Miyakogusa Predicted Gene
- Lj0g3v0299849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0299849.1 Non Characterized Hit- tr|I1MDE7|I1MDE7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.48,0,no
description,NULL; Rhomboid,Peptidase S54, rhomboid domain; SUBFAMILY
NOT NAMED,NULL; RHOMBOID-REL,CUFF.20147.1
(353 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g097210.1 | inactive rhomboid-like protein | HC | chr2:415... 404 e-113
Medtr4g021755.1 | inactive rhomboid-like protein | HC | chr4:721... 299 4e-81
Medtr2g097210.2 | inactive rhomboid-like protein | HC | chr2:415... 271 9e-73
Medtr7g498280.1 | inactive rhomboid-like protein | HC | chr7:392... 269 3e-72
Medtr7g061780.1 | S54 family peptidase | HC | chr7:22356603-2235... 253 3e-67
Medtr1g101310.1 | inactive rhomboid-like protein | HC | chr1:457... 244 6e-65
Medtr3g073530.1 | inactive rhomboid-like protein | HC | chr3:331... 202 3e-52
Medtr2g103600.1 | S54 family peptidase | HC | chr2:44609705-4460... 191 1e-48
Medtr2g088290.1 | S54 family peptidase | LC | chr2:37206799-3720... 92 7e-19
Medtr2g088315.1 | S54 family peptidase | LC | chr2:37209285-3720... 81 1e-15
Medtr7g107390.1 | rhomboid family protein | HC | chr7:43813742-4... 50 5e-06
Medtr7g107390.2 | rhomboid family protein | HC | chr7:43813742-4... 49 7e-06
>Medtr2g097210.1 | inactive rhomboid-like protein | HC |
chr2:41509279-41506033 | 20130731
Length = 383
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 228/300 (76%), Gaps = 3/300 (1%)
Query: 56 FLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANM 115
FLGRFSFQPLKENPLFGPSS TL+KMGA+EVDKVVH H+ WRL SC+WLHGG +HVLANM
Sbjct: 82 FLGRFSFQPLKENPLFGPSSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANM 141
Query: 116 LSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXXE 175
LSL+FIGIRLEQEFGFVRIGF+YVISGFGGSLLS+LFIQ+GISV E
Sbjct: 142 LSLLFIGIRLEQEFGFVRIGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSE 201
Query: 176 LLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXXXIRPQFK 235
L INWTIYANK G+LPHVDNFAH+ IRPQFK
Sbjct: 202 LFINWTIYANKMAALLTLIIIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFK 261
Query: 236 WISQRNHSAGYAAPSVK-HKHKPYQYALWIISFTLLTAGLITGLVLLLRGVDMNDRCSWC 294
WISQ+ +G A SVK +K+ PYQY LW++SF LL AG I G+VLL RGV++N+RCSWC
Sbjct: 262 WISQQQSKSGSHAFSVKQNKYLPYQYVLWVLSFLLLIAGFIAGMVLLFRGVNLNERCSWC 321
Query: 295 HYLSCVPTSKWSCQNQNIYCETTQIGNQLNITCLSNGKSDMFPLP--SSSEAQQLCSQLC 352
HYLSCVPTSKWSCQ Q+IYCETT+ GNQLNITC+SNG+SD++PL SSS+ QQLCSQLC
Sbjct: 322 HYLSCVPTSKWSCQEQSIYCETTEFGNQLNITCMSNGRSDIYPLSNTSSSDRQQLCSQLC 381
>Medtr4g021755.1 | inactive rhomboid-like protein | HC |
chr4:7215110-7210484 | 20130731
Length = 399
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/259 (57%), Positives = 170/259 (65%)
Query: 56 FLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANM 115
FL RF+FQPLKENPL GPSS TL+KMGA++VDKVVH HQ WRL +CMWLHGGV H+LANM
Sbjct: 78 FLKRFAFQPLKENPLLGPSSLTLQKMGALDVDKVVHGHQGWRLITCMWLHGGVFHLLANM 137
Query: 116 LSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXXE 175
L ++FIGIRLEQEFGFV IG ++VISGFGGSLLSALFIQS ISV E
Sbjct: 138 LGILFIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGAMLSE 197
