NF +LD VGIR + +++++K D L++HLE
Sbjct: 437 QNF--RLDE--VGIRRQLELVAKIIKYKDGHLFKHLE 469
>Medtr1g007590.2 | Rab GTPase activator | HC | chr1:448550-444409 |
20130731
Length = 496
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 146 LKNILIIFAKLNPGIRYVQGMNEILAPLFYVLKNDPEEEHAAFAEADTFFCFVELLSGLR 205
L IL +A + I Y QGM+++L+P+ ++ D E F+CFV + R
Sbjct: 292 LVAILEAYALYDSEIGYCQGMSDLLSPIVSIISEDHE----------AFWCFVGFMKKAR 341
Query: 206 DNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRHLE 242
NF +LD VGIR + +++++K D L++HLE
Sbjct: 342 QNF--RLDE--VGIRRQLELVAKIIKYKDGHLFKHLE 374