Miyakogusa Predicted Gene
- Lj0g3v0124009.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0124009.1 Non Chatacterized Hit- tr|D8RLC5|D8RLC5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,26.36,2e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAMI,CUFF.7449.1
(509 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 355 6e-98
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 7e-39
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 155 5e-38
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 9e-38
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 145 5e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 4e-34
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 140 3e-33
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 134 1e-31
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 3e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 3e-31
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 9e-31
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 7e-29
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 124 2e-28
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 119 6e-27
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 119 6e-27
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 8e-27
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 8e-26
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 4e-25
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 4e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 3e-22
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 102 7e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 101 1e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 4e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 5e-20
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 1e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 89 5e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 88 2e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 4e-17
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 81 2e-15
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 3e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 76 6e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 73 4e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 71 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 2e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 67 2e-11
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 63 4e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 6e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 59 9e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 59 9e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 3e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 3e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 3e-08
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 54 3e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 54 4e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 52 8e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 52 1e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 51 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 299/516 (57%), Gaps = 64/516 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ TYN +I +C +++++ G +LR MA KGL P+ +SY VI G C G+ E
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE---GRMKEVS 295
Query: 99 L---EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
EM+++G D TY++LI+ C + +A + EML P IT+T+L+H+
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPAL 185
C G ++A QM +G+ P+ T GFSP++
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TYNA+I+G C G++E+A+ +L M E GLSPD VSY V+SGFC++ ++ +A +K E
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 246 MDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQG 283
M K + D +TY+ L+QG DE TY +LINAYC +G
Sbjct: 476 MVEKGIKP-DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI 343
+L K L L +EM KG LPD V S+LINGL+K++RT++ K LL + + S+P+ +
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE---ESVPSDV 591
Query: 344 IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
Y TLIENCSN EFKSVV L+K F M+G++ EA + ++ML N+KPDG YN++I HC
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 404 RRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSE 463
R ++ KAY +Y EMV+ GF+ H +V+AL+ AL G NE + VI + LRSC L+++E
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
Query: 464 LHKVLNEIDTRKFPPIGATLLDVLAEIAMDGLLLDG 499
KVL EI+ R+ +LDVLAE+A DG L +G
Sbjct: 712 QAKVLVEINHREGNM--DVVLDVLAEMAKDGFLPNG 745
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 157/296 (53%), Gaps = 14/296 (4%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N + TYN +I HC+ ++E + +L M EKGLSPD +SY V++GFC +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A K EM +KGI PD TYSSLIQ C +RR EA L++EML PPD+ T+T L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++A C+EG+ KA +H++M+ KGVLPD V TY+ +I+GL R EA +L
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVV--------TYSVLINGLNKQSRTREAKRLL 578
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL-KVEMDRKVVWGLDEVTYAYLMQGLS 267
+ P V+Y +I C N E + L K + ++ D+V + L +
Sbjct: 579 LKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 268 DEDT-YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+ T Y +I+ +C G++ K TL EM G L +V L+ L K+ + +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 177/378 (46%), Gaps = 58/378 (15%)
Query: 105 GILPDAFTYSSLIQA-LCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSK 160
G +P +Y++++ A + SKR +S A ++F+EML P+ T+ L+ C G
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
A + +M KG LP+ VT YN +I G C L ++++ +LR M GL P+
Sbjct: 224 ALTLFDKMETKGCLPNVVT--------YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED---------- 270
+SY +VI+G C+ +++ + EM+R+ + LDEVTY L++G E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 271 ------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
TY SLI++ C G + + + D+M +G P+ + L++G +K
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE-NCSNNEFKSVVGLVKSFSMRGL----- 372
+ +L + D ++ P+ + Y+ LI +C + + + +++ +GL
Sbjct: 395 YMNEA-YRVLREMNDNGFS--PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 373 --------------VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
V+EA R M+E KPD Y+ LI C + +A ++Y EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 419 VRYGFVSHMFSVLALLTA 436
+R G F+ AL+ A
Sbjct: 512 LRVGLPPDEFTYTALINA 529
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++++ ++ F R C + D TY +I +C+ +EK + + M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS------------ 114
EKG+ PD ++Y +I G +A L++ + +P TY
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 115 ---SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
SLI+ C K ++EA +F+ ML PD + ++H C G+ KA+ ++ +M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 169 IHKGVLPDFVT 179
+ G L VT
Sbjct: 667 VKSGFLLHTVT 677
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 211/479 (44%), Gaps = 48/479 (10%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
V + + ++ + Y II C + ++ + M +G+ PD + Y +I
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---P 140
GFC A +F EM + I PD TY+++I C + EA LF EM P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D +TFT L++ C G AF +H+ MI G SP + TY +I GLC G
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--------SPNVVTYTTLIDGLCKEGD 471
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
++ A +L M ++GL P+ +Y +++G C++ + +A +L E + GL+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLN----- 523
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+D TY +L++AYC GE+ K + EM KG P V ++L+NG
Sbjct: 524 ------ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+D + L ++A + PN +++L++ C N K+ + K RG+
Sbjct: 578 EDGEKLLNWMLAKGI---APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV------- 627
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
PDG Y L+ HC+ N+ +A+ ++ EM GF + + L+
Sbjct: 628 ---------GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 440 HGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVLAEIAMDGLLLD 498
+ E V R D E+ ++ + P T++D + EI ++ L+D
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP--DTIVDPIDEI-IENYLVD 734
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+ A+ + R PE+G+ + SY IVI CQ +++A+ L + M+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME------------ 273
Query: 260 AYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
++G + D +Y++++N YC GEL KV L + M KG P+S I +I L +
Sbjct: 274 ---LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSV----------------- 360
+ + + +I + +P+ ++Y TLI+ C + ++
Sbjct: 331 KLAEAEEAFSEMIRQGI---LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 361 --VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
++ F G + EA + M +PD + LI +C+ ++ A+ ++ M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 419 VRYGFVSHMFSVLALLTALRDHG 441
++ G ++ + L+ L G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEG 470
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 211/479 (44%), Gaps = 48/479 (10%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
V + + ++ + Y II C + ++ + M +G+ PD + Y +I
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---P 140
GFC A +F EM + I PD TY+++I C + EA LF EM P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D +TFT L++ C G AF +H+ MI G SP + TY +I GLC G
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--------SPNVVTYTTLIDGLCKEGD 471
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
++ A +L M ++GL P+ +Y +++G C++ + +A +L E + GL+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLN----- 523
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+D TY +L++AYC GE+ K + EM KG P V ++L+NG
Sbjct: 524 ------ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+D + L ++A + PN +++L++ C N K+ + K RG+
Sbjct: 578 EDGEKLLNWMLAKGI---APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV------- 627
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
PDG Y L+ HC+ N+ +A+ ++ EM GF + + L+
Sbjct: 628 ---------GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 440 HGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVLAEIAMDGLLLD 498
+ E V R D E+ ++ + P T++D + EI ++ L+D
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP--DTIVDPIDEI-IENYLVD 734
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+ A+ + R PE+G+ + SY IVI CQ +++A+ L + M+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME------------ 273
Query: 260 AYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
++G + D +Y++++N YC GEL KV L + M KG P+S I +I L +
Sbjct: 274 ---LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSV----------------- 360
+ + + +I + +P+ ++Y TLI+ C + ++
Sbjct: 331 KLAEAEEAFSEMIRQGI---LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 361 --VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
++ F G + EA + M +PD + LI +C+ ++ A+ ++ M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 419 VRYGFVSHMFSVLALLTALRDHG 441
++ G ++ + L+ L G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEG 470
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 54/438 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY ++ C ++ + +L+ M + + D + Y +I CN + A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EMD KGI P+ TY+SLI+ LC+ R S+A L +M+ P+ +TF+ L+ A
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A ++ +MI + + PD +FTY+++I+G C R++EA + M
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
P+ V+Y +I GFC+ + + + EL EM ++ + G + VTY L+QGL
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCD 447
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D TY+ L++ C G+L K L + + + PD +++I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G+ K + +D L + + PN IIY T+I F +G
Sbjct: 508 EGMCKAGKVEDGWD---LFCSLSLKGVKPNVIIYTTMIS---------------GFCRKG 549
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
L EA M E P+ YN LI R + + + EM GFV ++
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 432 ALLTALRDHGMYNERSWV 449
++ L D + E+S++
Sbjct: 610 MVINMLHDGRL--EKSYL 625
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 185/418 (44%), Gaps = 59/418 (14%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ +NK++ M + + + + M +S D SY +I FC A
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G PD T SSL+ C +R+SEA L +M P+ +TF TL+H L
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ S+A + +M+ +G PD LFTY +++GLC G ++ AL +L+ M + +
Sbjct: 200 KASEAVALIDRMVARGCQPD--------LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------SDED 270
D V Y +I C + + A L EMD K + + VTY L++ L SD
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLIRCLCNYGRWSDAS 310
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
T+++LI+A+ +G+L + L DEM + PD S LING
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV 373
R + K L+I+ + PN + Y+TLI+ C + + L + S RGLV
Sbjct: 371 CMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 374 NEAARAHDTMLEGNYK--------------------PDGAVYNLLIFDHCRRLNVHKA 411
++T+++G ++ PD Y++L+ C+ + KA
Sbjct: 428 GNTV-TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 40/370 (10%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+++ I+ ++ TYN +I+ C R +L M E+ ++P+ +++ +I F
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + EM ++ I PD FTYSSLI C RL EA H+F+ M+S P+ +T+ TL
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C + + +M +G++ + V TYN +I GL G + A I
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTV--------TYNTLIQGLFQAGDCDMAQKIF 453
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ M G+ PD ++Y I++ G C+ +L KA V + YL + +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKAL----------------VVFEYLQKSKME 497
Query: 269 ED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
D TY +I C G++ L +S KG P+ +I + +I+G +K ++ A
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 327 LLLIIADYMYTSMPNYIIYDTLIE-NCSNNEFKSVVGLVKSFSMRGLVNEAARA------ 379
+ D ++PN Y+TLI + + + L+K G V +A+
Sbjct: 558 FREMKED---GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Query: 380 -HDTMLEGNY 388
HD LE +Y
Sbjct: 615 LHDGRLEKSY 624
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 45/371 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
+N ++ + C + + + ++ L P +S+ +I G+C + + K +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
++ PD FTYS+LI ALC + ++ A+ LF EM P+D+ FTTL+H GE
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+ +M+ KG+ PD V YN +++G C G + A I+ GM GL P
Sbjct: 362 DLMKESYQKMLSKGLQPDIV--------LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------------ 266
D ++Y +I GFC+ ++ A E++ EMD+ + LD V ++ L+ G+
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE-LDRVGFSALVCGMCKEGRVIDAERA 472
Query: 267 ----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
D+ TY +++A+C +G+ L EM G +P V ++L+NGL K
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE------NCSNNEF-KSVVGLVKSF-S 368
+ K+ +L+ A +P+ I Y+TL+E N S K +G+V S
Sbjct: 533 LGQMKNAD---MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLAS 589
Query: 369 MRGLVNEAARA 379
+ +VNE RA
Sbjct: 590 YKSIVNELDRA 600
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ +Q D+ YN ++ C + I+ GM +GL PD ++Y +I GFC
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
A E + EMDQ GI D +S+L+ +C + R+ +A +EML PDD+T+T +M
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C +G+ F + +M G +P V TYN +++GLC LG+++ A +L
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVV--------TYNVLLNGLCKLGQMKNADMLLD 544
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M +G+ PD ++Y ++ G ++ K Y K E+
Sbjct: 545 AMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 25/287 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ TY+ +I C +++ G+ M ++GL P+ + + +I G N E
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M KG+ PD Y++L+ C L A ++ M+ PD IT+TTL+ C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ A + +M G+ D V GFS A++ G+C GRV +A LR M
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRV-GFS-------ALVCGMCKEGRVIDAERALREMLR 478
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ PD V+Y +++ FC+ + + ++L EM + TY
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD--------------GHVPSVVTYN 524
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
L+N C G++ L D M + G +PD + + L+ G + A +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 145/350 (41%), Gaps = 45/350 (12%)
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
G + F +E+ G + + ++ L+ C + +S+A +F E+ P ++F TL
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ C G + F + HQM PD +FTY+A+I+ LC +++ A G+
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPD--------VFTYSALINALCKENKMDGAHGLF 333
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS- 267
M + GL P+ V + +I G +N E+ E +M L +GL
Sbjct: 334 DEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM---------------LSKGLQP 378
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
D Y +L+N +C G+L + D M +G PD + + LI+G R D + L
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF---CRGGDVETAL 435
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
I + +N + LV G V +A RA ML
Sbjct: 436 E---------------IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
KPD Y +++ C++ + + + EM G V + + LL L
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 34/278 (12%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF ++ +N +++ C G + +A + + + L P VS+ +I+G+C+ L +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ LK +M++ + D TY++LINA C + ++ L DEM +G
Sbjct: 295 FRLKHQMEKS--------------RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFK 358
+P+ VI + LI+G + K +++ + P+ ++Y+TL+ C N +
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL---QPDIVLYNTLVNGFCKNGDLV 397
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ +V RGL +PD Y LI CR +V A + EM
Sbjct: 398 AARNIVDGMIRRGL----------------RPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRS 456
+ G AL+ + G + ++ LR+
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ I+ D ++ ++ C RV LR M G+ PD ++Y ++ FC
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
++ EM G +P TY+ L+ LC ++ A L ML+ PDDIT+ TL
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
LEG H H K + G L +Y +I++ L
Sbjct: 562 -----LEG------HHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 207/462 (44%), Gaps = 51/462 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E D+ TYN +I C + V++ V +L M + SP+ ++Y +I+ C +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E + KGILPD T++SLIQ LC R A LF+EM S PD+ T+ L+
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ C +G+ +A +M QM ++G + ++ TYN +I G C + EA I
Sbjct: 444 SLCSKGKLDEALNMLKQM--------ELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M G+S ++V+Y +I G C++R + A +L MD+ ++ G D+
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL---MDQMIMEGQK-----------PDKY 541
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY SL+ +C G++ K + M+ G PD V LI+GL K R + + LL
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV-EVASKLLRS 600
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
I P+ Y+ +I+ GL + + EA MLE N P
Sbjct: 601 IQMKGINLTPH--AYNPVIQ-----------GLFR----KRKTTEAINLFREMLEQNEAP 643
Query: 391 DGAVYNLLIFDHCRRL-----NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
AV ++F R L + +A + +E++ GFV S+ L L M
Sbjct: 644 PDAVSYRIVF---RGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 446 RSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVL 487
++ ++ ++ E+ V + RKF ATL VL
Sbjct: 701 LVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVL 742
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 202/452 (44%), Gaps = 61/452 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ D++T+N +IK C ++ + +L M GL PD ++ V+ G+ A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHA 151
+ +M + G + + ++ C + R+ +A + QEM + PD TF TL++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G A + M+ + G+ P ++TYN++I GLC LG V+EA+ +L M
Sbjct: 305 LCKAGHVKHAIEIMDVMLQE--------GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----- 266
SP+ V+Y +IS C+ ++ +A EL + K + D T+ L+QGL
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTRN 415
Query: 267 -----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
DE TY LI++ C++G+L + L + +M G + +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 310 LINGLDKKARTKDTKAHLLLIIADYM--YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
LI+G K +T++ + I D M + N + Y+TLI+ GL KS
Sbjct: 476 LIDGFCKANKTREAEE-----IFDEMEVHGVSRNSVTYNTLID-----------GLCKSR 519
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
V +AA+ D M+ KPD YN L+ CR ++ KA ++ M G +
Sbjct: 520 R----VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 428 FSVLALLTALRDHGMYNERSWVIQNTLRSCNL 459
+ L++ L G R V LRS +
Sbjct: 576 VTYGTLISGLCKAG----RVEVASKLLRSIQM 603
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 11/237 (4%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + D TYN +I C ++++ + +L+ M G + ++Y +I GFC
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A E EM+ G+ ++ TY++LI LC RR+ +A L +M+ PD T+ +L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C G+ KA + M G PD V TY +I GLC GRVE A +LR
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIV--------TYGTLISGLCKAGRVEVASKLLR 599
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ G++ +Y VI G + R+ +A L EM + D V+Y + +GL
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 28/287 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I D+ T+N +I+ CL + + + M KG PD +Y +I C+
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A +M+ G TY++LI C + EA +F EM + +T+ TL+
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C A + QMI +G PD +TYN+++ C G +++A I++
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPD--------KYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY--LMQGLS 267
M G PD V+Y +ISG C+ + A +L + K G++ +AY ++QGL
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK---GINLTPHAYNPVIQGLF 621
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ IN LF+ + +E + PD+V ++ GL
Sbjct: 622 RKRKTTEAIN-------LFREMLEQNE-----APPDAVSYRIVFRGL 656
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 186/426 (43%), Gaps = 57/426 (13%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +I HC + G + M K L P ++Y ++ G+C+ KA EM
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
KGI P +T+++L+ L + +A LF EM P+ +T+ ++ C EG+ S
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
KAF +M KG++PD ++Y +IHGLC G+ EA + G+ + +
Sbjct: 560 KAFEFLKEMTEKGIVPD--------TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-------------- 265
+ Y ++ GFC+ +L +A + EM ++ V LD V Y L+ G
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGV-DLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 266 --------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
D+ Y S+I+A G+ + + D M ++G +P+ V + +INGL K
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE-------------FKSVVG-- 362
+ + +L +S+PN + Y ++ + E K ++
Sbjct: 731 GFVNEAE---VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 363 -----LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
L++ F +G + EA+ M+ PD Y +I + CRR +V KA ++
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 418 MVRYGF 423
M G
Sbjct: 848 MTEKGI 853
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 191/460 (41%), Gaps = 59/460 (12%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
L FRH G+ S I+ D+ Y +I+ C ++ + + ++ M G
Sbjct: 202 LVKFRHF---GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
+ + Y +I G C + +A K ++ K + PD TY +L+ LC +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+ EML P + ++L+ G+ +A ++ +++ DF G SP LF Y
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV------DF--GVSPNLFVY 370
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
NA+I LC + EA + M ++GL P+ V+Y I+I FC+ +L A EM
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM-- 428
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
V GL Y Y SLIN +C G++ EM +K P V +
Sbjct: 429 -VDTGLKLSVYPY-----------NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVG 362
L+ G K + A +Y M P+ + TL+ G
Sbjct: 477 SLMGGYCSKGKINK---------ALRLYHEMTGKGIAPSIYTFTTLLS-----------G 516
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L ++ GL+ +A + + M E N KP+ YN++I +C ++ KA+ EM G
Sbjct: 517 LFRA----GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 423 FVSHMFSVLALLTALRDHGMYNERSWVIQNTLR-SCNLND 461
V +S L+ L G +E + + +C LN+
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 81/345 (23%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+++ + TYN +I+ +C + K L+ M EKG+ PD SYR +I G C G+A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC---LTGQA 593
Query: 95 YEFKLEMD--QKGILP-DAFTYSSLIQALCSKRRLSEAYHLFQEMLS------------- 138
E K+ +D KG + Y+ L+ C + +L EA + QEM+
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 139 -------------------------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
PDD+ +T+++ A G+F +AF + MI++G
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+P+ VT Y A+I+GLC G V EA + M + P+ V+Y + +
Sbjct: 714 VPNEVT--------YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 234 R-ELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGL----------------------SD 268
+++KA VE+ ++ GL + TY L++G D
Sbjct: 766 EVDMQKA----VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY ++IN C + ++ K + L + M+ KG PD V + LI+G
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y ++ C ++E+ + + + M ++G+ D + Y +I G ++ + EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFS 159
+G+ PD Y+S+I A EA+ ++ M++ P+++T+T +++ C G +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 160 KAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAII 192
+A + +M +P+ VT G TYN +I
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
G C GR+EEA ++ M G+SPD ++Y +I+ C+ +++KA EL M K +
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 253 GLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
D Y +LI+ C GE+ K L +EM +G +P++
Sbjct: 855 --------------PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 35/257 (13%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
VC+ R + DL Y +I + + G+L+ M ++GL PD + Y +I
Sbjct: 634 VCQEMVQR---GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPP 140
+A+ M +G +P+ TY+++I LC ++EA L Q + S P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 141 DDITFTTLMHACCL-EGEFSKAFHMHHQMIHKGVLPDFVT-------------------- 179
+ +T+ + E + KA +H+ ++ KG+L + T
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 180 -------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
G SP TY +I+ LC V++A+ + M E G+ PD V+Y +I G C
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 233 NRELRKAYELKVEMDRK 249
E+ KA EL+ EM R+
Sbjct: 870 AGEMGKATELRNEMLRQ 886
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 43/264 (16%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + T +A++HGL A+ + M +G+ PD Y VI C+ ++L +A E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYC 280
M+ ++ V Y L+ GL D TY +L+ C
Sbjct: 250 IAHME-ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
E L + DEM P S L+ GL K+ + ++ +L+ + D+ + P
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA-LNLVKRVVDFGVS--P 365
Query: 341 NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
N +Y+ LI++ C +F +EA D M + +P+ Y++LI
Sbjct: 366 NLFVYNALIDSLCKGRKF----------------HEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGF 423
CRR + A + EMV G
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGL 433
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ + D TY +I + C V+K + + M EKG+ PD ++Y +I G C G
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 93 KAYEFKLEMDQKGILPDAFT 112
KA E + EM ++G++P+ T
Sbjct: 875 KATELRNEMLRQGLIPNNKT 894
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 184/426 (43%), Gaps = 61/426 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY +I C + + +L M + + D + Y VI C R A
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EMD KGI PD FTYSSLI LC+ R S+A L +ML P+ +TF +L+ A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A + +MI + + P+ V TYN++I+G C R++EA I M
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIV--------TYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDED 270
PD V+Y +I+GFC+ +++ EL +M R+ + G + VTY L+ G SD D
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG-NTVTYTTLIHGFFQASDCD 432
Query: 271 -------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
TY +L++ C G+L K + + + + PD +++
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G+ K + +D L + + P+ I Y+T+I F +G
Sbjct: 493 EGMCKAGKVEDGWD---LFCSLSLKGVKPDVIAYNTMIS---------------GFCKKG 534
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM---------VRYG 422
L EA M E PD YN LI H R + + + EM YG
Sbjct: 535 LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
Query: 423 FVSHMF 428
V+ M
Sbjct: 595 LVTDML 600
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 212/510 (41%), Gaps = 91/510 (17%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F+ L M + +V F + +L TYN +I C ++ + IL M
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P ++ ++ GFC+ +A +M + G PD T+++L+ L + S
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 128 EAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT----- 179
EA L + M+ PD +T+ +++ C GE A ++ ++M + D V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 180 ----------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
G P +FTY+++I LC GR +A +L M E ++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG------------ 265
P+ V++ +I F + +L +A +L EM ++ + + VTY L+ G
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 266 ----------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
L D TY +LIN +C ++ + L +MS +G + ++V + LI+G
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVN 374
+ + + + +++D ++ PN + Y+TL++ C N + + + +V + + +
Sbjct: 427 QASDCDNAQMVFKQMVSDGVH---PNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQKSKME 482
Query: 375 EAARAHDTMLEG--------------------NYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
++ M EG KPD YN +I C++ +AY +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 415 YMEMVRYGFVSHMFSVLALLTALRDHGMYN 444
+++M G L D G YN
Sbjct: 543 FIKMKEDG-------------PLPDSGTYN 559
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 25/253 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI ++ TYN +I C+ R+++ I M K PD ++Y +I GFC +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
E +M ++G++ + TY++LI A +F++M+S P+ +T+ TL+
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G+ KA + + + PD ++TYN + G+C G+VE+ + +
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPD--------IYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G+ PD ++Y +ISGFC+ +AY L ++M L D T
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED--------------GPLPDSGT 557
Query: 272 YASLINAYCAQGE 284
Y +LI A+ G+
Sbjct: 558 YNTLIRAHLRDGD 570
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D+ TYN + + C +VE G + ++ KG+ PD ++Y +I+GFC +AY
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
++M + G LPD+ TY++LI+A + + L +EM S
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + ++ TYN ++ C ++EK + + + + + PD +Y + G C
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
++ + KG+ PD Y+++I C K EAY LF +M PD T+ TL+
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 150 HACCLEGEFSKAFHMHHQM 168
A +G+ + + + +M
Sbjct: 563 RAHLRDGDKAASAELIKEM 581
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 188/430 (43%), Gaps = 53/430 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY ++ C ++ + +L+ M + + D + Y +I G C + A
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EMD KGI PD FTYSSLI LC+ R S+A L +M+ P+ +TF+ L+ A
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A ++ +MI + + PD +FTY+++I+G C R++EA + M
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDED 270
P+ V+Y +I GFC+ + + + EL EM ++ + G + VTY L+ G D D
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCD 450
Query: 271 -------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
TY L++ C G+L K + + + + PD +++I
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G+ K + +D L + PN I Y+T+I F +G
Sbjct: 511 EGMCKAGKVEDGWE---LFCNLSLKGVSPNVIAYNTMIS---------------GFCRKG 552
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
EA M E P+ YN LI R + + + EM GF S +
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-STI 611
Query: 432 ALLTALRDHG 441
L+T + G
Sbjct: 612 GLVTNMLHDG 621
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 182/407 (44%), Gaps = 42/407 (10%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ +NK++ M + E + + M G+S D +Y I FC A
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G PD T SSL+ C +R+S+A L +M+ PD TFTTL+H L
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ S+A + QM+ +G PD V TY +++GLC G ++ AL +L+ M + +
Sbjct: 203 KASEAVALVDQMVQRGCQPDLV--------TYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------SDED 270
D V Y +I G C+ + + A L EMD K + D TY+ L+ L SD
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYGRWSDAS 313
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
T+++LI+A+ +G+L + L DEM + PD S LING
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV 373
R + K L+I+ + PN + Y TLI+ C + + L + S RGLV
Sbjct: 374 CMHDRLDEAKHMFELMISKDCF---PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK---AYNMYME 417
+ T++ G ++ ++F + VH YN+ ++
Sbjct: 431 GNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 36/369 (9%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
++HM + + FT N + I+ D+ TY+ +I C R +L M E+ ++P+
Sbjct: 271 YKHM--DDALNLFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+++ +I F +A + EM ++ I PD FTYSSLI C RL EA H+F+
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
M+S P+ +T++TL+ C + + +M +G++ + V TY +
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV--------TYTTL 439
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
IHG + A + + M +G+ P+ ++Y I++ G C+N +L KA
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM----------- 488
Query: 252 WGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
V + YL + + D TY +I C G++ L +S KG P+ + +
Sbjct: 489 -----VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE-NCSNNEFKSVVGLVKSFS 368
+I+G +K ++ + L + D +PN Y+TLI + + ++ L+K
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKED---GPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 369 MRGLVNEAA 377
G +A+
Sbjct: 601 SCGFAGDAS 609
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 156/355 (43%), Gaps = 51/355 (14%)
Query: 122 SKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV-----LPD 176
+ +RL ++L Q + +PP +F L + C E F+ A + +++ + + D
Sbjct: 8 TAKRLFVHWNL-QGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDD 66
Query: 177 FVTGFS--------PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
V F P++ +N ++ + + + E + + M +G+S D +Y I I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
FC+ +L A + +M K+ + D VT + SL+N YC +
Sbjct: 127 CFCRRSQLSLALAVLAKM-MKLGYEPDIVTLS-------------SLLNGYCHSKRISDA 172
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYD 346
+ L D+M G PD+ + LI+GL KA + + D M P+ + Y
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGL-----FLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 347 TLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
T++ GL K RG ++ A M +G + D +YN +I C+
Sbjct: 228 TVVN-----------GLCK----RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL-RSCNLN 460
++ A N++ EM G +F+ +L++ L ++G +++ S ++ + + R N N
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 141/348 (40%), Gaps = 56/348 (16%)
Query: 125 RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
++ +A LF +M+ P + F L+ A +F + QM G+ D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD----- 117
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
L+TY+ I+ C ++ AL +L M ++G PD V+ +++G+C ++ + A
Sbjct: 118 ---LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 242 LKVEMDRKVVWGL--DEVTYAYLMQGL----------------------SDEDTYASLIN 277
L +D+ V G D T+ L+ GL D TY +++N
Sbjct: 175 L---VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
C +G++ L+L +M D VI + +I+GL K D A ++T
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD---------ALNLFT 282
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
M N I + S L+ G ++A+R M+E P+ ++
Sbjct: 283 EMDNKGIRPDVFTYSS---------LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
LI + + +A +Y EM++ +F+ +L+ H +E
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 190/430 (44%), Gaps = 53/430 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY ++ C ++ + +L+ M + + P + Y +I CN + A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EMD KGI P+ TY+SLI+ LC+ R S+A L +M+ P+ +TF+ L+ A
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A ++ +MI + + PD +FTY+++I+G C R++EA + M
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-------- 265
P+ V+Y +I GFC+ + + + EL EM ++ + G + VTY L+ G
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARECD 448
Query: 266 --------------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
L D TY+ L++ C G++ L + + + PD +++I
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G+ K + +D L + + PN + Y T++ F +G
Sbjct: 509 EGMCKAGKVEDGWD---LFCSLSLKGVKPNVVTYTTMMS---------------GFCRKG 550
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
L EA M E PD YN LI H R + + + EM FV S +
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STI 609
Query: 432 ALLTALRDHG 441
L+T + G
Sbjct: 610 GLVTNMLHDG 619
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 167/376 (44%), Gaps = 39/376 (10%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ ++K++ M + + + + M G+S + +Y +I FC A
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G PD T +SL+ C R+S+A L +M+ PD TF TL+H
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
S+A + +M+ KG PD V TY +++GLC G ++ AL +L+ M + +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLV--------TYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------SDED 270
P V Y +I C + + A L EMD K + + VTY L++ L SD
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLIRCLCNYGRWSDAS 311
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
T+++LI+A+ +G+L + L DEM + PD S LING
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV 373
R + K L+I+ + PN + Y+TLI+ C + L + S RGLV
Sbjct: 372 CMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 374 NEAARAHDTMLEGNYK 389
+ T++ G ++
Sbjct: 429 GNTV-TYTTLIHGFFQ 443
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/513 (21%), Positives = 206/513 (40%), Gaps = 71/513 (13%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F+ L M + +V + I +L TY+ +I C ++ + +L M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G PD ++ ++ GFC+ A +M + G PD+FT+++LI L R S
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 128 EAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT----- 179
EA L M+ PD +T+ +++ C G+ A + +M + P V
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 180 ----------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
G P + TYN++I LC GR +A +L M E ++
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------- 270
P+ V++ +I F + +L +A +L EM ++ + D TY+ L+ G D
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 271 ---------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
TY +LI +C + + + L EMS +G + ++V + LI+G
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
+ + + +++D + +P+ + Y L++ NN G V
Sbjct: 443 QARECDNAQIVFKQMVSDGV---LPDIMTYSILLDGLCNN---------------GKVET 484
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
A + + +PD YN++I C+ V ++++ + G ++ + +++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 436 ALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
G+ E + + L DS + L
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P++ ++ ++ + + + + + + M +G+S + +Y I+I+ FC+ +L A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+M K+ + D V T SL+N +C + ++L +M G P
Sbjct: 139 LAKM-MKLGYEPDIV-------------TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSV 360
DS + LI+GL + R + A + D M P+ + Y ++
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVA-----LVDRMVVKGCQPDLVTYGIVVN---------- 229
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
GL K RG ++ A M +G +P +YN +I C NV+ A N++ EM
Sbjct: 230 -GLCK----RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL-RSCNLN 460
G ++ + +L+ L ++G +++ S ++ + + R N N
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D+ TYN +I+ C +VE G + ++ KG+ P+ ++Y +++GFC +A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
EM ++G LPD+ TY++LI+A + + L +EM S
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 213/493 (43%), Gaps = 97/493 (19%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TYNK++ +C + VE+ + + E GL PD +Y +I G+C +
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 94 AYEFKLEMDQKG-----------------------------------ILPDAFTYSSLIQ 118
A++ EM KG P TY+ LI+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 119 ALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
+LC R SEA +L +EM P+ T+T L+ + C + +F KA + QM+ KG++P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ + TYNA+I+G C G +E+A+ ++ M LSP+ +Y +I G+C++
Sbjct: 392 NVI--------TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQG----------------------LSDEDTYA 273
+ L ++RKV+ D VTY L+ G + D+ TY
Sbjct: 444 HKAMGVLNKMLERKVLP--DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
S+I++ C + + L D + KG P+ V+ + LI+G K + + AHL+L +
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE--AHLML---E 556
Query: 334 YMYTS--MPNYIIYDTLIEN-CSNNEFKSV---------VGLVKSFSM----------RG 371
M + +PN + ++ LI C++ + K +GL + S G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
+ A ML KPD Y I +CR + A +M +M G +F+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 432 ALLTALRDHGMYN 444
+L+ D G N
Sbjct: 677 SLIKGYGDLGQTN 689
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 183/442 (41%), Gaps = 60/442 (13%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R + N + D TY +I C +RVE+ + + +KG++P+ + Y +I G+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
C +A+ +M K LP++ T+++LI LC+ +L EA L ++M+ P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T T L+H +G+F A+ QM+ G PD TY I C GR+
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD--------AHTYTTFIQTYCREGRLL 654
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+A ++ M E G+SPD +Y +I G+ + A+++ + R G + + +L
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV---LKRMRDTGCEPSQHTFL 711
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
L K L KGS P+ S ++ D
Sbjct: 712 ---------------------SLIKHLLEMKYGKQKGSEPELCAMSNMMEF--------D 742
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
T LL + ++ T PN Y+ LI +G+ + ++R V E H
Sbjct: 743 TVVELLEKMVEHSVT--PNAKSYEKLI-----------LGICEVGNLR--VAEKVFDHMQ 787
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
EG P V+N L+ C+ ++A + +M+ G + + S L+ L G
Sbjct: 788 RNEG-ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 443 YNERSWVIQNTLRSCNLNDSEL 464
+ V QN L+ C + EL
Sbjct: 847 KERGTSVFQNLLQ-CGYYEDEL 867
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 140/375 (37%), Gaps = 82/375 (21%)
Query: 77 SYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM 136
SY ++T NN G ++ +L M + D+ + + LC K E + L ++
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKYKL 181
Query: 137 LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
+ + TL+++ G + ++ +M+ V P+ ++TYN +++G C
Sbjct: 182 IIG----CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN--------IYTYNKMVNGYC 229
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
LG VEEA + + E GL PD
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFF----------------------------------- 254
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
TY SLI YC + +L + +EM KG + V + LI+GL
Sbjct: 255 --------------TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL-C 299
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
AR D L + + D P Y LI++ +E KS EA
Sbjct: 300 VARRIDEAMDLFVKMKDD--ECFPTVRTYTVLIKSLCGSERKS---------------EA 342
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
M E KP+ Y +LI C + KA + +M+ G + ++ + AL+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 437 LRDHGMYNERSWVIQ 451
GM + V++
Sbjct: 403 YCKRGMIEDAVDVVE 417
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 198/441 (44%), Gaps = 48/441 (10%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
+T +KTF R G R + I D+ YN +I +R+++ L M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
E GL P+A +Y I+G+ A ++ EM + G+LP+ + LI C K ++
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 128 EAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
EA ++ M+ D T+T LM+ + A + +M KG+ PD
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD-------- 626
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+F+Y +I+G LG +++A I M E GL+P+ + Y +++ GFC++ E+ KA EL
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL-- 684
Query: 245 EMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
LDE++ ++GL + TY ++I+ YC G+L + L DEM KG +PD
Sbjct: 685 ---------LDEMS----VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC--SNNEFKSVV 361
S + + L++G R D + + I+ T + C S F +++
Sbjct: 732 SFVYTTLVDGC---CRLNDVERAI---------------TIFGTNKKGCASSTAPFNALI 773
Query: 362 GLVKSFSMRGLVNEA-ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
V F L E R D + KP+ YN++I C+ N+ A ++ +M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 421 YGFVSHMFSVLALLTALRDHG 441
+ + + +LL G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMG 854
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 173/385 (44%), Gaps = 58/385 (15%)
Query: 51 CLMQR---VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGIL 107
C+M + +EK + GM GL P A +Y +I G+C + + YE +EM ++ I+
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHM 164
+TY ++++ +CS L AY++ +EM++ P+ + +TTL+ F A +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+M +G+ PD +F YN++I GL R++EA L M E GL P+A +Y
Sbjct: 475 LKEMKEQGIAPD--------IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGE 284
ISG+ + E A + EM V L ++ LIN YC +G+
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGV--------------LPNKVLCTGLINEYCKKGK 572
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM----- 339
+ + + M +G L D+ ++L+NGL K + D A+ ++ M
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD---------AEEIFREMRGKGI 623
Query: 340 -PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
P+ Y LI FS G + +A+ D M+E P+ +YN+L
Sbjct: 624 APDVFSYGVLI---------------NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGF 423
+ CR + KA + EM G
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 163/377 (43%), Gaps = 43/377 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D+ +Y +I + ++K I M E+GL+P+ + Y ++ GFC + K
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM KG+ P+A TY ++I C L+EA+ LF EM PD +TTL+
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
CC + +A + G + + +NA+I+ + G+ E +L
Sbjct: 741 GCCRLNDVERAIT---------IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 211 MPEMGL----SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ + P+ V+Y I+I C+ L A EL +M A LM +
