Miyakogusa Predicted Gene
- Lj0g3v0288639.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M0S2_SOYBN |
301 |
73.5 |
81.1 |
(tr|I1M0S2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G59980.2 |
236 |
56.8 |
70.9 |
| Symbols: | Polymerase/histidinol phosphatase-like | chr5:24147207-24149783 FORWARD LENGTH=705 |
| Medicago |
Medtr2g096090.1 |
291 |
71.6 |
80.2 |
| polymerase/histidinol phosphatase-like protein, putative | HC | chr2:41023372-41018051 | 20130731 |
| Soybean |
Glyma13g26680.1 |
301 |
73.5 |
81.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0288639.1 |
length: 207 aa. |
| IPR002738 |
RNase P subunit p30 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004540 |
ribonuclease activity |
|
|
| Biological Process |
GO:0008033 |
tRNA processing |
|
|
| HMMPanther |
PTHR13031 |
RIBONUCLEASE |
2.7e-50 |
1-195 |
| HMMPfam |
PF01876 |
RNase_P_p30 |
3.5e-26 |
95-195 |
| IPR016195 |
Polymerase/histidinol phosphatase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF89550 |
PHP |
5.5e-20 |
1-189 |
| no_ID |
|
| Gene3D |
G3DSA:3.20.20.140 |
no description |
1.3e-30 |
89-195 |
| Seg |
seg |
seg |
NA |
57-70 |
- Wolf-PSORT
Lj0g3v0288639.1 chlo 4, cyto 3, mito 3, nucl 1, plas 1, extr 1, pero 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0288639.1 |
|