Miyakogusa Predicted Gene
- Lj0g3v0254869.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LFI2_MEDTR |
310 |
47.1 |
59.5 |
(tr|G7LFI2) F-box protein OS=Medicago truncatula GN=MTR_8g063440 PE=4 SV=1 |
| TAIR_pep |
AT1G48060.1 |
58.2 |
26.3 |
44.4 |
| Symbols: | F-box and associated interaction domains-containing protein | chr1:17728295-17729448 FORWARD LENGTH=353 |
| Medicago |
Medtr8g063440.1 |
310 |
47.1 |
59.5 |
| F-box protein interaction domain protein | HC | chr8:26606178-26607478 | 20130731 |
| Soybean |
Glyma03g35240.1 |
163 |
43.3 |
54.8 |
|
| LJGI |
gnl|LJGI|GO010439 |
1106 |
99.6 |
99.6 |
similar to UniRef100_A2Q609 Cluster: Cyclin-like F-box; F-box protein interaction domain; n=1; Medicago truncatula|Rep: Cyclin-like F-box; F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (18%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0254869.1 |
length: 412 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
1.4e-06 |
254-376 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
8.1e-14 |
222-352 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
190-206 |
- Wolf-PSORT
Lj0g3v0254869.1 cyto 7.5, cyto_E.R. 4.5, nucl 2, pero 2, extr 1, cysk 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0254869.1 |
|