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN-----------ANLMPTV 840
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
TY SL+N Y G ++ + DE G PD ++ S++IN K+ T TKA
Sbjct: 841 I---TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT--TKA- 894
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L++ D M+ +++ + L+ F+ G + A + + M+
Sbjct: 895 --LVLVDQMFAK--------NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 387 NYKPDGAVYNLLIFDHC 403
Y PD A LI + C
Sbjct: 945 QYIPDSATVIELINESC 961
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 176/446 (39%), Gaps = 78/446 (17%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFC--NNRCPGKAYEFKLE------------------- 100
+ +GM E+ + D +Y +I C N GK FK E
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M KG++P +TY LI LC +RL +A L EM S D+ T++ L+
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A + H+M+ G+ P + Y+ I + G +E+A + GM GL
Sbjct: 328 ADAAKGLVHEMVSHGI------NIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDED---- 270
P A +Y +I G+C+ + +R+ YEL VEM ++ + + TY +++G+ D D
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV-ISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 271 ---------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
Y +LI + + + EM +G PD + LI GL
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSV-------------- 360
K R + ++ L+ ++ + + PN Y I +EF S
Sbjct: 499 KAKRMDEARSFLVEMVENGL---KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 361 -----VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
GL+ + +G V EA A+ +M++ D Y +L+ + V A ++
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHG 441
EM G +FS L+ G
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLG 641
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 183/409 (44%), Gaps = 43/409 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+AT+N +I C EK +++ M + G +P ++Y V+ +C A
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
E M KG+ D TY+ LI LC R+++ Y L ++M + P+++T+ TL++
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
EG+ A + ++M+ G+ P+ V T+NA+I G G +EAL + M
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHV--------TFNALIDGHISEGNFKEALKMFYMME 400
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
GL+P VSY +++ G C+N E A + M R V + +TY ++ GL
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGL------ 453
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
C G L + + L +EMS G PD V S LING K R K K ++
Sbjct: 454 -------CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE---IVCR 503
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
Y PN IIY TLI NC G + EA R ++ M+ + D
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCR---------------MGCLKEAIRIYEAMILEGHTRDH 548
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+N+L+ C+ V +A M G + + S L+ + G
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 195/446 (43%), Gaps = 56/446 (12%)
Query: 26 RFTAA------RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
RF AA S+ + D+ TYN +I C R+ KG +LR M ++ + P+ ++Y
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP 139
+I GF N A + EM G+ P+ T+++LI S+ EA +F M +
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 140 ---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P ++++ L+ C EF A + +M GV + TY +I GLC
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI--------TYTGMIDGLC 454
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G ++EA+ +L M + G+ PD V+Y +I+GFC+ + A E+ + R
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-------- 506
Query: 257 VTYAYLMQGLSDED-TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
GLS Y++LI C G L + + + + M +G D ++L+ L
Sbjct: 507 -------VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN-------------------- 355
K + + + + + +D + +PN + +D LI N+
Sbjct: 560 KAGKVAEAEEFMRCMTSDGI---LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
F + L+K G + EA + ++ D +YN L+ C+ N+ KA +++
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHG 441
EMV+ + ++ +L++ L G
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 179/416 (43%), Gaps = 46/416 (11%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ + I D+ TY+ +I C + R + I+ + GLSP+ + Y +I C C
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A M +G D FT++ L+ +LC +++EA + M S P+ ++F L
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ GE KAF + +M G P FTY +++ GLC G + EA L
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTK--------VGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ + + + D V Y +++ C++ L KA L EM ++ + L D
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI--------------LPD 687
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGS-LPDSVIDSLLINGLDKKARTKDTKAHL 327
TY SLI+ C +G+ + E +G+ LP+ V+ + ++G+ K + K
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG---- 743
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNN-EFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
I + ++N + + + ++ +S G + + M
Sbjct: 744 ---------------IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
N P+ YN+L+ + +R +V ++ +Y ++ G + + +L+ + + M
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 182/423 (43%), Gaps = 46/423 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E +D T+N ++ C +V + +R M G+ P+ +S+ +I G+ N+ K
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMH 150
A+ EM + G P FTY SL++ LC L EA + + + P D + + TL+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C G +KA + +M+ + +LPD +TY ++I GLC G+ A+ +
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDS--------YTYTSLISGLCRKGKTVIAILFAKE 713
Query: 211 MPEMG-LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
G + P+ V Y + G + + + + +MD + D
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN--------------LGHTPDI 759
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
T ++I+ Y G++ K L EM ++ P+ ++L++G K+ KD LL
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR---KDVSTSFLL 816
Query: 330 IIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+ + +P+ + +L+ C +N + + ++K+F RG+
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV---------------- 860
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
+ D +N+LI C ++ A+++ M G + A+++ L + + E
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 449 VIQ 451
V+
Sbjct: 921 VLH 923
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 185/473 (39%), Gaps = 88/473 (18%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
+F + ++ D YN ++ C + K V + M ++ + PD+ +Y +I+G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 86 C------------------NNRCPGK------------------AYEFKLEMDQKGILPD 109
C N P K F+ +MD G PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 110 AFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHH 166
T +++I ++ + L EM + P+ T+ L+H + S +F ++
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
+I G+LPD +T S ++ G+C +E L IL+ G+ D ++ ++
Sbjct: 819 SIILNGILPDKLTCHS--------LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDE---------------------VTYAYLMQG 265
IS C N E+ A++L V++ + LD+ V + QG
Sbjct: 871 ISKCCANGEINWAFDL-VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 266 LSDED-TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
+S E Y LIN C G++ + +EM P +V +S ++ L K + +
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE-- 987
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
A LLL M +P + TL+ C N G V EA M
Sbjct: 988 ATLLLRFMLKMKL-VPTIASFTTLMHLCCKN---------------GNVIEALELRVVMS 1031
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
K D YN+LI C + ++ A+ +Y EM GF+++ + AL+ L
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 44/297 (14%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
R + + +R ++ NG++ D T + ++ C +E G+ IL+
Sbjct: 807 RKDVSTSFLLYRSIILNGIL-------------PDKLTCHSLVLGICESNMLEIGLKILK 853
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
+G+ D ++ +I+ C N A++ M GI D T +++ L
Sbjct: 854 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 913
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-- 179
R E+ + EM P+ + L++ C G+ AF + +MI + P V
Sbjct: 914 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 973
Query: 180 -------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
P + ++ ++H C G V EAL + M
Sbjct: 974 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 1033
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
GL D VSY ++I+G C ++ A+EL EM + TY L++GL +T
Sbjct: 1034 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA-NATTYKALIRGLLARET 1089
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 125/326 (38%), Gaps = 54/326 (16%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P T ++ + GE + +M+ + + PD T +N +I+ LC G
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT--------FNILINVLCAEG 247
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
E++ +++ M + G +P V+Y V+ +C+ + A EL M K V D TY
Sbjct: 248 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV-DADVCTY 306
Query: 260 AYLMQGL----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
L+ L +E TY +LIN + +G++ L +EM
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNE 356
G P+ V + LI+G + K+ ++ A + P+ + Y L++ C N E
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL---TPSEVSYGVLLDGLCKNAE 423
Query: 357 FK-------------------SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
F + G++ G ++EA + M + PD Y+
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGF 423
LI C+ A + + R G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGL 509
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 181/429 (42%), Gaps = 54/429 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q +L TY ++ C ++ +L M + D + + +I C R A
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM+ KGI P+ TYSSLI LCS R S+A L +M+ P+ +TF L+ A
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+F +A +H MI + + PD +FTYN++I+G C R+++A + M
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPD--------IFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
PD +Y +I GFC+++ + EL EM + + G D VTY L+QGL
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCD 377
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D TY+ L++ C G+L K L + D M D I + +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMR 370
G+ K + D L + + PN + Y+T+I CS + L+K
Sbjct: 438 EGMCKAGKVDDGWD---LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK---- 490
Query: 371 GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
M E PD YN LI H R + + + EM FV ++
Sbjct: 491 ------------MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Query: 431 LALLTALRD 439
+ L D
Sbjct: 539 GLVANMLHD 547
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 25/253 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI D+ TYN +I C+ R++K + M K PD +Y +I GFC ++
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
E EM +G++ D TY++LIQ L A +F++M+S PPD +T++ L+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G+ KA + M + D ++ Y +I G+C G+V++ + +
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLD--------IYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G+ P+ V+Y +ISG C R L++AY L +M L D T
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED--------------GPLPDSGT 502
Query: 272 YASLINAYCAQGE 284
Y +LI A+ G+
Sbjct: 503 YNTLIRAHLRDGD 515
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/513 (20%), Positives = 202/513 (39%), Gaps = 71/513 (13%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L M + +V I +L TYN +I C ++ + +L M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P ++ ++ G+C+ + A +M + G PD T+++LI L + S
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 128 EAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV------ 178
EA L M+ P+ +T+ +++ C G+ AF++ ++M + D V
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 179 ---------------------TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
G P + TY+++I LC GR +A +L M E ++
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG------------ 265
P+ V++ +I F + + +A +L +M ++ + D TY L+ G
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 266 ----------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
D DTY +LI +C + L EMSH+G + D+V + LI GL
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
+ + +++D + P+ + Y L++ NN G + +
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVP---PDIMTYSILLDGLCNN---------------GKLEK 413
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
A D M + K D +Y +I C+ V ++++ + G ++ + +++
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 436 ALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
L + E +++ L DS + L
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 149/320 (46%), Gaps = 28/320 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I+ ++ TY+ +I C R +L M EK ++P+ +++ +I F
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A + +M ++ I PD FTY+SLI C RL +A +F+ M+S PD T+ TL+
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C + +M H+G++ D V TY +I GL G + A + +
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTV--------TYTTLIQGLFHDGDCDNAQKVFK 384
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G+ PD ++Y I++ G C N +L KA E+ M + + LD Y +++G+
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI-KLDIYIYTTMIEGM--- 440
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
C G++ L +S KG P+ V + +I+GL K ++ A L
Sbjct: 441 ----------CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 330 IIADYMYTSMPNYIIYDTLI 349
+ D +P+ Y+TLI
Sbjct: 491 MKED---GPLPDSGTYNTLI 507
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 13 KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
K F+ MV +GV D+ TY+ ++ C ++EK + + M + +
Sbjct: 381 KVFKQMVSDGV-------------PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
D Y +I G C ++ + KG+ P+ TY+++I LCSKR L EAY L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQM 168
++M PD T+ TL+ A +G+ + + + +M
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P++F +N ++ + + + + + + M +G+S + +Y I+I+ FC+ ++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ + + G + T +SL+N YC + + L D+M G P
Sbjct: 68 ---LGKMMKLGYEPSIV-----------TLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSV 360
D++ + LI+GL KA + + D M PN + Y ++
Sbjct: 114 DTITFTTLIHGL-----FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN---------- 158
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
GL K RG ++ A + M + D ++N +I C+ +V A N++ EM
Sbjct: 159 -GLCK----RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
G ++ + +L++ L +G +++ S ++ + +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 182/429 (42%), Gaps = 54/429 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q +L TY ++ C + + +L M + D + + +I C R A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM+ KGI P+ TYSSLI LCS R S+A L +M+ P+ +TF L+ A
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+F +A ++ MI + + PD +FTYN++++G C R+++A + M
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPD--------IFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
PD V+Y +I GFC+++ + EL EM + + G D VTY L+QGL
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCD 452
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D TY+ L++ C G+L K L + D M D I + +I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMR 370
G+ K + D L + + PN + Y+T+I CS + L+K
Sbjct: 513 EGMCKAGKVDDGWD---LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK---- 565
Query: 371 GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
M E P+ YN LI H R + + + EM FV ++
Sbjct: 566 ------------MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Query: 431 LALLTALRD 439
+ L D
Sbjct: 614 GLVANMLHD 622
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 183/446 (41%), Gaps = 52/446 (11%)
Query: 7 SFTATLKTFRHMVRNGV--------VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEK 58
+F++ +R ++RNG+ + F S + + +NK++ M++ +
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPS-IVEFNKLLSAIAKMKKFDV 103
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
+ + M + +Y +I FC A +M + G P T SSL+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 119 ALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
C +R+S+A L +M+ PD ITFTTL+H L + S+A + +M+ +G P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ V TY +++GLC G + AL +L M + D V + +I C+ R
Sbjct: 224 NLV--------TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
+ A L EM+ K + + TY+SLI+ C+ G L +M
Sbjct: 276 VDDALNLFKEMETKGIR--------------PNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN 355
K P+ V + LI+ K+ + + + +YD +I+ +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEK------------------LYDDMIKRSIDP 363
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
+ + LV F M +++A + + M+ + PD YN LI C+ V ++
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHG 441
EM G V + L+ L G
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 25/253 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI D+ TYN ++ C+ R++K + M K PD ++Y +I GFC ++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
E EM +G++ D TY++LIQ L A +F++M+S PPD +T++ L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G+ KA + M + D ++ Y +I G+C G+V++ + +
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLD--------IYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G+ P+ V+Y +ISG C R L++AY L +M L + T
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED--------------GPLPNSGT 577
Query: 272 YASLINAYCAQGE 284
Y +LI A+ G+
Sbjct: 578 YNTLIRAHLRDGD 590
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 189/475 (39%), Gaps = 57/475 (12%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L M + VV I L TYN +I C ++ + +L M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P ++ ++ G+C+ + A +M + G PD T+++LI L + S
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 128 EAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
EA L M+ P+ +T+ +++ C G+ A ++ ++M + D V
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV------ 261
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+N II LC V++AL + + M G+ P+ V+Y +IS C A +L
Sbjct: 262 --IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYCAQ 282
+M K + + VT+ L+ E TY SL+N +C
Sbjct: 320 DMIEKKI-NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK------AHLLLIIADYMY 336
L K + + M K PD V + LI G K R +D +H L+ Y
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 337 TSMPNYIIYDTLIENCSNNE--FKSVVG-------LVKSFSMRGLVN-----EAARAHDT 382
T++ + +D +C N + FK +V + S + GL N +A D
Sbjct: 439 TTLIQGLFHDG---DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
M + K D +Y +I C+ V ++++ + G ++ + +++ L
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 13 KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
K F+ MV +GV D+ TY+ ++ C ++EK + + M + +
Sbjct: 456 KVFKQMVSDGV-------------PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
D Y +I G C ++ + KG+ P+ TY+++I LCSKR L EAY L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQM 168
++M P+ T+ TL+ A +G+ + + + +M
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P++ +N ++ + + + + + + M + + +Y I+I+ FC+ ++ A L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ + + G + T +SL+N YC + + L D+M G P
Sbjct: 143 ---LGKMMKLGYEPSIV-----------TLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSV 360
D++ + LI+GL KA + + D M PN + Y ++
Sbjct: 189 DTITFTTLIHGL-----FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN---------- 233
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
GL K RG + A + M + D ++N +I C+ +V A N++ EM
Sbjct: 234 -GLCK----RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
G ++ + +L++ L +G +++ S ++ + +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 200/482 (41%), Gaps = 94/482 (19%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
V F + + + D+ TYN +I + +E+ ++ M KG SP +Y VI
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---- 139
G C + +A E EM + G+ PD+ TY SL+ C K + E +F +M S
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 140 ----------------------------------PDDITFTTLMHACCLEGEFSKAFHMH 165
PD++ +T L+ C +G S A ++
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
++M+ +G D VT YN I+HGLC + EA + M E L PD+ + I
Sbjct: 434 NEMLQQGCAMDVVT--------YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG---LSDEDT----------- 271
+I G C+ L+ A EL +M K + LD VTY L+ G + D DT
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIR-LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 272 --------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
Y+ L+NA C++G L + + DEM K P +I + +I G + D
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE-FKSVVGLVK----------------- 365
++ L +I++ +P+ I Y+TLI E GLVK
Sbjct: 605 ESFLEKMISEGF---VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 366 ----SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
F + + EA M+E PD + Y +I + N+ +A+ ++ EM++
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 422 GF 423
GF
Sbjct: 722 GF 723
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 193/465 (41%), Gaps = 65/465 (13%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
FT R S+ + N +I + VE G+ + ++ G+ + + ++ C
Sbjct: 188 FTLLR-SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALC 246
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
+ K F ++ +KG+ PD TY++LI A SK + EA+ L M P
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS--------------------- 182
T+ T+++ C G++ +A + +M+ G+ PD T S
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 183 ------PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
P L +++++ G +++AL + E GL PD V Y I+I G+C+ +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEM 295
A L+ EM L QG + D TY ++++ C + L + L +EM
Sbjct: 427 SVAMNLRNEM---------------LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 296 SHKGSLPDSVIDSLLING----------LDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
+ + PDS ++LI+G ++ + K+ + L ++ + +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 346 DTLIENCSNNEFKSVVG-------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
DT E ++ K ++ LV + +G + EA R D M+ N KP + N +
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGM 442
I +CR N + +M+ GFV S L+ +R+ M
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 20 RNGVVCRFTAARNSESIQQ----DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDA 75
R G++ RN E +QQ D+ TYN I+ C + + + + M E+ L PD+
Sbjct: 422 RKGMISVAMNLRN-EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+ +I G C A E +M +K I D TY++L+ + A ++ +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
M+S P I+++ L++A C +G ++AF + +MI K + P + N++I
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI--------KPTVMICNSMI 592
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
G C G + L M G PD +SY +I GF + + KA+ L +M+ +
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE-QG 651
Query: 253 GL--DEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGELFKV 288
GL D TY ++ G D TY +IN + +Q L +
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 289 LTLDDEMSHKGSLPD 303
+ DEM +G PD
Sbjct: 712 FRIHDEMLQRGFSPD 726
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK--GLSPDALSYRYVITGFCNNRC 90
SE D +YN +I + + K G+++ M E+ GL PD +Y ++ GFC
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
+A +M ++G+ PD TY+ +I S+ L+EA+ + EML PDD
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 198/434 (45%), Gaps = 52/434 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ Q DL TY ++ C + +L M + L P L Y +I G C +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
A EM+ KGI P+ TYSSLI LC+ R S+A L +M+ PD TF+ L+
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A EG+ +A ++ +M+ + + P++ TY+++I+G C R++EA +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSI--------DPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M PD V+Y +I GFC+ + + + E+ EM ++ + G + VTY L+QGL
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQA 444
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
+ AQ E+FK EM G P+ + + L++GL K+ K +
Sbjct: 445 G------DCDMAQ-EIFK------EMVSDGVPPNIMTYNTLLDGL-----CKNGKLEKAM 486
Query: 330 IIADYMYTSM--PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
++ +Y+ S P Y+ +IE C + + L + S++G+
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV-------------- 532
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNE 445
KPD YN +I CR+ + +A ++ EM G + + L+ A LRD E
Sbjct: 533 --KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD--RE 588
Query: 446 RSWVIQNTLRSCNL 459
S + +RSC
Sbjct: 589 ASAELIKEMRSCGF 602
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 42/362 (11%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M GI + +TYS LI C + +L A + +M+ P+ +T ++L++ C
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
S+A + QM FVTG+ P T+N +IHGL + EA+ ++ M G
Sbjct: 166 RISEAVALVDQM--------FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
PD V+Y +V++G C+ + A+ L L+++ L G+ Y ++I
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNL-----------LNKMEQGKLEPGVL---IYNTII 263
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD--- 333
+ C + L L EM KG P+ V S LI+ L R D L +I
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 334 ---YMYTSMPNYII-----------YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+ ++++ + + YD +++ + + L+ F M ++EA +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
+ M+ + PD YN LI C+ V + ++ EM + G V + + L+ L
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 440 HG 441
G
Sbjct: 444 AG 445
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 192/441 (43%), Gaps = 78/441 (17%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q + TY ++ C + + +LR M E+ + DA+ Y +I G C + A+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM+ KGI + TY+ LI C+ R + L ++M+ P+ +TF+ L+ +
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALF 186
EG+ +A +H +MIH+G+ PD +T G P +
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
T+N +I+G C R+++ L + R M G+ D V+Y +I GFC+ +L A EL EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 247 -DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
RKV + VTY L+ GL C GE K L + +++ D
Sbjct: 465 VSRKVPPNI--VTYKILLDGL-------------CDNGESEKALEIFEKIEKSKMELDIG 509
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
I +++I+G+ ++ D A ++ S+P K V VK
Sbjct: 510 IYNIIIHGMCNASKVDD---------AWDLFCSLP----------------LKGVKPGVK 544
Query: 366 SFSM-------RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
++++ +G ++EA M E + PDG YN+LI H + K+ + E+
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 419 VRYGFVSHMFSVLALLTALRD 439
R GF ++ ++ L D
Sbjct: 605 KRCGFSVDASTIKMVIDMLSD 625
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 183/408 (44%), Gaps = 54/408 (13%)
Query: 60 VGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
+ + + M KG++ + + +I FC R A+ ++ + G P+ T+S+LI
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 120 LCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
LC + R+SEA L M+ PD IT TL++ CL G+ ++A + +M+ G P+
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
V TY +++ +C G+ A+ +LR M E + DAV Y I+I G C++ L
Sbjct: 228 AV--------TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYAS 274
A+ L EM+ K + + +TY L+ G + T++
Sbjct: 280 DNAFNLFNEMEMKGIT-TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI+++ +G+L + L EM H+G PD++ + LI+G K+ + L+++
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK- 397
Query: 335 MYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
PN ++ LI C N + L + S+RG+V D
Sbjct: 398 --GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV----------------ADTV 439
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
YN LI C ++ A ++ EMV ++ + LL L D+G
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 132/303 (43%), Gaps = 34/303 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I ++ TYN +I C R + G +LR M ++ ++P+ +++ +I F +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM +GI PD TY+SLI C + L +A + M+S P+ TF L++
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + +M +GV+ D V TYN +I G C LG++ A + +
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTV--------TYNTLIQGFCELGKLNVAKELFQE 463
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + P+ V+Y I++ G C N E KA E+ E K LD Y ++ G+ +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEI-FEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 271 ----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
TY +I C +G L + L +M G PD +
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 309 LLI 311
+LI
Sbjct: 583 ILI 585
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
I D TY +I C ++K ++ M KG P+ ++ +I G+C
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
E +M +G++ D TY++LIQ C +L+ A LFQEM+S PP+ +T+ L+
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C GE KA + ++ + D + YN IIHG+C +V++A + +
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELD--------IGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
P G+ P +Y I+I G C+ L +A L +M +E +A D T
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM--------EEDGHA------PDGWT 580
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y LI A+ G+ K + L +E+ G D+ ++I+ L
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 12/239 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ ++ T+N +I +C R++ G+ + R M+ +G+ D ++Y +I GFC
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLM 149
A E EM + + P+ TY L+ LC +A +F+++ ++ + ++
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H C + A+ + + KGV P + TYN +I GLC G + EA + R
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGV--------KPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M E G +PD +Y I+I + + K+ +L E+ R + +D T ++ LSD
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR-CGFSVDASTIKMVIDMLSD 625
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 171/446 (38%), Gaps = 97/446 (21%)
Query: 125 RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-- 179
+ +A LF++M+ P I F+ L A ++ + QM KG+ + T
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 180 -------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G+ P T++ +I+GLC GRV EAL ++ M EM
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLS----- 267
G PD ++ +++G C + K E + +D+ V +G + VTY ++ +
Sbjct: 188 GHKPDLITINTLVNGLCLS---GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 268 -----------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
D Y+ +I+ C G L L +EM KG + + ++L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMR 370
I G R D L +I + PN + + LI+ SF
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKIN---PNVVTFSVLID---------------SFVKE 346
Query: 371 GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM--F 428
G + EA H M+ PD Y LI C+ ++ KA M MV G ++ F
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 429 SVL--ALLTALR-DHGMYNERSW---------VIQNTLRS--CNLNDSELHKVL-NEIDT 473
++L A R D G+ R V NTL C L + K L E+ +
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 474 RKFPPIGATLLDVLAEIAMDGLLLDG 499
RK PP T +I +DGL +G
Sbjct: 467 RKVPPNIVTY-----KILLDGLCDNG 487
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 171/384 (44%), Gaps = 52/384 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ DL T+ ++ +C R+E + + + G P+ ++Y +I C NR A E
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M G P+ TY++L+ LC R +A L ++M+ P+ ITFT L+ A
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ +A +++ MI V PD +FTY ++I+GLC G ++EA + M
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPD--------VFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
G P+ V Y +I GFC+++ + ++ EM +K V + +TY L+QG
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTVLIQGYCLVGRPD 380
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D TY L++ C G++ K L + + M + + V +++I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G+ K + +D + + M PN I Y T+I F RG
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGM---KPNVITYTTMIS---------------GFCRRG 482
Query: 372 LVNEAARAHDTMLEGNYKPDGAVY 395
L++EA M E + P+ +VY
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
S+ D+ TY +I C+ +++ + M G P+ + Y +I GFC ++
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
+ EM QKG++ + TY+ LIQ C R A +F +M S PPD T+ L+
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G+ KA + M + + + V TY II G+C LG+VE+A + +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIV--------TYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
G+ P+ ++Y +ISGFC+ + +A L +M
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ ++ T+ +I + ++ + + M + + PD +Y +I G C +A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ M++ G P+ Y++LI C +R+ + +F EM + IT+T L+
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL G A + +QM + PD + TYN ++ GLC G+VE+AL I M
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPD--------IRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ + + V+Y I+I G C+ ++ A++L + K G+ + TY
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK---GMK-----------PNVITY 471
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
++I+ +C +G + + +L +M G LP+ +
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 163/427 (38%), Gaps = 66/427 (15%)
Query: 77 SYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM 136
SYR ++ +N A + M LP ++ L+ + R LF++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 137 LS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
PP T +MH CL + +A +M+ GF P L T+ ++++
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMK--------LGFEPDLVTFTSLLN 161
Query: 194 GLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG 253
G C R+E+A+ + + MG P+ V+Y +I C+NR L A EL +M
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN---- 217
Query: 254 LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+ TY +L+ C G L +M + P+ + + LI+
Sbjct: 218 ----------GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
K + + K ++I +Y P+ Y +LI M GL+
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVY---PDVFTYGSLIN---------------GLCMYGLL 309
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLAL 433
+EA + M P+ +Y LI C+ V ++ EM + G V++ + L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 434 LTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVLAEIAMD 493
+ G R V Q +V N++ +R+ PP T + +D
Sbjct: 370 IQGYCLVG----RPDVAQ--------------EVFNQMSSRRAPPDIRTY-----NVLLD 406
Query: 494 GLLLDGR 500
GL +G+
Sbjct: 407 GLCCNGK 413
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
+K F M + GVV + TY +I+ +CL+ R + + M+ +
Sbjct: 348 MKIFYEMSQKGVV-------------ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
PD +Y ++ G C N KA M ++ + + TY+ +IQ +C ++ +A+
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
LF + S P+ IT+TT++ C G +A + +M G LP+
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 182/394 (46%), Gaps = 52/394 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ T + +I C RV + ++ M E G PD + Y +I G C A E
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
M++ G+ DA TY+SL+ LC R S+A L ++M+ P+ ITFT ++
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+FS+A ++ +M + V PD +FTYN++I+GLC GRV+EA +L M
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPD--------VFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G PD V+Y +I+GFC+++ + + +L EM ++ + G D +TY ++QG Y
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG-DTITYNTIIQG------YF 360
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
AQ E+F S S P+ S+L+ GL R + L++ +
Sbjct: 361 QAGRPDAAQ-EIF---------SRMDSRPNIRTYSILLYGLCMNWRVEKA-----LVLFE 405
Query: 334 YMYTSMPNYII--YDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
M S I Y+ +I C + L +S S +GL KP
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL----------------KP 449
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
D Y +I CR+ K+ +Y +M G +
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 8/233 (3%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+FTA + F + + + D+ TYN +I C+ RV++ +L M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
KG PD ++Y +I GFC ++ + + EM Q+G++ D TY+++IQ R
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 127 SEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
A +F M S P+ T++ L++ C+ KA + M + D
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT-------- 417
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TYN +IHG+C +G VE+A + R + GL PD VSY +ISGFC+ R+ K+
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 41/296 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D TYN ++ C R ++R M + + P+ +++ VI F +
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A + EM ++ + PD FTY+SLI LC R+ EA + M++ PD +T+ TL++
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT------GF------------------SPALF 186
C + + +M +G++ D +T G+ P +
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TY+ +++GLC RVE+AL + M + + D +Y IVI G C+ + A++L +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
K GL D +Y ++I+ +C + + K L +M G LP
Sbjct: 443 SCK---GLK-----------PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEG 156
+M Q LP +S ++ + + LF M D ++ +++ C
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
F A + +M+ G PD VT +++I+G C RV +A+ ++ M EMG
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVT--------VSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------SDED 270
PD V Y +I G C+ + A EL M+R V D VTY L+ GL SD
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA-DAVTYNSLVAGLCCSGRWSDAA 229
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
T+ ++I+ + +G+ + + L +EM+ + PD + LINGL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV 373
R + K L L++ +P+ + Y+TLI C + L + + RGLV
Sbjct: 290 CMHGRVDEAKQMLDLMVTK---GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 374 NEAARAHDTMLEGNY---KPDGA--------------VYNLLIFDHCRRLNVHKAYNMYM 416
+ ++T+++G + +PD A Y++L++ C V KA ++
Sbjct: 347 GDTI-TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 417 EM 418
M
Sbjct: 406 NM 407
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 191/404 (47%), Gaps = 44/404 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC-NNRCPGKA 94
I+ ++ T+N +I C +++K G L M G+ P ++Y ++ GF R G A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG-A 279
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCL 154
EM KG PD TY+ ++ +C++ R SE +E+ PD +++ L+ C
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSN 339
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G+ AF +M+ +G++P F +TYN +IHGL ++E A ++R + E
Sbjct: 340 NGDLEMAFAYRDEMVKQGMVPTF--------YTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G+ D+V+Y I+I+G+CQ+ + +KA+ L EM + G+ + TY S
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEM---MTDGIQPTQF-----------TYTS 437
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI C + + + L +++ KG PD V+ + L++G A +A LL D
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG--HCAIGNMDRAFSLLKEMDM 495
Query: 335 MYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
M + P+ + Y+ L+ C +F+ L+ RG+ KPD
Sbjct: 496 MSIN-PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI----------------KPDHI 538
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
YN LI + ++ + A+ + EM+ GF + + ALL L
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 151/302 (50%), Gaps = 40/302 (13%)
Query: 30 ARNSESIQQDLA----TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
A E ++Q + TYN +I + ++E ++R + EKG+ D+++Y +I G+
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
C + KA+ EM GI P FTY+SLI LC K + EA LF++++ PD
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+ TLM C G +AF + +M + PD V TYN ++ GLC G+ E
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV--------TYNCLMRGLCGEGKFE 519
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE--VTYA 260
EA ++ M G+ PD +SY +ISG+ + + + A+ ++ EM + G + +TY
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM---LSLGFNPTLLTYN 576
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD-----SVIDSLLINGLD 315
L++GLS +GEL + L EM +G +P+ SVI+++ + LD
Sbjct: 577 ALLKGLSKNQ-----------EGELAEELL--REMKSEGIVPNDSSFCSVIEAM--SNLD 621
Query: 316 KK 317
K
Sbjct: 622 AK 623
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 137/341 (40%), Gaps = 58/341 (17%)
Query: 122 SKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
S R L + L + L I F L+ CC +A + M KG F
Sbjct: 135 SIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKG--------F 186
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P T N I+ L L R+E A M M + + ++ I+I+ C+ +L+KA
Sbjct: 187 YPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKG 246
Query: 242 LKVEMDRKVVWGLDE--VTYAYLMQGLS----------------------DEDTYASLIN 277
M+ V+G+ VTY L+QG S D TY +++
Sbjct: 247 FLGIME---VFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
C +G +VL EM G +PDSV ++LI G + A+ ++ M
Sbjct: 304 WMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM-- 358
Query: 338 SMPNYIIYDTLIENC-SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
+P + Y+TLI N+ ++ L++ +G+V D YN
Sbjct: 359 -VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV----------------LDSVTYN 401
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+LI +C+ + KA+ ++ EM+ G F+ +L+ L
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 193/441 (43%), Gaps = 61/441 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I L T+ ++K C + ++ + +LR M + G P+++ Y+ +I
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A + EM G +PDA T++ +I LC R++EA + ML PDDIT+ LM
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 150 HACCLEGEFSKAFHMHHQ-----------MIH-----------KGVLPDFVT--GFSPAL 185
+ C G A + ++ +IH K VL D VT G P +
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TYN++I+G G V AL +L M G P+ SY I++ GFC+ ++ +AY + E
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
M GL T + LI+A+C + + + + + EM KG PD
Sbjct: 450 MSAD---GLKPNTVG-----------FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLIENCSNNEFKSVVGLV 364
+ LI+GL + K H L ++ D + + N + Y+TLI
Sbjct: 496 TFNSLISGLCEVDEIK----HALWLLRDMISEGVVANTVTYNTLI--------------- 536
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+F RG + EA + + M+ D YN LI CR V KA +++ +M+R G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 425 SHMFSVLALLTALRDHGMYNE 445
S L+ L GM E
Sbjct: 597 PSNISCNILINGLCRSGMVEE 617
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 161/371 (43%), Gaps = 45/371 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I D+ TYN +I + V + +L M KG P+ SY ++ GFC
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+AY EM G+ P+ ++ LI A C + R+ EA +F+EM PD TF +L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E A + MI +GV+ + V TYN +I+ G ++EA ++
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTV--------TYNTLINAFLRRGEIKEARKLVN 553
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G D ++Y +I G C+ E+ KA L +M L G +
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM---------------LRDGHAPS 598
Query: 270 DTYAS-LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
+ + LIN C G + + + EM +GS PD V + LINGL + R +D
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+ A+ + P+ + ++TL+ L K G V +A D +E +
Sbjct: 659 KLQAEGI---PPDTVTFNTLMS-----------WLCKG----GFVYDACLLLDEGIEDGF 700
Query: 389 KPDGAVYNLLI 399
P+ +++L+
Sbjct: 701 VPNHRTWSILL 711
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 35/272 (12%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+++ ++ + +N +I C R+ + V I R M KG PD ++ +I+G C
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTL 148
A +M +G++ + TY++LI A + + EA L EM+ SP D+IT+ +L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GF 181
+ C GE KA + +M+ G P ++ G
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
+P + T+N++I+GLC GR+E+ L + R + G+ PD V++ ++S C+ + Y+
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV---YD 687
Query: 242 LKVEMDRKVVWGL--DEVTYAYLMQGLSDEDT 271
+ +D + G + T++ L+Q + ++T
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 167/391 (42%), Gaps = 58/391 (14%)
Query: 91 PGKAYEFKLEM-DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFT 146
PG+ LEM + P +Y+ +++ L S A ++F +MLS PP TF
Sbjct: 162 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
+M A C E A + M G +P+ V Y +IH L RV EAL
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI--------YQTLIHSLSKCNRVNEALQ 273
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQ 264
+L M MG PDA ++ VI G C+ + +A ++ ++R ++ G D++TY YLM
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM---VNRMLIRGFAPDDITYGYLMN 330
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
GL I A +LF ++ P+ VI + LI+G R D K
Sbjct: 331 GLCK-------IGRVDAAKDLF----------YRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLI---------------------ENCSNNEFKSVVGL 363
A L ++ Y +P+ Y++LI + C N + + L
Sbjct: 374 AVLSDMVTSY--GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI-L 430
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
V F G ++EA + M KP+ +N LI C+ + +A ++ EM R G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 424 VSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
+++ +L++ L + W++++ +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 160/394 (40%), Gaps = 47/394 (11%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
P SY V+ + C A +M + I P FT+ +++A C+ + A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 133 FQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
++M P+ + + TL+H+ ++A + +M G +PD T+N
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE--------TFN 291
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I GLC R+ EA ++ M G +PD ++Y +++G C+ + A +L + +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP 351
Query: 250 VVWGLDEVTYAYLMQGLSDED------------------TYASLINAYCAQGELFKVLTL 291
+ + + + ++ G D+ TY SLI Y +G + L +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
+M +KG P+ ++L++G K + + L + AD + PN + + N
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL---KPNTVGF-----N 463
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
C L+ +F + EA M KPD +N LI C + A
Sbjct: 464 C----------LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 412 YNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ +M+ G V++ + L+ A G E
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 43/257 (16%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
++ FR M R G + D+ T+N +I C + ++ + +LR M +G+
Sbjct: 479 VEIFREMPRKGC-------------KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
+ ++Y +I F +A + EM +G D TY+SLI+ LC + +A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------- 179
LF++ML P +I+ L++ C G +A +M+ +G PD VT
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 180 ------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
G P T+N ++ LC G V +A +L E G P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 222 SYIIVISGFCQNRELRK 238
++ I++ L +
Sbjct: 706 TWSILLQSIIPQETLDR 722
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 47/395 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T ++ C RV V ++ M E G PD ++Y +I C + A++
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
F E+++KGI P+ TY++L+ LC+ R S+A L +M+ P+ IT++ L+ A
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ +A + +M+ + PD V TY+++I+GLC R++EA + M
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIV--------TYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G D VSY +I+GFC+ + + +L EM ++ GL +S+ TY
