Miyakogusa Predicted Gene
- Lj0g3v0254869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0254869.1 tr|G7LEG2|G7LEG2_MEDTR S locus F-box protein d
OS=Medicago truncatula GN=MTR_8g036970 PE=4
SV=1,40,1e-18,F_box_assoc_1: F-box protein interaction domain,F-box
associated interaction domain; FBA_1,F-box ass,CUFF.16737.1
(1240 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO010439 similar to UniRef100_A2Q609 Cluster: Cyclin-li... 1106 0.0
gnl|LJGI|TC77125 weakly similar to UniRef100_A2Q228 Cluster: Cyc... 573 e-162
>gnl|LJGI|GO010439 similar to UniRef100_A2Q609 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (18%)
Length = 736
Score = 1106 bits (558), Expect = 0.0
Identities = 564/566 (99%)
Strand = Plus / Plus
Query: 1 atggcgattcctgatgatgtcgccttcacgattctgtcgaaactgcctctgaaatctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggcgattcctgatgatgtcgccttcacgattctgtcgaaactgcctctgaaatctctc 96
Query: 61 aagcgattcacactggttcacaaatcatgggttgatttacatgaaatcccttatttcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aagcgattcacactggttcacaaatcatgggttgatttacatgaaatcccttatttcatg 156
Query: 121 agcatgtttcgcagcaatttcttatccaaacatcaatcttattacgatgatacatctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 agcatgtttcgcagcaatttcttatccaaacatcaatcttattacgatgatacatctctc 216
Query: 181 cttgtcttacagcagcagccatcagatggcacccattgtcacggttcattgtttttgctt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 217 cttgtcttacagcagcagccatcagatggcacccattgtcccggttcattgtttttgctt 276
Query: 241 tctggtgacaattttgagaaaacagtcaaatcagattggcttccatatcaagaacatggc 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 277 tctggtgacaattttgagaaaacagtcagatcagattggcttccatatcaagaacatggc 336
Query: 301 agattccttagtgttttgggttcgggtattcatggcattctttgtctccatgaagcacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agattccttagtgttttgggttcgggtattcatggcattctttgtctccatgaagcacca 396
Query: 361 gattataagtatgtattgtggaacccagctactgaagaattcagagttactcctcccagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gattataagtatgtattgtggaacccagctactgaagaattcagagttactcctcccagc 456
Query: 421 cctagagagtctctaccttattgggaggcttatattaaacctcatggatttggttatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cctagagagtctctaccttattgggaggcttatattaaacctcatggatttggttatgat 516
Query: 481 cctattactgatgactttaaggtccttcggcatataactttttatccagattatgattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cctattactgatgactttaaggtccttcggcatataactttttatccagattatgattat 576
Query: 541 gggcaagatgaatatcattcgggagt 566
||||||||||||||||||||||||||
Sbjct: 577 gggcaagatgaatatcattcgggagt 602
Score = 133 bits (67), Expect = 3e-30
Identities = 74/75 (98%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 627 ctcagaccacttaccaagtcgaataccacaacccttctgggagatatatagcctaagaag 686
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 663 ctcagaccacttaccaagtcgaatac-acaacccttctgggagatatatagcctaagaag 721
Query: 687 caactcttggaggaa 701
|||||||||||||||
Sbjct: 722 caactcttggaggaa 736
>gnl|LJGI|TC77125 weakly similar to UniRef100_A2Q228 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (32%)
Length = 1362
Score = 573 bits (289), Expect = e-162
Identities = 459/518 (88%), Gaps = 12/518 (2%)
Strand = Plus / Plus
Query: 10 cctgatgatgtcgccttcacgattctgtcgaaactgcctctgaaatctctcaagcgattc 69
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2 cctgatgatgtcgccttcacgattctgtcgaaactgcctctgaaatccctcaagcgattc 61
Query: 70 acactggttcacaaatcatgggttgatttacatgaaatcccttatttcatgagcatgttt 129
|||||||||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 62 acactggttcacaaatcatgggctgatttactcgaaatccctcatttcatgagca----- 116