Query: 176 LLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXXXIRPQFK 235
L+ NW++Y NK GILPHVDNFAHI IRPQF
Sbjct: 198 LITNWSMYDNKIAALFTLVIIIVVNLAIGILPHVDNFAHIGGFLAGFLLGFVFLIRPQFG 257
Query: 236 WISQRNHSAGYAAPSVKHKHKPYQYALWIISFTLLTAGLITGLVLLLRGVDMNDRCSWCH 295
W++QR Y+ K K YQ LW++S +L GL GLV LL G+D ND CSWCH
Sbjct: 258 WVNQRYARVEYSPTRATPKFKKYQCILWVLSLIILIVGLSGGLVALLSGIDANDHCSWCH 317
Query: 296 YLSCVPTSKWSCQNQNIYC 314
YLSCVPTSKW+C + YC
Sbjct: 318 YLSCVPTSKWNCHTEAAYC 336
>Medtr2g097210.2 | inactive rhomboid-like protein | HC |
chr2:41509232-41506033 | 20130731
Length = 300
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 56 FLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANM 115
FLGRFSFQPLKENPLFGPSS TL+KMGA+EVDKVVH H+ WRL SC+WLHGG +HVLANM
Sbjct: 82 FLGRFSFQPLKENPLFGPSSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANM 141
Query: 116 LSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXXE 175
LSL+FIGIRLEQEFGFVRIGF+YVISGFGGSLLS+LFIQ+GISV E
Sbjct: 142 LSLLFIGIRLEQEFGFVRIGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSE 201
Query: 176 LLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXXXIRPQFK 235
L INWTIYANK G+LPHVDNFAH+ IRPQFK
Sbjct: 202 LFINWTIYANKMAALLTLIIIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFK 261
Query: 236 WISQRNHSAGYAAPSVK-HKHKPYQYALWIISFTLLTAG 273
WISQ+ +G A SVK +K+ PYQY LW++SF LL AG
Sbjct: 262 WISQQQSKSGSHAFSVKQNKYLPYQYVLWVLSFLLLIAG 300
>Medtr7g498280.1 | inactive rhomboid-like protein | HC |
chr7:39278810-39283545 | 20130731
Length = 326
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/255 (55%), Positives = 168/255 (65%), Gaps = 3/255 (1%)
Query: 56 FLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANM 115
FLGRFSFQPLKENPL GPSS TL KMGA++ D VV+ HQ WRL SC+WLH G++H+ ANM
Sbjct: 75 FLGRFSFQPLKENPLLGPSSETLTKMGALKWDAVVNHHQGWRLVSCIWLHAGIIHLAANM 134
Query: 116 LSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXXE 175
+SLVFIGIRLEQ+FGFVRIG VY++SGFGGS+LSALFI+ ISV E
Sbjct: 135 ISLVFIGIRLEQQFGFVRIGIVYLVSGFGGSILSALFIRKSISVGASGALFGLLGAMLSE 194
Query: 176 LLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXXXIRPQFK 235
L+ NW+IY NK G+LPHVDNFAHI RPQF
Sbjct: 195 LITNWSIYTNKVAALMTLLFIIVINLVIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFG 254
Query: 236 WISQRNHSAGYAAPSVKHKHKPYQYALWIISFTLLTAGLITGLVLLLRGVDMNDRCSWCH 295
W++QR+ AG +K K+K YQY LW++S LL AGL GLV+LLRG D C WCH
Sbjct: 255 WLAQRHVPAGV---RLKSKYKVYQYVLWVVSLVLLIAGLCIGLVMLLRGESGYDHCHWCH 311
Query: 296 YLSCVPTSKWSCQNQ 310
YL+CVPTSKW C +
Sbjct: 312 YLTCVPTSKWKCDDS 326
>Medtr7g061780.1 | S54 family peptidase | HC |
chr7:22356603-22354034 | 20130731
Length = 335
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 152/244 (62%), Gaps = 3/244 (1%)
Query: 56 FLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANM 115
FLGRFSFQP ENPL GPS TL MGA++V +VV+RHQ WRL +CMWLHGGV H+LANM
Sbjct: 62 FLGRFSFQPFHENPLLGPSLLTLTSMGALDVHQVVYRHQGWRLMTCMWLHGGVFHLLANM 121
Query: 116 LSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXXE 175
L ++ +GIRLEQ+FGFV IG +YVISGFGGSLLS+LFIQ ISV E
Sbjct: 122 LGILVVGIRLEQDFGFVLIGVLYVISGFGGSLLSSLFIQQRISVGASSALFGLLGAMLSE 181