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR---GL-----------VSNTVTYN 369
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI + G++ K +M G PD ++L+ GL + L+I D
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA----LVIFED 425
Query: 334 YMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
M + + Y T+I C + + L S S++GL KPD
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL----------------KPD 469
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
Y ++ C + +H+ +Y +M + G + +
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 25/295 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ ++ TY ++ C R +L M +K ++P+ ++Y ++ F N +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM + I PD TYSSLI LC R+ EA +F M+S D +++ TL++
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + +M +G++ + V TYN +I G G V++A
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTV--------TYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M G+SPD +Y I++ G C N EL KA + +M ++ + LD VTY +++G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM-DLDIVTYTTVIRGM---- 445
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
C G++ + +L +S KG PD V + +++GL K + +A
Sbjct: 446 ---------CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++TA + + R R + + I ++ TY+ ++ +V + + M
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 67 AEKGLSPDALSYRYVITGFC-NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ PD ++Y +I G C ++R F L M KG L D +Y++LI C +R
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL-MVSKGCLADVVSYNTLINGFCKAKR 345
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ + LF+EM + +T+ TL+ G+ KA QM DF G S
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-------DFF-GIS 397
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P ++TYN ++ GLC G +E+AL I M + + D V+Y VI G C+ ++ +A+ L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 243 KVEMDRKVVWGL--DEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ K GL D VTY +M GL C +G L +V L +M +G
Sbjct: 458 FCSLSLK---GLKPDIVTYTTMMSGL-------------CTKGLLHEVEALYTKMKQEG 500
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ D+ +YN +I C +RVE G+ + R M+++GL + ++Y +I GF
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
KA EF +MD GI PD +TY+ L+ LC L +A +F++M D +T+TT++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C G+ +A+ + + KG+ PD V TY ++ GLC G + E +
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIV--------TYTTMMSGLCTKGLLHEVEALYT 494
Query: 210 GMPEMGL 216
M + GL
Sbjct: 495 KMKQEGL 501
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 164/370 (44%), Gaps = 55/370 (14%)
Query: 107 LPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDI-TFTTLMHACCLEGEFSKAFH 163
P ++ L+ A+ ++ L ++M L +D+ TF +++ C + S A
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ +M+ G PD VT ++++G C RV +A+ ++ M E+G PD V+Y
Sbjct: 142 ILGKMLKLGYEPDRVT--------IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------------- 270
+I C+ + + A++ E++RK + + VTY L+ GL +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 271 ---------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
TY++L++A+ G++ + L +EM PD V S LINGL R
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
+ L+++ + + + Y+TLI C + + L + S RGLV+ +
Sbjct: 313 EANQMFDLMVSK---GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV-TY 368
Query: 381 DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDH 440
+T+++G ++ +V KA + +M +G +++ LL L D+
Sbjct: 369 NTLIQGFFQAG---------------DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 441 GMYNERSWVI 450
G E++ VI
Sbjct: 414 GEL-EKALVI 422
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
++ LV F R V++A D M+E YKPD YN +I C+ V+ A++ + E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPP 478
R G ++ + AL+ +G+ N W S+ ++L+++ +K P
Sbjct: 217 ERKGIRPNVVTYTALV-----NGLCNSSRW-------------SDAARLLSDMIKKKITP 258
Query: 479 IGATLLDVLAEIAMDGLLLDGRK 501
T +L +G +L+ ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKE 281
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 188/410 (45%), Gaps = 52/410 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + T ++ C R ++ V ++ M G P+ + Y VI G C NR A E
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
M++KGI DA TY++LI L + R ++A L ++M+ P+ I FT L+
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG +A +++ +MI + V+P+ +FTYN++I+G C G + +A + M
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPN--------VFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTY 272
G PD V+Y +I+GFC+++ + +L EM TY QGL D TY
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-----------TY----QGLVGDAFTY 362
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LI+ YC G+L + + M G PD V ++L++ L + + L+++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA----LVMVE 418
Query: 333 DYMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
D + M + I Y+ +I+ C ++ K L +S + +G+ KP
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV----------------KP 462
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDH 440
D Y +I CR+ +A + M GF M S LRDH
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGF---MPSERIYDETLRDH 509
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 170/430 (39%), Gaps = 50/430 (11%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ + +++ M + + + + M G+S D S+ +I FC A
Sbjct: 79 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 138
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G P T SL+ C R EA L M P+ + + T+++ C
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ + A + + M KG+ D VT YN +I GL GR +A +LR M + +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVT--------YNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
P+ + + +I F + L +A L EM R+ V + + TY SLI
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV--------------VPNVFTYNSLI 296
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
N +C G L + D M KG PD V + LI G K R +D + + + Y
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG----MKLFCEMTY 352
Query: 337 TSM-PNYIIYDTLIE--------NCSNNEFKSVVG------------LVKSFSMRGLVNE 375
+ + Y+TLI N + F +V L+ G + +
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
A + + + D YN++I CR + +A+ ++ + R G + + +++
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 436 ALRDHGMYNE 445
L G+ E
Sbjct: 473 GLCRKGLQRE 482
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 159/385 (41%), Gaps = 73/385 (18%)
Query: 125 RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-- 179
+ +A+ LF EML P + FT ++ +F +++H+M + G+ D +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 180 -------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
GF P++ T ++++G C R +EA+ ++ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA- 273
G P+ V Y VI+G C+NR+L A E+ M++K + D VTY L+ GLS+ +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA-DAVTYNTLISGLSNSGRWTD 237
Query: 274 ---------------------SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
+LI+ + +G L + L EM + +P+ + LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG 371
G D K L+++ + P+ + Y+TLI C + + + L + +G
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCF---PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
LV D YN LI +C+ ++ A ++ MV G + +
Sbjct: 355 LVG----------------DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 432 ALLTALRDHGMYNERSWVIQNTLRS 456
LL L ++G + ++++ +S
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKS 423
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 218/499 (43%), Gaps = 54/499 (10%)
Query: 9 TATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE 68
T+ F R RF I ++ TYN +I+ +C + RVE+ + +L M
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340
Query: 69 KGLSPDALSYRYVITGF-CNNRCPGKAYEFKLEMDQK-GILPDAFTYSSLIQALCSKRRL 126
KG PD +SY Y I G+ C + + + +M ++ G++PD TY++LI L
Sbjct: 341 KGCLPDKVSY-YTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 127 SEAYHLF---QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
EA QE D + ++ ++HA C EG S+A + ++M+ KG P P
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------P 452
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ TY A+++G C LG V++A +L+ M G P+ VSY +++G C+ + +A E+
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM- 511
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+ M + W + +TY+ +M GL E G+L + + EM KG P
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRRE-------------GKLSEACDVVREMVLKGFFPG 558
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG 362
V +LL+ L + RT + + + + ++ N+ T+I C N+E + +
Sbjct: 559 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT---TVIHGFCQNDELDAALS 615
Query: 363 -------------------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
LV + +G + EA ML P Y +I +C
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675
Query: 404 RRLNVHKAYNMYMEMVRYGFVSHMFS-VLALLTALRDHGMYNERSWVIQNTLRSCNLNDS 462
+ V + +M+ +++ V+ L L G E ++ LR+ + +D+
Sbjct: 676 QMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVL---GKLEEADTLLGKVLRTASRSDA 732
Query: 463 ELHKVLNEIDTRKFPPIGA 481
+ L E +K P+ A
Sbjct: 733 KTCYALMEGYLKKGVPLSA 751
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 164/387 (42%), Gaps = 47/387 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
+++++ + ++ + +L M G+ P+ L I F KA F M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
GI+P+ TY+ +I+ C R+ EA L ++M S PD +++ T+M C E
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 159 SKAFHMHHQMIHK-GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+ + +M + G++PD V TYN +IH L +EAL L+ E G
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQV--------TYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED--TYASL 275
D + Y ++ C+ + +A +L EM L +G D TY ++
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEM---------------LSKGHCPPDVVTYTAV 460
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
+N +C GE+ K L M G P++V + L+NG+ + K +A ++ +++
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG--KSLEAREMMNMSEEH 518
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+ S PN I Y ++ GL + G ++EA M+ + P
Sbjct: 519 WWS-PNSITYSVIMH-----------GLRRE----GKLSEACDVVREMVLKGFFPGPVEI 562
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYG 422
NLL+ CR H+A E + G
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKG 589
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 44 NKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ 103
N +++ C R + + KG + + +++ VI GFC N A +M
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSK 160
D FTY++L+ L K R++EA L ++ML P +T+ T++H C G+
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
+ +MI + YN +I LC LG++EEA +L + DA
Sbjct: 683 LVAILEKMISR----------QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDA 732
Query: 221 VSYIIVISGFCQNRELRKAYELKVEM 246
+ ++ G+ + AY++ M
Sbjct: 733 KTCYALMEGYLKKGVPLSAYKVACRM 758
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 170/370 (45%), Gaps = 44/370 (11%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
+SP+ LS+ VI C R +A E M ++ LPD +TY +L+ LC + R+ EA
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 131 HLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
L EM S P + + L+ C +G+ ++ + M KG +P+ V T
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV--------T 294
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YN +IHGLC G++++A+ +L M P+ V+Y +I+G + R A L M+
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
+ + L++ Y+ L+ GL E G+ + ++L +M+ KG P+ V+
Sbjct: 355 ER-GYHLNQHIYSVLISGLFKE-------------GKAEEAMSLWRKMAEKGCKPNIVVY 400
Query: 308 SLLINGLDKKARTKDTKAHLLLIIAD------YMYTSMPNYIIYDTLIE----------- 350
S+L++GL ++ + + K L +IA Y Y+S+ L E
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Query: 351 -NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
CS N+F V L+ G V EA ML KPD Y+ +I C ++
Sbjct: 461 TGCSRNKFCYSV-LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 410 KAYNMYMEMV 419
A +Y EM+
Sbjct: 520 AALKLYHEML 529
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 189/441 (42%), Gaps = 69/441 (15%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I + ++N +IK C ++ V++ + + RGM E+ PD +Y ++ G C +A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHA 151
EM +G P Y+ LI LC K L+ L M P+++T+ TL+H
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPA 184
CL+G+ KA + +M+ +P+ VT G+
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
Y+ +I GL G+ EEA+ + R M E G P+ V Y +++ G C+ + +A E+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI-- 419
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
++R + G L + TY+SL+ + G + + + EM G +
Sbjct: 420 -LNRMIASGC-----------LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVVG 362
S+LI+GL R K+ +++ M T P+ + Y ++I K + G
Sbjct: 468 FCYSVLIDGLCGVGRVKEA-----MMVWSKMLTIGIKPDTVAYSSII--------KGLCG 514
Query: 363 LVKSFSMRGLVNEAARAHDTML---EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ G ++ A + + ML E +PD YN+L+ C + ++ +A ++ M+
Sbjct: 515 I-------GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 420 RYGFVSHMFSVLALLTALRDH 440
G + + L L +
Sbjct: 568 DRGCDPDVITCNTFLNTLSEK 588
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 41/318 (12%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TYN +I CL +++K V +L M P+ ++Y +I G R A
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M+++G + YS LI L + + EA L+++M P+ + ++ L+ C EG+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 158 FSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNA 190
++A + ++MI G LP+ T G S F Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
+I GLC +GRV+EA+ + M +G+ PD V+Y +I G C + A +L EM
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM---- 528
Query: 251 VWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+ D TY L++ C Q ++ + + L + M +G PD + +
Sbjct: 529 -------LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 311 INGLDKKARTKDTKAHLL 328
+N L +K+ + D L
Sbjct: 582 LNTLSEKSNSCDKGRSFL 599
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 40/306 (13%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P+ ++F ++ A C +A + M + LPD +TY ++ GLC
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDG--------YTYCTLMDGLCKEE 236
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
R++EA+ +L M G SP V Y ++I G C+ +L + +L V
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL--------------VDN 282
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+L + +E TY +LI+ C +G+L K ++L + M +P+ V LINGL K+ R
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 320 TKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA 379
D LL + + Y N IY LI GL K G EA
Sbjct: 343 ATDA-VRLLSSMEERGYHL--NQHIYSVLIS-----------GLFK----EGKAEEAMSL 384
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
M E KP+ VY++L+ CR ++A + M+ G + + ++ +L+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 440 HGMYNE 445
G+ E
Sbjct: 445 TGLCEE 450
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY+ ++K E+ V + + M + G S + Y +I G C +A +M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML------SPPDDITFTTLMHACCLE 155
GI PD YSS+I+ LC + A L+ EML S PD +T+ L+ C++
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT--GFSPALF-TYNAIIHGLCFL----------GRVE 202
+ S+A + + M+ +G PD +T F L N+ G FL RV
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS 613
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
A I+ M L+P ++ +++ C+ +++ A +
Sbjct: 614 GACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 166/358 (46%), Gaps = 32/358 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + T+ ++ C RV + + M G P+ + Y +I G C ++ A +
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
M++ GI PD TY+SLI LCS R S+A + M PD TF L+ AC
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG S+A + +MI + + PD V TY+ +I+GLC R++EA + M
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIV--------TYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G PD V+Y I+I+G+C+++++ +L EM ++ V + + TY
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV--------------VRNTVTYT 365
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
LI YC G+L + M G P+ + ++L++GL + + L+I+AD
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA----LVILAD 421
Query: 334 YMYTSM-PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
M + + Y+ +I C E + S + +GL+ + + TM+ G YK
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW-TYTTMMLGLYK 478
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 38/316 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ ++ YN II C ++V+ + +L M + G+ PD ++Y +I+G C++ A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
M ++ I PD FT+++LI A + R+SEA ++EM+ PD +T++ L++ C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ +A M M+ KG PD VT Y+ +I+G C +VE + + M +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVT--------YSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDED- 270
G+ + V+Y I+I G+C+ +L A E+ R V G+ + +TY L+ GL D
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEI---FRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 271 ---------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
TY +I C GE+ + ++ +G +PD +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 310 LINGLDKKARTKDTKA 325
++ GL KK ++ A
Sbjct: 472 MMLGLYKKGLRREADA 487
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 35/265 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D+ TYN +I C R ++ M ++ + PD ++ +I +
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A EF EM ++ + PD TYS LI LC RL EA +F M+S PD +T++ L++
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
C + + +M +GV+ + VT G P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ TYN ++HGLC G++E+AL IL M + G+ D V+Y I+I G C+ E+ A+++
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 244 VEMDRKVVWGL--DEVTYAYLMQGL 266
++ + GL D TY +M GL
Sbjct: 455 CSLNCQ---GLMPDIWTYTTMMLGL 476
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
S+ D+ TY+ +I C+ R+++ + M KG PD ++Y +I G+C ++
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
+ EM Q+G++ + TY+ LIQ C +L+ A +F+ M+ P+ IT+ L+H
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G+ KA + M G+ D V TYN II G+C G V +A I
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIV--------TYNIIIRGMCKAGEVADAWDIYCS 456
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+ GL PD +Y ++ G + R+A
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 178/428 (41%), Gaps = 60/428 (14%)
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDI-TFTTLMHACCLE 155
M Q LP +S L+ A+ ++ +L+++M L P ++ T L++ C
Sbjct: 70 FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRC 129
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+ S A +MI G P++ T+ ++++G C RV +AL + M MG
Sbjct: 130 SQLSLALSFLGKMIK--------LGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-------- 267
P+ V Y +I G C+++++ A +L M++ + G D VTY L+ GL
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSGRWSDA 240
Query: 268 --------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
D T+ +LI+A +G + + +EM + PD V SLLI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL 372
L +R + + +++ + P+ + Y LI C + + + + L S RG+
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCF---PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLA 432
V Y +LI +CR ++ A ++ MV G ++ +
Sbjct: 358 VRNT----------------VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 433 LLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIG--ATLLDVLAEI 490
LL L D+G E++ VI ++ N + V I R G A D+ +
Sbjct: 402 LLHGLCDNGKI-EKALVILADMQK---NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 491 AMDGLLLD 498
GL+ D
Sbjct: 458 NCQGLMPD 465
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
+K F M + GVV RN+ TY +I+ +C ++ I R M G+
Sbjct: 346 MKLFCEMSQRGVV------RNT-------VTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
P+ ++Y ++ G C+N KA +M + G+ D TY+ +I+ +C +++A+
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 132 LFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
++ + PD T+TT+M +G +A + +M G+LP+
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 178/383 (46%), Gaps = 44/383 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ T+ +I CL R+E+ + ++ M E G+ PD + Y +I C N A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M+ GI PD Y+SL+ LC+ R +A L + M PD ITF L+ A
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+F A ++++MI + +P +FTY ++I+G C G V+EA + M
Sbjct: 259 KEGKFLDAEELYNEMIRMSI--------APNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------ 267
G PD V+Y +I+GFC+ +++ A ++ EM +K + G + +TY L+QG
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG-NTITYTTLIQGFGQVGKPN 369
Query: 268 ----------------DEDTYASLINAYCAQGELFKVLTLDDEMSHK---GSLPDSVIDS 308
+ TY L++ C G++ K L + ++M + G P+ +
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN--CSNNEFKSVVGLVKS 366
+L++GL + + L++ D M II T+I C + K+ V L S
Sbjct: 430 VLLHGLCYNGKLEKA----LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 367 FSMRGLVNEAARAHDTMLEGNYK 389
+G V + TM+ G ++
Sbjct: 486 LPSKG-VKPNVVTYTTMISGLFR 507
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 172/417 (41%), Gaps = 56/417 (13%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
F L F HMV +R SI N I K M++ + + + +
Sbjct: 52 QFNEALDLFTHMVE---------SRPLPSIIDFTKLLNVIAK----MKKFDVVINLCDHL 98
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G+S D + ++ FC + P A F +M + G PD T++SLI C R+
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
EA + +M+ PD + +TT++ + C G + A + QM + G+ PD V
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV----- 213
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
Y ++++GLC GR +A +LRGM + + PD +++ +I F + + A EL
Sbjct: 214 ---MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
EM R M + TY SLIN +C +G + + + M KG PD
Sbjct: 271 NEMIR--------------MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGL 363
V + LING K + D I Y+ + + N + L
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMK-----------------IFYEMSQKGLTGNTI-TYTTL 358
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
++ F G N A M+ P+ YN+L+ C V KA ++ +M +
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 9/238 (3%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI ++ TY +I C+ V++ + M KG PD ++Y +I GFC + A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
+ EM QKG+ + TY++LIQ + + A +F M+S PP+ T+ L+H
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G+ KA MI + + + G +P ++TYN ++HGLC+ G++E+AL + M
Sbjct: 397 LCYNGKVKKAL-----MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ + ++Y I+I G C+ +++ A L + K V + VTY ++ GL E
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV-KPNVVTYTTMISGLFRE 508
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 143/389 (36%), Gaps = 74/389 (19%)
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
GKA F +D + Y +++ + +EA LF M+ P I FT L
Sbjct: 19 GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKL 78
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GF 181
++ +F ++ + GV D T GF
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P + T+ ++I+G C R+EEA+ ++ M EMG+ PD V Y +I C+N + A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
L +M+ +G+ D Y SL+N C G +L M+ +
Sbjct: 199 LFDQMEN---YGIR-----------PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNN 355
PD + + LI+ K+ + D A+ +Y M PN Y +LI
Sbjct: 245 PDVITFNALIDAFVKEGKFLD---------AEELYNEMIRMSIAPNIFTYTSLIN----- 290
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
F M G V+EA + M PD Y LI C+ V A ++
Sbjct: 291 ----------GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHGMYN 444
EM + G + + L+ G N
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 33/212 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ Y +I C ++V+ + I M++KGL+ + ++Y +I GF P A E
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS------PPDDITFTTLMHAC 152
M +G+ P+ TY+ L+ LC ++ +A +F++M P+ T+ L+H
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 153 CLEGEFSKAFHMHHQMIHK-------------------GVLPDFVT--------GFSPAL 185
C G+ KA + M + G + + V G P +
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
TY +I GL G EA + R M E G+S
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 216/502 (43%), Gaps = 91/502 (18%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCRFTAARNSE---------SIQQDLATYNKIIKQHCL 52
K+L + L TF ++R V+C+ + E + +L TYN I+ C
Sbjct: 206 KMLASGVSLCLSTFNKLLR--VLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
++ V ++ + E+G PD ++Y +I G C N +A + +M +G+ PD++T
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
Y++LI C + A + + + PD T+ +L+ C EGE ++A + ++ +
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 170 HKGVLPDFV---------------------------TGFSPALFTYNAIIHGLCFLGRVE 202
KG+ P+ + G P + T+N +++GLC +G V
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY- 261
+A G+++ M G PD ++ I+I G+ ++ A E+ +D + G+D Y Y
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI---LDVMLDNGVDPDVYTYN 500
Query: 262 -LMQGLSDE-------DTYASLINAYCAQG---------------ELFKVLTLDDEMSHK 298
L+ GL +TY +++ CA +L + L L +EM +K
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY---TSMPNYIIYDTLIENCSNN 355
PD+V LI+G K A+ L + Y +S P Y I
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDG--AYTLFRKMEEAYKVSSSTPTYNI----------- 607
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
++ +F+ + V A + M++ PDG Y L++ C+ NV+ Y
Sbjct: 608 -------IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 416 MEMVRYGFVSHMFSVLALLTAL 437
+EM+ GF+ + ++ ++ L
Sbjct: 661 LEMMENGFIPSLTTLGRVINCL 682
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 176/430 (40%), Gaps = 56/430 (13%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
I D+ ++ +K C R + +L M+ +G + ++Y V+ GF +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
YE +M G+ T++ L++ LC K + E L +++ P+ T+ +
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C GE A M +I +G PD + TYN +I+GLC + +EA L M
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVI--------TYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDE 269
GL PD+ +Y +I+G+C+ ++ A + + V G D+ TY L+ GL E
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERI---VGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 270 DT----------------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
Y +LI QG + + L +EMS KG +P+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
++L+NGL K D + ++I+ + P+ ++ LI +
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYF---PDIFTFNILIH---------------GY 471
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
S + + A D ML+ PD YN L+ C+ Y MV G ++
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 428 FSVLALLTAL 437
F+ LL +L
Sbjct: 532 FTFNILLESL 541
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 28/349 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ I+ ++ YN +IK + + + M+EKGL P+ ++ ++ G C C
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
A M KG PD FT++ LI ++ ++ A + ML PD T+ +L+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C +F + M+ KG +P LFT+N ++ LC +++EALG+L
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGC--------APNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M ++PDAV++ +I GFC+N +L AY L +M+ AY + S
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE-----------AYKVS--SST 602
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +I+A+ + + L EM + PD L+++G K LL
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 330 IIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAA 377
++ + +P+ +I C + G++ +GLV EA
Sbjct: 663 MMENGF---IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 194/469 (41%), Gaps = 86/469 (18%)
Query: 7 SFTATLKTFRHMVRN-GVVCRFTAARN-----SESIQQDL--ATYNKIIKQHCLMQRVEK 58
F TL T+R ++ G +F A E++ + Y +K + +V++
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
V + M P SY +++ ++ +A++ + M +GI PD ++++ ++
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 119 ALCSKRR-----------------------------------LSEAYHLFQEMLSPPDDI 143
+ C R +E Y LF +ML+ +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 144 ---TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
TF L+ C +G+ + + ++I +GVLP+ LFTYN I GLC G
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN--------LFTYNLFIQGLCQRGE 266
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
++ A+ ++ + E G PD ++Y +I G C+N + ++A +V + + V GL+ +Y
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA---EVYLGKMVNEGLEPDSY- 322
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
TY +LI YC G + + + G +PD LI+GL
Sbjct: 323 ----------TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL---CHE 369
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
+T L L PN I+Y+TLI+ SN +G++ EAA+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSN---------------QGMILEAAQLA 414
Query: 381 DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
+ M E P+ +N+L+ C+ V A + M+ G+ +F+
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
F ++T++ MV G +L T+N +++ C +++++ +G+L M
Sbjct: 511 KFEDVMETYKTMVEKGCA-------------PNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQK-GILPDAFTYSSLIQALCSKRR 125
K ++PDA+++ +I GFC N AY +M++ + TY+ +I A K
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
++ A LFQEM+ PD T+ ++ C G + + +M+ GF
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME--------NGFI 669
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
P+L T +I+ LC RV EA GI+ M + GL P+AV+ I
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI 711
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
Y ++ K ++ EA ++F+ M P ++ +M G F +A ++ +M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+G+ PD ++++ + C R AL +L M G + V+Y V+
Sbjct: 138 RDRGITPD--------VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFK 287
GF + + YEL +M L G+S T+ L+ C +G++ +
Sbjct: 190 GFYEENFKAEGYELFGKM---------------LASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
L D++ +G LP+ +L I GL ++ + +I P+ I Y+
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ---GPKPDVITYNN 291
Query: 348 LIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
LI C N++F+ EA M+ +PD YN LI +C+
Sbjct: 292 LIYGLCKNSKFQ----------------EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYN 444
V A + + V GFV F+ +L+ L G N
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 170/376 (45%), Gaps = 39/376 (10%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ +NK++ M + E + + M G+S D +Y I FC A
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G PD T SSL+ C +R+S+A L +M+ PD TFTTL+H L
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ S+A + QM+ +G PD V TY +++GLC G ++ AL +L M +
Sbjct: 203 KASEAVALVDQMVQRGCQPDLV--------TYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------SDED 270
+ V + +I C+ R + A +L EM+ K + + VTY L+ L SD
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP-NVVTYNSLINCLCNYGRWSDAS 313
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
T+ +LI+A+ +G+L + L +EM + PD++ +LLING
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV 373
R + K +++ +PN Y+TLI C + V L + S RGLV
Sbjct: 374 CMHNRLDEAKQMFKFMVSK---DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 374 NEAARAHDTMLEGNYK 389
+ T+++G ++
Sbjct: 431 GNTV-TYTTIIQGFFQ 445
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 188/434 (43%), Gaps = 64/434 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY ++ C ++ + +L M + + + + +I C R A +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM+ KGI P+ TY+SLI LC+ R S+A L ML P+ +TF L+ A
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A +H +MI + + PD + TYN +I+G C R++EA + + M
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTI--------TYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
P+ +Y +I+GFC+ + + EL EM ++ + G + VTY ++QG
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG-NTVTYTTIIQGFFQAGDCD 450
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
+D TY+ L++ C+ G+L L + + + I + +I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSM---PNYIIYDTLIEN-CSNNEFKSVVGLVKSF 367
G+ K + + A ++ S+ P+ + Y+T+I CS
Sbjct: 511 EGMCKAGKVGE---------AWDLFCSLSIKPDVVTYNTMISGLCS-------------- 547
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
+ L+ EA M E P+ YN LI + R + + + EM GFV
Sbjct: 548 --KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 428 FSVLALLTALRDHG 441
S ++L+T + G
Sbjct: 606 -STISLVTNMLHDG 618
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I+ ++ TYN +I C R +L M EK ++P+ +++ +I F
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A + EM Q+ I PD TY+ LI C RL EA +F+ M+S P+ T+ TL+
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT------GFSPA------------------- 184
+ C + +M +G++ + VT GF A
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 185 --LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ TY+ ++HGLC G+++ AL I + + + + + Y +I G C+ ++ +A++L
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ K D TY ++I+ C++ L + L +M G+LP
Sbjct: 526 FCSLSIK-----------------PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 303 DS 304
+S
Sbjct: 569 NS 570
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 50/348 (14%)
Query: 122 SKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV-----LPD 176
+ +RL ++L Q + +PP +F L + C E F+ A + +++ + + D
Sbjct: 8 TAKRLFVHWNL-QGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDD 66
Query: 177 FVTGFS--------PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
V F P++ +N ++ + + + E + + M +G+S D +Y I I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
FC+ +L A + +M K+ + D V T +SL+N YC +
Sbjct: 127 CFCRRSQLSLALAVLAKM-MKLGYEPDIV-------------TLSSLLNGYCHSKRISDA 172
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYD 346
+ L D+M G PD+ + LI+GL KA + + D M P+ + Y
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGL-----FLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 347 TLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
T++ GL K RG ++ A + M K + ++N +I C+
Sbjct: 228 TVVN-----------GLCK----RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
+V A +++ EM G ++ + +L+ L ++G +++ S ++ N L
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 196/465 (42%), Gaps = 109/465 (23%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T+N +IK L +V + V ++ M E G PD ++Y ++ G C + A +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----------------- 139
+M+++ + D FTYS++I +LC + A LF+EM +
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 140 ---------------------PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
P+ ITF L+ EG+ +A ++ +MI +G+ P+ +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 179 T------GF---------------------SPALFTYNAIIHGLCFLGRVEEALGILRGM 211
T G+ SP + T+ ++I G C + RV++ + + R +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
+ GL +AV+Y I++ GFCQ+ +++ A EL EM V G+ L D T
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM---VSHGV-----------LPDVMT 440
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y L++ C G+L K L + +++ V+ + +I G+ K + +D
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED--------- 491
Query: 332 ADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE 385
A ++ S+ PN + Y +I GL K +G ++EA M E
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMIS-----------GLCK----KGSLSEANILLRKMEE 536
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
P+ YN LI H R ++ + + EM GF + S+
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 150/325 (46%), Gaps = 38/325 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I+ + TYN +++ C + G +L+ M + + P+ +++ ++ F
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A E EM +GI P+ TY++L+ C + RLSEA ++ M+ PD +TFT+L+
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C+ + + +G++ + V TY+ ++ G C G+++ A + +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAV--------TYSILVQGFCQSGKIKLAEELFQ 427
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL-----KVEMDRKVVWGLDEVTYAYLMQ 264
M G+ PD ++Y I++ G C N +L KA E+ K +MD +V
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM------------ 475
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
Y ++I C G++ L + KG P+ + +++I+GL KK +
Sbjct: 476 -------YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLI 349
L + D + PN Y+TLI
Sbjct: 529 ILLRKMEED---GNAPNDCTYNTLI 550
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 197/482 (40%), Gaps = 74/482 (15%)
Query: 3 LLRDSFTATLKTFR----HMVRNG-----VVCRFTA-----ARNSESIQQDLATYNKIIK 48
+++ S T +K R H+++ G ++C ++ R+ SI + + ++
Sbjct: 2 MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLR 61
Query: 49 QHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILP 108
+ + + + + + M P + + + + +F +++ GI
Sbjct: 62 SGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMH 165
+ +T + +I C + AY + +++ PD TF TL+ LEG+ S+A +
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+M+ G PD VT YN+I++G+C G AL +LR M E + D +Y
Sbjct: 182 DRMVENGCQPDVVT--------YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGEL 285
+I C++ + A L EM+ K + S TY SL+ C G+
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIK--------------SSVVTYNSLVRGLCKAGKW 279
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------ 339
L +M + +P+ + ++L++ K+ + ++ A+ +Y M
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE---------ANELYKEMITRGIS 330
Query: 340 PNYIIYDTLIEN-CSNNEFK-------------------SVVGLVKSFSMRGLVNEAARA 379
PN I Y+TL++ C N + L+K + M V++ +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
+ + + Y++L+ C+ + A ++ EMV +G + + + LL L D
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 440 HG 441
+G
Sbjct: 451 NG 452
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 185/442 (41%), Gaps = 43/442 (9%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S + L+ + M + G A ++ +N ++K C K V +LR M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
L PD SY VI GFC + KA E EM G T+ LI A C ++
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
EA +EM D + +T+L+ C GE + + +++ +G SP
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD--------SP 280
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
TYN +I G C LG+++EA I M E G+ P+ +Y +I G C + ++A +L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
M K DE A TY +IN C G + + + + M + + PD
Sbjct: 341 NLMIEK-----DEEPNAV---------TYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG 362
++ ++L+ GL K + L L++ D YT P+ I Y+ LI C N
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD-PDVISYNALIHGLCKENR------ 439
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+++A +D ++E D N+L+ + +V+KA ++ ++
Sbjct: 440 ----------LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 423 FVSHMFSVLALLTALRDHGMYN 444
V + + A++ GM N
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLN 511
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 45/361 (12%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
R M E + +S ++ + R G A+ M ++G + + ++ L++ LC
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+A L +EM PD ++ T++ C E KA + ++M KG +G
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM--KG------SG 207
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
S +L T+ +I C G+++EA+G L+ M MGL D V Y +I GFC EL +
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSD-EDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
L DEV L +G S TY +LI +C G+L + + + M +G
Sbjct: 268 AL-----------FDEV----LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
P+ + LI+GL +TK+ L L+I PN + Y+ +I +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK---DEEPNAVTYNIIINKLCKD---- 365
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
GLV +A + M + +PD YN+L+ C + ++ +A + M+
Sbjct: 366 -----------GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 420 R 420
+
Sbjct: 415 K 415
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 184/416 (44%), Gaps = 54/416 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TY I+ C M + + +L M E + PD + Y +I C + A
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM +KGI P+ FTY+ +I CS R S+A L ++M+ PD +TF L+ A E
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A + +M+H+ + PD V TYN++I+G C R ++A + M ++
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTV--------TYNSMIYGFCKHNRFDDA----KHMFDLM 427
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
SPD V++ +I +C+ + + + +L E+ R+ GL +++ TY +L
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR---GL-----------VANTTTYNTL 473
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ +C L L EM G PD++ ++L+ G + + ++ L L M
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA---LELFEVIQM 530
Query: 336 YTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG-------- 386
+ + Y+ +I C ++ L S + G V + ++ M+ G
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAIS 589
Query: 387 ------------NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
++PD + YN LI + + K+ + EM GF F++
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I ++ TYN +I C R +LR M E+ ++PD L++ +I+ GK
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE---GK 381
Query: 94 AYEFKL---EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH 150
+E + EM + I PD TY+S+I C R +A H+F ++++ PD +TF T++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMASPDVVTFNTIID 440
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + + ++ +G++ + TYN +IHG C + + A + +
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTT--------TYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---- 266
M G+ PD ++ I++ GFC+N +L +A EL E+ + LD V Y ++ G+
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALEL-FEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 267 ------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D TY +I+ +C + + L +M G PD+ +
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 309 LLING 313
LI G
Sbjct: 612 TLIRG 616
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 180/437 (41%), Gaps = 78/437 (17%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
+ F M R V I ++ ++N +IK C ++ + + + G
Sbjct: 113 IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
PD +++ ++ G C +A M + G L EA
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------EAVA 212
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
LF +M+ P ITF TL++ CLEG +A + ++M+ KG+ D V TY
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV--------TY 264
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
I++G+C +G + AL +L M E + PD V Y +I C++ A L EM
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 249 KVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGELF 286
K + + TY ++ G D T+ +LI+A +G+LF
Sbjct: 325 KGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYD 346
+ L DEM H+ PD+V + +I G K R D K H+ ++A P+ + ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK-HMFDLMAS------PDVVTFN 436
Query: 347 TLIE-NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
T+I+ C + L++ S RGLV + YN LI C
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLV----------------ANTTTYNTLIHGFCEV 480
Query: 406 LNVHKAYNMYMEMVRYG 422
N++ A +++ EM+ +G
Sbjct: 481 DNLNAAQDLFQEMISHG 497
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 16/177 (9%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
D+ A F+ M+ +GV D T N ++ C +++E+ + +
Sbjct: 481 DNLNAAQDLFQEMISHGVC-------------PDTITCNILLYGFCENEKLEEALELFEV 527
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ + D ++Y +I G C +A++ + G+ PD TY+ +I C K
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
+S+A LF +M PD+ T+ TL+ C GE K+ + +M G D T
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 103/283 (36%), Gaps = 52/283 (18%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF P + T+N ++HGLC R+ EAL + M E G
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF----------------------- 207
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
E D+ V GL V T+ +LIN C +G + + L ++M KG
Sbjct: 208 LEAVALFDQMVEIGLTPVVI-----------TFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
D V ++NG+ + DTK+ L L+ P+ +IY +I+ +
Sbjct: 257 LHIDVVTYGTIVNGM---CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD---- 309
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
G ++A MLE P+ YN +I C A + +M+
Sbjct: 310 -----------GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDS 462
+ + AL++A G E + L C D+
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 116/270 (42%), Gaps = 23/270 (8%)
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N +I + R + A+ + R M + + S+ I+I FC +L + ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-T 168
Query: 249 KVVWGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
K+ + D VT+ L+ GL ED + A + Y + + + L D+M G P +
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVK 365
+ LINGL + R + A + ++ ++ + + Y T++ C + KS + L+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV---VTYGTIVNGMCKMGDTKSALNLLS 285
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
M E + KPD +Y+ +I C+ + A ++ EM+ G
Sbjct: 286 K----------------MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 426 HMFSVLALLTALRDHGMYNERSWVIQNTLR 455
++F+ ++ G +++ ++++ +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 190/432 (43%), Gaps = 64/432 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q + TY ++ C + + +LR M E+ + DA+ Y +I G C + A+
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM+ KG D TY++LI C+ R + L ++M+ P+ +TF+ L+ +
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A + +M+ +G+ P+ + TYN++I G C R+EEA+ ++ M
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTI--------TYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G PD +++ I+I+G+C+ + EL EM + V + VTY L+QG
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQG-------- 447
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSV-----IDSLLINGLDKKART---KDTKA 325
+C G+L L EM + PD V +D L NG +KA K K+
Sbjct: 448 -----FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 326 HLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML- 384
+ L I YM II+ C+ ++ L S ++G V ARA++ M+
Sbjct: 503 KMELDIGIYM------IIIHGM----CNASKVDDAWDLFCSLPLKG-VKLDARAYNIMIS 551
Query: 385 -------------------EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
E + PD YN+LI H + A + EM GF +
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 426 HMFSVLALLTAL 437
+ +V ++ L
Sbjct: 612 DVSTVKMVINML 623
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 190/427 (44%), Gaps = 58/427 (13%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL--E 100
+N++ ++ E + + + M KG++ + +I FC RC +Y F +
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC--RCRKLSYAFSTMGK 148
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
+ + G PD +++L+ LC + R+SEA L M+ P IT TL++ CL G+
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
S A + +M+ TGF P TY +++ +C G+ A+ +LR M E +
Sbjct: 209 VSDAVVLIDRMVE--------TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------- 270
DAV Y I+I G C++ L A+ L EM+ K + D +TY L+ G +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 271 ---------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
T++ LI+++ +G+L + L EM +G P+++ + LI+G
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVN 374
K+ R ++ + L+I+ P+ + ++ LI C N + L + S+RG++
Sbjct: 380 KENRLEEAIQMVDLMISK---GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI- 435
