Miyakogusa Predicted Gene

Lj0g3v0299849.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M3E7_SOYBN 409 72.6 78.2 (tr|K7M3E7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G29050.1 389 61.3 72.8 | Symbols: ATRBL1, RBL1 | RHOMBOID-like 1 | chr2:12478245-12480121 FORWARD LENGTH=389
Medicago Medtr2g097210.1 404 66.7 76.0 | inactive rhomboid-like protein | HC | chr2:41509279-41506033 | 20130731
Soybean Glyma13g41170.1 410 72.6 78.2  
LJGI gnl|LJGI|TC62780 797 100.0 100.0 similar to UniRef100_A7NYY8 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0299849.1 length: 353 aa.
IPR002610 Peptidase S54, rhomboid
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR22936 RHOMBOID-RELATED 6.8e-105 56-342
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 2.2e-51 74-229
HMMPfam PF01694 Rhomboid 2.5e-49 90-233
no_ID  
HMMPanther PTHR22936:SF0 SUBFAMILY 6.8e-105 56-342
Seg seg seg NA 22-31
160-174
188-203
216-229
superfamily SSF144091 Rhomboid-like 4e-35 32-236
Putative transmembrane regions
  From To
TM segments
SOSUI		 103 125
131 153
159 181
186 208
213 235
262 284
Wolf-PSORT
Lj0g3v0299849.1	plas 6, E.R. 2, mito 1.5, cyto_mito 1.5, chlo 1, nucl 1, pero 1, golg 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0299849.1