Query: 176 LLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXXXIRPQFK 235
L+ NW+IY + GI PHVDNFAHI IRPQF
Sbjct: 182 LITNWSIYEKRLGTLITLVSIIVINLAVGIFPHVDNFAHIGGFISGFLLGFVFLIRPQFG 241
Query: 236 WISQRNHSAGYAAPS-VKHKHKPYQYALWIISFTLLTAGLITGLVLLLRGVDMNDRCSWC 294
WI Q+ + Y PS VK K K YQ W+++ LL G GLV LLRGVD ND CSWC
Sbjct: 242 WIKQKYATPAY--PSLVKSKFKIYQCISWLLALILLIVGFTLGLVALLRGVDANDHCSWC 299
Query: 295 HYLS 298
HYLS
Sbjct: 300 HYLS 303
>Medtr1g101310.1 | inactive rhomboid-like protein | HC |
chr1:45761926-45764419 | 20130731
Length = 319
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 156/255 (61%), Gaps = 12/255 (4%)
Query: 56 FLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANM 115
FL RFSFQP +ENPL GPSS TL KMGA+ VVH+HQ WRLF+C+WLH G++H+L+NM
Sbjct: 76 FLHRFSFQPFRENPLLGPSSLTLIKMGALRWVNVVHQHQEWRLFTCIWLHAGIIHLLSNM 135
Query: 116 LSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXXE 175
L LV IGIRLEQ+FGFV+IG +Y++SGFGGS+ S++FI++ ISV E
Sbjct: 136 LCLVLIGIRLEQQFGFVKIGLIYLLSGFGGSVFSSIFIRNSISVGASSALFGLLGAMISE 195
Query: 176 LLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXXXIRPQFK 235
LL NWTIY+NK G+LP VDN AHI RPQ+
Sbjct: 196 LLTNWTIYSNKVMALLTLLVMIAINLTIGLLPRVDNLAHIGGLVVGFLLGFILLPRPQYD 255
Query: 236 WISQRNHSAGYAAPSVKHKHKPYQYALWIISFTLLTAGLITGLVLLLRGVDMNDRCSWCH 295
+ + K K+ YQ+ L I+S LLTAGL GLV+L RG + D C WCH
Sbjct: 256 GVLR------------KSKYNAYQFVLGIVSLVLLTAGLSFGLVMLFRGENGYDHCHWCH 303
Query: 296 YLSCVPTSKWSCQNQ 310
YL+CVP+S+W C +
Sbjct: 304 YLTCVPSSRWECNSN 318
>Medtr3g073530.1 | inactive rhomboid-like protein | HC |
chr3:33161562-33158511 | 20130731
Length = 379
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 172/313 (54%), Gaps = 14/313 (4%)
Query: 49 ECSFLDYFLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWLHGGV 108
+C+F LGRFSFQPL ENPL GPS S L++MGA++ + + RHQ WRLF+ +LH G+
Sbjct: 72 DCTFPS--LGRFSFQPLAENPLLGPSMSKLDEMGALQKNFLTERHQTWRLFTFPFLHAGL 129
Query: 109 VHVLANMLSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXXXXXX 168
H++ N+ S++++GIRLEQEFG +RIG VY++S F G+L+++LF+Q+ V
Sbjct: 130 FHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFVGALMASLFLQNIPVVGSSGALFGL 189
Query: 169 XXXXXXELLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXXXXXXXXXXX 228
EL+ NW + K G LP+VDNF+ I
Sbjct: 190 LGALLSELVWNWKYHTKKISEVASFVFIFVCNFLLGFLPYVDNFSSIGGFISGFLLGTVL 249
Query: 229 XIRPQFKWIS-----QRNHS-AGYAAPSVKHK-HKPYQYALWIISFTLLTAGLITGLVLL 281
PQF+ ++ Q ++ Y +K K +P + +I FTLL AG L+ +
Sbjct: 250 LFAPQFQQVTPSKGDQIDYDLKSYIKLKLKQKLDRPVSRIVSLILFTLLLAGC---LLAV 306
Query: 282 LRGVDMNDRCSWCHYLSCVPTSKWSCQNQNIYCETTQIGNQLNITCLSNGKSDMFPLPSS 341
L G+++N C+WC Y+ C+P + W C+++ +CET L +TCL NG +F +
Sbjct: 307 LYGININSYCTWCPYVDCIPFTSWHCKDRETFCETMVSNAHLTMTCLGNGNFKVFHYTNI 366
Query: 342 SEAQ--QLCSQLC 352
S A+ LC+ +C
Sbjct: 367 SRARINDLCNLIC 379
>Medtr2g103600.1 | S54 family peptidase | HC |
chr2:44609705-44607548 | 20130731
Length = 316
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 143/257 (55%), Gaps = 8/257 (3%)
Query: 42 PCFLSPCECSFLDYFLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSC 101
P +L+ +C + Y LG+FSFQP ENPL GPS TL +GA+E D VV ++VWR +C
Sbjct: 57 PGYLNEDDCLWYQY-LGKFSFQPFNENPLLGPSVRTLRVLGALERDLVVGENEVWRFITC 115