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+ YN L+ C+ + A ++ EMV + S LL
Sbjct: 436 ---------------ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 435 TALRDHG 441
L D+G
Sbjct: 481 DGLCDNG 487
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + D+ TYN +I C R + G +LR M ++ +SP+ +++ +I F +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A + EM Q+GI P+ TY+SLI C + RL EA + M+S PD +TF L++
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + +M +GV+ + V TYN ++ G C G++E A + +
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTV--------TYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL--KVEMDRKVVWGLDEVTYAYLMQGLS- 267
M + PD VSY I++ G C N EL KA E+ K+E K LD Y ++ G+
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE---KSKMELDIGIYMIIIHGMCN 520
Query: 268 ---------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
D Y +I+ C + L K L +M+ +G PD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 307 DSLLI 311
++LI
Sbjct: 581 YNILI 585
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 45/383 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D +N ++ CL RV + + ++ M E G P ++ ++ G C N A
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
M + G P+ TY ++ +C + + A L ++M D + ++ ++ C
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G AF++ ++M + GF + TYN +I G C GR ++ +LR M +
Sbjct: 275 KDGSLDNAFNLFNEM--------EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTY 272
+SP+ V++ ++I F + +LR+A +L EM + +G++ + TY
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEM---------------MQRGIAPNTITY 371
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
SLI+ +C + L + + + D M KG PD + ++LING K R D L L
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD---GLELFRE 428
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ + N + Y+T LV+ F G + A + M+ +PD
Sbjct: 429 MSLRGVIANTVTYNT---------------LVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 393 AVYNLLIFDHCRRLNVHKAYNMY 415
Y +L+ C + KA ++
Sbjct: 474 VSYKILLDGLCDNGELEKALEIF 496
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I + TYN +I C R+E+ + ++ M KG PD +++ +I G+C
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
E EM +G++ + TY++L+Q C +L A LFQEM+S PD +++ L+
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C GE KA + ++ + D + Y IIHG+C +V++A + +P
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELD--------IGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDED- 270
G+ DA +Y I+IS C+ L KA L +M + DE+TY L++ L D+D
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE-GHAPDELTYNILIRAHLGDDDA 594
Query: 271 -TYASLINAYCAQGELFKVLTLD--DEMSHKGSLPDSVIDSL 309
T A LI + G V T+ M G L S +D L
Sbjct: 595 TTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ D+ T+N +I +C R++ G+ + R M+ +G+ + ++Y ++ GFC +
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLM 149
A + EM + + PD +Y L+ LC L +A +F ++ ++ + ++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H C + A+ + + KGV D YN +I LC + +A + R
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLD--------ARAYNIMISELCRKDSLSKADILFR 567
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M E G +PD ++Y I+I + + A EL EM
Sbjct: 568 KMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 185/434 (42%), Gaps = 62/434 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D TY ++ + C + + R M E+ + + Y VI C + A
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM+ KGI D TYSSLI LC+ + + + +EM+ PD +TF+ L+
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALF 186
EG+ +A ++++MI +G+ PD +T G P +
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TY+ +I+ C RV++ + + R + GL P+ ++Y ++ GFCQ+ +L A EL EM
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+ V VTY L+ GL C GEL K L + ++M I
Sbjct: 447 VSRGVPP-SVVTYGILLDGL-------------CDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
+++I+G+ ++ D + L ++D P+ + Y+ +I GL K
Sbjct: 493 YNIIIHGMCNASKVDDAWS-LFCSLSDKGVK--PDVVTYNVMIG-----------GLCK- 537
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
+G ++EA M E PD YN+LI H + + + EM GF +
Sbjct: 538 ---KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 427 MFSVLALLTALRDH 440
++ ++ L D
Sbjct: 595 SSTIKMVIDMLSDR 608
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 189/441 (42%), Gaps = 51/441 (11%)
Query: 23 VVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI 82
+V F I+ D+ T +I +C +++ +L + G PD +++ ++
Sbjct: 88 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 83 TGFCNNRCPGKAYEF---KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
GFC +A +EM Q+ PD T S+LI LC K R+SEA L M+
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
PD++T+ +++ C G + A + +M + + ++ Y+ +I LC
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI--------KASVVQYSIVIDSLC 256
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G ++AL + M G+ D V+Y +I G C + + ++ EM + +
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI----- 311
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+ D T+++LI+ + +G+L + L +EM +G PD++ + LI+G K
Sbjct: 312 ---------IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNE 375
+ + L+++ P+ + Y LI + C + L + S +GL+
Sbjct: 363 ENCLHEANQMFDLMVSK---GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-- 417
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
P+ YN L+ C+ ++ A ++ EMV G + + LL
Sbjct: 418 --------------PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 436 ALRDHGMYNERSWVIQNTLRS 456
L D+G N+ + + +S
Sbjct: 464 GLCDNGELNKALEIFEKMQKS 484
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 151/326 (46%), Gaps = 42/326 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY+ +I C + + G +LR M + + PD +++ +I F +
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM +GI PD TY+SLI C + L EA +F M+S PD +T++ L++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ C + ++ KG++P+ + TYN ++ G C G++ A + +
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTI--------TYNTLVLGFCQSGKLNAAKELFQE 445
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR-KVVWGLDEVTYAYLMQGLSDE 269
M G+ P V+Y I++ G C N EL KA E+ +M + ++ G+ Y ++ G+ +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG--IYNIIIHGMCNA 503
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
+ +C+ +S KG PD V +++I GL KK +
Sbjct: 504 SKVDDAWSLFCS-------------LSDKGVKPDVVTYNVMIGGLCKKGSLSE------- 543
Query: 330 IIADYMYTSM------PNYIIYDTLI 349
AD ++ M P+ Y+ LI
Sbjct: 544 --ADMLFRKMKEDGCTPDDFTYNILI 567
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 208/487 (42%), Gaps = 74/487 (15%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI + +Y + ++ + +V + + M + P + + + + +
Sbjct: 30 SITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLV 89
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
F M+ GI D +T + +I C K++L A+ + PD ITF+TL++
Sbjct: 90 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
CLEG S+A + +M+ PD VT + +I+GLC GRV EAL ++ M
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVT--------VSTLINGLCLKGRVSEALVLIDRM 201
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
E G PD V+Y V++ C++ A +L +M+ + + A ++Q
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI-------KASVVQ------- 247
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y+ +I++ C G L+L +EM KG D V S LI GL + D L +I
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
+ +P+ + + LI+ F G + EA ++ M+ PD
Sbjct: 308 GRNI---IPDVVTFSALID---------------VFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG----FVSHMFSVLALLTALR-DHGM--YN 444
YN LI C+ +H+A M+ MV G V++ + + A R D GM +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 445 ERS--WVIQNTL----------RSCNLNDSELHKVLNEIDTRKFPPIGATLLDVLAEIAM 492
E S +I NT+ +S LN ++ ++ E+ +R PP +
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAK--ELFQEMVSRGVPP----------SVVT 457
Query: 493 DGLLLDG 499
G+LLDG
Sbjct: 458 YGILLDG 464
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + D+ TY+ +I +C +RV+ G+ + R ++ KGL P+ ++Y ++ GFC +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLM 149
A E EM +G+ P TY L+ LC L++A +F++M + + ++
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H C + A+ + + KGV PD V TYN +I GLC G + EA + R
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVV--------TYNVMIGGLCKKGSLSEADMLFR 549
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M E G +PD +Y I+I L + EL EM + + D T ++ LSD
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM-KVCGFSADSSTIKMVIDMLSD 607
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + + TYN ++ C ++ + + M +G+ P ++Y ++ G C+N
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
KA E +M + + Y+ +I +C+ ++ +A+ LF + PD +T+ +
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C +G S+A + +M G PD FTYN +I + ++ ++
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDD--------FTYNILIRAHLGGSGLISSVELI 583
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
M G S D+ + +VI +R L K++
Sbjct: 584 EEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 614
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 184/416 (44%), Gaps = 54/416 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TY I+ C M + + +L M E + PD + Y +I C + A
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM +KGI P+ FTY+ +I CS R S+A L ++M+ PD +TF L+ A E
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A + +M+H+ + PD V TYN++I+G C R ++A + M ++
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTV--------TYNSMIYGFCKHNRFDDA----KHMFDLM 427
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
SPD V++ +I +C+ + + + +L E+ R+ GL +++ TY +L
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR---GL-----------VANTTTYNTL 473
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ +C L L EM G PD++ ++L+ G + + ++ L L M
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA---LELFEVIQM 530
Query: 336 YTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG-------- 386
+ + Y+ +I C ++ L S + G V + ++ M+ G
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAIS 589
Query: 387 ------------NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
++PD + YN LI + + K+ + EM GF F++
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I ++ TYN +I C R +LR M E+ ++PD L++ +I+ GK
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE---GK 381
Query: 94 AYEFKL---EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH 150
+E + EM + I PD TY+S+I C R +A H+F ++++ PD +TF T++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMASPDVVTFNTIID 440
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + + ++ +G++ + TYN +IHG C + + A + +
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTT--------TYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---- 266
M G+ PD ++ I++ GFC+N +L +A EL E+ + LD V Y ++ G+
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALEL-FEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 267 ------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D TY +I+ +C + + L +M G PD+ +
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 309 LLING 313
LI G
Sbjct: 612 TLIRG 616
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 183/450 (40%), Gaps = 78/450 (17%)
Query: 11 TLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG 70
+ F M R V I ++ ++N +IK C ++ + + + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
PD +++ ++ G C +A M + G L EA
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------EAV 211
Query: 131 HLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
LF +M+ P ITF TL++ CLEG +A + ++M+ KG+ D V T
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV--------T 263
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
Y I++G+C +G + AL +L M E + PD V Y +I C++ A L EM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 248 RKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGEL 285
K + + TY ++ G D T+ +LI+A +G+L
Sbjct: 324 EKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
F+ L DEM H+ PD+V + +I G K R D K H+ ++A P+ + +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK-HMFDLMAS------PDVVTF 435
Query: 346 DTLIE-NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+T+I+ C + L++ S RGLV + YN LI C
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLV----------------ANTTTYNTLIHGFCE 479
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
N++ A +++ EM+ +G + LL
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 16/177 (9%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
D+ A F+ M+ +GV D T N ++ C +++E+ + +
Sbjct: 481 DNLNAAQDLFQEMISHGVC-------------PDTITCNILLYGFCENEKLEEALELFEV 527
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ + D ++Y +I G C +A++ + G+ PD TY+ +I C K
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
+S+A LF +M PD+ T+ TL+ C GE K+ + +M G D T
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 103/283 (36%), Gaps = 52/283 (18%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF P + T+N ++HGLC R+ EAL + M E G
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF----------------------- 207
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
E D+ V GL V T+ +LIN C +G + + L ++M KG
Sbjct: 208 LEAVALFDQMVEIGLTPVVI-----------TFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
D V ++NG+ K DTK+ L L+ P+ +IY +I+ +
Sbjct: 257 LHIDVVTYGTIVNGMCKMG---DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD---- 309
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
G ++A MLE P+ YN +I C A + +M+
Sbjct: 310 -----------GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDS 462
+ + AL++A G E + L C D+
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 23/269 (8%)
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N +I + R + A+ + R M + + S+ I+I FC +L + ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-T 168
Query: 249 KVVWGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
K+ + D VT+ L+ GL ED + A + Y + + + L D+M G P +
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVK 365
+ LINGL + R + A + ++ ++ + + Y T++ C + KS + L+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV---VTYGTIVNGMCKMGDTKSALNLLS 285
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
M E + KPD +Y+ +I C+ + A ++ EM+ G
Sbjct: 286 K----------------MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 426 HMFSVLALLTALRDHGMYNERSWVIQNTL 454
++F+ ++ G +++ ++++ +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 167/382 (43%), Gaps = 52/382 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q +L TY ++ C ++ +L M + + + Y VI C R A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM+ KG+ P+ TYSSLI LC+ R S+A L +M+ P+ +TF L+ A
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A ++ +MI + + PD +FTY+++I+G C R++EA + M
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDED 270
P+ V+Y +I+GFC+ + + + EL EM ++ + G + VTY L+ G D D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG-NTVTYTTLIHGFFQARDCD 452
Query: 271 -------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
TY +L++ C G+L K + + + + P +++I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G+ K + +D L + + P+ IIY+T+I F +G
Sbjct: 513 EGMCKAGKVEDGWD---LFCSLSLKGVKPDVIIYNTMIS---------------GFCRKG 554
Query: 372 LVNEAARAHDTMLEGNYKPDGA 393
L EA M E PD
Sbjct: 555 LKEEADALFRKMREDGPLPDSG 576
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 183/413 (44%), Gaps = 56/413 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T+ +I L + + V ++ M ++G P+ ++Y V+ G C A+
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
+M+ I + YS++I +LC R +A +LF EM + P+ IT+++L+ C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+S A + MI + + P+ VT +NA+I G++ EA + M +
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVT--------FNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKA---YELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ PD +Y +I+GFC + L +A +EL + D +
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-----------------CFPNVV 401
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +LIN +C + + + L EMS +G + ++V + LI+G + + + +
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 331 IADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG--- 386
++D ++ PN + Y+TL++ C N + + + +V + R + ++ M+EG
Sbjct: 462 VSDGVH---PNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 387 -----------------NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
KPD +YN +I CR+ +A ++ +M G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 45/308 (14%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
FT N + ++ ++ TY+ +I C +R +L M E+ ++P+ +++ +I F
Sbjct: 283 FTEMEN-KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDI 143
+A + EM ++ I PD FTYSSLI C RL EA H+F+ M+S P+ +
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------------------ 179
T+ TL++ C + + +M +G++ + VT
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 180 ---GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
G P + TYN ++ GLC G++E+A+ + + + P +Y I+I G C+ ++
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMS 296
++L + K V D Y ++I+ +C +G + L +M
Sbjct: 522 EDGWDLFCSLSLKGVK--------------PDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 297 HKGSLPDS 304
G LPDS
Sbjct: 568 EDGPLPDS 575
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 132/321 (41%), Gaps = 54/321 (16%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P++F +N ++ + + + + + + M +G+S + +Y I+I+ FC+ ++ A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ + + G + T +SL+N YC + + L D+M G P
Sbjct: 143 ---LGKMMKLGYEPSIV-----------TLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSV 360
D++ + LI+GL KA + + D M PN + Y ++
Sbjct: 189 DTITFTTLIHGL-----FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN---------- 233
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
GL K RG ++ A + M + + +Y+ +I C+ + A N++ EM
Sbjct: 234 -GLCK----RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIG 480
G ++ + +L++ L N W S+ ++L+++ RK P
Sbjct: 289 KGVRPNVITYSSLISCL-----CNYERW-------------SDASRLLSDMIERKINPNV 330
Query: 481 ATLLDVLAEIAMDGLLLDGRK 501
T ++ +G L++ K
Sbjct: 331 VTFNALIDAFVKEGKLVEAEK 351
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 194/444 (43%), Gaps = 55/444 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
L T N ++ CL +V V ++ M E G P+ ++Y V+ C + A E
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M+++ I DA YS +I LC L A++LF EM D I +TTL+ C G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL--GRVEEALGILRGMPEM 214
+ + MI + + PD V ++A+I CF+ G++ EA + + M +
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVV--------AFSALID--CFVKEGKLREAEELHKEMIQR 346
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG--------- 265
G+SPD V+Y +I GFC+ +L KA + M K G + T+ L+ G
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC-GPNIRTFNILINGYCKANLIDD 405
Query: 266 -------------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV-----ID 307
++D TY +LI +C G+L L EM + PD V +D
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 308 SLLINGLDKKA-----RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
L NG +KA + + +K L + I + + M N D + + K V
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 363 LVKSFSM-------RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
VK++++ +G ++EA M E + P+G YN+LI H + K+ +
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 416 MEMVRYGFVSHMFSVLALLTALRD 439
E+ R GF +V ++ L D
Sbjct: 586 EEIKRCGFSVDASTVKMVVDMLSD 609
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 175/406 (43%), Gaps = 58/406 (14%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
+ M KG++ + + +I C R A+ ++ + G PD T+S+LI LC +
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
R+SEA L M+ P IT L++ CL G+ S A + +M+ TG
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE--------TG 207
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
F P TY ++ +C G+ A+ +LR M E + DAV Y I+I G C++ L A+
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINA 278
L EM+ K + D + Y L++G D +++LI+
Sbjct: 268 NLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
+ +G+L + L EM +G PD+V + LI+G K+ + D H+L D M +
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL-DKANHML----DLMVSK 381
Query: 339 --MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
PN ++ LI C N + L + S+RG+V D Y
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV----------------ADTVTY 425
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
N LI C + A ++ EMV + S LL L D+G
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 186/421 (44%), Gaps = 67/421 (15%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M+ KGI + +T S +I C R+LS A+ +++ PD +TF+TL++ CLEG
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
S+A + +M+ G P L T NA+++GLC G+V +A+ ++ M E G
Sbjct: 157 RVSEALELVDRMVE--------MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
P+ V+Y V+ C++ + A EL +M+ + + LD V Y+ ++ GL
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI-KLDAVKYSIIIDGL---------- 257
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
C G L L +EM KG D +I + LI G R D A LL +
Sbjct: 258 ---CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG-AKLLRDMIKRKI 313
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
T P+ + + LI+ F G + EA H M++ PD Y
Sbjct: 314 T--PDVVAFSALID---------------CFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-----LRDHGMYNERSW--- 448
LI C+ + KA +M MV G ++ + L+ L D G+ R
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 449 ------VIQNTLRS--CNLNDSELHKVL-NEIDTRKFPPIGATLLDVLA-EIAMDGLLLD 498
V NTL C L E+ K L E+ +R+ P D+++ +I +DGL +
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP------DIVSYKILLDGLCDN 470
Query: 499 G 499
G
Sbjct: 471 G 471
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 189/433 (43%), Gaps = 61/433 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T++ +I CL RV + + ++ M E G P ++ ++ G C N A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACC 153
M + G P+ TY +++ +C + + A L ++M D + ++ ++ C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G AF++ ++M + GF + Y +I G C+ GR ++ +LR M +
Sbjct: 259 KDGSLDNAFNLFNEM--------EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED--- 270
++PD V++ +I F + +LR+A EL EM ++ + D VTY L+ G E+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLD 369
Query: 271 -------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
T+ LIN YC + L L +MS +G + D+V + LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFS-- 368
G + + + K +++ + P+ + Y L++ C N E + + + +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVR---PDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 369 ------------MRGLVNEAARAHDTM-------LEGNYKPDGAVYNLLIFDHCRRLNVH 409
+ G+ N A++ D L+G KPD YN++I C++ ++
Sbjct: 487 KMELDIGIYNIIIHGMCN-ASKVDDAWDLFCSLPLKG-VKPDVKTYNIMIGGLCKKGSLS 544
Query: 410 KAYNMYMEMVRYG 422
+A ++ +M G
Sbjct: 545 EADLLFRKMEEDG 557
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 51/206 (24%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
L+ FR M GVV D TYN +I+ C + ++E + + M + +
Sbjct: 407 LELFRKMSLRGVV-------------ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEF-------KLEMD---------------------- 102
PD +SY+ ++ G C+N P KA E K+E+D
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 103 ------QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
KG+ PD TY+ +I LC K LSEA LF++M P+ T+ L+ A
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT 179
EG+ +K+ + ++ G D T
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDAST 599
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 34/310 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY ++ C + + +L M + + + Y VI C R A
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM+ KG+ P+ TYSSLI LC+ R S+A L +M+ P+ +TF+ L+ A
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G+ KA ++ +MI + + P +FTY+++I+G C L R+ EA +L M
Sbjct: 335 KKGKLVKAEKLYEEMIKRSI--------DPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDED 270
P+ V+Y +I+GFC+ + + K EL EM ++ + G + VTY L+ G D D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCD 445
Query: 271 -------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
TY L++ C G+L K + + + + PD +++I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 312 NGLDKKARTK 321
G+ K + K
Sbjct: 506 EGMCKAGKWK 515
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 177/418 (42%), Gaps = 35/418 (8%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F+ L M + +V F I +L TYN +I C R+ + +L M
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G PD ++ ++ GFC+ A +M + G PD T+++LI L + S
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 128 EAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
EA L M+ PD +T+ +++ C G+ A ++ ++M + + V
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV------ 254
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
Y+ +I LC ++AL + M G+ P+ ++Y +IS C A L
Sbjct: 255 --IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 245 EM-DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+M +RK+ L T+++LI+A+ +G+L K L +EM + P+
Sbjct: 313 DMIERKINPNL---------------VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG 362
S LING R + K L L+I +PN + Y+TLI C +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRK---DCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK---AYNMYME 417
L + S RGLV + T++ G ++ ++F + VH YN+ ++
Sbjct: 415 LFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 11/170 (6%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
SI ++ TY+ +I C++ R+ + +L M K P+ ++Y +I GFC + K
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
E EM Q+G++ + TY++LI R A +F++M+S P+ +T+ L+
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
C G+ +KA + + + PD ++TYN +I G+C G+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPD--------IYTYNIMIEGMCKAGK 513
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 46/265 (17%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG-FCQNRELRK 238
G+ P + T N++++G C R+ +A+ ++ M EMG PD V++ +I G F N K
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN----K 198
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A E +DR V G D TY +++N C +G+ L L ++M
Sbjct: 199 ASEAVALIDRMVQRGCQ-----------PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENC 352
+ VI S +I+ L K D A ++T M PN I Y +LI
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDD---------ALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
N G ++A+R M+E P+ ++ LI ++ + KA
Sbjct: 299 CN---------------YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 413 NMYMEMVRYGFVSHMFSVLALLTAL 437
+Y EM++ ++F+ +L+
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGF 368
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 153/339 (45%), Gaps = 38/339 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL TY +I C + + +L M + + D + Y +I G C + A++
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
+M+ KGI PD FTY+ LI LC+ R S+A L +ML PD + F L+ A
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 154 LEGEFSKAFHMHHQMIH-KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
EG+ +A ++ +M+ K PD V YN +I G C RVEE + + R M
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVV--------AYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED-- 270
+ GL + V+Y +I GF Q R+ A + +M V D +TY L+ GL +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP-DIMTYNILLDGLCNNGNV 442
Query: 271 --------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
TY ++I A C G++ L +S KG P+ V + +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
++G +K ++ A + + D +PN Y+TLI
Sbjct: 503 MSGFCRKGLKEEADALFVEMKED---GPLPNSGTYNTLI 538
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 178/439 (40%), Gaps = 62/439 (14%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ ++K++ M + + + + M G+S + +Y I FC A
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG 134
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G P T +SL+ C R+SEA L +M+ PD +TFTTL+H
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ S+A + +M+ KG PD V TY A+I+GLC G + AL +L M + +
Sbjct: 195 KASEAVALVERMVVKGCQPDLV--------TYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
D V Y +I G C+ + + A++L +M+ K + D TY LI
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK--------------PDVFTYNPLI 292
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ C G L +M K PD V + LI+ K+ + L+ A+ +Y
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK---------LVEAEKLY 343
Query: 337 TSM-------PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV--------------- 373
M P+ + Y+TLI+ C + + + + S RGLV
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 374 ----NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
+ A M+ PD YN+L+ C NV A ++ M + + +
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 430 VLALLTALRDHGMYNERSW 448
++ AL G E W
Sbjct: 464 YTTMIEALCKAGKV-EDGW 481
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 188/468 (40%), Gaps = 61/468 (13%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F+ L M + +V + I +L TY+ I C ++ + IL M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P ++ ++ GFC+ +A +M + G PD T+++L+ L + S
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 128 EAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV------ 178
EA L + M+ PD +T+ +++ C GE A ++ ++M + D V
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 179 ---------------------TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
G P +FTYN +I LC GR +A +L M E ++
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD V + +I F + +L +A +L EM + D Y +LI
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS-------------KHCFPDVVAYNTLIK 364
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
+C + + + + EMS +G + ++V + LI+G + + + +++D ++
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH- 423
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ + Y+ L++ NN G V A + M + + K D Y
Sbjct: 424 --PDIMTYNILLDGLCNN---------------GNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+I C+ V ++++ + G ++ + +++ G+ E
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P++ ++ ++ + + + + + + M +G+S + +Y I I+ FC+ +L A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+M K+ +G V T SL+N +C + + + L D+M G P
Sbjct: 133 LGKM-MKLGYGPSIV-------------TLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D+V + L++GL + + + A L+ + P+ + Y +I G
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVA---LVERMVVKGCQPDLVTYGAVIN-----------G 224
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L K RG + A + M +G + D +YN +I C+ ++ A++++ +M G
Sbjct: 225 LCK----RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 423 FVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLN 460
+F+ L++ L ++G +++ S ++ + L N+N
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NIN 317
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + D+ TYN ++ C VE + + M ++ + D ++Y +I C
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
++ + KG+ P+ TY++++ C K EA LF EM P+ T+ TL+
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
A +G+ + + + +M G D T
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDAST 568
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 214/514 (41%), Gaps = 71/514 (13%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
NS +D+ + N + +Q +E+G L M G PD + +I GFC
Sbjct: 95 NSSFALEDVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHA 151
KA + ++ G +PD TY+ +I C ++ A + M PD +T+ T++ +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPA 184
C G+ +A + +M+ + PD +T G +P
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+ TYN +++G+C GR++EA+ L MP G P+ +++ I++ C A +L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDE-DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+M RK G S T+ LIN C +G L + + + ++M G P+
Sbjct: 334 DMLRK---------------GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG 362
S+ + L++G K+ + +L +++ Y P+ + Y+T++ C + + + V
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY---PDIVTYNTMLTALCKDGKVEDAVE 435
Query: 363 LVKSFSMRGL-------------------VNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
++ S +G +A + D M + KPD Y+ L+
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 404 RRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL-RDHGMYNERSWVIQNTLRSCNLNDS 462
R V +A + E R G + + +++ L + +++ R C N++
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 463 ELHKVLNEIDTRKFPPIGATLLDVLAEIAMDGLL 496
+ +L I+ + + L++L E+ GL+
Sbjct: 556 S-YTIL--IEGLAYEGMAKEALELLNELCNKGLM 586
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 48/368 (13%)
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D S+ +I G C K+++ +E+ + G P+ Y++LI C K + +A LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 134 QEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNA 190
EM ++ T+T L++ G + F M+ +M GV P+ L+TYN
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN--------LYTYNC 273
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
+++ LC GR ++A + M E G+S + V+Y +I G C+ E+K+ KV
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR--------EMKLNEANKV 325
Query: 251 VWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
V D++ + L TY +LI+ +C G+L K L+L ++ +G P V ++L
Sbjct: 326 V---DQMKSDGINPNLI---TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC--SNNEFKSV-------- 360
++G +K DT ++ P+ + Y LI+ S+N K++
Sbjct: 380 VSGFCRKG---DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 361 VGLVK----------SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK 410
+GLV F ++G +NEA+R +M+E N +P+ +YN +I +C+ + ++
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 411 AYNMYMEM 418
A + EM
Sbjct: 497 ALKLLKEM 504
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 56/410 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ Y +I C +EK + M + GL + +Y +I G N + +E
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
+M + G+ P+ +TY+ ++ LC R +A+ +F EM + +T+ TL+ C E
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+ ++A + QM G+ +P L TYN +I G C +G++ +AL + R + G
Sbjct: 317 MKLNEANKVVDQMKSDGI--------NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
LSP V+Y I++SGFC+ + A ++ EM+ + + + TY L
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK--------------PSKVTYTIL 414
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ + + K + L M G +PD S+LI+G K + + A +
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE---------ASRL 465
Query: 336 YTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
+ SM PN +IY+T+I +G K G A + M E
Sbjct: 466 FKSMVEKNCEPNEVIYNTMI-----------LGYCK----EGSSYRALKLLKEMEEKELA 510
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
P+ A Y +I C+ +A + +M+ G + S+L+L++ ++
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSG-IDPSTSILSLISRAKN 559
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 14/245 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I +L TYN +I C + ++ K + + R + +GLSP ++Y +++GFC
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDDITFTTLM 149
A + EM+++GI P TY+ LI + +A L +E+ PD T++ L+
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H C++G+ ++A + M+ K P+ V YN +I G C G AL +L+
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEV--------IYNTMILGYCKEGSSYRALKLLK 502
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M E L+P+ SY +I C+ R+ ++A L +++ + G+D T + +
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERL---VEKMIDSGIDPSTSILSLISRAKN 559
Query: 270 DTYAS 274
D++ S
Sbjct: 560 DSHVS 564
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 26/272 (9%)
Query: 2 KLLRDSFTA-TLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGV 60
+L +D T + F M GV C ++ TYN +I C ++ +
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSC-------------NIVTYNTLIGGLCREMKLNEAN 323
Query: 61 GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQAL 120
++ M G++P+ ++Y +I GFC GKA ++ +G+ P TY+ L+
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 121 CSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C K S A + +EM P +T+T L+ KA + M G++PD
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD- 442
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ TY+ +IHG C G++ EA + + M E P+ V Y +I G+C+
Sbjct: 443 -------VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+A +L EM+ K + + +Y Y+++ L E
Sbjct: 496 RALKLLKEMEEKEL-APNVASYRYMIEVLCKE 526
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 158/399 (39%), Gaps = 67/399 (16%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
Y +I + + L+ + F EM+ P F L+ F++ + ++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
K VL ++++ +I G C G +E++ +L + E G SP+ V Y +I G
Sbjct: 157 SKVVLD---------VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 230 FCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGL---------------SDED-- 270
C+ E+ KA +L EM + GL +E TY L+ GL ED
Sbjct: 208 CCKKGEIEKAKDLFFEMGK---LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 271 -----TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
TY ++N C G + DEM +G + V + LI GL ++ + +
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 326 HLLLIIADYMYTS--MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL---------- 372
+ D M + PN I Y+TLI+ C + + L + RGL
Sbjct: 325 -----VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 373 ---------VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+ AA+ M E KP Y +LI R N+ KA + + M G
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 424 VSHMFSVLALLTALRDHGMYNERSWVIQNTL-RSCNLND 461
V + + L+ G NE S + ++ + ++C N+
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 224/511 (43%), Gaps = 51/511 (9%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
LRD+ LK F M + T A NS S Y+ +I C + R+E+ G+
Sbjct: 246 LRDA----LKVFDVMSK-----EVTCAPNSVS-------YSILIHGLCEVGRLEEAFGLK 289
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
M EKG P +Y +I C+ KA+ EM +G P+ TY+ LI LC
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
++ EA + ++M+ P IT+ L++ C +G AF + M + P+
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN---- 405
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+ T+N ++ GLC +G+ +A+ +L+ M + GLSPD VSY ++I G C+ + AY
Sbjct: 406 ----VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+L M+ + ++ D T+ ++INA+C QG+ M KG
Sbjct: 462 KLLSSMN---CFDIE-----------PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY-IIYDTLIENCSNNEFKS 359
D V + LI+G+ K +T+D L ++ + T+ + +I D L + C E +
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLE-GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
++G + + V D ++ G+ + L+ C NV+ + +
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP-NVYPYTIIINGL 626
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPP 478
++G V LL+A++D G+ + V + +N+ +L + L + R
Sbjct: 627 CQFGRVEE---AEKLLSAMQDSGV--SPNHVTYTVMVKGYVNNGKLDRALETV--RAMVE 679
Query: 479 IGATLLDVLAEIAMDGLLLDGRKCSYASAST 509
G L D + + G +L + + ST
Sbjct: 680 RGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 177/447 (39%), Gaps = 55/447 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q TY +IK C ++K + M +G P+ +Y +I G C + +A
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACC 153
+M + I P TY++LI C R+ A+ L M P+ TF LM C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ KA H+ +M+ G+ PD V +YN +I GLC G + A +L M
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIV--------SYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-------- 265
+ PD +++ +I+ FC+ + A M RK + LDEVT L+ G
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI-SLDEVTGTTLIDGVCKVGKTR 528
Query: 266 --------------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
L+ + +++ ++ + L + +++ G +P V + L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+GL R+ D ++ + +PN Y +I GL + G
Sbjct: 589 DGL---IRSGDITGSFRILELMKLSGCLPNVYPYTIIIN-----------GLCQF----G 630
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV--SHMFS 429
V EA + M + P+ Y +++ + + +A MV G+ ++S
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Query: 430 VLALLTALRDHGMYN-ERSWVIQNTLR 455
L L G+ N E S V LR
Sbjct: 691 SLLQGFVLSQKGIDNSEESTVSDIALR 717
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 206/450 (45%), Gaps = 55/450 (12%)
Query: 21 NGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRY 80
NGV + R I + TYN +I +C RV +L M ++ P+ ++
Sbjct: 356 NGVCRKMVKDR----IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-- 138
++ G C P KA M G+ PD +Y+ LI LC + ++ AY L M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 139 -PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
PD +TFT +++A C +G+ A M+ KG+ D VTG +I G+C
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG--------TTLIDGVCK 523
Query: 198 LGRVEEALGILRGMPEMGL--SPDAVSYII-VISGFCQNRELRKAYELKVEMDRKVVWGL 254
+G+ +AL IL + +M + +P +++ I+ ++S C+ +E EL + L
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE-----ELAM---------L 569
Query: 255 DEVTYAYLMQGLSDEDTYASLINAYCAQGEL---FKVLTLDDEMSHKGSLPDSVIDSLLI 311
++ L+ + TY +L++ G++ F++L L M G LP+ +++I
Sbjct: 570 GKINKLGLVPSVV---TYTTLVDGLIRSGDITGSFRILEL---MKLSGCLPNVYPYTIII 623
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN-EFKSVVGLVKSFSMR 370
NGL + R ++ + LL + D + PN++ Y +++ NN + + V++ R
Sbjct: 624 NGLCQFGRVEEAE-KLLSAMQDSGVS--PNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 371 GL-VNEAARAHDTMLEGNYKPDGAVYN---LLIFDHCRRLNVHKAYNMYMEMVRY--GFV 424
G +N+ R + ++L+G + N + D R + N + +V G +
Sbjct: 681 GYELND--RIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCI 738
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQNTL 454
S + + L+T L G +E + ++QN L
Sbjct: 739 SGL--CIFLVTRLCKEGRTDESNDLVQNVL 766
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 144/363 (39%), Gaps = 38/363 (10%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH-AC 152
AY M+ G + Y +++ ALC K +EA +F +S I F H
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALC-KNGYTEAAEMF---MSKILKIGFVLDSHIGT 234
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
L F + ++ + V+ VT +P +Y+ +IHGLC +GR+EEA G+ M
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMSKEVT-CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
E G P +Y ++I C + KA+ L D + G + TY
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNL---FDEMIPRGCKPNVH-----------TY 339
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
LI+ C G++ + + +M P + + LING K R A LL +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV--VPAFELLTVM 397
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ PN ++ L+E GL + G +A ML+ PD
Sbjct: 398 EK-RACKPNVRTFNELME-----------GLCRV----GKPYKAVHLLKRMLDNGLSPDI 441
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
YN+LI CR +++ AY + M + + A++ A G + S +
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 453 TLR 455
LR
Sbjct: 502 MLR 504
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 200/460 (43%), Gaps = 87/460 (18%)
Query: 3 LLRDSFTATLK-TFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVG 61
LL+++ +A ++ ++ M+R IQ ++ T+N +I C ++ K
Sbjct: 198 LLKENRSADVEYVYKEMIR-------------RKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL---EMDQKGILPDAFTYSSLIQ 118
++ M G SP+ +SY +I G+C GK Y+ EM + + P+ T++ LI
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 119 ALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
L + +F+EML P+ I++ +L++ C G+ S+A M +M+ GV P
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ L TYNA+I+G C ++EAL + + G P Y ++I +C+ +
Sbjct: 365 N--------LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
+ + LK EM+R+ + + D TY LI C G + L D++
Sbjct: 417 IDDGFALKEEMEREGI--------------VPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSN 354
+ KG LPD V +L+ G +K ++ KA +LL M P ++ Y+ +++ C
Sbjct: 463 TSKG-LPDLVTFHILMEGYCRKGESR--KAAMLLKEMSKMGLK-PRHLTYNIVMKGYCKE 518
Query: 355 NEFKSVVG--------------------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
K+ L++ +S +G + +A + MLE P+
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFV----SHMFSV 430
Y ++ EMV GFV H+F+V
Sbjct: 579 YEIV----------------KEEMVDQGFVPDIEGHLFNV 602
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 70/399 (17%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYEFKLEMDQKGILPDAFTY 113
R E G + G ALS + ++ NR Y +K EM ++ I P+ FT+
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYK-EMIRRKIQPNVFTF 226
Query: 114 SSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCL---EGEFSKAFHMHHQ 167
+ +I ALC ++++A + ++M P+ +++ TL+ C G+ KA + +
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 168 MIHKGVLPDFVT------GF---------------------SPALFTYNAIIHGLCFLGR 200
M+ V P+ T GF P + +YN++I+GLC G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
+ EA+ + M G+ P+ ++Y +I+GFC+N L++A LD
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA--------------LDMFGSV 392
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+ Y LI+AYC G++ L +EM +G +PD + LI GL +
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+ K + +P+ + + L+E C E + L+K S GL
Sbjct: 453 EAAKK----LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL------- 501
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
KP YN+++ +C+ N+ A NM +M
Sbjct: 502 ---------KPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 22/263 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S +Q +L TYN +I C +++ + + + +G P Y +I +C
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP--PDDITFTTLMH 150
+ K EM+++GI+PD TY+ LI LC + A LF ++ S PD +TF LM
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILME 478
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +GE KA + +M G P TYN ++ G C G ++ A +
Sbjct: 479 GYCRKGESRKAAMLLKEMSK--------MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 211 M-PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLS 267
M E L + SY +++ G+ Q +L A L EM K GL + +TY + + +
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK---GLVPNRITYEIVKEEMV 587
Query: 268 DEDTYASLINAYCAQGELFKVLT 290
D+ + +G LF V T
Sbjct: 588 DQGFVPDI------EGHLFNVST 604
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 52/301 (17%)
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
LM A E + +++ +MI + + P+ +FT+N +I+ LC G++ +A +
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPN--------VFTFNVVINALCKTGKMNKARDV 245
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQ---NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+ M G SP+ VSY +I G+C+ N ++ KA + EM V + T+ L+
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV-SPNLTTFNILID 304
Query: 265 GLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
G +D +Y SLIN C G++ + +++ D+M G P
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
+ + + LING K K+ L + + ++P +Y+ LI+
Sbjct: 365 NLITYNALINGFCKNDMLKEA---LDMFGSVKGQGAVPTTRMYNMLID------------ 409
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
++ G +++ + M PD YN LI CR N+ A ++ ++ G
Sbjct: 410 ---AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 423 F 423
Sbjct: 467 L 467
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 176/385 (45%), Gaps = 30/385 (7%)
Query: 21 NGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRY 80
+ VC F ++ + D+ TYN +I C ++ G+ R M GL P+ +SY
Sbjct: 314 DDTVCFFEEMKDM-CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-- 138
++ FC +A +F ++M + G++P+ +TY+SLI A C LS+A+ L EML
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 139 -PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
+ +T+T L+ C +A + +M GV+P+ L +YNA+IHG
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN--------LASYNALIHGFVK 484
