Miyakogusa Predicted Gene

Lj0g3v0124009.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 421 42.7 58.6 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 355 39.7 57.9 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 405 45.4 62.2 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 306 38.0 53.6  
LJGI gnl|LJGI|FS330439 1372 100.0 100.0 weakly similar to UniRef100_A7PSR1 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0124009.1 length: 509 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.013 42-71
271-299
394-423
HMMPfam PF12854 PPR_1 3.6e-06 104-136
139-168
HMMPfam PF13041 PPR_2 6.3e-14 185-232
HMMTigr TIGR00756 PPR: 0.00017 42-75
77-110
111-138
143-176
186-220
221-248
271-303
ProfileScan PS51375 PPR 6.950 39-73
74-108
109-139
141-175
184-218
219-249
268-302
391-425
356-390
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-66 5-445
HMMPanther PTHR24015:SF0 SUBFAMILY 1.2e-66 5-445
Wolf-PSORT
Lj0g3v0124009.1	chlo 8, mito 5.5, cyto_mito 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0124009.1