Query: 102 MWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQ-----SG 156
M+LH GV+H+LANM SL+FIG+RLE EFGF++IG +Y++SGFGGSLLS L + +
Sbjct: 116 MFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIGVLYLLSGFGGSLLSILHMGDVKAPNT 175
Query: 157 ISVXXXXXXXXXXXXXXXELLINWTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIX 216
+SV ELL NWTIY NK G +PHVDN AHI
Sbjct: 176 VSVGASGALFGLLGAMLSELLTNWTIYLNKCAALTSLLLIIGLNLAVGFIPHVDNSAHIG 235
Query: 217 XXXXXXXXXXXXXIRPQFKWISQRNHSAGYAAPSVKHKHKPYQYALWIISFTLLTAGLIT 276
+RPQF +++ + GY A K K+K YQY ++S L G
Sbjct: 236 GFLSGFFLGFVILMRPQFGYVNNKYIPPGYDAKR-KSKYKGYQYFFLVLSVITLLIGYAY 294
Query: 277 GLVLLLRGVDMNDRCSW 293
GL L G + ND S+
Sbjct: 295 GLATLYIG-ESNDVFSY 310
>Medtr2g088290.1 | S54 family peptidase | LC |
chr2:37206799-37206087 | 20130731
Length = 220
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 110/273 (40%), Gaps = 68/273 (24%)
Query: 45 LSPCECSFLDYFLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVHRHQVWRLFSCMWL 104
++P C L FLG SFQP+ +NPL G S TL KMG M K H
Sbjct: 9 IAPHSC--LASFLGILSFQPITQNPLLGSSPLTLVKMGTMYFKKSDRLHH---------- 56
Query: 105 HGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFVYVISGFGGSLLSALFIQSGISVXXXXX 164
++FG+VRI ++ +SG G SL SALFI + +SV
Sbjct: 57 ----------------------KKFGYVRIEILHTMSGMGSSLFSALFIPTSVSVGVSGA 94
Query: 165 XXXXXXXXXXELLIN-----WTIYANKFXXXXXXXXXXXXXXXXGILPHVDNFAHIXXXX 219
+L+++ WT+ I+ +NF I
Sbjct: 95 IMGLVGGTLSDLIMHPNKSIWTLIGAIIIRSGLVL----------IISQANNFGIIGGLI 144
Query: 220 XXXXXXXXXXIRPQFKWISQRNHSAGYAAPSVKHKHKPYQYALWIISFTLLTAGLITGLV 279
I + + R HS + P Q AL + S LLT L+ G+V
Sbjct: 145 TE--------ILLGYVLLISRKHS----------RFAPCQQALRVNSSVLLTIRLMGGMV 186
Query: 280 LLLRGVDMNDRCSWCHYLSCVPTSKWSCQNQNI 312
L L+GV M+D CSW HYL CVP K +C+ ++
Sbjct: 187 LFLKGVAMSDHCSWYHYLRCVPI-KRNCKPNHV 218
>Medtr2g088315.1 | S54 family peptidase | LC |
chr2:37209285-37209034 | 20130731
Length = 83
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 55/79 (69%)
Query: 81 MGAMEVDKVVHRHQVWRLFSCMWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFVYVI 140
MGAM K H +RLF+C+WLH GV+ +L NML++++ I LE++FG++RI ++ +
Sbjct: 1 MGAMYFQKSDRLHHAYRLFTCLWLHAGVIDLLLNMLNILYYYIYLEKKFGYIRIAILHTM 60
Query: 141 SGFGGSLLSALFIQSGISV 159
SG G +L SAL I + +SV
Sbjct: 61 SGMGSNLFSALCIPTSVSV 79
>Medtr7g107390.1 | rhomboid family protein | HC |
chr7:43813742-43820538 | 20130731
Length = 409
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 37 WWPTLPCFLSPC-----ECSFLDYFLGRFSFQPLKENPLFGPSSSTLEKMGAMEVDKVVH 91
WW +P F S F+ +G SF + F PS+ VV
Sbjct: 24 WWENIPFFTSAVVIVCGAIYFVCLLVGYDSFSEI----CFLPSA-------------VVS 66
Query: 92 RHQVWRLFSCMWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFVYVI 140
R QV+R+++ + HG ++HVL NM++LV +G LE+ G VR+ +V ++
Sbjct: 67 RFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVTIL 115
>Medtr7g107390.2 | rhomboid family protein | HC |
chr7:43813742-43818623 | 20130731
Length = 358
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 87 DKVVHRHQVWRLFSCMWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFVYVI 140
VV R QV+R+++ + HG ++HVL NM++LV +G LE+ G VR+ +V ++
Sbjct: 62 SAVVSRFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVTIL 115