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
++ AL +L + G+ PD + Y I G C L K KV M+ G+
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS---LEKIEAAKVVMNEMKECGIK-- 539
Query: 258 TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
++ Y +L++AY G + L L DEM V +LI+GL K
Sbjct: 540 ---------ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEA 376
+ I D+ + N I+ +I+ C +N+ ++ L + +GLV +
Sbjct: 591 KLVSKAVDYFNRISNDFGLQA--NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFD 401
A+ ++++GN+K + L + D
Sbjct: 649 T-AYTSLMDGNFKQGNVLEALALRD 672
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 12/216 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
I+ DL Y I C ++++E ++ M E G+ ++L Y ++ + + P +
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLMH 150
EM + I T+ LI LC + +S+A F + + + FT ++
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + + A + QM+ KG++PD Y +++ G G V EAL +
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTA--------YTSLMDGNFKQGNVLEALALRDK 673
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M E+G+ D ++Y ++ G +L+KA EM
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 127/341 (37%), Gaps = 63/341 (18%)
Query: 107 LPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFH 163
+P + +L L L EA F +M P + L+H G+
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
MI G P +FTYN +I +C G VE A G+ M GL PD V+Y
Sbjct: 249 FFKDMIGAGA--------RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDEDTYASLINAYC 280
+I GF + L D V + M+ + D TY +LIN +C
Sbjct: 301 NSMIDGFGKVGRLD-----------------DTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM- 339
G+L L EM G P+ V S L++ K+ + A Y M
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ---------AIKFYVDMR 394
Query: 340 -----PNYIIYDTLIE-NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
PN Y +LI+ NC G +++A R + ML+ + +
Sbjct: 395 RVGLVPNEYTYTSLIDANCK----------------IGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
Y LI C + +A ++ +M G + ++ S AL+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 171/397 (43%), Gaps = 49/397 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + T+ ++ CL+ R+ ++ M + G P+ + Y +I G C N A E
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM++KG+ D TY++L+ LC R S+A + ++M+ PD +TFT L+
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G +A ++ +MI V P+ V TYN+II+GLC GR+ +A M
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNV--------TYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G P+ V+Y +ISGFC+ R + + +L R G + +D TY
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKL---FQRMSCEGFN-----------ADIFTYN 355
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI+ YC G+L L + M + PD + +L++GL + L+ D
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA-----LVKFD 410
Query: 334 YMYTSMP--NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
M S + Y+ +I C ++ + L + G+ KP
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV----------------KP 454
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
D Y ++I C+ +A + M G + M
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 153/362 (42%), Gaps = 52/362 (14%)
Query: 83 TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SP 139
TGF ++ A+ EM LP ++ L+ A + RR + Q+M
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
D +FT L+H C S A + +M+ G+ P++ T+ +++HG C +
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMK--------LGYEPSIVTFGSLLHGFCLVN 155
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
R+ +A ++ M + G P+ V Y +I G C+N EL A EL EM++K + G D VTY
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL-GADVVTY 214
Query: 260 AYLMQGL----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
L+ GL D T+ +LI+ + QG L + L EM
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
P++V + +INGL R D K L+ + + PN + Y+TLI
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF---PNVVTYNTLIS------- 324
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
F +V+E + M + D YN LI +C+ + A +++
Sbjct: 325 --------GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 418 MV 419
MV
Sbjct: 377 MV 378
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
S+ + TYN II C+ R+ MA KG P+ ++Y +I+GFC R +
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
+ M +G D FTY++LI C +L A +F M+S PD IT L+H
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C+ GE A M ++ + YN +IHGLC +VE+A + +
Sbjct: 396 LCVNGEIESALVKFDDMRES---EKYI-----GIVAYNIMIHGLCKADKVEKAWELFCRL 447
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P G+ PDA +Y I+I G C+N R+A EL
Sbjct: 448 PVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 187/456 (41%), Gaps = 59/456 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ + +++ ++R E + + M G+S D S+ +I FC RC ++ +
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFC--RCSRLSFALSV 128
Query: 100 --EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCL 154
+M + G P T+ SL+ C R+ +A+ L M+ P+ + + TL+ C
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
GE + A + ++M KG+ D VT YN ++ GLC+ GR +A +LR M +
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVT--------YNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED--TY 272
++PD V++ +I F + L +A EL EM +Q D + TY
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEM----------------IQSSVDPNNVTY 284
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
S+IN C G L+ D M+ KG P+ V + LI+G K R D L ++
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF-CKFRMVDEGMKLFQRMS 343
Query: 333 DYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG-------------------LVKSFSMRGL 372
+ + + Y+TLI C + + + L+ + G
Sbjct: 344 CEGFNA--DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLA 432
+ A D M E YN++I C+ V KA+ ++ + G +
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 433 LLTALRDHGMYNERSWVIQNTLRS---CNLNDSELH 465
++ L +G E +I+ C +N + H
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGIICQMNAEDDH 497
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC-NNRCPG 92
E D+ TYN +I +C + ++ + I M + ++PD +++ ++ G C N
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+F +M + Y+ +I LC ++ +A+ LF + PD T+T ++
Sbjct: 405 ALVKFD-DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVL 174
C G +A + +M +G++
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 44/286 (15%)
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
F AF + +M+H LP V + ++ L R E + + M G+S
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVD--------FTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
D S+ I+I FC+ L A + +M K+ + VT+ L+ G L+N
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKM-MKLGYEPSIVTFGSLLHGFC-------LVN 155
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
G+ F ++ L M G P+ V+ + LI+GL K+ + ++ L + + M
Sbjct: 156 RI---GDAFSLVIL---MVKSGYEPNVVVYNTLIDGL-----CKNGELNIALELLNEMEK 204
Query: 338 SM--PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+ + Y+TL+ GL S G ++AAR M++ + PD +
Sbjct: 205 KGLGADVVTYNTLL-----------TGLCYS----GRWSDAARMLRDMMKRSINPDVVTF 249
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
LI ++ N+ +A +Y EM++ + + +++ L HG
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 174/405 (42%), Gaps = 55/405 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +TY+K++ C ++E + M GL D +Y ++ FC +A ++
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM + G P+ TY++LI A +++S A LF+ MLS P+ +T++ L+ C
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFS--------PALFTYNAIIHGLCFLGRVEEALGI 207
G+ KA + +M +PD F P + TY A++ G C RVEEA +
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
L M G P+ + Y +I G C+ +L +A E+K EM G Y
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH---GFPATLY-------- 710
Query: 268 DEDTYASLINAYCAQGELFKVLTLD------DEMSHKGSLPDSVIDSLLINGLDKKARTK 321
TY+SLI+ Y FKV D +M P+ VI + +I+GL K +T
Sbjct: 711 ---TYSSLIDRY------FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT- 760
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
D L+ ++ + PN + Y +I+ F M G + +
Sbjct: 761 DEAYKLMQMMEE--KGCQPNVVTYTAMIDG---------------FGMIGKIETCLELLE 803
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
M P+ Y +LI C+ + A+N+ EM + + +H
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 32/382 (8%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
NSE + ++ TY ++ C RVE+ +L M+ +G P+ + Y +I G C
Sbjct: 633 NSE--RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A E K EM + G +TYSSLI +R A + +ML P+ + +T +
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C G+ +A+ + M KG P+ V TY A+I G +G++E L +L
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVV--------TYTAMIDGFGMIGKIETCLELL 802
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M G++P+ V+Y ++I C+N L A+ L EM ++ W Y +++G +
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTAGYRKVIEGFNK 861
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
E + L L DE+ + P + LLI+ L K R + LL
Sbjct: 862 ---------------EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL-EMALRLL 905
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + T + Y++LIE+ C N+ ++ L + +G++ E ++ ++++G
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE-MQSFCSLIKGL 964
Query: 388 YKPDGAVYNLLIFDHCRRLNVH 409
++ LL+ D + +
Sbjct: 965 FRNSKISEALLLLDFISHMEIQ 986
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 178/441 (40%), Gaps = 78/441 (17%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR---------CPGK 93
+N ++ +C +L+ M + G P + Y +I C ++ K
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
AY EM G++ + SS + LCS + +A+ + +EM+ PD T++ +++
Sbjct: 435 AYS---EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + AF + +M G++ D ++TY ++ C G +E+A
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVAD--------VYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDE 269
M E+G +P+ V+Y +I + + +++ A EL M L +G L +
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM---------------LSEGCLPNI 588
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS----------------VIDSLLING 313
TY++LI+ +C G++ K + + M +PD V L++G
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG- 371
K R ++ + L+ A M PN I+YD LI+ C + + S G
Sbjct: 649 FCKSHRVEEARK---LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 372 ---------LVNE---------AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
L++ A++ MLE + P+ +Y +I C+ +AY
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 414 MYMEMVRYGFVSHMFSVLALL 434
+ M G ++ + A++
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMI 786
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 182/451 (40%), Gaps = 78/451 (17%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E+ D Y K+I C E+ + L M P+ ++Y ++ G N + G
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL-------------------- 132
+ M +G P ++SL+ A C+ S AY L
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 133 ---------------------FQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQM 168
+ EML+ + I ++ C G++ KAF + +M
Sbjct: 415 GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
I +G +PD TY+ +++ LC ++E A + M GL D +Y I++
Sbjct: 475 IGQGFIPD--------TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
FC+ + +A + EM R+V + V TY +LI+AY ++
Sbjct: 527 SFCKAGLIEQARKWFNEM-REVGCTPNVV-------------TYTALIHAYLKAKKVSYA 572
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYD 346
L + M +G LP+ V S LI+G K + + I + M S +P+ +Y
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ-----IFERMCGSKDVPDVDMYF 627
Query: 347 TLIENCSNNEFKSVV---GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
++ N+E +VV L+ F V EA + D M +P+ VY+ LI C
Sbjct: 628 KQYDD--NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 404 RRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+ + +A + EM +GF + +++ +L+
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 161/423 (38%), Gaps = 60/423 (14%)
Query: 44 NKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ 103
N ++++HC + L + + P +Y +I F A EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFH 163
+ D FT +LC + EA L + PD + +T L+ C F +A
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 164 MHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAIIHGLC 196
++M LP+ VT G P+ +N+++H C
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G A +L+ M + G P V Y I+I C +++ L ++ L E
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD-----SLNCDL-----LDLAE 433
Query: 257 VTYAYLMQG--LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y+ ++ + ++ +S C+ G+ K ++ EM +G +PD+ S ++N L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 315 DKKARTKDTKAHLLL-------IIAD-YMYTSMPNYIIYDTLIENCSN--NEFKSV---- 360
++ + A LL ++AD Y YT M + LIE NE + V
Sbjct: 494 CNASKME--LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 361 -----VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
L+ ++ V+ A +TML P+ Y+ LI HC+ V KA ++
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 416 MEM 418
M
Sbjct: 612 ERM 614
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 107/271 (39%), Gaps = 41/271 (15%)
Query: 8 FTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGV 60
F ATL T+ ++ R + + + S ++ Y ++I C + + ++
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 61 GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQAL 120
+++ M EKG P+ ++Y +I GF E M KG+ P+ TY LI
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 121 CSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP-- 175
C L A++L +EM P + ++ EF ++ + ++ P
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFL 882
Query: 176 -----------------------DFVTGFSPALF----TYNAIIHGLCFLGRVEEALGIL 208
+ V FS L TYN++I LC +VE A +
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
M + G+ P+ S+ +I G +N ++ +A
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 188/441 (42%), Gaps = 60/441 (13%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
L+ A L + M+ +GV+ L T+N ++ C +EK G++
Sbjct: 133 LQGKLDAALWLRKKMIYSGVI-------------PGLITHNHLLNGLCKAGYIEKADGLV 179
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
R M E G SP+ +SY +I G C+ KA M++ GI P+ T + ++ ALC K
Sbjct: 180 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK 239
Query: 124 RRL-SEAYHLFQEML------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
+ + L +E+L +P D + T LM +C G +A + +M K V D
Sbjct: 240 GVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
V YN II GLC G + A G + M + G++PD +Y +IS C+ +
Sbjct: 300 SV--------VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMS 296
+A +L M V D+++Y ++QGL C G++ + M
Sbjct: 352 DEACDLHGTMQNGGV-APDQISYKVIIQGL-------------CIHGDVNRANEFLLSML 397
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
LP+ ++ +++I+G R DT + L ++ Y PN + LI
Sbjct: 398 KSSLLPEVLLWNVVIDGY---GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH------ 448
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
G VK G + +A + M PD YNLL+ C ++ A+ +Y
Sbjct: 449 -----GYVKG----GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYD 499
Query: 417 EMVRYGFVSHMFSVLALLTAL 437
EM+R G + + L+ L
Sbjct: 500 EMLRRGCQPDIITYTELVRGL 520
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 25/280 (8%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
V + + + + M++K + D++ Y +I G C++ AY F +M ++G+ PD FTY++
Sbjct: 281 VVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 116 LIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LI ALC + + EA L M + PD I++ ++ C+ G+ ++A M+
Sbjct: 341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSS 400
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+LP+ + +N +I G G AL +L M G+ P+ + +I G+ +
Sbjct: 401 LLPE--------VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
L A+ +K EM + D TY L+ A C G L L
Sbjct: 453 GGRLIDAWWVKNEMRSTKI--------------HPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
DEM +G PD + + L+ GL K R K ++ L I A
Sbjct: 499 DEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 73/301 (24%)
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+++M CL+G+ A + +MI+ GV+P L T+N +++GLC G +E+A
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIP--------GLITHNHLLNGLCKAGYIEKAD 176
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
G++R M EMG SP+ VSY +I G C + KA
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA-------------------------- 210
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
L L + M+ G P+ V +++++ L +K +
Sbjct: 211 -----------------------LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK 247
Query: 326 HLLLIIADYMYTSMP-NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
LL I D + P + +I L+++C N G V +A M
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKN---------------GNVVQALEVWKEMS 292
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYN 444
+ N D VYN++I C N+ AY +MV+ G +F+ L++AL G ++
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 445 E 445
E
Sbjct: 353 E 353
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 46/243 (18%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D+ TYN +I C + ++ + M G++PD +SY+ +I G C + +A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 96 EFKLE-----------------------------------MDQKGILPDAFTYSSLIQAL 120
EF L M G+ P+ +T ++LI
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 121 CSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
RL +A+ + EM S PD T+ L+ A C G AF ++ +M+ +G PD
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+T Y ++ GLC+ GR+++A +L + G++ D V ++I+ + + +
Sbjct: 511 IT--------YTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPG 562
Query: 238 KAY 240
+AY
Sbjct: 563 EAY 565
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 128/283 (45%), Gaps = 25/283 (8%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +YN +I C +++++ L M ++GL PD +Y +I G N +A +F
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+ + G+LPD +TYS +I C R E F EM+S P+ + + L+ A C
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G S A + M HKG+ SP TY ++I G+ + RVEEA + M G
Sbjct: 659 GRLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L P+ Y +I G+ + ++ K L EM K V ++ TY +
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH--------------PNKITYTVM 756
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
I Y G + + L +EM KG +PDS+ I G K+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 212/513 (41%), Gaps = 75/513 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ L TY+ ++K +R+ +L+ M +KG P+ + Y +I F KA
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----------------- 138
E K M KG+ + TY++LI+ C + A L +EMLS
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 139 ---------------------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
P TTL+ C G+ SKA + Q ++KG + D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
T NA++HGLC G+++EA I + + G D VSY +ISG C ++L
Sbjct: 506 RTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 238 KAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
+A+ +D V GL D TY+ L+ GL + + I + D+
Sbjct: 558 EAFMF---LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW-------------DDC 601
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIEN-C 352
G LPD S++I+G K RT++ + D M + PN ++Y+ LI C
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF-----DEMMSKNVQPNTVVYNHLIRAYC 656
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
+ + L + +G+ +A + ++++G L+F+ R +
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 413 NMYMEMVR-YGFVSHMFSVLALLTALRDHGMY-NERSWVIQNTLRSCNLNDSELHKVLNE 470
Y ++ YG + M V LL + ++ N+ ++ + + + N +E ++LNE
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 471 IDTRKFPPIGATLLDVLAEIAMDGLLLDGRKCS 503
+ + P T + + G +L+ K S
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 170/465 (36%), Gaps = 124/465 (26%)
Query: 69 KGLSPDALSYRYVITGFC---------------------------NNRCPG--------K 93
KG+SPD + I FC N G +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A+ FK +M ++G+ P TYS L++ L +R+ +AY + +EM PP+ I + L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ G +KA + M+ KG+ S TYN +I G C G+ + A +L+
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGL--------SLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 211 MPEMG-----------------------------------LSPDAVSYIIVISGFCQNRE 235
M +G +SP +ISG C++ +
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----------------------DEDTYA 273
KA EL + K + +D T L+ GL D +Y
Sbjct: 486 HSKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI+ C + +L + DEM +G PD+ S+LI GL + ++ + D
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA----IQFWDD 600
Query: 334 YMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
M P+ Y +I+ C E E D M+ N +P+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNT 645
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
VYN LI +CR + A + +M G + + +L+ +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 47/365 (12%)
Query: 101 MDQKGILPDAFTYSSLIQALCSK---RRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE 157
+ KG+ P T + L+ +L ++ EA+ + + +SP D FTT ++A C G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSP-DVYLFTTAINAFCKGGK 275
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + +M GV P+ VT +N +I GL GR +EA M E G+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVT--------FNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
P ++Y I++ G + + + AY + EM +K G + Y +LI+
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK---GFP-----------PNVIVYNNLID 373
Query: 278 AYCAQGELFKVLTLDDEMSHKG-SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
++ G L K + + D M KG SL S ++ LI G K + D LL + +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT-LIKGYCKNGQA-DNAERLLKEMLSIGF 431
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
N + F SV+ L+ S M + A R ML N P G +
Sbjct: 432 --------------NVNQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSPGGGLLT 474
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL-R 455
LI C+ KA ++ + + GFV + ALL L + G +E + + L R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 456 SCNLN 460
C ++
Sbjct: 535 GCVMD 539
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I + ATY +IK ++ RVE+ + M +GL P+ Y +I G+ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
EM K + P+ TY+ +I ++EA L EM PD IT+ ++
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 151 ACCLEGEFSKAF 162
+G +AF
Sbjct: 794 GYLKQGGVLEAF 805
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 128/283 (45%), Gaps = 25/283 (8%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +YN +I C +++++ L M ++GL PD +Y +I G N +A +F
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+ + G+LPD +TYS +I C R E F EM+S P+ + + L+ A C
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G S A + M HKG+ SP TY ++I G+ + RVEEA + M G
Sbjct: 659 GRLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L P+ Y +I G+ + ++ K L EM K V ++ TY +
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH--------------PNKITYTVM 756
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
I Y G + + L +EM KG +PDS+ I G K+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 212/513 (41%), Gaps = 75/513 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ L TY+ ++K +R+ +L+ M +KG P+ + Y +I F KA
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----------------- 138
E K M KG+ + TY++LI+ C + A L +EMLS
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 139 ---------------------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
P TTL+ C G+ SKA + Q ++KG + D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
T NA++HGLC G+++EA I + + G D VSY +ISG C ++L
Sbjct: 506 RTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 238 KAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
+A+ +D V GL D TY+ L+ GL + + I + D+
Sbjct: 558 EAFMF---LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW-------------DDC 601
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIEN-C 352
G LPD S++I+G K RT++ + D M + PN ++Y+ LI C
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF-----DEMMSKNVQPNTVVYNHLIRAYC 656
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
+ + L + +G+ +A + ++++G L+F+ R +
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 413 NMYMEMVR-YGFVSHMFSVLALLTALRDHGMY-NERSWVIQNTLRSCNLNDSELHKVLNE 470
Y ++ YG + M V LL + ++ N+ ++ + + + N +E ++LNE
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 471 IDTRKFPPIGATLLDVLAEIAMDGLLLDGRKCS 503
+ + P T + + G +L+ K S
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 170/465 (36%), Gaps = 124/465 (26%)
Query: 69 KGLSPDALSYRYVITGFC---------------------------NNRCPG--------K 93
KG+SPD + I FC N G +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A+ FK +M ++G+ P TYS L++ L +R+ +AY + +EM PP+ I + L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ G +KA + M+ KG+ S TYN +I G C G+ + A +L+
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGL--------SLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 211 MPEMG-----------------------------------LSPDAVSYIIVISGFCQNRE 235
M +G +SP +ISG C++ +
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----------------------DEDTYA 273
KA EL + K + +D T L+ GL D +Y
Sbjct: 486 HSKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI+ C + +L + DEM +G PD+ S+LI GL + ++ + D
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA----IQFWDD 600
Query: 334 YMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
M P+ Y +I+ C E E D M+ N +P+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNT 645
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
VYN LI +CR + A + +M G + + +L+ +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 47/365 (12%)
Query: 101 MDQKGILPDAFTYSSLIQALCSK---RRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE 157
+ KG+ P T + L+ +L ++ EA+ + + +SP D FTT ++A C G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSP-DVYLFTTAINAFCKGGK 275
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + +M GV P+ VT +N +I GL GR +EA M E G+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVT--------FNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
P ++Y I++ G + + + AY + EM +K G + Y +LI+
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK---GFP-----------PNVIVYNNLID 373
Query: 278 AYCAQGELFKVLTLDDEMSHKG-SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
++ G L K + + D M KG SL S ++ LI G K + D LL + +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT-LIKGYCKNGQA-DNAERLLKEMLSIGF 431
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
N + F SV+ L+ S M + A R ML N P G +
Sbjct: 432 --------------NVNQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSPGGGLLT 474
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL-R 455
LI C+ KA ++ + + GFV + ALL L + G +E + + L R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 456 SCNLN 460
C ++
Sbjct: 535 GCVMD 539
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I + ATY +IK ++ RVE+ + M +GL P+ Y +I G+ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
EM K + P+ TY+ +I ++EA L EM PD IT+ ++
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 151 ACCLEGEFSKAF 162
+G +AF
Sbjct: 794 GYLKQGGVLEAF 805
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 176/417 (42%), Gaps = 64/417 (15%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D+ YN +I C M R++ +L M K SPD ++Y +I C+ A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
++ P TY+ LI+A + + EA L EMLS PD T+ T++ C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT-----------------------GFS----PALF 186
EG +AF M + KG PD ++ FS P +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TY+ +I LC G++EEA+ +L+ M E GL+PDA SY +I+ FC+ L A E +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF---L 391
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+ + G L D Y +++ C G+ + L + ++ G P+S
Sbjct: 392 ETMISDGC-----------LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVK 365
+ + + L + K L +I + M + P+ I Y+++I +C E
Sbjct: 441 YNTMFSAL----WSSGDKIRALHMILEMMSNGIDPDEITYNSMI-SCLCRE--------- 486
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
G+V+EA M + P YN+++ C+ + A N+ MV G
Sbjct: 487 -----GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 16/239 (6%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
SE ++ TY+ +I C ++E+ + +L+ M EKGL+PDA SY +I FC
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF---QEMLSPPDDITFTTLM 149
A EF M G LPD Y++++ LC + +A +F E+ P+ ++ T+
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A G+ +A HM +M+ G+ PD + TYN++I LC G V+EA +L
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEI--------TYNSMISCLCREGMVDEAFELLV 497
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGL 266
M P V+Y IV+ GFC+ + A + ++ V G +E TY L++G+
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV---LESMVGNGCRPNETTYTVLIEGI 553
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 180/453 (39%), Gaps = 74/453 (16%)
Query: 45 KIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQK 104
KI + C + + +L M KG +PD + +I GF R KA +E+ +K
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEK 152
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKA 161
PD F Y++LI C R+ +A + M S PD +T+ ++ + C G+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 162 FHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAIIHG 194
+ +Q++ P +T G P +FTYN II G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-----DRK 249
+C G V+ A ++R + G PD +SY I++ + + +L +M D
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
VV TY+ LI C G++ + + L M KG PD+
Sbjct: 333 VV-------------------TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
LI ++ R L +I+D +P+ + Y+T++ N
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISD---GCLPDIVNYNTVLATLCKN-------------- 416
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
G ++A + E P+ + YN + + +A +M +EM+ G +
Sbjct: 417 -GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 430 VLALLTALRDHGMYNERSWVIQNTLRSCNLNDS 462
++++ L GM +E ++ + +RSC + S
Sbjct: 476 YNSMISCLCREGMVDE-AFELLVDMRSCEFHPS 507
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 35/342 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S++ Q + TY +I+ L V++ + ++ M +GL PD +Y +I G C
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A+E ++ KG PD +Y+ L++AL ++ + E L +M S P+ +T++ L+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C +G+ +A ++ M KG+ PD ++Y+ +I C GR++ A+ L
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPD--------AYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR--------------KVVWGLD 255
M G PD V+Y V++ C+N + +A E+ ++ +W
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 256 EVTYAYLM------QGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ A M G+ DE TY S+I+ C +G + + L +M P V +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
+++ G K R +D L ++ + PN Y LIE
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGN---GCRPNETTYTVLIE 551
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 125/338 (36%), Gaps = 82/338 (24%)
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD------FVTGF-------------- 181
D + H C G + ++ H+ M+ KG PD + GF
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 182 ------SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P +F YNA+I+G C + R+++A +L M SPD V+Y I+I C +
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE-----DTYASLINAYCAQGELFKVLT 290
L A LKV L Q LSD TY LI A +G + + L
Sbjct: 209 LDLA--LKV-----------------LNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
L DEM +G PD + +I G+ K+ + D E
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEG-------------------------MVDRAFE 284
Query: 351 NCSNNEFKSVVGLVKSFS--MRGLVN-----EAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
N E K V S++ +R L+N E + M P+ Y++LI C
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 404 RRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
R + +A N+ M G +S L+ A G
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S+ + F R V F S+ D+ YN ++ C + ++ + I +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
E G SP++ SY + + ++ +A LEM GI PD TY+S+I LC + +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
EA+ L +M S P +T+ ++ C A ++ M+ G P+
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET----- 544
Query: 184 ALFTYNAIIHGLCFLGRVEEAL 205
TY +I G+ F G EA+
Sbjct: 545 ---TYTVLIEGIGFAGYRAEAM 563
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 142/309 (45%), Gaps = 40/309 (12%)
Query: 40 LATYNKIIKQHCLMQ-RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+A+ N +IK C V+ G+ I M ++G PD+ +Y +I+G C +A +
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM +K P TY+SLI LC + + EA +EM S P+ T+++LM C +
Sbjct: 216 TEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD 275
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A + M+ +G P+ V TY +I GLC +++EA+ +L M G
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMV--------TYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEM------DRKVVWGLDEVTYAYLMQGLS-- 267
L PDA Y VISGFC + R+A EM ++ W + T +++GL
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN 387
Query: 268 -------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ +T SL+ C +GE K + L DE+ G +P
Sbjct: 388 YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWK 447
Query: 309 LLI-NGLDK 316
LLI + LDK
Sbjct: 448 LLIGHTLDK 456
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 43/303 (14%)
Query: 129 AYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+H ++ P + T++ E + + AF + M G P + +
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMRE--------IGLPPTVASL 159
Query: 189 NAIIHGLCFL-GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
N +I LC G V+ L I MP+ G PD+ +Y +ISG C+ + +A +L EM
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
K TY SLIN C + + + +EM KG P+
Sbjct: 220 EK--------------DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKS 366
S L++GL K R+ +++A PN + Y TLI C + + V L+
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMA---RGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
+++GL KPD +Y +I C +A N EM+ G +
Sbjct: 323 MNLQGL----------------KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 427 MFS 429
+
Sbjct: 367 RLT 369
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R+ S+ I+ ++ TY+ ++ C R + + + M +G P+ ++Y +ITG
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDD 142
C + +A E M+ +G+ PDA Y +I C+ + EA + EM+ P+
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 143 ITFTT-------LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
+T+ ++ C S+AF ++ M +G+ S + T +++ L
Sbjct: 368 LTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGI--------SVEVETLESLVKCL 418
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
C G ++A+ ++ + G P ++ ++I
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 194/471 (41%), Gaps = 76/471 (16%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ATYN +I + C + E VG L ++KGL P+ LSY +I +C ++ A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
L+M ++G PD TY LI L + +A ++ +++ PD + LM C
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 154 LEGEFSKAFHMHHQMIHKGVLPD------FVTGF--------SPALFT------------ 187
G F A + +M+ + +LPD + GF + +F+
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 188 -YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
+NA+I G C G ++EAL + M E L PD +Y +I G+ + +++ A ++ M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
++ + + TY SLIN +C QG+ EM + +P+ V
Sbjct: 582 EKN--------------KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVVGLV 364
+ LI L K++ T + + + M T+ +PN + ++ L++ G V
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYW----ELMMTNKCVPNEVTFNCLLQ-----------GFV 672
Query: 365 KSFSMRGLVNEAARAHDT----------MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
K S + L H M + A YN + C V A
Sbjct: 673 KKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMF 732
Query: 415 YMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELH 465
+MV+ GF S A+L G N + W + CNL + L
Sbjct: 733 QDKMVKKGFSPDPVSFAAILHGFCVVG--NSKQW---RNMDFCNLGEKGLE 778
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 58/432 (13%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA---YEF 97
+++ K++ ++ + +E +G LR K L+ +ALS+ V+ + + KA Y++
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVK-LTHEALSH--VLHAYAESGSLSKAVEIYDY 159
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI-TFTT--LMHACCL 154
+E+ +PD +SL+ L RRL +A ++ EM D + ++T L+ C
Sbjct: 160 VVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCN 217
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
EG+ + KG +P+ V YN II G C LG +E A + + +
Sbjct: 218 EGKVEVGRKLIEGRWGKGCIPNIV--------FYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 215 GLSPDAVSYIIVISGFCQNREL----RKAYELKVEMDRKVVWGLDEVTYAYLMQGLS--- 267
G P ++ +I+GFC+ + R E+K R VW L+ + A G
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 268 --------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
D TY LIN C +G+ + DE S KG +P+++ + LI
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
K++ D + LLL +A+ P+ + Y LI GLV S M V
Sbjct: 390 Y-CKSKEYDIASKLLLQMAE--RGCKPDIVTYGILIH-----------GLVVSGHMDDAV 435
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLAL 433
N + +++ PD A+YN+L+ C+ A ++ EM+ + + L
Sbjct: 436 NMKVK----LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 434 LTALRDHGMYNE 445
+ G ++E
Sbjct: 492 IDGFIRSGDFDE 503
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 162/395 (41%), Gaps = 46/395 (11%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
++K C +VE G ++ G KG P+ + Y +I G+C AY E+ KG
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMH 165
+P T+ ++I C + + L E+ ++ L + ++ ++ + +
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNI--IDAKYRHGYKVD 328
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
++ + P + TYN +I+ LC G+ E A+G L + GL P+ +SY
Sbjct: 329 PAESIGWIIAN---DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------------------- 266
+I +C+++E A +L ++M + D VTY L+ GL
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGC-KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 267 ---SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
D Y L++ C G L EM + LPD+ + + LI+G + +
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
+ L S+ + D + N ++K F G+++EA + M
Sbjct: 505 RKVFSL--------SVEKGVKVDVVHHN----------AMIKGFCRSGMLDEALACMNRM 546
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
E + PD Y+ +I + ++ ++ A ++ M
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N E + D TY+ II + Q + + I R M + P+ ++Y +I GFC C
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC---CQ 603
Query: 92 GK---AYEFKLEMDQKGILPDAFTYSSLIQALCSKRR-LSEAYHLFQEMLSP---PDDIT 144
G A E EM + ++P+ TY++LI++L + L +A + ++ M++ P+++T
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 145 FTTLMHACCLE------GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
F L+ + E + H + + G+S YN+ + LC
Sbjct: 664 FNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH 723
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
G V+ A M + G SPD VS+ ++ GFC
Sbjct: 724 GMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 53/321 (16%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D A YN ++ C R + M ++ + PDA Y +I GF + +A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 96 E-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+ F L + +KG+ D ++++I+ C L EA M PD T++T++
Sbjct: 506 KVFSLSV-EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+ + + A + M P+ V TY ++I+G C G + A + M
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVV--------TYTSLINGFCCQGDFKMAEETFKEM 616
Query: 212 PEMGLSPDAVSYIIVISGFC-QNRELRKA-YELKVEMDRKVVWGLDEVTYAYLMQG---- 265
L P+ V+Y +I ++ L KA Y ++ M K V +EVT+ L+QG
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV--PNEVTFNCLLQGFVKK 674
Query: 266 -----LSDED---------------------------TYASLINAYCAQGELFKVLTLDD 293
L++ D Y S + C G + D
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Query: 294 EMSHKGSLPDSVIDSLLINGL 314
+M KG PD V + +++G
Sbjct: 735 KMVKKGFSPDPVSFAAILHGF 755
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 201/503 (39%), Gaps = 99/503 (19%)
Query: 3 LLRDSF-TATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVG 61
LL+ F T ++ +R M+ G + L TY+ ++ + ++ +G
Sbjct: 198 LLKSRFCTEAMEVYRRMILEG-------------FRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+L+ M GL P+ ++ I +AYE MD +G PD TY+ LI ALC
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 122 SKRRLSEAYHLFQEMLSP--------------------------------------PDDI 143
+ R+L A +F++M + PD +
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TFT L+ A C G F +AF M +G+LP+ L TYN +I GL + R+++
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPN--------LHTYNTLICGLLRVHRLDD 416
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV------------ 251
AL + M +G+ P A +YI+ I + ++ + A E +M K +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 252 ----WGLD----EVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
G D ++ Y GL D TY ++ Y GE+ + + L EM G P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D ++ + LIN L K R D + + + + P + Y+TL+ N
Sbjct: 537 DVIVVNSLINTLYKADRV-DEAWKMFMRMKEMKLK--PTVVTYNTLLAGLGKN------- 586
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
G + EA + M++ P+ +N L C+ V A M +M+ G
Sbjct: 587 --------GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 423 FVSHMFSVLALLTALRDHGMYNE 445
V +F+ ++ L +G E
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKE 661
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 170/418 (40%), Gaps = 66/418 (15%)
Query: 16 RHMVRNGVVCRFTAARNSESIQQDLATY----NKIIKQHCLMQRVEKGVGILRGMAEKGL 71
+V NG+ R+ +SI + Y N + L ++ K +G+
Sbjct: 737 ERLVANGI------CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV--------- 781
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
P +Y +I G A + L++ G +PD TY+ L+ A ++ E +
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
L++EM + + IT ++ G A +++ ++ FSP TY
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD-------RDFSPTACTY 894
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+I GL GR+ EA + GM + G P+ Y I+I+GF + E A L M +
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ V D TY+ L++ C G + + L E+ G PD V +
Sbjct: 955 EGVR--------------PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTS---MPNYIIYDTLIENCSNNEFKSVVGLVK 365
L+INGL K R ++ L++ + M TS P+ Y++LI N
Sbjct: 1001 LIINGLGKSHRLEEA-----LVLFNEMKTSRGITPDLYTYNSLILN-------------- 1041
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+ G+V EA + ++ + +P+ +N LI + AY +Y MV GF
Sbjct: 1042 -LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 181/465 (38%), Gaps = 77/465 (16%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I++D TY I K + +++ LR M E G +A SY +I +R +A
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
E M +G P TYSSL+ L +R + L +EM + P+ TFT +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G+ ++A+ + +M +G PD V TY +I LC +++ A + M
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVV--------TYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
PD V+YI ++ F NR+L + EM++ + D T+
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD--------------GHVPDVVTF 366
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT--------- 323
L++A C G + D M +G LP+ + LI GL + R D
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 324 -----KAHLLLIIADYMYTS------------------MPNYIIYD----TLIENCSNNE 356
A+ ++ DY S PN + + +L + + E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 357 FKSV------VGLV----------KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIF 400
K + +GLV K +S G ++EA + M+E +PD V N LI
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ V +A+ M+M M + + LL L +G E
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/512 (18%), Positives = 184/512 (35%), Gaps = 110/512 (21%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ + TYN ++ ++++ + + GM +KG P+ +++ + C N A
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA---YHLFQEMLSP------------- 139
+ +M G +PD FTY+++I L ++ EA +H ++++ P
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV 688
Query: 140 ----------------------PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
P ++ + L+ + E A +++ G+ D
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 178 VT-----------------------------GFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ G P L TYN +I GL +E A +
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-- 266
+ G PD +Y ++ + ++ ++ + +EL EM + +T+ ++ GL
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA-NTITHNIVISGLVK 867
Query: 267 ---------------SDED------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
SD D TY LI+ G L++ L + M G P+
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
I ++LING K A ++ +++ + K+ LV
Sbjct: 928 IYNILINGFGKAGEADAACA------------------LFKRMVKEGVRPDLKTYSVLVD 969
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM-VRYGFV 424
M G V+E + E PD YNL+I + + +A ++ EM G
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQNTLRS 456
+++ +L+ L GM E + R+
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E ++ DL TY+ ++ C++ RV++G+ + + E GL+PD + Y +I G + +
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 94 AYEFKLEMD-QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
A EM +GI PD +TY+SLI L + EA ++ E+ P+ TF L+
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
L G+ A+ ++ M+ GFSP TY +
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMV--------TGGFSPNTGTYEQL 1108
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 194/469 (41%), Gaps = 73/469 (15%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D TYN I+K R+ +L M + GL P+ ++Y ++ G+C +A+
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ M Q +LPD TY+ LI LC+ + E L M S PD +T+ TL+ C
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT----------------------------GFSPA 184
G +A + QM + GV + VT GFSP
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+ TY+ +I +G + AL ++R M + G+ + ++ ++ C+ R+L +A+ L +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL-L 474
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYCAQ 282
K + +DEVTY L+ G E+ T+ SLI C
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
G+ + DE++ G LPD + +I G K+ R + +
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA------------------F 576
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
Y+ I++ + + L+ G+ +A +T++E + D YN +I
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAF 635
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
C+ + +AY++ EM G F+ + ++ L + G +E +++
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 202/472 (42%), Gaps = 62/472 (13%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL-RG 65
S ++ + F MV+ GV ++ T+N ++ +CL ++E +G+L R
Sbjct: 184 SISSAREVFDDMVKIGVSL-------------NVQTFNVLVNGYCLEGKLEDALGMLERM 230
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
++E ++PD ++Y ++ E L+M + G++P+ TY++L+ C
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L EA+ + + M PD T+ L++ C G + + M + PD V
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV---- 346
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
TYN +I G LG EA ++ M G+ + V++ I + C+ E R+A
Sbjct: 347 ----TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK-EEKREA--- 398
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
+ RKV +D M G S D TY +LI AY G+L L + EM KG
