Miyakogusa Predicted Gene
- Lj0g3v0299849.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0299849.1 Non Chatacterized Hit- tr|I1MDE7|I1MDE7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.48,0,no
description,NULL; Rhomboid,Peptidase S54, rhomboid domain; SUBFAMILY
NOT NAMED,NULL; RHOMBOID-REL,CUFF.20147.1
(1062 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62780 similar to UniRef100_A7NYY8 Cluster: Chromosome... 797 0.0
gnl|LJGI|TC59464 similar to UniRef100_A7NYY8 Cluster: Chromosome... 640 0.0
gnl|LJGI|TC77611 similar to UniRef100_A7PNN3 Cluster: Chromosome... 121 9e-27
gnl|LJGI|TC59912 similar to UniRef100_A7QVI2 Cluster: Chromosome... 64 2e-09
gnl|LJGI|BP055034 similar to UniRef100_A7QVI2 Cluster: Chromosom... 56 5e-07
gnl|LJGI|TC62934 similar to UniRef100_A7QVI2 Cluster: Chromosome... 56 5e-07
>gnl|LJGI|TC62780 similar to UniRef100_A7NYY8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 736
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 661 ggctttcttcttgggtttgtctttctgattcgtccacagtttaaatggattagccaaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctttcttcttgggtttgtctttctgattcgtccacagtttaaatggattagccaaaga 60
Query: 721 aatcatagtgctgggtatgctgcaccttctgtgaaacataagcacaaaccttatcagtat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcatagtgctgggtatgctgcaccttctgtgaaacataagcacaaaccttatcagtat 120
Query: 781 gcactgtggatcatctctttcacattactgactgctggattgattactgggctggttttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcactgtggatcatctctttcacattactgactgctggattgattactgggctggttttg 180
Query: 841 ctccttcgaggtgttgacatgaatgatcgttgctcctggtgtcattatttaagttgtgtc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccttcgaggtgttgacatgaatgatcgttgctcctggtgtcattatttaagttgtgtc 240
Query: 901 cctacctcaaaatggagctgccaaaatcaaaatatttactgtgagacaacacaaatagga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctacctcaaaatggagctgccaaaatcaaaatatttactgtgagacaacacaaatagga 300
Query: 961 aaccaactcaacataacatgcttgagcaatgggaaaagtgacatgtttcctctgcctagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaccaactcaacataacatgcttgagcaatgggaaaagtgacatgtttcctctgcctagc 360
Query: 1021 tcttctgaggctcaacaactatgttctcaactttgcagttga 1062
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttctgaggctcaacaactatgttctcaactttgcagttga 402
>gnl|LJGI|TC59464 similar to UniRef100_A7NYY8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 743
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 166 tttctgggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttcc 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttctgggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttcc 480
Query: 226 tccacattagagaagatgggtgctatggaagttgataaagtggttcatagacaccaggtt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccacattagagaagatgggtgctatggaagttgataaagtggttcatagacaccaggtt 540
Query: 286 tggcgtctcttctcttgcatgtggttgcacggtggggtcgtccatgtgcttgccaacatg 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggcgtctcttctcttgcatgtggttgcacggtggggtcgtccatgtgcttgccaacatg 600
Query: 346 ttgagtcttgtttttatcggaattcggcttgagcaagaatttggatttgttcgaattgga 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagtcttgtttttatcggaattcggcttgagcaagaatttggatttgttcgaattgga 660
Query: 406 tttgtgtatgtgatatctggttttggagggagtttgttgtctgctctattcatacaatca 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttgtgtatgtgatatctggttttggagggagtttgttgtctgctctattcatacaatca 720
Query: 466 ggcatctcggttggtgcttccgg 488
|||||||||||||||||||||||
Sbjct: 721 ggcatctcggttggtgcttccgg 743
Score = 285 bits (144), Expect = 3e-76
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 atggggacaccgccgccgctcaccccggacggggccctccgccgcccgttcccgatcgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atggggacaccgccgccgctcaccccggacggggccctccgccgcccgttcccgatcgcg 286
Query: 61 acttcagcctcttcaagcggtggttcccgtggcttgttccgacctttgtggtggccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 acttcagcctcttcaagcggtggttcccgtggcttgttccgacctttgtggtggccaaca 346
Query: 121 ttgccgtgtttcttgtcaccatgt 144
||||||||||||||||||||||||
Sbjct: 347 ttgccgtgtttcttgtcaccatgt 370
>gnl|LJGI|TC77611 similar to UniRef100_A7PNN3 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1316
Score = 121 bits (61), Expect = 9e-27
Identities = 280/353 (79%)
Strand = Plus / Plus
Query: 166 tttctgggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttcc 225
||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 424 tttctgggtcgtttctcctttcagcctttcaaggagaatcccctcttgggtccttcttca 483
Query: 226 tccacattagagaagatgggtgctatggaagttgataaagtggttcatagacaccaggtt 285
| || || |||||||||| ||| | || || ||| |||||| || |||||||||| |
Sbjct: 484 ttgacgttgcagaagatgggggctcttgatgtgaatagagtggtccacagacaccagggt 543
Query: 286 tggcgtctcttctcttgcatgtggttgcacggtggggtcgtccatgtgcttgccaacatg 345
||||| ||| ||||||| |||||| | || | |||||| |||||| | | | || |||
Sbjct: 544 tggcgcctcatctcttgtatgtggctacatgctggggttgtccatctattgtcaaatatg 603
Query: 346 ttgagtcttgtttttatcggaattcggcttgagcaagaatttggatttgttcgaattgga 405
|| || || | || || ||||||||||| |||||||||||||| ||||| | ||||||
Sbjct: 604 ctgggtattctattcattggaattcggctagagcaagaatttgggtttgtgcttattgga 663
Query: 406 tttgtgtatgtgatatctggttttggagggagtttgttgtctgctctattcatacaatca 465
|| | | ||| |||||||| ||||| ||||||||| | |||||||| || || || |||
Sbjct: 664 ttgctatttgtcatatctggatttggggggagtttgctttctgctctttttattcagtca 723
Query: 466 ggcatctcggttggtgcttccggtgcgttatttggcttactaggagggatgct 518
||| || || |||||||| ||||| | |||||||| || ||||| |||||
Sbjct: 724 aacatttctgtcggtgcttctggtgcactttttggcttgctcggaggcatgct 776
>gnl|LJGI|TC59912 similar to UniRef100_A7QVI2 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1369
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 169 ctgggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttc 224
||||||||||||||||||||||| ||| ||||||||| || ||||| ||||||||
Sbjct: 372 ctgggtagattctcctttcagcctctccgggagaatccactgtttggaccttcttc 427
>gnl|LJGI|BP055034 similar to UniRef100_A7QVI2 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 515
Score = 56.0 bits (28), Expect = 5e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 172 ggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttcctc 227
|||||||||||||||||||| || |||||||||| | ||||||||||||||||
Sbjct: 339 ggtagattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctc 394
>gnl|LJGI|TC62934 similar to UniRef100_A7QVI2 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1289
Score = 56.0 bits (28), Expect = 5e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 172 ggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttcctc 227
|||||||||||||||||||| || |||||||||| | ||||||||||||||||
Sbjct: 367 ggtagattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctc 422