Miyakogusa Predicted Gene
- Lj0g3v0332239.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332239.2 tr|G7JA63|G7JA63_MEDTR TBC1 domain family member
OS=Medicago truncatula GN=MTR_3g083840 PE=4 SV=1,87.04,0,Ypt/Rab-GAP
domain of gyp1p,Rab-GTPase-TBC domain; TBC_RABGAP,Rab-GTPase-TBC
domain; no description,,CUFF.22646.2
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58759 similar to UniRef100_A7QHM3 Cluster: Chromosome... 551 e-156
gnl|LJGI|TC69361 homologue to UniRef100_A7QHM3 Cluster: Chromoso... 424 e-118
gnl|LJGI|FS336750 similar to UniRef100_A7QHM3 Cluster: Chromosom... 254 7e-67
>gnl|LJGI|TC58759 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1616
Score = 551 bits (278), Expect = e-156
Identities = 631/748 (84%), Gaps = 8/748 (1%)
Strand = Plus / Plus
Query: 37 cctgatgcttctggtttgcgttctacagtctggaagcttttgcttgggtatcttccgcaa 96
|||||||||||||| | || || || || ||||||||||||||||| ||||||| || |
Sbjct: 385 cctgatgcttctgggatacgctccaccgtgtggaagcttttgcttggatatcttctgcca 444
Query: 97 gatcgcgccctttggtcctctgaattagcaaagaagaggtcccagtacaaacatttcaaa 156
||||| | |||||||| ||||||||||| |||||||| |||||||||| || ||||||
Sbjct: 445 gatcgagggctttggtcatctgaattagcgaagaagagaacccagtacaagcagttcaaa 504
Query: 157 gacgaccttctcatgaatccttcagaaatcacaaggaggatgtgcagttcggctaattat 216
|| || |||||||||||||||||||||| ||| ||| ||||| || || || || |
Sbjct: 505 gaggaggttctcatgaatccttcagaaataacatggaagatgtacaactcccttagttgt 564
Query: 217 gacaccgacgactccaaatttgggagtaggggcatgctttctagatcacaagtcactcaa 276
|| | || || |||||| || ||| || | |||| || |||||| || |||||||
Sbjct: 565 gatagtgatgaagccaaatgtgagag---ggccttgctctccagatcagaaatcactcat 621
Query: 277 ggagaacaccctttgagtcttggcaagaccagcatatggaaccaattcttccaggactca 336
|| || |||||||| || ||||| ||||||||| ||||||| || |||||||||||| ||
Sbjct: 622 ggggagcaccctttaagccttgggaagaccagcgtatggaatcagttcttccaggacaca 681
Query: 337 gatatcatagaacagattgaccgagatgtaaagcgcactcatccagatatacacttcttc 396
|| |||||||| ||||||||||||||||| | |||||||||||| ||||| |||||||||
Sbjct: 682 gagatcatagatcagattgaccgagatgtgatgcgcactcatcctgatatgcacttcttc 741
Query: 397 tgtggtgattctcagtttgccaaatctaatcaggagtctttaaagaacatattaattatc 456
| |||||||||||| ||||| ||| ||||||||| |||||||||||||| |||||||
Sbjct: 742 tctggtgattctcaatttgcaaaactgaatcaggaggctttaaagaacatactaattatt 801
Query: 457 tttgcaaagttgaacccaggtataagatatgttcaagggatgaatgagatattggctcct 516
|| || ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 802 ttcgccaagttaaacccaggtgtaagatatgttcaagggatgaatgaggtattggctcct 861
Query: 517 ctattctatgtgttaaaaaatgaccctgaggaggaacatgcggcctttgctgaagcagat 576
|| ||||||||||| || ||||||||||| |||||| || |||||||||||||||| |||
Sbjct: 862 ctgttctatgtgttcaagaatgaccctgatgaggaaaattcggcctttgctgaagctgat 921
Query: 577 acattcttttgttttgttgaattattgagtggactccgagataatttttgccaacaactt 636
|| ||||||||||||||||| |||||||||| |||||||||| ||| |||||| |
Sbjct: 922 acgttcttttgttttgttgagctattgagtgggttccgagataactttgttcaacaatta 981
Query: 637 gacaatagtgtggttggaatccgttcaaccattacaagattgtctcagcttttaaaagaa 696
||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 982 gacaacagtgctgttggaatccgtgcaactattacaagattgtctcagcttttaaaagaa 1041
Query: 697 catgatgaagaactgtggcgtcatcttgaagtcacgactaaagtaaggtcaatccccagt 756
||||||||||| ||||||||||||||||| |||| ||||| ||||||||||| |
Sbjct: 1042 catgatgaagagctgtggcgtcatcttgagatcacttctaaa-----gtcaatccccaat 1096
Query: 757 tttattcatttaggtggattactctcct 784
| ||| ||||||||||||| ||||||||
Sbjct: 1097 tctatgcatttaggtggatcactctcct 1124
>gnl|LJGI|TC69361 homologue to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 691
Score = 424 bits (214), Expect = e-118
Identities = 232/238 (97%), Gaps = 5/238 (2%)
Strand = Plus / Plus
Query: 555 tgcggcctttgctgaagcagatacattcttttgttttgttgaattattgagtggactccg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcggcctttgctgaagcagatacattcttttgttttgttgaattattgagtggactccg 60
Query: 615 agataatttttgccaacaacttgacaatagtgtggttggaatccgttcaaccattacaag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agataatttttgccaacaacttgacaatagtgtggttggaatccgttcaaccattacaag 120
Query: 675 attgtctcagcttttaaaagaacatgatgaagaactgtggcgtcatcttgaagtcacgac 734
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgtcccagcttttaaaagaacatgatgaagaactgtggcgtcatcttgaagtcacgac 180
Query: 735 taaagtaaggtcaatccccagttttattcatttaggtggattactctcctcttaactc 792
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaa-----gtcaatccccagttttattcatttaggtggattactctcctcttaactc 233
>gnl|LJGI|FS336750 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 563
Score = 254 bits (128), Expect = 7e-67
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1 atgcgggaattgagaagactcgcatctcaaggcattcctgatgcttctggtttgcgttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atgcgggaattgagaagactcgcatctcaaggcattcctgatgcttctggtttgcgttct 495
Query: 61 acagtctggaagcttttgcttgggtatcttccgcaagatcgcgccctttggtcctctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 acagtctggaagcttttgcttgggtatcttccgcaagatcgcgccctttggtcctctgaa 555
Query: 121 ttagcaaa 128
||||||||
Sbjct: 556 ttagcaaa 563