Sbjct: 399 ---VTRKVKELVD-------MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLL--------IIADYMYTSMPNYIIYDTLIENCS 353
+++ + +++ L K+ + + AH LL I+ + Y ++ + +E
Sbjct: 449 MNTITLNTILDALCKERKLDE--AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 354 N--NEFKSVV---------GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
+E K V L+ G A D + E PD + +N +I +
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
C+ V KA+ Y E +++ F ++ LL L GM E++ NTL
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM-TEKALNFFNTL 617
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ + T N I+ C +++++ +L ++G D ++Y +I GF K
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM + I P T++SLI LC + A F E+ PDD TF +++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C EG KAF +++ I F P +T N +++GLC G E+AL
Sbjct: 565 GYCKEGRVEKAFEFYNESIKH--------SFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
+ E D V+Y +IS FC++++L++AY+L EM+ K GL+ + Y
Sbjct: 617 LIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK---GLEPDRFTY 663
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 40/299 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE----KGLSPDALSYRYVITGFCNN 88
++ ++ + T+N +K C + EK + R + E G SPD ++Y +I +
Sbjct: 373 NDGVKANQVTHNISLKWLC---KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITF 145
A E EM QKGI + T ++++ ALC +R+L EA++L D++T+
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
TL+ E + KA M +M + +P + T+N++I GLC G+ E A+
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKI--------TPTVSTFNSLIGGLCHHGKTELAM 541
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+ E GL PD ++ +I G+C+ + KA+E E K + D T L+ G
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE-SIKHSFKPDNYTCNILLNG 600
Query: 266 LSDED---------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
L E TY ++I+A+C +L + L EM KG PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 138/352 (39%), Gaps = 71/352 (20%)
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------------- 179
PP F + A EG+ A + +MI + P+ +T
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 180 -----------GFSPALFTYNAIIHGLCFLGRVEEALGIL-RGMPEMGLSPDAVSYIIVI 227
G S + T+N +++G C G++E+ALG+L R + E ++PD V+Y ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
+ L EL ++M + GL + + TY +L+ YC G L +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKN---GL-----------VPNRVTYNNLVYGYCKLGSLKE 293
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
+ + M LPD ++LINGL + L L+ A P+ + Y+T
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGL---CNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 348 LIENC---------------SNNEFKSVVGLVKSFSMRGLVNEAARAHDTM-------LE 385
LI+ C N+ + + S++ L E R T +
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
G + PD Y+ LI + + ++ A M EM + G + ++ +L AL
Sbjct: 411 G-FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 51/199 (25%)
Query: 39 DLATYNKIIKQHCLMQRVEKGV-----------------------GILR-GMAEKGLS-- 72
D +T+N II +C RVEK G+ + GM EK L+
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 73 --------PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
D ++Y +I+ FC ++ +AY+ EM++KG+ PD FTY+S I L
Sbjct: 615 NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Query: 125 RLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
+LSE L ++ F ++ +E E + A + ++ +
Sbjct: 675 KLSETDELLKKFSG-----KFGSMKRDLQVETEKNPATSESKEELNTEAI---------- 719
Query: 185 LFTYNAIIHGLCFLGRVEE 203
Y+ +I LC GR++E
Sbjct: 720 --AYSDVIDELCSRGRLKE 736
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 26/290 (8%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+++ Y II C M E + +L M E + + Y +I C + A
Sbjct: 37 VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQ 96
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
EM KGI PD TYS +I + C R ++A L ++M+ PD +TF+ L++A
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
EG+ S+A ++ M+ +G+ P + TYN++I G C R+ +A +L M
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTI--------TYNSMIDGFCKQDRLNDAKRMLDSMA 208
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
SPD V++ +I+G+C+ + + E+ EM R+ + +++ TY
Sbjct: 209 SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI--------------VANTVTY 254
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV-IDSLLINGLDKKARTK 321
+LI+ +C G+L L + M G P+ + S+L + KK K
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ + I D+ TY+ +I C R +LR M E+ ++PD +++ +I
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A E +M ++GI P TY+S+I C + RL++A + M S PD +TF+TL
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ C + +M +G++ + V TY +IHG C +G ++ A +L
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTV--------TYTTLIHGFCQVGDLDAAQDLL 274
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
M G++P+ +++ +++ C +ELRKA+ +
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 46/296 (15%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD +TFTTLM+ C EG +A + +M+ +G P Y II+GLC +G
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP------------YGTIINGLCKMG 55
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
E AL +L M E + V Y +I C++ A L EM K ++
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIF------- 108
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
D TY+ +I+++C G L +M + PD V S LIN L K+ +
Sbjct: 109 -------PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 320 TKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
+ + I D + + P I Y+++I+ F + +N+A R
Sbjct: 162 VSEAEE----IYGDMLRRGIFPTTITYNSMID---------------GFCKQDRLNDAKR 202
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
D+M + PD ++ LI +C+ V ++ EM R G V++ + L+
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 145/331 (43%), Gaps = 48/331 (14%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGK---AYEFKLEMDQKGILPDAFTYSSLIQALCS 122
M E G PD +++ ++ G C C G+ A M ++G P Y ++I LC
Sbjct: 1 MVETGCRPDVVTFTTLMNGLC---CEGRVLQALALVDRMVEEGHQP----YGTIINGLCK 53
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
A +L +M + + ++ C +G A ++ +M KG+ PD +
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVI- 112
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TY+ +I C GR +A +LR M E ++PD V++ +I+ + ++ +A
Sbjct: 113 -------TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLIN 277
E+ +M R+ ++ +TY ++ G +D T+++LIN
Sbjct: 166 EEIYGDMLRRGIFPT-TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
YC + + + EM +G + ++V + LI+G + + L ++I+ +
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV-- 282
Query: 338 SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSF 367
PNYI + +++ + CS E + +++
Sbjct: 283 -APNYITFQSMLASLCSKKELRKAFAILEDL 312
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 184/444 (41%), Gaps = 81/444 (18%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC------- 86
+ + ++ TYN ++K C +V+ +L M+ KG PDA+SY VI+ C
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 87 -------------------NNRCP----GKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
N C A+E EM +KGI P+ +YS+LI LC+
Sbjct: 235 GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
++ A+ +ML P+ T ++L+ C L G A + +QMI +G G
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGF------G 347
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P + YN ++ G C G + +A+ + M E+G SP+ +Y +I+GF + L A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ +M L G + Y +++ A C + + +L + MS +
Sbjct: 408 YIWNKM---------------LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN-NEFK 358
P + I GL R A + + + PN + Y+ L++ + N +
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLD--WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGN--------------------YKPDGAVYNLL 398
GL + MRG V ++ ++T+L G+ PD N++
Sbjct: 511 EAYGLTREIFMRG-VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYG 422
I +C++ +A M +++V G
Sbjct: 570 ILAYCKQGKAERAAQM-LDLVSCG 592
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 125/298 (41%), Gaps = 38/298 (12%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC------QN 233
GF P +FTYN ++ LC +V+ A +L M G PDAVSY VIS C +
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 234 RELRKAYELKVEMDRKVVWGLD---------EVTYAYLMQGLS-DEDTYASLINAYCAQG 283
REL + +E V + ++ GL E+ + +G+S + +Y++LIN C G
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI 343
++ + +M +G P+ S L+ G + T D +I + PN +
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL--QPNVV 353
Query: 344 IYDTLIEN-CSNNEFKSVV-------------------GLVKSFSMRGLVNEAARAHDTM 383
Y+TL++ CS+ V L+ F+ RG ++ A + M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
L P+ VY ++ CR +A ++ M + + + A + L D G
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 118/295 (40%), Gaps = 37/295 (12%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P++ YN ++ L R++ + R M G P+ +Y +++ C+N ++ A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQ-----GLSDE------------DTYASLINAYCAQ 282
+L VEM K D V+Y ++ GL E Y +LIN C +
Sbjct: 201 KKLLVEMSNKGCCP-DAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKE 259
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
+ L EM KG P+ + S LIN L + + +A T M
Sbjct: 260 HDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---------LAFSFLTQM--- 307
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG-NYKPDGAVYNLLIFD 401
L C N + ++ LVK +RG +A + M+ G +P+ YN L+
Sbjct: 308 -----LKRGCHPNIY-TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRS 456
C N+ KA +++ M G ++ + +L+ G + ++ L S
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYEF 97
++ Y +++ C + ++ ++ M+++ +P ++ I G C+ R F
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCL 154
+ Q P+ TY+ L+ L R+ EAY L +E+ T+ TL+H C
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR--GMP 212
G A + +M+ V G SP T N II C G+ E A +L
Sbjct: 541 AGLPGIALQLVGKMM--------VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592
Query: 213 EMGLSPDAVSYIIVISGFCQN 233
PD +SY VI G C++
Sbjct: 593 RRKWRPDVISYTNVIWGLCRS 613
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 26/286 (9%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
D T+N +I+ C + + EK + +L M+ G PD ++Y +I GFC + KA E
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 98 KLEMDQKGIL-PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
++ + PD TY+S+I C ++ EA L +ML P ++TF L+
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
GE A + +MI G PD V T+ ++I G C +G+V + + M
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVV--------TFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ P+A +Y I+I+ C L KA EL ++ K D + ++ Y
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASK-----DIIPQPFM---------YN 421
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+I+ +C G++ + + +EM K PD + ++LI G K R
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 42/340 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMH 165
D T++ LI+ LC + +A L M PD +T+ TL+ C E +KA M
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+ V SP + TY ++I G C G++ EA +L M +G+ P V++ +
Sbjct: 265 KDVKSGSVC-------SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGEL 285
++ G+ + E+ A E++ +M + +G D T+ SLI+ YC G++
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKM---ISFGC-----------FPDVVTFTSLIDGYCRVGQV 363
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
+ L +EM+ +G P++ S+LIN L + R + L + + + +P +Y
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI---IPQPFMY 420
Query: 346 DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
+ +I+ F G VNEA + M + KPD + +LI HC +
Sbjct: 421 NPVID---------------GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ +A +++ +MV G +V +LL+ L GM E
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 25 CRFTAARNSESIQQDL---------ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDA 75
C+ R + S+ D+ T+N ++ + + I M G PD
Sbjct: 288 CKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV 347
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+++ +I G+C + + EM+ +G+ P+AFTYS LI ALC++ RL +A L +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
+ S P + ++ C G+ ++A + +M K PD + T+ +I
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI--------TFTILI 459
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
G C GR+ EA+ I M +G SPD ++ ++S + ++AY L ++ RK
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN-QIARK 515
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R N+ + + TY+ +I C R+ K +L +A K + P Y VI GF
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
C +A EM++K PD T++ LI C K R+ EA +F +M++ PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
IT ++L+ G +A+H+ +Q+ KG
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 107/293 (36%), Gaps = 41/293 (13%)
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL- 242
+ +TYN + LC G + A + M G+SP+ ++S F + +L A L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 243 ----KVEMDRKVVWG-------LDEVTYAYLM-------QGLSDEDTYASLINAYCAQGE 284
+VE VV LD V A + Q +D T+ LI C G+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
K L L MS G PD V + LI G K + KA + P+ +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS--NELNKASEMFKDVKSGSVCSPDVVT 279
Query: 345 YDTLIEN-CSNNEFKSVVG-------------------LVKSFSMRGLVNEAARAHDTML 384
Y ++I C + + LV ++ G + A M+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
PD + LI +CR V + + ++ EM G + F+ L+ AL
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 26/286 (9%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
D T+N +I+ C + + EK + +L M+ G PD ++Y +I GFC + KA E
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 98 KLEMDQKGIL-PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
++ + PD TY+S+I C ++ EA L +ML P ++TF L+
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
GE A + +MI G PD V T+ ++I G C +G+V + + M
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVV--------TFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ P+A +Y I+I+ C L KA EL ++ K D + ++ Y
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASK-----DIIPQPFM---------YN 421
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+I+ +C G++ + + +EM K PD + ++LI G K R
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 42/340 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMH 165
D T++ LI+ LC + +A L M PD +T+ TL+ C E +KA M
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+ V SP + TY ++I G C G++ EA +L M +G+ P V++ +
Sbjct: 265 KDVKSGSVC-------SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGEL 285
++ G+ + E+ A E++ +M + +G D T+ SLI+ YC G++
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKM---ISFGC-----------FPDVVTFTSLIDGYCRVGQV 363
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
+ L +EM+ +G P++ S+LIN L + R + L + + + +P +Y
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI---IPQPFMY 420
Query: 346 DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
+ +I+ F G VNEA + M + KPD + +LI HC +
Sbjct: 421 NPVID---------------GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ +A +++ +MV G +V +LL+ L GM E
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 25 CRFTAARNSESIQQDL---------ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDA 75
C+ R + S+ D+ T+N ++ + + I M G PD
Sbjct: 288 CKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV 347
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+++ +I G+C + + EM+ +G+ P+AFTYS LI ALC++ RL +A L +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
+ S P + ++ C G+ ++A + +M K PD + T+ +I
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI--------TFTILI 459
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
G C GR+ EA+ I M +G SPD ++ ++S + ++AY L ++ RK
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN-QIARK 515
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R N+ + + TY+ +I C R+ K +L +A K + P Y VI GF
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
C +A EM++K PD T++ LI C K R+ EA +F +M++ PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
IT ++L+ G +A+H+ +Q+ KG
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 107/293 (36%), Gaps = 41/293 (13%)
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL- 242
+ +TYN + LC G + A + M G+SP+ ++S F + +L A L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 243 ----KVEMDRKVVWG-------LDEVTYAYLM-------QGLSDEDTYASLINAYCAQGE 284
+VE VV LD V A + Q +D T+ LI C G+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
K L L MS G PD V + LI G K + KA + P+ +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS--NELNKASEMFKDVKSGSVCSPDVVT 279
Query: 345 YDTLIEN-CSNNEFKSVVG-------------------LVKSFSMRGLVNEAARAHDTML 384
Y ++I C + + LV ++ G + A M+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
PD + LI +CR V + + ++ EM G + F+ L+ AL
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 26/288 (9%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
QDLA++N I+ C +RVEK + R + + S D ++Y ++ G+C + KA E
Sbjct: 159 QDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEV 217
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCL 154
EM ++GI P+ TY+++++ ++ A+ F EM D +T+TT++H +
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
GE +A ++ +MI +GVLP ++ TYNA+I LC VE A+ + M
Sbjct: 278 AGEIKRARNVFDEMIREGVLP--------SVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G P+ +Y ++I G E + EL M+ + G + + TY
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE---GCE-----------PNFQTYNM 375
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+I Y E+ K L L ++M LP+ ++LI+G+ + R++D
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 49/247 (19%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F A R S+ D TYN I+ CL++R K + +L+ M E+G++P+ +Y ++ GF
Sbjct: 184 FRALRGRFSV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 87 NNRCPGKAYEFKLEMDQK-----------------------------------GILPDAF 111
A+EF LEM ++ G+LP
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
TY+++IQ LC K + A +F+EM+ P+ T+ L+ GEFS+ + +M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
++G P+F TYN +I VE+ALG+ M P+ +Y I+IS
Sbjct: 362 ENEGCEPNFQ--------TYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Query: 229 G-FCQNR 234
G F + R
Sbjct: 414 GMFVRKR 420
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 42/331 (12%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
+ P ++ V + + P KA + L M + G D ++++++ LC +R+ +AY
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 131 HLFQEMLS--PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
LF+ + D +T+ +++ CL KA + +M+ +G+ +P L TY
Sbjct: 182 ELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI--------NPNLTTY 233
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N ++ G G++ A M + D V+Y V+ GF E+++A + EM R
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ V L TY ++I C + + + + +EM +G P+ +
Sbjct: 294 EGV--------------LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFS 368
+LI GL + + M N E C N F++ +++ +S
Sbjct: 340 VLIRGLFHAGEFSR---------GEELMQRMEN--------EGCEPN-FQTYNMMIRYYS 381
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
V +A + M G+ P+ YN+LI
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 22 GVVCRFTAARN------SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDA 75
GV ARN E + +ATYN +I+ C VE V + M +G P+
Sbjct: 276 GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNV 335
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+Y +I G + + E M+ +G P+ TY+ +I+ + +A LF++
Sbjct: 336 TTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Query: 136 MLS 138
M S
Sbjct: 396 MGS 398
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 182/440 (41%), Gaps = 73/440 (16%)
Query: 1 MKLLRDSFTATL-------KTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQH 50
+++ DSF + + K F + G V F + I+ ++ YN ++ H
Sbjct: 435 LEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH 494
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
C M+ ++ I M EKGL P+ +Y +I GF N+ A++ +M+ +
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSPP----DDITFTTLMHACCLEGEFSKAFHMHH 166
Y+++I LC + S+A + Q ++ ++ +++ G+ A +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
+M G SP + T+ ++I+G C R++ AL + M M L D +Y +
Sbjct: 615 EMSENGK--------SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 227 ISGFCQNRELRKAYELKVEMDR-----------------KVVWGLDEVTYAY---LMQGL 266
I GFC+ +++ AY L E+ + + +D Y + G+
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 267 S-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
S D TY ++I+ G + L E+ G +PD ++ +L+NGL KK +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ------ 780
Query: 326 HLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+ A M M PN ++Y T+I G +NEA R
Sbjct: 781 ---FLKASKMLEEMKKKDVTPNVLLYSTVI---------------AGHHREGNLNEAFRL 822
Query: 380 HDTMLEGNYKPDGAVYNLLI 399
HD MLE D V+NLL+
Sbjct: 823 HDEMLEKGIVHDDTVFNLLV 842
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
+YN II + + V R M+E G SP+ +++ +I GFC + A E E
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M + D Y +LI C K + AY LF E+ P+ + +L+ G+
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A ++ +M++ G+ D LFTY +I GL G + A + + ++G+
Sbjct: 711 MDAAIDLYKKMVNDGISCD--------LFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD + ++++++G + + KA ++ EM +K +VT L+ Y+++I
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKK------DVTPNVLL--------YSTVIA 808
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+ +G L + L DEM KG + D + +LL++G
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 176/459 (38%), Gaps = 54/459 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I + ++ +C + K + + M E+GL+PD + + ++ FC N KA
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITF--TTLMHACC 153
EF + M I P + ++IQ A +F + F + C
Sbjct: 401 EFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFC 460
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G+ A M KG+ P+ V YN ++ C + ++ A I M E
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVV--------FYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE---- 269
GL P+ +Y I+I GF +N++ + A+++ +M+ + +EV Y ++ GL
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS-NFEANEVIYNTIINGLCKVGQTS 571
Query: 270 -------------------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+Y S+I+ + G+ + EMS G P+ V + L
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSM 369
ING K R + + + +P Y LI+ C N+ K+ L
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLP---AYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
GL+ P+ +VYN LI + A ++Y +MV G +F+
Sbjct: 689 LGLM----------------PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFT 732
Query: 430 VLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
++ L G N S + L + D LH VL
Sbjct: 733 YTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 161/408 (39%), Gaps = 64/408 (15%)
Query: 44 NKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ 103
N ++ +++ I M G++ D ++ + ++ R P +A + +
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLMHACCLEGEFS 159
+G PD +S +QA C L A L +EM P T+T+++ A EG
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+A + +M+ G+ + S +++G C + +AL + M E GL+PD
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATS--------LVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDE--------- 269
V + +++ FC+N E+ KA E + M + V V ++QG L E
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRM-KSVRIAPSSVLVHTMIQGCLKAESPEAALEIF 438
Query: 270 -DTYASLIN----------AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
D++ S I +C QG++ + M KG P+ V + N +
Sbjct: 439 NDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN---NMMLAHC 495
Query: 319 RTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
R K+ + +A +++ M PN Y LI+ N+ +
Sbjct: 496 RMKN------MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ------------- 536
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
A + M N++ + +YN +I C+ KA M +++
Sbjct: 537 --NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 171/416 (41%), Gaps = 69/416 (16%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I ++ +YN ++ HC + ++ + + EKGL P+ +Y +I G N
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP----DDITFTTL 148
A E M I + Y ++I LC + S+A L M+ +++ ++
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ EGE A + +M G+ SP + TY ++++GLC R+++AL +
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGI--------SPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD--EVTYAYLMQGL 266
M G+ D +Y +I GFC+ + A L E+ + GL+ + Y L+ G
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE---GLNPSQPIYNSLISGF 699
Query: 267 S----------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
D TY +LI+ G L L EM G +PD
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFK 358
+I ++++NGL KK + + M+ M PN +IY+ +I
Sbjct: 760 IIYTVIVNGLSKKGQ---------FVKVVKMFEEMKKNNVTPNVLIYNAVI--------- 801
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
G ++EA R HD ML+ PDGA +++L+ L +A ++
Sbjct: 802 ------AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 183/463 (39%), Gaps = 71/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I ++ +I HC + + + M ++G SP+++++ +I F N
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITF--TTLMH 150
KA EF +M+ G+ P F ++IQ ++ EA LF E F T++
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS 451
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
C +G+ +A + +M +G+ P+ V+ G P
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 184 ALFTYNAIIHGLCFLGRVEE-ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+TY+ +I G CF E+ AL ++ M + + V Y +I+G C+ + KA EL
Sbjct: 512 NNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYC 280
M + + ++Y ++ G E TY SL+N C
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
+ + L + DEM +KG D LI+G K++ + A ++ + + S P
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 341 NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIF 400
IY++LI F+++ +V + + + ML+ + D Y LI
Sbjct: 691 ---IYNSLISG-----FRNLGNMVAALDL----------YKKMLKDGLRCDLGTYTTLID 732
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMY 443
+ N+ A +Y EM G V ++ L G +
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 113/529 (21%), Positives = 187/529 (35%), Gaps = 128/529 (24%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
R+S T + + MV GV D T +++ ++ + + +L
Sbjct: 211 RNSLTEAKELYSRMVAIGV-------------DGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGI-LPDAFTYSSLIQALCSK 123
E+G PD+L Y + C A EM +K + +P TY+S+I A +
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 124 RRLSEAYHLFQEMLS--------------------------------------PPDDITF 145
+ +A L EMLS P+ +TF
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLP---------------------------DFV 178
+ L+ GE KA + +M G+ P F
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
TG + +F N I+ LC G+ +EA +L M G+ P+ VSY V+ G C+ + +
Sbjct: 438 TGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 239 AYELKVEMDRKVVWGL--DEVTYAYLMQGL---SDEDT-------------------YAS 274
A ++ + GL + TY+ L+ G DE Y +
Sbjct: 497 A---RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVID-SLLINGLDKKARTKDTKAHLLLIIAD 333
+IN C G+ K L M + L S + + +I+G K+ A + +
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 334 YMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ PN I Y +L+ C NN +++A D M K D
Sbjct: 614 GIS---PNVITYTSLMNGLCKNNR----------------MDQALEMRDEMKNKGVKLDI 654
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
Y LI C+R N+ A ++ E++ G +L++ R+ G
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 189/429 (44%), Gaps = 51/429 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T N +++ + +E + M+ +G+ PD+ SY+ ++ G + +A + M
Sbjct: 184 TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM 243
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
Q+G +PD T + ++ ALC ++ A F++M+ P+ I FT+L+ C +G
Sbjct: 244 IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI-LRGMPEMGLS 217
+AF M +M+ G+ P ++T+ A+I GLC G E+A + L+ +
Sbjct: 304 KQAFEMLEEMVR--------NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLI 276
P+ +Y +I G+C+ +L +A L M QGL + +TY +LI
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE---------------QGLFPNVNTYTTLI 400
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
N +C G + L + M +G +P+ + I+ L KK+R + A+ LL A +
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE--AYELLNKA-FSC 457
Query: 337 TSMPNYIIYDTLI-ENCSNNEFKSVVG-------------------LVKSFSMRGLVNEA 376
+ + Y LI E C N+ + L+ +F + + E+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
R ++ P Y +I +C+ ++ A + M R+G V F+ +L++
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 437 LRDHGMYNE 445
L M +E
Sbjct: 578 LCKKSMVDE 586
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 166/389 (42%), Gaps = 44/389 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D AT I+ C V + + R M + G P+ +++ +I G C +A+E
Sbjct: 251 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 310
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCL 154
EM + G P+ +T+++LI LC + +A+ LF +++ P+ T+T+++ C
Sbjct: 311 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
E + ++A + +M +G+ P+ + TY +I+G C G A ++ M +
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPN--------VNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G P+ +Y I C+ +AYEL +++ GL+ +D TY
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYEL---LNKAFSCGLE-----------ADGVTYTI 468
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI C Q ++ + L M+ G D ++++LI ++ + K+++ L+++
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ + Y ++ + G ++ A + M PD
Sbjct: 529 LIPTKETY------------------TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
Y LI C++ V +A +Y M+ G
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S++ + ++ TY +I +C ++ + + M E+GL P+ +Y +I G C G
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+AYE M +G +P+ +TY++ I +LC K R EAY L + S D +T+T L+
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C + + ++A +M TGF + N +I C +++E+ + +
Sbjct: 471 QEQCKQNDINQALAFFCRMNK--------TGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ +GL P +Y +IS +C+ ++ A + M R + D
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC--------------VPDS 568
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
TY SLI+ C + + + L + M +G P V
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEV 604
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 147/355 (41%), Gaps = 53/355 (14%)
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
++M +G+ P + T + +++ + A ++F EM PD ++ ++ C +
Sbjct: 171 MDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRD 230
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A MI +G +PD T I+ LC G V A+ R M ++G
Sbjct: 231 GKIQEADRWLTGMIQRGFIPDNATC--------TLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
P+ +++ +I G C+ +++A+E+ EM R W + T+ L+ GL
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN-GWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 271 ------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
TY S+I YC + +L + L M +G P+ + LIN
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
G KA + L+ ++ D + MPN Y+ I+ S +
Sbjct: 402 G-HCKAGSFGRAYELMNLMGDEGF--MPNIYTYNAAID---------------SLCKKSR 443
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
EA + + DG Y +LI + C++ ++++A + M + GF + M
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 12/222 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E ++ TYN I C R + +L GL D ++Y +I C +
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A F M++ G D + LI A C ++++ E+ LFQ ++S P T+T+++
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C EG+ A H M G +PD FTY ++I GLC V+EA +
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDS--------FTYGSLISGLCKKSMVDEACKLYEA 593
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
M + GLSP V+ + + +C+ + A L +D+K +W
Sbjct: 594 MIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK-LW 634
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F N + D+ N +I C +++++ + + + GL P +Y +I+ +C
Sbjct: 485 FFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYC 544
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDD 142
A ++ M + G +PD+FTY SLI LC K + EA L++ M LSPP +
Sbjct: 545 KEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP-E 603
Query: 143 ITFTTLMHACCLEGEFSKA 161
+T TL + C + + A
Sbjct: 604 VTRVTLAYEYCKRNDSANA 622
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/536 (21%), Positives = 210/536 (39%), Gaps = 117/536 (21%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+ +++ +C +KG+ +L M G+ P+ + Y +++ FC + + +M
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM-------LSPPDDITFTTLMHACC- 153
++G++PD T++S I ALC + ++ +A +F +M L P+ IT+ ++ C
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 154 ---LE-------------------------------GEFSKAFHMHHQMIHKGVLPDFVT 179
LE G+F +A + QM KG+
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI------ 357
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
P++++YN ++ GLC LG + +A I+ M G+ PDAV+Y ++ G+C ++ A
Sbjct: 358 --GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 240 YELKVEMDRK--------------VVWGLDEVTYAYLMQGLSDEDTYA-------SLINA 278
L EM R +W + ++ A + +E Y +++
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 279 YCAQGELFKVLTL-----------------------DDEMSHKGSLPDSVIDSLLINGLD 315
C GEL K + + DD + LPD + S L+NGL
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMR---- 370
K R + K ++ + + P+ + Y+ I + C + S ++K +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKL---QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 371 ------------GLVNEAARAH---DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
G+ N+ H D M E P+ YN I C V A N+
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEI 471
EM++ ++FS L+ A ++ V + + C + + NE+
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNEL 708
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 179/441 (40%), Gaps = 68/441 (15%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +++ +RVE + + M G++P ++ +I C++ C A E EM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
+KG P+ FT+ L++ C + L M S P+ + + T++ + C EG
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 160 KAFHMHHQMIHKGVLPDFVTGFS-------------------------------PALFTY 188
+ M +M +G++PD VT S P TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N ++ G C +G +E+A + + E SY I + G ++ + +A + +M
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 249 KVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGELF 286
K + G +Y LM GL D TY L++ YC+ G++
Sbjct: 355 KGI-GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD-YMYTSMPNYIIY 345
+L EM LP++ ++L++ L K R + + L + Y ++ II
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 346 DTLIENCSNNEFKSVVGLVKSFSMRG------LVNE-AARAHDTMLEGNYKPDGAVYNLL 398
D L C + E + +VK + G L N D+++E N PD Y+ L
Sbjct: 474 DGL---CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 399 IFDHCRRLNVHKAYNMYMEMV 419
+ C+ +A N++ EM+
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMM 551
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 37/336 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I + +YN ++ C + + I+ M G+ PDA++Y ++ G+C+
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMH 150
A EM + LP+A+T + L+ +L R+SEA L ++M D +T ++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 151 ACCLEGEFSKAFHMHHQM-IHK----GVLPDFVTGFS----------PALFTYNAIIHGL 195
C GE KA + M +H G L + G P L TY+ +++GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD 255
C GR EA + M L PD+V+Y I I FC+ ++ A+ + +M++K
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH--- 591
Query: 256 EVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
+TY SLI + ++F++ L DEM KG P+ + I L
Sbjct: 592 -----------KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 316 KKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIE 350
+ + +D ++ + M ++ PN + LIE
Sbjct: 641 EGEKVEDATN----LLDEMMQKNIAPNVFSFKYLIE 672
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 119/298 (39%), Gaps = 36/298 (12%)
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
F+K+ H+ ++ P+++ YN ++ RVE + + M G++
Sbjct: 85 FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIA 144
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
P ++ ++I C + + A EL EM K +E T+ L+
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGC--------------KPNEFTFGILVR 190
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
YC G K L L + M G LP+ VI + +++ ++ R D++ + + + +
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL-- 248
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY----KPDGA 393
+P+ + +++ I + G V +A+R M Y +P+
Sbjct: 249 -VPDIVTFNSRI---------------SALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
YNL++ C+ + A ++ + ++ + S L L HG + E V++
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK 350
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 191/488 (39%), Gaps = 86/488 (17%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ + +L TYN +IK C + EK G L M ++G PD SY VI
Sbjct: 142 TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTL 148
A E EM ++G+ PD Y+ LI ++ A L+ +L P+ T +
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ G + +M D L+TY+++IHGLC G V++A +
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKD--------LYTYSSLIHGLCDAGNVDKAESVF 313
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK------------------- 249
+ E S D V+Y ++ GFC+ +++++ EL M+ K
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENG 373
Query: 250 ------VVWGL--------DEVTYAYLMQGLS----------------------DEDTYA 273
++W L D+ TY + GL D YA
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
S+I+ C + L + L EMS G +S + + LI GL + +R + L + +
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
P + Y+ LI GL K+ G EA+ MLE +KPD
Sbjct: 494 ---GCRPTVVSYNILI-----------CGLCKA----GKFGEASAFVKEMLENGWKPDLK 535
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNT 453
Y++L+ CR + A ++ + ++ G + + L+ L G ++ V+ N
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 454 L-RSCNLN 460
R+C N
Sbjct: 596 EHRNCTAN 603
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 34/318 (10%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ +YN +IK ++++ I R M KG + D +Y I G C N KA
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACCLE 155
E++ G D + Y+S+I LC K+RL EA +L +EM ++ L+ +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+A +M G P V +YN +I GLC G+ EA ++ M E G
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVV--------SYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYAS 274
PD +Y I++ G C++R++ A EL W + +L GL +D +
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALEL---------W------HQFLQSGLETDVMMHNI 574
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI+ C+ G+L +T+ M H+ + V + L+ G K + +I Y
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT-----VIWGY 629
Query: 335 MYTS--MPNYIIYDTLIE 350
MY P+ I Y+T+++
Sbjct: 630 MYKMGLQPDIISYNTIMK 647
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
R+ + LR M + G P +SY +I G C G+A F EM + G PD TY
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
S L+ LC R++ A L+ + L D + L+H C G+ A + M H
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+ + VT YN ++ G +G A I M +MGL PD +SY ++ G
Sbjct: 598 RNCTANLVT--------YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 231 CQNRELRKAYEL 242
C R + A E
Sbjct: 650 CMCRGVSYAMEF 661
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 25/229 (10%)
Query: 3 LLRDSFTATLKTF-RHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVG 61
L+RDS F R M +NG CR T + +YN +I C + +
Sbjct: 474 LIRDSRLGEASFFLREMGKNG--CRPT-----------VVSYNILICGLCKAGKFGEASA 520
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
++ M E G PD +Y ++ G C +R A E + Q G+ D ++ LI LC
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 122 SKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
S +L +A + M + +T+ TLM G+ ++A + M G+ PD +
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+YN I+ GLC V A+ G+ P ++ I++
Sbjct: 641 --------SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 178/405 (43%), Gaps = 46/405 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY+ ++ C Q++E V LR K + P +S+ +++G+C A F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ G++P ++++ LI LC ++EA L +M PD +T+ L L G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
S A+ + M+ KG+ PD + TY ++ G C LG ++ L +L+ M G
Sbjct: 309 SGAWEVIRDMLDKGLSPDVI--------TYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 219 DA-VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLI 276
++ + +++SG C+ + +A L +M GLS D Y+ +I
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMK---------------ADGLSPDLVAYSIVI 405
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ C G+ L L DEM K LP+S L+ GL +K + ++ L +I+
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS--- 462
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
+ ++Y+ +I+ G KS G + EA ++E P A +N
Sbjct: 463 GETLDIVLYNIVID-----------GYAKS----GCIEEALELFKVVIETGITPSVATFN 507
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
LI+ +C+ N+ +A + + YG + S L+ A + G
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 74/452 (16%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N ++ D TYN + K L+ + ++R M +KGLSPD ++Y ++ G C
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 92 GKAYEFKLEMDQKGI-LPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTT 147
+M +G L S ++ LC R+ EA LF +M + PD + ++
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPD---------------------------FVTG 180
++H C G+F A ++ +M K +LP+ +G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+ + YN +I G G +EEAL + + + E G++P ++ +I G+C+ + + +A
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
++ +D ++GL +Y +L++AY G + L EM +G
Sbjct: 524 KI---LDVIKLYGLAPSVV-----------SYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM---------PNYIIYDTLIE- 350
P +V S++ GL + + ++ L I + + P+ I Y+T+I+
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 351 -----------------NCSNNEFKSVVG--LVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
N + S L+ S + G + +A ++ E N
Sbjct: 630 LCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLS 689
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
Y LI HC + + A ++ +++ GF
Sbjct: 690 KFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 161/383 (42%), Gaps = 46/383 (12%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
C R+++ + + M GLSPD ++Y VI G C A EM K ILP++
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 433
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQ 167
T+ +L+ LC K L EA L ++S D + + ++ G +A +
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+I TG +P++ T+N++I+G C + EA IL + GL+P VSY ++
Sbjct: 494 VIE--------TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL-------INAYC 280
+ + EL+ EM + + + VTY+ + +GL + + I C
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTN-VTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK--------------KARTKDTKAH 326
QG L D M +G PD + + +I L + K+R D +
Sbjct: 605 KQG-------LRD-MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 327 LLLIIAD----YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
I+ D Y Y + IY +N S ++F + L+K+ ++G A +
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF-AYTTLIKAHCVKGDPEMAVKLFHQ 715
Query: 383 MLEGNYKPDGAVYNLLIFDHCRR 405
+L + Y+ +I CRR
Sbjct: 716 LLHRGFNVSIRDYSAVINRLCRR 738
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 179/406 (44%), Gaps = 48/406 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY+ ++ C Q++E V LR K + P +S+ +++G+C A F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ G++P ++++ LI LC ++EA L +M PD +T+ L L G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
S A+ + M+ KG+ PD + TY ++ G C LG ++ L +L+ M G
Sbjct: 309 SGAWEVIRDMLDKGLSPDVI--------TYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 219 DA-VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDEDTYASL 275
++ + +++SG C+ + +A L +M GL D V Y+ ++ GL
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD---GLSPDLVAYSIVIHGL--------- 408
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
C G+ L L DEM K LP+S L+ GL +K + ++ L +I+
Sbjct: 409 ----CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS-- 462
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+ ++Y+ +I+ G KS G + EA ++E P A +
Sbjct: 463 -GETLDIVLYNIVID-----------GYAKS----GCIEEALELFKVVIETGITPSVATF 506
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
N LI+ +C+ N+ +A + + YG + S L+ A + G
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 74/452 (16%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N ++ D TYN + K L+ + ++R M +KGLSPD ++Y ++ G C
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 92 GKAYEFKLEMDQKGI-LPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTT 147
+M +G L S ++ LC R+ EA LF +M + PD + ++
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPD---------------------------FVTG 180
++H C G+F A ++ +M K +LP+ +G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+ + YN +I G G +EEAL + + + E G++P ++ +I G+C+ + + +A
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
++ +D ++GL +Y +L++AY G + L EM +G
Sbjct: 524 KI---LDVIKLYGLAPSVV-----------SYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM---------PNYIIYDTLIE- 350
P +V S++ GL + + ++ L I + + P+ I Y+T+I+
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 351 -----------------NCSNNEFKSVVG--LVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
N + S L+ S + G + +A ++ E N
Sbjct: 630 LCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLS 689
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
Y LI HC + + A ++ +++ GF
Sbjct: 690 KFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 161/383 (42%), Gaps = 46/383 (12%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
C R+++ + + M GLSPD ++Y VI G C A EM K ILP++
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 433
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQ 167
T+ +L+ LC K L EA L ++S D + + ++ G +A +
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+I TG +P++ T+N++I+G C + EA IL + GL+P VSY ++
Sbjct: 494 VIE--------TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL-------INAYC 280
+ + EL+ EM + + + VTY+ + +GL + + I C
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTN-VTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK--------------KARTKDTKAH 326
QG L D M +G PD + + +I L + K+R D +
Sbjct: 605 KQG-------LRD-MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 327 LLLIIAD----YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
I+ D Y Y + IY +N S ++F + L+K+ ++G A +
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF-AYTTLIKAHCVKGDPEMAVKLFHQ 715
Query: 383 MLEGNYKPDGAVYNLLIFDHCRR 405
+L + Y+ +I CRR
Sbjct: 716 LLHRGFNVSIRDYSAVINRLCRR 738
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 177/434 (40%), Gaps = 64/434 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L+TYN +I C +++ + M + GL P+ + ++ C ++ +A
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EMD K PD T+ SLI L R+ +AY ++++ML + I +T+L+
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 156 GEFSKAFHMHHQMIHKGVLPD-----------FVTG----------------FSPALFTY 188
G ++ MI++ PD F G F P +Y
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+ +IHGL G E + M E G D +Y IVI GFC+ ++ KAY+L EM
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