Query: 130 cgcagcaatttcttatccaaacatcaatcttattacgatgatacatctctccttgtctta 189
| ||| ||||||||||||| |||||| |||||||||||||| ||||| |||||
Sbjct: 117 -------aattcgtatccaaacatcactcttatcacgatgatacatctttccttctctta 169
Query: 190 cagcagcagccatcagatggcacccattgtcacggttcattgtttttgctttctggtgac 249
|||||||||||||||||| || ||||| |||||||||||||| | ||||||| ||||||
Sbjct: 170 cagcagcagccatcagatttcatccattatcacggttcattgtatctgctttcaggtgac 229
Query: 250 aattttgagaaaacagtcaaatcagattggcttccatatcaagaacatggcagattcctt 309
|| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 230 aaatttgagaaaacagtcaaatcagattcgcttccatatcaagagcatcgcagattcctt 289
Query: 310 agtgttttgggttcgggtattcatggcattctttgtctccatgaagcaccagattataag 369
|| |||| |||||| |||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 290 agggtttcgggttccggtattcatggcattcgttgtctccatgaagtaccagactataag 349
Query: 370 tatgtattgtggaacccagctactgaagaattcagagttactcctcccagccctagagag 429
|||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||
Sbjct: 350 tatgtattgtggaacccagctactaatgaattcagagttactcctcccagccctcgagag 409
Query: 430 tctctaccttattgggaggcttatattaaacctcatggatttggttatgatcctattact 489
||| ||||||||| || | | ||||| ||||||||||||||||||||| | ||||
Sbjct: 410 tctgtaccttattatgatccatgtattactactcatggatttggttatgatcatgttacc 469
Query: 490 gatgactttaaggtccttcggcatataactttttatcc 527
||||||||||||||| |||| |||||||| ||||||||
Sbjct: 470 gatgactttaaggtcattcgccatataacattttatcc 507
Score = 517 bits (261), Expect = e-146
Identities = 504/585 (86%), Gaps = 15/585 (2%)
Strand = Plus / Plus
Query: 653 cacaacccttctgggagatatatagcctaagaagcaactcttggaggaaacttgatgctg 712
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 636 cacagcccttctgggaaatatatagcctaagaagcaactcttggaggaaactggatactg 695
Query: 713 atatgcctattactggaggcggtcccgacaagggtggtgacacttacatgaatggagtgt 772
|||||||||||| ||| | ||| ||| | |||| ||||| ||||| ||| |||||||
Sbjct: 696 atatgcctattatcggaagtggttccggtatgggttatgacatttacacgaacggagtgt 755
Query: 773 gtaattggttgagttacggtcggatatatgactatggttttgatacacatttggtgtcat 832
|| |||||||| ||| | || | | |||||| || | | |||||| |||||
Sbjct: 756 gtcattggttgggtt---------tgaataagtgtggtttagaaatatatttggggtcat 806
Query: 833 tcaactttagcaatgagatattctacacaacgcccttaccgttagatctggctgatacaa 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tcaactttagcaatgagatattctacacaacgcccttaccgttagatctggctgatacag 866
Query: 893 gggtgcagacatacttggcggtgttaaatgagtccattgcgttgatatcaatgcatgaag 952
|| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 867 ggaagcagaactacttggcagtgttaaatgagtccattgcattgatatcaatacatgaag 926
Query: 953 aaacaacaacttttcacatatccattttgggtgaacaaggtgtgaaggaatcatggacta 1012
||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||
Sbjct: 927 aaacaacaacttttcacatatggattttgggtgagctctgtgcaaaggaatcatggacta 986
Query: 1013 aacttttcattgttggacttggacccttgcatgacgttgggcttcctattgcagtaggga 1072
||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 987 aacttttcactgttggacttggacccttgcatggctttgggcttcctattggagtaggga 1046
Query: 1073 agacgggtgaaatgatattctccagaagagaaaagggtgaactagccttgtttgatttaa 1132
||| ||| || ||||||| ||||| |||||| ||||||||||||||||| |||||||
Sbjct: 1047 agatgggcga---tatattcttcagaaaagaaaatggtgaactagccttgttcgatttaa 1103
Query: 1133 gtacccagatgctcaagaaggagattgctgctacagggctgttagattatgatcagatgg 1192
|||| || |||||| ||||||||||||||||||| | ||||||| |||||||||||
Sbjct: 1104 gtactcatatgctc---aaggagattgctgctacagaggtgttagagtatgatcagataa 1160
Query: 1193 taatttataaggaaagcattcttcccattgggagaacaggttatt 1237
|||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1161 taatctataaggaaagcattcttccgattggaagaacaggttatt 1205