Miyakogusa Predicted Gene

Lj0g3v0173949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9S078_RICCO 175 94.0 98.8 (tr|B9S078) Plant RNA cleavage stimulation factor, putative OS=Ricinus communis GN=RCOM_1299930 PE=4 SV=1
TAIR_pep AT1G17760.1 146 77.4 91.7 | Symbols: CSTF77, ATCSTF77 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:6110208-6116271 REVERSE LENGTH=734
Medicago Medtr6g026900.2 160 88.1 94.0 | cleavage stimulation factor | HC | chr6:9094104-9083521 | 20130731
Soybean Glyma19g14930.1 174 95.2 97.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0173949.1 length: 105 aa.
IPR003107 RNA-processing protein, HAT helix
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006396 RNA processing    
HMMSmart SM00386 HAT 3e-05 7-39
41-75
IPR008847 Suppressor of forked
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006397 mRNA processing    
HMMPfam PF05843 Suf 8.7e-31 1-84
no_ID  
HMMPanther PTHR19980 RNA 4.4e-36 1-90
Wolf-PSORT
Lj0g3v0173949.1	cyto 5.5, nucl 5, cyto_E.R. 3.5, plas 1, extr 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0173949.1