K G + TY S+I+ L + L +E K + VI S
Sbjct: 616 K---GFEPTVV-----------TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSF 367
LI+G K R + LI+ + M + PN +++L++ LVK+
Sbjct: 662 SLIDGFGKVGRIDEA----YLILEELMQKGLTPNLYTWNSLLD-----------ALVKAE 706
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
+NEA +M E P+ Y +LI C+ +KA+ + EM + G
Sbjct: 707 E----INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 428 FSVLALLTALRDHG 441
S +++ L G
Sbjct: 763 ISYTTMISGLAKAG 776
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 25/261 (9%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M E+G D +Y VI GFC KAY+ EM KG P TY S+I L R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 126 LSEAYHLFQEMLSPPDD---ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L EAY LF+E S + + +++L+ G +A+ + +++ KG+ P+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN------ 691
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
L+T+N+++ L + EAL + M E+ +P+ V+Y I+I+G C+ R+ KA+
Sbjct: 692 --LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
EM ++ G+ T +Y ++I+ G + + L D G +P
Sbjct: 750 WQEMQKQ---GMKPSTI-----------SYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 303 DSVIDSLLINGLDKKARTKDT 323
DS + +I GL R D
Sbjct: 796 DSACYNAMIEGLSNGNRAMDA 816
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 172/432 (39%), Gaps = 70/432 (16%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+ +I+ RV+ + +L M L D + Y I F A++F E++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFS 159
G+ PD TY+S+I LC RL EA +F+ + P + T++ G+F
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 160 KAFHMHHQMIHKGVLPDFVT--------------------------GFSPALFTYNAIIH 193
+A+ + + KG +P + +P L TYN +I
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 194 GLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG 253
LC G+++ A + M + GL P+ + I++ C++++L +A + EMD KV
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 254 LDEVTYAYLMQGLS----------------DED------TYASLINAYCAQGELFKVLTL 291
DE+T+ L+ GL D D Y SLI + G +
Sbjct: 446 -DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
+M ++ PD + + ++ + K + +A I A +P+ Y LI
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF---VPDARSYSILIH- 560
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
GL+K+ G NE +M E D YN++I C+ V+KA
Sbjct: 561 ----------GLIKA----GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 412 YNMYMEMVRYGF 423
Y + EM GF
Sbjct: 607 YQLLEEMKTKGF 618
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I+ ++ Y+ +I + R+++ IL + +KGL+P+ ++ ++
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A M + P+ TY LI LC R+ ++A+ +QEM P I++TT++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
G ++A + + G +PD YNA+I GL R +A +
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSA--------CYNAMIEGLSNGNRAMDAFSLFE 821
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GL + ++++ +N L +A
Sbjct: 822 ETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 129/335 (38%), Gaps = 46/335 (13%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
EM G P T ++ +L E Y + Q M P +TTL+ G
Sbjct: 123 EMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLI------G 176
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
FS H + + + G+ P + + +I G GRV+ AL +L M L
Sbjct: 177 AFSAVNHSDMMLTLFQQMQEL--GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASL 275
D V Y + I F + ++ A++ E++ GL DE TY S+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIE---------------ANGLKPDEVTYTSM 279
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I C L + + + + + +P + + +I G + + + L+
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS---LLERQRA 336
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
S+P+ I Y NC ++ G V+EA + + M + + P+ + Y
Sbjct: 337 KGSIPSVIAY-----NC----------ILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTY 380
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
N+LI CR + A+ + M + G ++ +V
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 49/384 (12%)
Query: 60 VGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
+ + + E P Y I GK E M I P F Y+ LI
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 120 LCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
LC +R+++A LF EML+ P IT+ TL+ C G K+F + +M +
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI--- 280
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
P+L T+N ++ GL G VE+A +L+ M ++G PDA ++ I+ G+ N +
Sbjct: 281 -----EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 237 RKA---YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
A YE V+ K+ AY T + L+NA C +G++ K +
Sbjct: 336 EAALGVYETAVDSGVKM--------NAY---------TCSILLNALCKEGKIEKAEEILG 378
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCS 353
KG +P+ VI + +I+G R D + I A P+++ Y NC
Sbjct: 379 REMAKGLVPNEVIYNTMIDGY---CRKGDLVGARMKIEAMEKQGMKPDHLAY-----NC- 429
Query: 354 NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
L++ F G + A + + M P YN+LI + R+ K ++
Sbjct: 430 ---------LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 414 MYMEMVRYGFVSHMFSVLALLTAL 437
+ EM G + ++ S L+ L
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCL 504
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 172/397 (43%), Gaps = 49/397 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I+ L T+N ++K VE +L+ M + G PDA ++ + G+ +N
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
A G+ +A+T S L+ ALC + ++ +A + ++ P+++ + T++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C +G+ A M +G+ PD + YN +I C LG +E A +
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHL--------AYNCLIRRFCELGEMENAEKEVN 448
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G+SP +Y I+I G+ + E K +++ EM+ D T ++
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME-------DNGTMPNVV------ 495
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
+Y +LIN C +L + + +M +G P I ++LI+G K + +D
Sbjct: 496 -SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 330 IIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE---G 386
++ + N + Y+TLI+ SM G ++E A D +LE
Sbjct: 555 MLKKGIEL---NLVTYNTLID---------------GLSMTGKLSE---AEDLLLEISRK 593
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
KPD YN LI + NV + +Y EM R G
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 156/379 (41%), Gaps = 86/379 (22%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
A + ++ D YN +I++ C + +E + M KG+SP +Y +I G+
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITF 145
K ++ EM+ G +P+ +Y +LI LC +L EA + ++M +SP I +
Sbjct: 474 EFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI-Y 532
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
L+ CC +G+ AF +M+ KG+ + VT
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMP-------------------------- 212
G P +FTYN++I G F G V+ + + M
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652
Query: 213 -----EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-- 265
EM L PD + Y V+ + + ++ KA+ L+ +M K + GLD+ TY L+ G
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI-GLDKTTYNSLILGQL 711
Query: 266 ----------LSDE----------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
L DE DTY ++ +C + EM KG L D
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771
Query: 306 IDSLLINGLDKKARTKDTK 324
I + L++GL ++ R+K+ +
Sbjct: 772 IGNELVSGLKEEWRSKEAE 790
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 19/276 (6%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG- 84
RF+ + I+ +L TYN +I + ++ + +L ++ KGL PD +Y +I+G
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 85 -FCNN--RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPD 141
F N RC YE EM + GI P TY LI +LC+K + LF EM PD
Sbjct: 610 GFAGNVQRCIA-LYE---EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPD 664
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV 201
+ + ++H + G+ KAF++ QMI K + D T YN++I G +G++
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT--------YNSLILGQLKVGKL 716
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
E ++ M + P+A +Y I++ G C+ ++ AY EM K LD
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL-LDVCIGNE 775
Query: 262 LMQGLSDE-DTYASLINAYCAQGELFKVLTLDDEMS 296
L+ GL +E + + I G + +T+D+++S
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLS 811
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 170/434 (39%), Gaps = 64/434 (14%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y K I+ + V KG+ + M + P Y +I G C + A + EM
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
+ +LP TY++LI C +++ + + M + P ITF TL+ G
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 160 KAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAII 192
A ++ +M G +PD T G +T + ++
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
+ LC G++E+A IL GL P+ V Y +I G+C+ +L A +K+E K
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEK--- 417
Query: 253 GLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
QG+ D Y LI +C GE+ ++M KG P ++LI
Sbjct: 418 -----------QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
G +K D +L + D +MPN + Y TLI NC L K +
Sbjct: 467 GGYGRKYEF-DKCFDILKEMED--NGTMPNVVSYGTLI-NC----------LCKGSKLL- 511
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
EA M + P +YN+LI C + + A+ EM++ G ++ +
Sbjct: 512 ---EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 432 ALLTALRDHGMYNE 445
L+ L G +E
Sbjct: 569 TLIDGLSMTGKLSE 582
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 44/348 (12%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
FK + GI P+ FT + L++ALC K + AY + E+ S P+ +T+TT++
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ A + +M+ +G PD TY ++ G C LGR EA ++ M +
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDAT--------TYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+ P+ V+Y ++I C+ ++ +A + EM + + D
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF--------------MPDSSLCC 335
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+I+A C ++ + L +M +PD+ + S LI+ L K+ R + + + +
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK----LFDE 391
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ S+P+ + Y+TLI G+ + +G + EA R D M E KP+
Sbjct: 392 FEKGSIPSLLTYNTLI-----------AGMCE----KGELTEAGRLWDDMYERKCKPNAF 436
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
YN+LI + NV + + EM+ G + + L L L+ G
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TY ++ +C + R + ++ M + + P+ ++Y +I C + G+A
Sbjct: 260 DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMF 319
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM ++ +PD+ +I ALC ++ EA L+++ML PD+ +TL+H C E
Sbjct: 320 DEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKE 379
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G ++A + + +F G P+L TYN +I G+C G + EA + M E
Sbjct: 380 GRVTEA---------RKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
P+A +Y ++I G +N +++ + EM ++ ++ T+ L +GL
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM-LEIGCFPNKTTFLILFEGLQ 481
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 28/295 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + +L TY I+ + +E +L M ++G PDA +Y ++ G+C
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A +M++ I P+ TY +I+ALC +++ EA ++F EML PD ++
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C + + +A + +M+ +PD AL + +IH LC GRV EA +
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPD------NALLS--TLIHWLCKEGRVTEARKLFD 390
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSD 268
E G P ++Y +I+G C+ EL +A L +M +RK + TY L++GLS
Sbjct: 391 EF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC--KPNAFTYNVLIEGLSK 447
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
N +G +VL +EM G P+ +L GL K + +D
Sbjct: 448 --------NGNVKEG--VRVL---EEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 196/460 (42%), Gaps = 51/460 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+N +I+ + ++ V + + M + G+SP L++ +++ G A++ EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 103 QK-GILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEF 158
+ G+ PD++T+++LI C + EA+ +F++M PD +T+ T++ C G+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A ++ M+ K T P + +Y ++ G C ++EA+ + M GL P
Sbjct: 261 KIAHNVLSGMLKKA------TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE-VTYAYLMQGLSDEDTYASLIN 277
+AV+Y +I G + Y+ E+ ++ G D T+A D T+ LI
Sbjct: 315 NAVTYNTLIKGLSEAHR----YD---EIKDILIGGNDAFTTFA------PDACTFNILIK 361
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL---LIIADY 334
A+C G L + + EM + PDS S+LI L R + +A L L +
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL--CMRNEFDRAETLFNELFEKEV 419
Query: 335 MYTS---MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+ P Y+ + E C+N + K + + RG+
Sbjct: 420 LLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-----------------Q 462
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
D Y LI HCR AY + + M+R FV + + L+ L G +
Sbjct: 463 DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 522
Query: 451 QNTLRSCNLN-DSELHKVLNEIDTRKFPPIGATLLDVLAE 489
Q LRS L + H VL E+ RKF L+ ++ E
Sbjct: 523 QRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLE 562
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 44/325 (13%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F R + + D T+N +I C V++ I + M +PD ++Y +I G C
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 87 NNRCPGKAYEFKLEMDQKG--ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPD 141
A+ M +K + P+ +Y++L++ C K+ + EA +F +MLS P+
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL---PDFVTGFSPALFTYNAIIHGLCFL 198
+T+ TL+ S+A H + ++ K +L D T F+P T+N +I C
Sbjct: 316 AVTYNTLIKG------LSEA-HRYDEI--KDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDE- 256
G ++ A+ + + M M L PD+ SY ++I C E +A L E+ +++V+ G DE
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 257 --VTYAY-----------------------LMQGLSDEDTYASLINAYCAQGELFKVLTL 291
+ AY + +G+ D +Y +LI +C +G+ L
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYEL 486
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDK 316
M + +PD LLI+GL K
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLK 511
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 195/458 (42%), Gaps = 55/458 (12%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
+ + + ++ +Y +++ +C+ Q +++ V + M +GL P+A++Y +I G
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL----- 326
Query: 91 PGKAYEFKLEMDQKGIL-----------PDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
+A+ + + K IL PDA T++ LI+A C L A +FQEML+
Sbjct: 327 -SEAHRYD---EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
PD +++ L+ C+ EF +A + +++ K VL P YN + LC
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG-KDECKPLAAAYNPMFEYLC 441
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G+ ++A + R + + G+ D SY +I+G C+ + + AYEL V M R+
Sbjct: 442 ANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRR------- 493
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+ + D +TY LI+ GE M LP + ++ L K
Sbjct: 494 -------EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAK 546
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG--------LVKSFS 368
+ ++ + L++ + ++ L+ + + E ++ LVK
Sbjct: 547 RKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE 606
Query: 369 MRGLVNEAARAHDT------MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+ G + E + D LE + D N +I C+ +A+++Y E+V G
Sbjct: 607 LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Query: 423 FVSHMFSVLALLTALRDHGMYNERSWVIQN--TLRSCN 458
+ + L AL G + E +V + TLR +
Sbjct: 667 NHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESD 704
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 154/367 (41%), Gaps = 43/367 (11%)
Query: 59 GVGILRGMAEKGLSPDALSYRYVIT--GFCNNRCPGKAYEFKLEMDQKGI--LPDAFTYS 114
G+ ++ KG S S+ ++ G N + + F +E G L D + ++
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRY-FN 142
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
SLI++ + E+ LFQ M P +TF +L+ G A + +M
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR- 201
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
G +P +T+N +I+G C V+EA I + M +PD V+Y +I G C
Sbjct: 202 ------TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
+ +++ A+ + M +K V +Y +L+ YC + E+ + + +
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVV------------SYTTLVRGYCMKQEIDEAVLV 303
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
+M +G P++V + LI GL + R + K +L+ D T P+ ++ LI
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK-DILIGGNDAFTTFAPDACTFNILI-- 360
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
K+ G ++ A + ML PD A Y++LI C R +A
Sbjct: 361 -------------KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 412 YNMYMEM 418
++ E+
Sbjct: 408 ETLFNEL 414
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ + I ++ TYN +I C R +LR M EK ++PD +++ +I F R
Sbjct: 37 HEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKV 96
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A E EM + I P TY+S+I C + R+ +A + M S PD +TF+TL
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ C + +M +G++ + V TY +IHG C +G ++ A +L
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTV--------TYTTLIHGFCQVGDLDAAQDLL 208
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
M G++PD +++ +++G C +ELRKA+ +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 25/255 (9%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + + D + ++ C + A EM +KGI P+ TY+ +I + C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
S+A L + M+ PD +TF+ L++A E + S+A ++ +M+ +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF-------- 112
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P TYN++I G C RV++A +L M G SPD V++ +I+G+C+ + + E+
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
EM R+ + +++ TY +LI+ +C G+L L +EM G P
Sbjct: 173 FCEMHRRGI--------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Query: 303 DSVIDSLLINGLDKK 317
D + ++ GL K
Sbjct: 219 DYITFHCMLAGLCSK 233
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 50/277 (18%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D + T ++ C +G A ++ +M KG+ P+ + TYN +I C GR
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPN--------VLTYNCMIDSFCHSGR 60
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
+A +LR M E ++PD V++ +I+ F + R++ +A E+ EM R W + T
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR---WSIFPTTI- 116
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
TY S+I+ +C Q + + D M+ KG PD V S LING K R
Sbjct: 117 ----------TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 166
Query: 321 KD-----TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
+ + H I+A N + Y TLI F G ++
Sbjct: 167 DNGMEIFCEMHRRGIVA--------NTVTYTTLIH---------------GFCQVGDLDA 203
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
A + M+ PD ++ ++ C + + KA+
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 2 KLLRDSFTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQ 54
++LR S T T+ M+ R R + S+ D+ T++ +I +C +
Sbjct: 105 EMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
RV+ G+ I M +G+ + ++Y +I GFC A + EM G+ PD T+
Sbjct: 165 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 224
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSPPD 141
++ LCSK+ L +A+ + +++ D
Sbjct: 225 CMLAGLCSKKELRKAFAILEDLQKSED 251
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +I+++C G L M K PD V S LIN K+ + +
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSE-------- 98
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A+ +Y M + I+ T I + ++ F + V++A R D+M P
Sbjct: 99 -AEEIYKEMLRWSIFPTTI---------TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
D ++ LI +C+ V ++ EM R G V++ + L+
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 199/469 (42%), Gaps = 50/469 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S+T L + G + + + D +N +I +E V L M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEF---KLEMDQKGILPDAFTYSSLIQALCSK 123
E GL+P +Y +I G+ P ++ E LE + P+ T++ L+QA C K
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+++ EA+ + ++M PD +T+ T+ +GE +A +++ K V+ +
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA---ESEVVEKMVMKEKA-- 256
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P T ++ G C GRV + L +R M EM + + V + +I+GF +
Sbjct: 257 -KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV------- 308
Query: 241 ELKVEMDRKVVWGLDEV-TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
MDR G+DEV T +D TY++++NA+ + G + K + EM G
Sbjct: 309 -----MDRD---GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFK 358
PD+ S+L G + K + L +I + S PN +I+ T+I CSN
Sbjct: 361 VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE----SRPNVVIFTTVISGWCSN---- 412
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
G +++A R + M + P+ + L++ + KA + M
Sbjct: 413 ------------GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKV 467
G + L L A R G+ +E + I N L+ ++ ++L K+
Sbjct: 461 RGCGVKPENSTFLLLAEAWRVAGLTDESNKAI-NALKCKDIEIAKLEKL 508
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 131/335 (39%), Gaps = 75/335 (22%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT--------------- 83
++ T+N +++ C ++VE+ +++ M E G+ PD ++Y + T
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 84 ----------------------GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
G+C F M + + + ++SLI
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 122 S---KRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD-- 176
+ + E L +E D IT++T+M+A G KA + +M+ GV PD
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 177 ------------------------FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
+ P + + +I G C G +++A+ + M
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY-----AYLMQGLS 267
+ G+SP+ ++ ++ G+ + ++ KA E+ ++M R + T+ A+ + GL+
Sbjct: 427 KFGVSPNIKTFETLMWGYLEVKQPWKAEEV-LQMMRGCGVKPENSTFLLLAEAWRVAGLT 485
Query: 268 DEDTYASLINAY-CAQGELFKVLTLDDEMSHKGSL 301
DE A INA C E+ K+ L + S S
Sbjct: 486 DESNKA--INALKCKDIEIAKLEKLYQKQSSGSSF 518
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 29/251 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVG-ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
IQ D +YN+++K+HC + +K +++ M +G D +SY +I FC KA
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKA 344
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
Y EM QKG++ + TY+SLI+A + S A L +M PD I +TT++
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G KA+ + + MI + PD ++ YN++I GLC GRV EA+ + M
Sbjct: 405 LCKSGNVDKAYGVFNDMIEHEITPDAIS--------YNSLISGLCRSGRVTEAIKLFEDM 456
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DED 270
PD +++ +I G + ++L AY+ VW D++ + +G + D D
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYK---------VW--DQM----MDKGFTLDRD 501
Query: 271 TYASLINAYCA 281
+LI A C+
Sbjct: 502 VSDTLIKASCS 512
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 120/234 (51%), Gaps = 14/234 (5%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ DL TYN ++ + +++ G++ M G+ DA SY ++ C P K Y
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 97 FKL-EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHAC 152
F + EM+ +G D +YS+LI+ C +AY LF+EM + +T+T+L+ A
Sbjct: 312 FMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
EG S A + QM G+ PD + Y I+ LC G V++A G+ M
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRI--------FYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
E ++PDA+SY +ISG C++ + +A +L +M K DE+T+ +++ GL
Sbjct: 423 EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP-DELTFKFIIGGL 475
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 25/285 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S ++ YN +I C R+EK + M++ G PD ++Y ++ + +N
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
+A EM + GI DA++Y+ L++ C + Y+ + + P D ++++TL+
Sbjct: 273 RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLI 332
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C KA+ + +M KG++ + VT Y ++I G A +L
Sbjct: 333 ETFCRASNTRKAYRLFEEMRQKGMVMNVVT--------YTSLIKAFLREGNSSVAKKLLD 384
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M E+GLSPD + Y ++ C++ + KAY + +M E+T D
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH------EIT--------PDA 430
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+Y SLI+ C G + + + L ++M K PD + +I GL
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 178/457 (38%), Gaps = 83/457 (18%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL--- 99
YN+ I R E I M G S +Y I+G C K +F L
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLC------KVKKFDLIDA 100
Query: 100 ---EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M+ G +PD + ++ + LC + ++ A F M+ PD +++T L++
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 154 LEGEFSKAFHMHHQMIHKGVLPD------FVTGFSPA----------------------L 185
G+ + A + + MI GV PD V G A
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
YNA+I G C GR+E+A + M ++G PD V+Y ++++ + N L++A + E
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 246 MDRKVVWGLDEVTYAYLMQ----------------------GLSDEDTYASLINAYCAQG 283
M R + LD +Y L++ G D +Y++LI +C
Sbjct: 281 MVRSGI-QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK------DTKAHLLLIIADYMYT 337
K L +EM KG + + V + LI ++ + D L L YT
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 338 SMPN-----------YIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
++ + Y +++ +IE+ + S L+ G V EA + + M
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
PD + +I R + AY ++ +M+ GF
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 155/388 (39%), Gaps = 52/388 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ +N + C +V V M ++G PD +SY +I G A E
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP----DDITFTTLMHACCL 154
M + G+ PD ++L+ LC R++ AY + E + + + L+ C
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G KA + M G PD V TYN +++ ++ A G++ M
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLV--------TYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKV-EMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ DA SY ++ C+ K Y V EM+ + G D +Y+
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR---------------GFCDVVSYS 329
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI +C K L +EM KG + + V + LI ++ + K L D
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL-----D 384
Query: 334 YMYTSM---PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
M T + P+ I Y T++++ L KS G V++A + M+E P
Sbjct: 385 QM-TELGLSPDRIFYTTILDH-----------LCKS----GNVDKAYGVFNDMIEHEITP 428
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
D YN LI CR V +A ++ +M
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 148/401 (36%), Gaps = 76/401 (18%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M G FTYS I LC ++ L +M + PD F + C E
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ A M+ +G PD V+ Y +I+GL G+V +A+ I M G+
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVS--------YTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
SPD + ++ G C R++ AYE+ E + L V Y +LI
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV-------------VYNALI 227
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN-----------------------G 313
+ +C G + K L MS G PD V ++L+N
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMP---------NYIIYDTLIEN-CSNNEFK----- 358
LD + + K H + D Y M + + Y TLIE C + +
Sbjct: 288 LDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRL 347
Query: 359 --------------SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+ L+K+F G + A + D M E PD Y ++ C+
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
NV KAY ++ +M+ + S +L++ L G E
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S++ ++TF R + + ++ TY +IK +L M
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
E GLSPD + Y ++ C + KAY +M + I PDA +Y+SLI LC R+
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
+EA LF++M PD++TF ++ + S A+ + QM+ KG D
Sbjct: 447 TEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++T+ +K F + V + + D Y I+ C V+K G+ M
Sbjct: 362 TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM 421
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
E ++PDA+SY +I+G C + +A + +M K PD T+ +I L ++L
Sbjct: 422 IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKL 481
Query: 127 SEAYHLFQEMLSP----PDDITFTTLMHACCLEGE 157
S AY ++ +M+ D++ T + +C + +
Sbjct: 482 SAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMSAD 516
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 46/418 (11%)
Query: 56 VEKG-----VGILRGMAEKGLS-P-DALSYRYVITGFCNNRCPGKAYEF-KLEMDQKGIL 107
VEKG + +L M K ++ P D VI+GFC P A F + +D ++
Sbjct: 145 VEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLV 204
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHM 164
P+ TY++L+ ALC ++ E L + + D + ++ +H G A
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+M+ KG+ D V +Y+ +I GL G VEEALG+L M + G+ P+ ++Y
Sbjct: 265 DREMVEKGMNRDVV--------SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGE 284
+I G C+ +L +A+ L +R + G++ DE Y +LI+ C +G
Sbjct: 317 AIIRGLCKMGKLEEAFVL---FNRILSVGIE-----------VDEFLYVTLIDGICRKGN 362
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY--TSMPNY 342
L + ++ +M +G P + + +INGL R + ++ D + T + +Y
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSY 422
Query: 343 I----------IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
I I +E + L+K+F + G EA + M E + PD
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
A Y +I +C+ + +A M+ E+ R VS ++ AL GM + + V+
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 39/290 (13%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
R M EKG++ D +SY +I G +A +M ++G+ P+ TY+++I+ LC
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+L EA+ LF +LS D+ + TL+ C +G ++AF M M +G+
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI------- 378
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL---- 236
P++ TYN +I+GLC GRV EA + + G+ D ++Y ++ + + + +
Sbjct: 379 -QPSILTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVL 432
Query: 237 ---RKAYELKVEMDRKV------------VWGLDEVTYAYL--MQGLSDEDTYASLINAY 279
R+ E K+ MD + +G + Y + M D TYA++I Y
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
C G++ + L + +E+ K S+ +V + +I+ L KK DT +L+
Sbjct: 493 CKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGML-DTATEVLI 540
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 30/288 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E ++ +L TY II+ C M ++E+ + + G+ D Y +I G C +
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNR 365
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACC 153
A+ +M+Q+GI P TY+++I LC R+SEA + + ++ D IT++TL+ +
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG--DVITYSTLLDSYI 423
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ + + + D V N ++ +G EA + R MPE
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLV--------MCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
M L+PD +Y +I G+C+ ++ +A E+ E+ + V S Y
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV---------------SAAVCYN 520
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPD-----SVIDSLLINGLDK 316
+I+A C +G L + E+ KG D +++ S+ NG DK
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 189/494 (38%), Gaps = 78/494 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + D+ TY+ ++ + +Q ++ + I R E + D + ++ F G
Sbjct: 405 SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML--SPPDDITFTTLMH 150
+A M + + PD TY+++I+ C ++ EA +F E+ S + + ++
Sbjct: 465 EADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIID 524
Query: 151 ACCLEGEFSKA---------------FHMHHQMIH--------KGVLPDFVTGFSP---- 183
A C +G A H ++H KG+L V G
Sbjct: 525 ALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL-GLVYGLEQLNSD 583
Query: 184 -ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
L N I LC G E A+ + M GL+ S I + N AY L
Sbjct: 584 VCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI--LKTLVDNLRSLDAYLL 641
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYC 280
V + +D + Y ++ GL E TY SLIN C
Sbjct: 642 VVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC 701
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
QG L + L L D + + G +P V +LI+ L K+ D + L +++ + +P
Sbjct: 702 QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL---VP 758
Query: 341 NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIF 400
N IIY+++++ + G +A R + G PD + +I
Sbjct: 759 NIIIYNSIVD---------------GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLN 460
+C++ ++ +A +++ E + F L L+ G E +++ L S
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS---- 859
Query: 461 DSELHKVLNEIDTR 474
+ K++N +D
Sbjct: 860 -ESVVKLINRVDAE 872
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 185/488 (37%), Gaps = 91/488 (18%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCRFTAARN---------SESIQQDLATYNKIIKQHCL 52
K++++ L T+ ++R +C+ S I+ D Y +I C
Sbjct: 302 KMIKEGVEPNLITYTAIIRG--LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICR 359
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
+ + +L M ++G+ P L+Y VI G C +A E KG++ D T
Sbjct: 360 KGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVIT 414
Query: 113 YSSLIQALCSKRRLSEAYHL---FQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
YS+L+ + + + + F E P D + L+ A L G + +A ++ M
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMP 474
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+ PD TY +I G C G++EEAL + + + +S AV Y +I
Sbjct: 475 EMDLTPDTA--------TYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDA 525
Query: 230 FCQNRELRKAYELKVEMDRK---------------------------VVWGLDEVTYAYL 262
C+ L A E+ +E+ K +V+GL+++
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC 585
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG---SLPDSVIDSLLINGLDKKAR 319
+ L+D I C +G + + M KG + P +++ +L+ N
Sbjct: 586 LGMLNDA------ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDN------- 632
Query: 320 TKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-------------CSNNEFKSVV----- 361
+ A+LL++ A S + I Y +I CS + + V
Sbjct: 633 LRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTIT 692
Query: 362 --GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
L+ +G + EA R D++ P Y +LI + C+ A + MV
Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMV 752
Query: 420 RYGFVSHM 427
G V ++
Sbjct: 753 SKGLVPNI 760
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + ++ YN I+ +C + + E + ++ ++PDA + +I G+C
Sbjct: 753 SKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A E K I D F + LI+ C+K R+ EA L +EML + + A
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAE 872
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFV 178
E E + F + ++ +G +P +
Sbjct: 873 LAESESIRGFLV--ELCEQGRVPQAI 896
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 34/312 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ D+ T + ++ CL ++ V + M + G+ D + +I C NR A
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E M +GI P+ TYSSLI LC RL++A EM S P+ ITF+ L+ A
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G+ SK ++ MI + P +FTY+++I+GLC RV+EA+ +L M
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSI--------DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG------- 265
G +P+ V+Y + +GF ++ + +L +M ++ V + V+ L++G
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA-NTVSCNTLIKGYFQAGKI 239
Query: 266 ---------------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+ + +Y ++ A GE+ K L+ + M + D + +++
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 311 INGLDKKARTKD 322
I+G+ K K+
Sbjct: 300 IHGMCKACMVKE 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 49/291 (16%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + G+ PD ++ ++ GFC + A +M++ GI D + LI LC R
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--- 179
+ A + + M P+ +T+++L+ C G + A H+M K + P+ +T
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 180 ------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
P +FTY+++I+GLC RV+EA+ +L M G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+P+ V+Y + +GF ++ + +L +M ++ V ++ + +L
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA--------------ANTVSCNTL 229
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLP-----DSVIDSLLINGLDKKARTK 321
I Y G++ L + M+ G +P + V+ L NG +KA ++
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR 280
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDDITFTTLMHACCLE 155
L+M + GI PD T SSL+ C + +A ++ ++M D + T L+ C
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
A + +M +G+ SP + TY+++I GLC GR+ +A L M
Sbjct: 62 RLVVPALEVLKRMKDRGI--------SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED--TYA 273
++P+ +++ +I + + +L K +D V Y ++Q D + TY+
Sbjct: 114 INPNVITFSALIDAYAKRGKLSK---------------VDSV-YKMMIQMSIDPNVFTYS 157
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
SLI C + + + + D M KG P+ V S L NG K +R D
Sbjct: 158 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ I ++ T++ +I + ++ K + + M + + P+ +Y +I G C +
Sbjct: 110 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 169
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A + M KG P+ TYS+L R+ + L +M + ++ TL
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ G+ A + M G++P+ + +YN ++ GL G VE+AL
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPN--------IRSYNIVLAGLFANGEVEKALSRF 281
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
M + D ++Y I+I G C+ +++AY+L
Sbjct: 282 EHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI ++ TY+ +I C+ RV++ + +L M KG +P+ ++Y + GF +
Sbjct: 148 SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG 207
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+ +M Q+G+ + + ++LI+ ++ A +F M S P+ ++ ++
Sbjct: 208 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
GE KA M T + TY +IHG+C V+EA + +
Sbjct: 268 LFANGEVEKALSRFEHMQK--------TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
Query: 212 PEMGLSPDAVSYIIVIS 228
+ PD +Y I+I+
Sbjct: 320 KFKRVEPDFKAYTIMIA 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 43/285 (15%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P + T +++++G C +++A+ + M +MG+ D V I+I C+NR + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 240 YE-LKVEMDRKVVWGLDEVTYAYLMQG------LSDED----------------TYASLI 276
E LK DR + + VTY+ L+ G L+D + T+++LI
Sbjct: 68 LEVLKRMKDRGISPNV--VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+AY +G+L KV ++ M P+ S LI GL R + L L+I+
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK--- 182
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
PN + Y TL +N FKS V++ + D M + + N
Sbjct: 183 GCTPNVVTYSTL----ANGFFKS-----------SRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
LI + + + A ++ M G + ++ S +L L +G
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANG 272
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 177/437 (40%), Gaps = 57/437 (13%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I+ TYN +I ++E+ M G + S+ +I G+C A
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCL 154
+ EM GI P TY+ I ALC R+ +A L M + PD +++ TLMH
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-AAPDVVSYNTLMHGYIK 386
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTG-FSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+F +A + D G P++ TYN +I GLC G +E A + M
Sbjct: 387 MGKFVEA---------SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-----LSD 268
+ PD ++Y ++ GF +N L A E+ EM RK G+ YAY + L D
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK---GIKPDGYAYTTRAVGELRLGD 494
Query: 269 EDT--------------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D Y I+ C G L K + ++ G +PD V +
Sbjct: 495 SDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFS 368
+I G + + K +A +Y M +Y ++I F + G K+
Sbjct: 555 TVIRGYLENGQFK---------MARNLYDEMLRKRLYPSVI-----TYFVLIYGHAKA-- 598
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMF 428
G + +A + M + +P+ +N L++ C+ N+ +AY +M G + +
Sbjct: 599 --GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 429 SVLALLTALRDHGMYNE 445
S L++ D + E
Sbjct: 657 SYTMLISKNCDFEKWEE 673
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
+PD Y I G C KA EF+ ++ + G++PD TY+++I+ + A +
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 132 LFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
L+ EML P IT+ L++ G +AF +M +GV P+ + T+
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN--------VMTH 623
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
NA+++G+C G ++EA L M E G+ P+ SY ++IS C + + +L EM
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 141/368 (38%), Gaps = 51/368 (13%)
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
EK + M KG P + V+ ++R KA M + GI+P T++++
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244
Query: 117 IQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
+ + L ++ EM ++T+ L++ G+ +A H M
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR--- 301
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+GF+ +++N +I G C G ++A G+ M G+ P +Y I I C
Sbjct: 302 -----SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
+ A EL M D V+Y LM G Y G+ + L D
Sbjct: 357 GRIDDARELLSSMA-----APDVVSYNTLMHG-------------YIKMGKFVEASLLFD 398
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM--PNYIIYDTLIEN 351
++ P V + LI+GL + + + + + M T + P+ I Y T
Sbjct: 399 DLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR-----LKEEMTTQLIFPDVITYTT---- 449
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
LVK F G ++ A +D ML KPDG Y R + KA
Sbjct: 450 -----------LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498
Query: 412 YNMYMEMV 419
+ ++ EMV
Sbjct: 499 FRLHEEMV 506
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 3 LLRDSFTATLKTFRHMVRNGVVCRFTAARN------SESIQQDLATYNKIIKQHCLMQRV 56
L+ D T T R + NG +F ARN + + + TY +I H R+
Sbjct: 546 LVPDHVTYT-TVIRGYLENG---QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
E+ M ++G+ P+ +++ ++ G C +AY + +M+++GI P+ ++Y+ L
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 117 IQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
I C + E L++EML PD T L
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 44/341 (12%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+L M GL PD ++ + C +A + E+ +K PD +TY+ L++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 122 SKRRLSEAYHLFQEMLS----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
+ L Y EM PD ++FT L+ C +A ++ ++ +
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN------- 258
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
GF P F YN I+ G C L + EA+G+ + M E G+ PD ++Y +I G L
Sbjct: 259 -AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG------LS 311
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
KA +VE R + + + Y D TY SL+N C +GE L+L +EM
Sbjct: 312 KAG--RVEEARMYLKTMVDAGYE------PDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
+G P+ + L++GL KAR D L Y+ + + E
Sbjct: 364 RGCAPNDCTYNTLLHGL-CKARLMDKGMEL-----------------YEMMKSSGVKLES 405
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
LV+S G V EA D ++ D + Y+ L
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 13/235 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D T + ++ C RV++ +++ + EK PD +Y +++ C + Y
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 96 EFKLEM-DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
EF EM D + PD +++ LI +C+ + L EA +L ++ + PD + T+M
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C + S+A ++ +M +GV PD +T YN +I GL GRVEEA L+ M
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQIT--------YNTLIFGLSKAGRVEEARMYLKTM 326
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ G PD +Y +++G C+ E A L EM+ + ++ TY L+ GL
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC-APNDCTYNTLLHGL 380
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
R+ ++ DL ++ +I C + + + + ++ + G PD Y ++ GFC
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTT 147
+A +M ++G+ PD TY++LI L R+ EA + M+ PD T+T+
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
LM+ C +GE A + +M +G P+ TYN ++HGLC +++ + +
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEARGCAPNDC--------TYNTLLHGLCKARLMDKGMEL 392
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
M G+ ++ Y ++ ++ ++ +AYE+ YA + LS
Sbjct: 393 YEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV--------------FDYAVDSKSLS 438
Query: 268 DEDTYASL 275
D Y++L
Sbjct: 439 DASAYSTL 446
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 58/323 (17%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM-HAC-CLEGEFSKAFHMH 165
++S++Q+ S +++ LFQ +L P TF L+ HAC + S +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+ M++ G+ PD VT + + LC GRV+EA +++ + E PD +Y
Sbjct: 148 NLMVNNGLEPDQVT--------TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGEL 285
++ C+ ++L YE EM D V++ L I+ C L
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL-------------IDNVCNSKNL 246
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------ 339
+ + L ++ + G PD + + ++ G ++ + A +Y M
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE---------AVGVYKKMKEEGVE 297
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
P+ I Y+TLI GL K+ G V EA TM++ Y+PD A Y L+
Sbjct: 298 PDQITYNTLI-----------FGLSKA----GRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 400 FDHCRRLNVHKAYNMYMEMVRYG 422
CR+ A ++ EM G
Sbjct: 343 NGMCRKGESLGALSLLEEMEARG 365
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 187/439 (42%), Gaps = 73/439 (16%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ ++N + M+ +++ V + G+ K SP+ ++Y I FC + A +
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
M + + P+ T++ LI C L A L++EM + +T+T L+ C
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+GE +A M+ +M+ V P+ + Y II G G + A+ L M
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLV--------YTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ D +Y ++ISG C N +L++A E+ +M++ + + D +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL--------------VPDMVIFT 342
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA- 332
+++NAY G + + + ++ +G PD V S +I+G+ K + + + + A
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN 402
Query: 333 DYMYTSM--------------------------PNYIIYDTLIEN-CSN----NEFK--- 358
D MYT + P+ +Y + I C + FK
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 359 ------------SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
+ L+ + +GL+ EA + D ML PD AV++LLI + +
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 407 NVHKAYNMYMEMVRYGFVS 425
N+ A ++ ++M R G V+
Sbjct: 523 NMAAASDLLLDMQRRGLVT 541
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 194/494 (39%), Gaps = 72/494 (14%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
+F A S +++N ++ C + +V+ I+ M G PD +SY +I G
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 86 CNNRCPGKAYEFKLEMD----QKGIL--PDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
C N G L ++ G + PD +++SL + L E + ML
Sbjct: 102 CRN---GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 139 -PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
P+ +T++T + C GE A H M + SP + T+ +I G C
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL--------SPNVVTFTCLIDGYCK 210
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
G +E A+ + + M + +S + V+Y +I GFC+ E+++A E+ M V + +
Sbjct: 211 AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP-NSL 269
Query: 258 TYAYLMQGL---SDED-------------------TYASLINAYCAQGELFKVLTLDDEM 295
Y ++ G D D Y +I+ C G+L + + ++M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLI 349
+PD VI + ++N K R K A MY + P+ + T+I
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMK---------AAVNMYHKLIERGFEPDVVALSTMI 380
Query: 350 ENCSNNE--FKSVV-------------GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ + N +++V L+ + G E R + E PD +
Sbjct: 381 DGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
Y I C++ N+ A+ + MV+ G + + + L+ L G+ E V L
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Query: 455 RSCNLNDSELHKVL 468
S DS + +L
Sbjct: 501 NSGISPDSAVFDLL 514
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
+F A ++ ++ D+ Y II C ++++ I+ M + L PD + + ++ +
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITF 145
+ A ++ ++G PD S++I + +L EA F + +D+ +
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKANDVMY 406
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
T L+ A C EG+F + + ++ G++PD F Y + I GLC G + +A
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPD--------KFMYTSWIAGLCKQGNLVDAF 458
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+ M + GL D ++Y +I G + +A ++ EM L G
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM---------------LNSG 503
Query: 266 LS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+S D + LI AY +G + L +M +G
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 202/494 (40%), Gaps = 75/494 (15%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S+T L + G + + + D +N +I +E V L M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEF---KLEMDQKGILPDAFTYSSLIQALCSK 123
E GL+P +Y +I G+ P ++ E LE + P+ T++ L+QA C K
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+++ EA+ + ++M PD +T+ T+ +GE +A +++ K V+ +
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA---ESEVVEKMVMKEKA-- 256
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P T ++ G C GRV + L +R M EM + + V + +I+GF +
Sbjct: 257 -KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV------- 308
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDED--------------------------TYAS 274
MDR G+DEVT L+ ++E TY++
Sbjct: 309 -----MDRD---GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYST 360
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
++NA+ + G + K + EM G PD+ S+L G + K + L +I +
Sbjct: 361 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE- 419
Query: 335 MYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
S PN +I+ T+I CSN G +++A R + M + P+
Sbjct: 420 ---SRPNVVIFTTVISGWCSN----------------GSMDDAMRVFNKMCKFGVSPNIK 460
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNT 453
+ L++ + KA + M G + L L A R G+ +E + I N
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI-NA 519
Query: 454 LRSCNLNDSELHKV 467
L+ ++ ++L K+
Sbjct: 520 LKCKDIEIAKLEKL 533
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 52/293 (17%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
++ +C RV G+ +R M E + + + + +I GF MD+ G
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDG 313
Query: 106 ILPDAFT-----YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSK 160
I T ++ ++ + +++ + L +E D IT++T+M+A G K
Sbjct: 314 IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 373
Query: 161 AFHMHHQMIHKGVLPD--------------------------FVTGFSPALFTYNAIIHG 194
A + +M+ GV PD + P + + +I G
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISG 433
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL 254
C G +++A+ + M + G+SP+ ++ ++ G+ + ++ KA E+ ++M R
Sbjct: 434 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV-LQMMRGCGVKP 492
Query: 255 DEVTY-----AYLMQGLSDEDTYASLINAY-CAQGELFKVLTLDDEMSHKGSL 301
+ T+ A+ + GL+DE A INA C E+ K+ L + S S
Sbjct: 493 ENSTFLLLAEAWRVAGLTDESNKA--INALKCKDIEIAKLEKLYQKQSSGSSF 543
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 52/322 (16%)
Query: 3 LLRDSFTATL-KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVG 61
L++ T T+ K F+ MV+ GVV ++ YN ++ EK
Sbjct: 178 LVKQRLTDTVWKIFKKMVKLGVVA-------------NIHVYNVLVHACSKSGDPEKAEK 224
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+L M EKG+ PD +Y +I+ +C +A + M++ G+ P+ TY+S I
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 122 SKRRLSEAYHLFQEMLS--PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
+ R+ EA LF+E+ + +T+TTL+ C + +A + M +
Sbjct: 285 REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESR-------- 336
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GFSP + TYN+I+ LC GR+ EA +L M + PD ++ +I+ +C+ ++ A
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDD----- 293
++K +M + GL D +Y +LI+ +C KVL L++
Sbjct: 397 VKVKKKM---------------IESGLKLDMYSYKALIHGFC------KVLELENAKEEL 435
Query: 294 -EMSHKGSLPDSVIDSLLINGL 314
M KG P S L++G
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGF 457
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 33/318 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ TYN I R+ + + R + + ++ + ++Y +I G+C +A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ M+ +G P TY+S+++ LC R+ EA L EM PD+IT TL++A
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY 387
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + A + +MI G+ D +++Y A+IHG C + +E A L M
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLD--------MYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
E G SP +Y ++ GF + + +L E +++ GL +D Y
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR---GL-----------CADVALY 485
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
LI C ++ L + M KG + DSVI + + + + + A +
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASA-----LF 540
Query: 333 DYMYTS--MPNYIIYDTL 348
D MY M N +Y ++
Sbjct: 541 DVMYNRRLMVNLKLYKSI 558
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P L +++ L + I + M ++G+ + Y +++ ++ + KA
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+L EM+ K V D TY +LI+ YC + F+ L++ D M G
Sbjct: 223 EKLLSEMEEKGV--------------FPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFK 358
P+ V + I+G ++ R ++ L I D + N++ Y TLI+ C N+
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREA-TRLFREIKDDV---TANHVTYTTLIDGYCRMNDID 324
Query: 359 SVVGLVKSFSMRGL-------------------VNEAARAHDTMLEGNYKPDGAVYNLLI 399
+ L + RG + EA R M +PD N LI
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+C+ ++ A + +M+ G M+S AL+
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R + + I+ D T N +I +C ++ + V + + M E GL D SY+ +I GF
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C A E M +KG P TYS L+ ++ + E L +E D
Sbjct: 423 CKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADV 482
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+ L+ C + A + M KG++ D V F+ + Y
Sbjct: 483 ALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVI-FTTMAYAY 527
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 159/374 (42%), Gaps = 49/374 (13%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
SFT + F R + + + T+ ++ C + R + + ++ +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G P+ + Y +I C A + M + GI PD TY+SLI L
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+ + +M+ PD ITF+ L+ EG+ +A +++MI + V P+ V
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV----- 290
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
TYN++I+GLC G ++EA +L + G P+AV+Y +I+G+C+ + + ++
Sbjct: 291 ---TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 244 VEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCA 281
M R V G D TY L QG D T+ L++ C
Sbjct: 348 CVMSRDGVDG-DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-- 339
G++ K L +++ ++ + +++I GL K + +D A Y++ S+
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED---------AWYLFCSLAL 457
Query: 340 ----PNYIIYDTLI 349
P+ I Y T++
Sbjct: 458 KGVSPDVITYITMM 471
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
S+ ++ TYN +I C+ +++ +L + KG P+A++Y +I G+C +
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
+ M + G+ D FTY++L Q C + S A + M+S PD TF L+
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 151 ACCLEGEFSKAF-HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C G+ KA + K V+ + TYN II GLC +VE+A +
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVV---------GIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+ G+SPD ++YI ++ G + R R+A+EL +M ++
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 148/346 (42%), Gaps = 47/346 (13%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
++ GI D +++++LI C RLS A +M+ P +TF +L++ C
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
F +A + Q++ G+ P + YN II LC G+V AL +L+ M +MG+
Sbjct: 165 FYEAMSLVDQIVG--------LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIR 216
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ-GLS-DEDTYASL 275
PD V+Y +I+ + WG+ + +M+ G+S D T+++L
Sbjct: 217 PDVVTYNSLIT----------------RLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ Y +G+L + +EM + P+ V + LINGL + K L ++++
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+ PN + Y+TLI + V++ + M D Y
Sbjct: 321 F---PNAVTYNTLIN---------------GYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
N L +C+ A + MV G M++ LL L DHG
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 173/418 (41%), Gaps = 52/418 (12%)
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL--EMDQKGILPDA 110
+ + E + + R + G+S D S+ +I FC RC + +M + G P
Sbjct: 92 LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC--RCARLSLALSCLGKMMKLGFEPSI 149
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQ 167
T+ SL+ C R EA L +++ P+ + + T++ + C +G+ + A +
Sbjct: 150 VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
M G+ PD V TYN++I L G + IL M MG+SPD +++ +I
Sbjct: 210 MKKMGIRPDVV--------TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
+ + +L +A + EM ++ V + TY SLIN C G L +
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVN--------------PNIVTYNSLINGLCIHGLLDE 307
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
+ + + KG P++V + LING K R D L ++ D + + Y+T
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD---GDTFTYNT 364
Query: 348 LIEN-CSNNEFKS---VVG----------------LVKSFSMRGLVNEAARAHDTMLEGN 387
L + C +F + V+G L+ G + +A + + +
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN++I C+ V A+ ++ + G + + + ++ LR ++ E
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWRE 482
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 138/333 (41%), Gaps = 43/333 (12%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ--EMLSPPDDI-TFTTLMHACCLEG 156
+M + LP +S L+ A+ + LF+ EML D+ +FTTL+ C
Sbjct: 69 DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
S A +M+ GF P++ T+ ++++G C + R EA+ ++ + +G
Sbjct: 129 RLSLALSCLGKMMK--------LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
P+ V Y +I C+ ++ A ++ M +K+ D VTY L+ L T+
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHM-KKMGIRPDVVTYNSLITRLFHSGTW---- 235
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
G ++L+ +M G PD + S LI+ K+ + + K
Sbjct: 236 ------GVSARILS---DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQ---------- 276
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
Y+ +I+ N + L+ + GL++EA + + ++ + P+ YN
Sbjct: 277 --------YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
LI +C+ V + M R G F+
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 181/456 (39%), Gaps = 100/456 (21%)
Query: 40 LATYNKIIKQHC---------LMQ------RVEKGVGILRGMAEKGLSPDALSYRYVITG 84
A YN+++K +C LM R + M +G+SP+ ++Y +I+G
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 85 FCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT 144
C A + EM G PD+ +++L+ C R+ EA+ L + L D
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR--LFEKDGFV 300
Query: 145 FTTLMHACCLEGEF-----SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
++ ++G F ++AF ++ M+ K + PD + Y +I GL G
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII--------LYTILIQGLSKAG 352
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
++E+AL +L MP G+SPD Y VI C L + L++EM
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET---------- 402
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+ D T+ LI + C G + + + E+ G P + LI+GL K
Sbjct: 403 ----ESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 320 TKDTK-----------AHLLLIIA-------DYMYT------------------SMPNYI 343
K+ + A L L ++ D M S P+ +
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 344 IYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG---------------- 386
Y+ LI C + + L+ ++GL ++ ++T++ G
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV-TYNTLINGLHRVGREEEAFKLFYA 577
Query: 387 --NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
+++ AVY L+ CR+ V A+N++M+ ++
Sbjct: 578 KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 162/388 (41%), Gaps = 46/388 (11%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
L + G+S D+ + +I+ + KA E M + PD FTY+ +++ +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 123 KRRLSE-AYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
+ A+ ++ EML P+ TF LM +G S A M M +G+ P+ V
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
TY +I GLC G ++A + M G PD+V++ ++ GFC+ + +
Sbjct: 235 --------TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVE 286
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A+EL + + K + L Y+ L+ GL Y Y M K
Sbjct: 287 AFEL-LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA-------------NMLKK 332
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY-IIYDTLIENCSNNEF 357
PD ++ ++LI GL K + +D A + +SMP+ I DT C N
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIED---------ALKLLSSMPSKGISPDTY---CYNAVI 380
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
K++ G RGL+ E M E PD + +LI CR V +A ++ E
Sbjct: 381 KALCG-------RGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ + G + + AL+ L G E
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKE 461
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 34/243 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I+ D+ Y +I+ ++E + +L M KG+SPD Y VI C +
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
+LEM + PDA T++ LI ++C + EA +F E+ P TF L+
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 151 ACCLEGEFSKAFHMHHQM------------IHKGV------------------LPDFV-T 179
C GE +A + H+M H G L F T
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT 511
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G SP + +YN +I+G C G ++ AL +L + GLSPD+V+Y +I+G + +A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 240 YEL 242
++L
Sbjct: 572 FKL 574
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 13 KTFRHMVRNGVVC---RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK 69
++F MV +G + R A D+ +YN +I C ++ + +L + K
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
GLSPD+++Y +I G +R + FKL + Y SL+ C KR++ A
Sbjct: 547 GLSPDSVTYNTLINGL--HRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVA 604
Query: 130 YHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
++L+ + L S DD T + C EGE +A ++I D +T L
Sbjct: 605 FNLWMKYLKKISCLDDETANEI-EQCFKEGETERALR---RLIELDTRKDELT-----LG 655
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
Y + GLC GR EAL + + E + S + +I G C+ +L A E+
Sbjct: 656 PYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEV 711
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 161/384 (41%), Gaps = 66/384 (17%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVC--------RFTAARNSESIQQDLATYNKIIKQHCLM 53
K+ + TL T+ ++ NG+V R S I+ D+ TYN +IK +C
Sbjct: 212 KMKENGIEPTLYTYNFLM-NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
+ +K + LR M +G D ++Y +I + G EMD+KGI +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 114 SSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
S +I LC + +L+E Y +F+ M+ S P+ +T L+ G A + H+MI
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 171 KGVLPDFVT---------------------------GFSPALFTYNAIIHGLCFLGRVEE 203
+G PD VT G + Y+++I GL GRV+E
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY-- 261
A + M E G + D+ Y +I F ++R++ +A L M+ + G D+ Y Y
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE--GCDQTVYTYTI 508
Query: 262 LMQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKG 299
L+ G+ E + +L C G++ + + DE++ G
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Query: 300 SLPDSVIDSLLINGLDKKARTKDT 323
+ D+ + +IN L K R K+
Sbjct: 569 VILDAACED-MINTLCKAGRIKEA 591
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 162/416 (38%), Gaps = 63/416 (15%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
++ N +IK + VE+ + + R M E G+ P +Y +++ G + A
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
M+ I PD TY+++I+ C + +A ++M + D IT+ T++ AC +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 157 EFSKAFHMHHQMIHKGV-LPDFV--------------------------TGFSPALFTYN 189
+F ++ +M KG+ +P G P + Y
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I G G VE+A+ +L M + G PD V+Y +V++G C+N + +A +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY------- 419
Query: 250 VVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ GL+ + Y+SLI+ G + + L +EMS KG DS +
Sbjct: 420 --------FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFS 368
LI+ K + + A ++ M E C + + L F
Sbjct: 472 ALIDAFTKHRKVDEAIA---------LFKRMEEE-------EGCDQTVYTYTILLSGMFK 515
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
EA + D M++ P A + L C V +A + E+ G +
Sbjct: 516 -EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 146/344 (42%), Gaps = 40/344 (11%)
Query: 14 TFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP 73
F +M+R G + ++A Y +I + VE + +L M ++G P
Sbjct: 349 VFENMIRKGS-------------KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D ++Y V+ G C N +A ++ G+ ++ YSSLI L R+ EA LF
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 134 QEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNA 190
+EM D + L+ A + +A + +M + G ++TY
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE-------EGCDQTVYTYTI 508
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
++ G+ R EEAL + M + G++P A + + +G C + ++ +A ++
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI-------- 560
Query: 251 VWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
LDE+ ++ + ED +IN C G + + L D ++ +G I +++
Sbjct: 561 ---LDELAPMGVILDAACED----MINTLCKAGRIKEACKLADGITERGREVPGRIRTVM 613
Query: 311 INGLDK--KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC 352
IN L K KA H + I S+ + + TL+E C
Sbjct: 614 INALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETC 657
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P L+TYN +++GL V+ A + M + PD V+Y +I G+C+ + +KA
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
E +M+ + G + +D+ TY ++I A A + + L EM KG
Sbjct: 277 MEKLRDMETR---GHE-----------ADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
SL+I GL K+ + + Y +++ +I S
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNE------------------GYTVFENMIRKGSKPNVAI 364
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
L+ ++ G V +A R M++ +KPD Y++++ C+ V +A + Y
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD-YFHTC 423
Query: 420 RY-GFVSHMFSVLALLTALRDHGMYNE 445
R+ G + +L+ L G +E
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDE 450
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 181/473 (38%), Gaps = 87/473 (18%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I D YN + +VE+ + + R M KG++PD ++Y +I G C A
Sbjct: 391 NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA 450
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
++ +EMD G PD Y+ L L + EA+ + M + P +T ++
Sbjct: 451 FDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEG 510
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPD--FVTGFSPA------------------------L 185
GE KA + + HK D V GF A L
Sbjct: 511 LIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTL 570
Query: 186 FT------------------------------YNAIIHGLCFLGRVEEALGILRGMPEMG 215
FT Y +I C + V +A +
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG---------- 265
+ PD +Y I+I+ +C+ E ++AY L +M R+ V D VTY+ L+
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV-KPDVVTYSVLLNSDPELDMKREM 689
Query: 266 -----LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+ D Y +IN YC +L KV L +M + +PD V ++L+ ++ +
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS 749
Query: 321 KDTKAHLLLIIADYMYTSMPNYI-----------IYDTLIENCSNNEFKSVVGLVKSFSM 369
++ KA + Y YT + ++ I+D +IE+ + + L+
Sbjct: 750 REMKAFDVKPDVFY-YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
G + EA D M+E KPD Y LI CR V KA + EM+ G
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 168/431 (38%), Gaps = 44/431 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+ Y+ II+ H + K V + M +K + + ++ +C +AY
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ E + I D Y+ AL ++ EA LF+EM PD I +TTL+ C
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL+G+ S AF + +M G PD V YN + GL G +EA L+ M
Sbjct: 442 CLQGKCSDAFDLMIEMDGTGKTPDIV--------IYNVLAGGLATNGLAQEAFETLKMME 493
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD---- 268
G+ P V++ +VI G EL KA ++ K + + G D
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFE 553
Query: 269 ----------EDTYASLINAYCAQGE-LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
+ Y +L + CA+ + + K L D M G P+ + LI +
Sbjct: 554 RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEA 376
+ + +++ + +P+ Y +I C NE K L + R V
Sbjct: 614 NNVRKAREFFEILVTKKI---VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD-VKPD 669
Query: 377 ARAHDTMLEGNYK-------------PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+ +L + + PD Y ++I +C ++ K Y ++ +M R
Sbjct: 670 VVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREI 729
Query: 424 VSHMFSVLALL 434
V + + LL
Sbjct: 730 VPDVVTYTVLL 740
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 170/420 (40%), Gaps = 70/420 (16%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD----ALSYRYVITGFCNNRCPGKAYEFK 98
Y I+ CL Q + +L+ + + + D ++YR V+ G C A
Sbjct: 255 YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLMHACCLE 155
L+M++ GI PD + YS++I+ + +A +F +ML I ++++ C
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G FS+A+ + + + D V YN L LG+VEEA+ + R M G
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRV--------CYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++PD ++Y +I G C + A++L +EMD D V Y L GL+
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD-GTGKTPDIVIYNVLAGGLATNGL---- 481
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING----------------LDKKAR 319
AQ E F+ L + M ++G P V +++I G L+ K+R
Sbjct: 482 -----AQ-EAFETLKM---MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 320 TKD---TKAHLLLIIADYMYT-------SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
D K D+ + +P + + C+ ++
Sbjct: 533 ENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY------------ 580
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
+++A D M + +P+ ++Y LI CR NV KA + +V V +F+
Sbjct: 581 ---ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 55/268 (20%)
Query: 22 GVVCRFTAARN---------SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
G CR R ++ I DL TY +I +C + ++ + M + +
Sbjct: 608 GAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVK 667
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PD ++Y ++ N P + K EM+ ++PD Y+ +I C L + Y L
Sbjct: 668 PDVVTYSVLL-----NSDP--ELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYAL 720
Query: 133 FQEM----LSP---------------------------PDDITFTTLMHACCLEGEFSKA 161
F++M + P PD +T L+ C G+ +A
Sbjct: 721 FKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEA 780
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
+ QMI GV PD Y A+I C +G ++EA I M E G+ PD V
Sbjct: 781 KRIFDQMIESGVDPDAA--------PYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRK 249
Y +I+G C+N + KA +L EM K
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 132/321 (41%), Gaps = 56/321 (17%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
KA + M + G+ P+ Y LI A C + +A F+ +++ PD T+T ++
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C E +A+ + M + V PD VT Y+ +++ + L + R
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRDVKPDVVT--------YSVLLNS-------DPELDMKR 687
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M + PD V Y I+I+ +C +L+K Y L +M R+ + D VTY L++ +
Sbjct: 688 EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVP-DVVTYTVLLKNKPER 746
Query: 270 DT---------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ Y LI+ C G+L + + D+M G PD+ + LI
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 315 DKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
K K+ K +I D M S P+ + Y LI C N G
Sbjct: 807 CKMGYLKEAK-----MIFDRMIESGVKPDVVPYTALIAGCCRN---------------GF 846
Query: 373 VNEAARAHDTMLEGNYKPDGA 393
V +A + MLE KP A
Sbjct: 847 VLKAVKLVKEMLEKGIKPTKA 867
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ Y +I ++C + ++K + + M + + PD ++Y T N+ P +
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY----TVLLKNK-PER--NLS 749
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM + PD F Y+ LI C L EA +F +M+ PD +T L+ CC
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A + +MI GV PD V Y A+I G C G V +A+ +++ M E G
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVP--------YTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 216 LSPDAVS 222
+ P S
Sbjct: 862 IKPTKAS 868
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
I D+ TY ++K + E+ + R M + PD Y +I C G+A
Sbjct: 728 EIVPDVVTYTVLLKN-----KPERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEA 780
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+M + G+ PDA Y++LI C L EA +F M+ PD + +T L+
Sbjct: 781 KRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAG 840
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLP 175
CC G KA + +M+ KG+ P
Sbjct: 841 CCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 151/381 (39%), Gaps = 51/381 (13%)
Query: 46 IIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQK 104
++K + + ++ + I R G +PD + ++I+ + F E+++
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD---ITFTTLMHACCLEGEFSKA 161
G+ DA TY ++QAL E L +L + + + CL A
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
+ + + +L D S Y ++ GLC+ R+E+A ++ M + G+ PD
Sbjct: 272 YFLLQPLRDANILVD----KSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVY 327
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRK------VVWGLDEVTYAYLMQGLSDE------ 269
Y +I G +N + KA ++ +M +K V+ + + Y G E
Sbjct: 328 VYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVI--VSSILQCYCQMGNFSEAYDLFK 385
Query: 270 ---DTYASLIN-----AYCAQGELFKV---LTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+T SL A+ A G+L KV + L EM+ KG PD + + LI G +
Sbjct: 386 EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQG 445
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
+ D A L+I D + P+ +IY+ L + N GL EA
Sbjct: 446 KCSD--AFDLMIEMDGTGKT-PDIVIYNVLAGGLATN---------------GLAQEAFE 487
Query: 379 AHDTMLEGNYKPDGAVYNLLI 399
M KP +N++I
Sbjct: 488 TLKMMENRGVKPTYVTHNMVI 508
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 168/400 (42%), Gaps = 50/400 (12%)
Query: 24 VCRFTAARNSES---------IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
+C+F +E+ + D+ TYN +IK + +++ + R M E G+ PD
Sbjct: 23 LCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPD 82
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+Y +I+G N + + EM G+ PD ++Y++L+ R EA+ +
Sbjct: 83 VTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILH 142
Query: 135 E-----MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
E L P D T+ L+ A C G A + + + P L TYN
Sbjct: 143 EDIHLAGLVPGID-TYNILLDALCKSGHTDNAIELFKHLKSR---------VKPELMTYN 192
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I+GLC RV ++R + + G +P+AV+Y ++ + + + + K +L ++M ++
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 250 -----------VVWGLD---------EVTYAYLMQGLSDED--TYASLINAYCAQGELFK 287
VV L E + + G +D +Y +L+N Y G L
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
V L +E+ KG PD ++++NGL T + HL I M P+ + +
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGM---QPSVVTCNC 369
Query: 348 LIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
LI+ C + L S +R + H+ +G
Sbjct: 370 LIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDG 409
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 30/254 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ +L TYN +I C +RV ++R + + G +P+A++Y ++ + + K
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGL 243
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHA 151
+ L+M ++G D F +++ AL R EAY E++ D +++ TL++
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNL 303
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+G + ++ KG+ PD +T+ I++GL +G A L +
Sbjct: 304 YFKDGNLDAVDDLLEEIEMKGLKPDD--------YTHTIIVNGLLNIGNTGGAEKHLACI 355
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
EMG+ P V+ +I G C+ + +A L M+ + DE T
Sbjct: 356 GEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME------------------VRDEFT 397
Query: 272 YASLINAYCAQGEL 285
Y S+++ C G L
Sbjct: 398 YTSVVHNLCKDGRL 411
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + QD+ +YN ++ + ++ +L + KGL PD ++ ++ G N G
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
A + + + G+ P T + LI LC + A LF M D+ T+T+++H
Sbjct: 347 GAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM-EVRDEFTYTSVVHNL 405
Query: 153 CLEGEFSKAFHMHHQMIHKGV 173
C +G A + +KG+
Sbjct: 406 CKDGRLVCASKLLLSCYNKGM 426
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 40/262 (15%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGI-LPDAFTYSSLIQALCSKRRLSE 128
GL P+ + ++ C N A+ EM + GI P++ TYS+L+ L + R E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 129 AYHLFQEMLS----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV--TGFS 182
A LF++M+S PD +TF +++ C GE +A K +L DF+ G +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA---------KKIL-DFMKKNGCN 300
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P ++ Y+A+++G C +G+++EA + + GL D V Y +++ FC+N E +A +L
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDE----------------------DTYASLINAYC 280
EM D +TY +++GLS E +Y ++NA C
Sbjct: 361 LGEMKASRCRA-DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 281 AQGELFKVLTLDDEMSHKGSLP 302
GEL K + MS +G P
Sbjct: 420 CNGELEKAVKFLSVMSERGIWP 441
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 29/273 (10%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTLMHACCLEGEFSK 160
G+ P+ ++ L++ C ++ A+ + +EM +S P+ IT++TLM +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
A + MI K G SP T+N +I+G C G VE A IL M + G +P+
Sbjct: 251 AVELFEDMISK-------EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYC 280
+Y +++GFC+ ++++A + E+ +K LD V Y LM N +C
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEV-KKTGLKLDTVGYTTLM-------------NCFC 349
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
GE + + L EM D++ ++++ GL + R+++ L ++ ++ +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 341 NY-IIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
+Y II + L C N E + V + S RG+
Sbjct: 410 SYRIILNAL---CCNGELEKAVKFLSVMSERGI 439
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 36/261 (13%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F H V F + E I D T+N +I C VE+ IL M + G +P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQ---KGILPDAFTYSSLIQALCSKRRLSEAYH 131
+Y ++ GFC GK E K D+ G+ D Y++L+ C EA
Sbjct: 303 VYNYSALMNGFCK---VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 132 LFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV--------------- 173
L EM + D +T+ ++ EG +A M Q +GV
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 174 -------LPDFVT-----GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
F++ G P T+N ++ LC G E + +L G +GL P
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPK 479
Query: 222 SYIIVISGFCQNRELRKAYEL 242
S+ V+ C+ R+L +EL
Sbjct: 480 SWGAVVESICKERKLVHVFEL 500
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 34/255 (13%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACC 153
F QKG + TYS L+ L ++ + +M + F LM
Sbjct: 76 FNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR--- 132
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL-RGMP 212
FS++ +H +++ L + P+L + ++ L G V + +L
Sbjct: 133 ---HFSRS-DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH 188
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM--------- 263
+GL P+ + I++ C+N ++ A+ + EM R + + +TY+ LM
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 264 -------------QGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
+G+S D T+ +IN +C GE+ + + D M G P+ S
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 310 LINGLDKKARTKDTK 324
L+NG K + ++ K
Sbjct: 309 LMNGFCKVGKIQEAK 323
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 55/417 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ ++A +++ C R++K + ++ M G+ PDA +Y Y++ C G A +
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M+ G + TY++L++ LC L+++ + ++ P+ T++ L+ A
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
E +A + ++I V G P L +YN ++ G C GR ++A+ + R +P
Sbjct: 223 KERGTDEAVKLLDEII--------VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G + VSY I++ C + +A L EMD G D TY
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD-----GGDRAPSVV---------TYN 320
Query: 274 SLINAYCAQGELFKVLTLDDEMS---HKGSLPDSVIDSLLINGLDKKAR-TKDTKAHLLL 329
LIN+ G + L + EMS H+ + + + ++ AR K+ K L++
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVI-------ARLCKEGKVDLVV 373
Query: 330 IIADYMY--TSMPNYIIYDTLIENCS-NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
D M PN Y+ + C N++ + +++S S + + HD
Sbjct: 374 KCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK----QKCCTHD----- 424
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMY 443
Y +I CR+ N A+ + EM R GF + AL+ L GM+
Sbjct: 425 -------FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 75/346 (21%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I D + Y ++ Q C V + ++ M + G + ++Y ++ G C
Sbjct: 134 SSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLN 193
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
++ +F + QKG+ P+AFTYS L++A +R EA L E++ P+ +++ L+
Sbjct: 194 QSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLL 253
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFS 182
C EG A + ++ KG + V+ +
Sbjct: 254 TGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA 313
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMG--LSPDAVSYIIVISGFCQNRELRKAY 240
P++ TYN +I+ L F GR E+AL +L+ M + A SY VI+ C+
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK-------- 365
Query: 241 ELKVEMDRKVVWGLDEVTYA--------------------------YLMQGLSDE----- 269
E KV++ VV LDE+ Y Y++Q LS++
Sbjct: 366 EGKVDL---VVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCT 422
Query: 270 -DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
D Y S+I + C +G F L EM+ G PD+ S LI GL
Sbjct: 423 HDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 14/221 (6%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC--NNRCPGKAYEFKL 99
+YN +I + C +V+ V L M + P+ +Y I C N++ Y +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AIGSLCEHNSKVQEAFYIIQS 413
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+++ F Y S+I +LC K A+ L EM PD T++ L+ CLEG
Sbjct: 414 LSNKQKCCTHDF-YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
F+ A + M + P + +NA+I GLC + R + A+ + M E
Sbjct: 473 MFTGAMEVLSIM-------EESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKR 525
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
P+ +Y I++ G EL A E+ E+ + V G + V
Sbjct: 526 MPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 36/282 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKG--LSPDALSYRYVITGFCNNRCPGKAYEF 97
+ TYN +I R E+ + +L+ M++ A SY VI C +
Sbjct: 316 VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKC 375
Query: 98 KLEMDQKGILPDAFTYSSLIQALCS-KRRLSEAYHLFQEMLSPPDDIT---FTTLMHACC 153
EM + P+ TY++ I +LC ++ EA+++ Q + + T + +++ + C
Sbjct: 376 LDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC 434
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G AF + ++M GF P TY+A+I GLC G A+ +L M E
Sbjct: 435 RKGNTFAAFQLLYEMTR--------CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE 486
Query: 214 M-GLSPDAVSYIIVISGFCQNRELRKA---YELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
P ++ +I G C+ R A +E+ VE R + +E
Sbjct: 487 SENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKR-----------------MPNE 529
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
TYA L+ + EL + DE+ + + + +D +++
Sbjct: 530 TTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVM 571
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 45/282 (15%)
Query: 174 LPDFVTG-FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
L VTG P + +++ LC R+++A+ ++ M G+ PDA +Y +++ C+
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------------------SDED 270
+ A +L +M+ + + VTY L++GL +
Sbjct: 154 RGNVGYAMQLVEKMEDH-GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAF 212
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY+ L+ A + + + L DE+ KG P+ V ++L+ G K+ RT D A +
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A ++ +Y I L++ G EA M G+ P
Sbjct: 273 PAKGFKANVVSYNI------------------LLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLA 432
YN+LI +A + EM + +H F V A
Sbjct: 315 SVVTYNILINSLAFHGRTEQALQVLKEMSKG---NHQFRVTA 353
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEF 158
+K ++P+ Y+ I LC +L +A LF ++LS PD+ T+T L+H C + G+
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+KAF + +M KG++P+ VT YNA+I GLC LG V+ A +L +P+ G++P
Sbjct: 772 NKAFTLRDEMALKGIIPNIVT--------YNALIKGLCKLGNVDRAQRLLHKLPQKGITP 823
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDE 256
+A++Y +I G ++ + +A LK +M ++ +V G D+
Sbjct: 824 NAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDK 862
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 192/447 (42%), Gaps = 48/447 (10%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSES---IQQDLATYNKIIKQHCLMQRVEKGVGI 62
D FT ++ + V A+ +ES ++ ++ TYN +I + ++ VE +
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
LR M+E+G+S + ++Y +I G+C +A + +K ++ D Y L+ C
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
++ +A + M+ + +L++ C G+ +A + +M + PD
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH-- 401
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TYN ++ G C G V+EAL + M + + P ++Y I++ G+ +
Sbjct: 402 ------HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
L W + L +G+ +DE + ++L+ A G+ + + L + + +
Sbjct: 456 LSL---------WKM------MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
G L D++ +++I+GL K + + K L + ++ P Y L S+ +K
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNV---NIFRCKPAVQTYQAL----SHGYYK 553
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
G + EA + M P +YN LI + +++K ++ +E+
Sbjct: 554 V-----------GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNE 445
G + + AL+T + GM ++
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDK 629
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 194/500 (38%), Gaps = 116/500 (23%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ + N +I +C ++ + I M + L PD +Y ++ G+C +A
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ +M QK ++P TY+ L++ + L++ ML D+I+ +TL+ A
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT------GF---------------------SPAL 185
G+F++A + ++ +G+L D +T G PA+
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMP--------EM----------------------- 214
TY A+ HG +G ++EA + M EM
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 215 ----GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV--------------WGLDE 256
GL+P +Y +I+G+C + KAY EM K + + LD+
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 257 VTYA-YLMQGLSDEDTYASLINAYCAQGELFKVL------------TLDDEMSHKGSLPD 303
+ A L+Q + D D L+ Y + E + ++++ K +P+
Sbjct: 662 IDEACLLLQKIVDFDL---LLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVV 361
+++ ++ I GL K + +D + + +D + + +P+ Y LI C+
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARK----LFSDLLSSDRFIPDEYTYTILIHGCA-------- 766
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
+ G +N+A D M P+ YN LI C+ NV +A + ++ +
Sbjct: 767 -------IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 422 GFVSHMFSVLALLTALRDHG 441
G + + L+ L G
Sbjct: 820 GITPNAITYNTLIDGLVKSG 839
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 161/441 (36%), Gaps = 100/441 (22%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRR---------------------LSEAYHLFQE 135
F L Q+ PD Y ++ L R E +F+E
Sbjct: 91 FNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKE 150
Query: 136 MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
P F ++ +G A H+ M + G +P + S N + G
Sbjct: 151 FSFSP--TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIP---SLLSCNSLLSNLVRKGE 205
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD 255
F+ AL + M +SPD + IV++ +C++ + KA E + + L+
Sbjct: 206 NFV-----ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 256 EVTYAYLMQG---LSDED-------------------TYASLINAYCAQG---------E 284
VTY L+ G + D + TY SLI YC +G E
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 285 LFKVLTLDDEMSHKGSLPD------SVIDSLLI--NGLDKKARTKDTKAHLL-------- 328
L K L + G L D + D++ + N ++ RT T + L
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 329 -LIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
L+ A+ +++ M P++ Y+TL++ + G V+EA + D
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVD---------------GYCRAGYVDEALKLCD 425
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
M + P YN+L+ + R H +++ M++ G + S LL AL G
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Query: 442 MYNERSWVIQNTLRSCNLNDS 462
+NE + +N L L D+
Sbjct: 486 DFNEAMKLWENVLARGLLTDT 506
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F+ +S+ D TY +I + + K + MA KG+ P+ ++Y +I G C
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
+A ++ QKGI P+A TY++LI L ++EA L ++M+
Sbjct: 802 KLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 176/414 (42%), Gaps = 48/414 (11%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F A + +S + + ++ +I + M E+ + + R M SPD+ + ++ G
Sbjct: 119 FNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLV 175
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
R + M +G++PD Y L Q + S+ L EM S P+
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
+T + C + + +A M M GVLP+ L+TY+A+I G C G V +
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN--------LYTYSAMIDGYCKTGNVRQ 287
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A G+ + + L P+ V + ++ GFC+ REL A L V M V +G+D Y
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM---VKFGVDPNLY---- 340
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
Y LI+ +C G + + + L EM PD ++LINGL + + +
Sbjct: 341 -------VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE- 392
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV-GLVKSFSMRGLVNEAARAHDT 382
A+ ++ M N I+ S+ + S++ G K ++M +A
Sbjct: 393 --------ANRLFQKMKNERIFP------SSATYNSLIHGYCKEYNME----QALDLCSE 434
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
M +P+ ++ LI +C ++ A +Y EM G V + + AL+ A
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 46/366 (12%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F HMV+ GV +L YN +I HC + + VG+L M LSPD
Sbjct: 327 FVHMVKFGV-------------DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+Y +I G C +A +M + I P + TY+SLI C + + +A L
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
EM + P+ ITF+TL+ C + A ++ +M KG++PD V TY A+
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV--------TYTAL 485
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKV 250
I ++EAL + M E G+ P+ ++ ++ GF + L A + E + ++
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 251 VWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
W + V + L++GL C G + + +M G PD +
Sbjct: 546 CW--NHVGFTCLIEGL-------------CQNGYILRASRFFSDMRSCGITPDICSYVSM 590
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLIENCSNNEF-KSVVGLVKSFS 368
+ G ++ R DT +++ D + T +PN ++ L N + KS L S
Sbjct: 591 LKGHLQEKRITDT----MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSR 646
Query: 369 MRGLVN 374
++ + N
Sbjct: 647 LKTVSN 652
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 121/327 (37%), Gaps = 77/327 (23%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
+S LI EA + +EM PD ++++ F + + MI +
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR 193
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCF-LGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
G++PD F ++ CF G + +L M +G+ P+ Y I I
Sbjct: 194 GLVPDVHIYF---------VLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLT 290
C++ ++ +A ++ M + V L + TY+++I+ YC G + +
Sbjct: 245 CRDNKMEEAEKMFELMKKHGV--------------LPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
L E +++A+ + PN +++ TL++
Sbjct: 291 LYKE----------------------------------ILVAELL----PNVVVFGTLVD 312
Query: 351 NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK 410
G K+ R LV A M++ P+ VYN LI HC+ N+ +
Sbjct: 313 -----------GFCKA---RELVT-ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 411 AYNMYMEMVRYGFVSHMFSVLALLTAL 437
A + EM +F+ L+ L
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGL 384
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 51/396 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ + NK++K + Q +E +L + + G +P+ +++ +I GFC +A++
Sbjct: 252 IVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEG 156
M+Q+GI PD YS+LI L + LF + L D + F++ + G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ + A ++ +M+ +G+ SP + TY +I GLC GR+ EA G+ + + G+
Sbjct: 371 DLATASVVYKRMLCQGI--------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------ 270
P V+Y +I GFC+ LR + L +M K+ + D V Y L+ GLS +
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPD-SVIDSLLING 313
+ SLI+ +C + L + M G PD + +++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
+ + A K K + L + D M N I D + N V+ L+ +
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLMQR---NKISADIAVCNV-------VIHLLFKCHR---I 588
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHC--RRLN 407
+A++ + ++EG +PD YN +I +C RRL+
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/480 (20%), Positives = 200/480 (41%), Gaps = 61/480 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ T+ +I C +++ + + M ++G+ PD ++Y +I G+ G ++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
+ KG+ D +SS I L+ A +++ ML P+ +T+T L+ C +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +AF M+ Q++ +G+ P++ TY+++I G C G + + M +MG
Sbjct: 405 GRIYEAFGMYGQILKRGM--------EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV-------------W----GLDEVT 258
PD V Y +++ G + + A V+M + + W DE
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 259 YAYLMQGL----SDEDTYASLI------NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ + G+ D T+ +++ +A+C + L L D M D + +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CS---NNEFKSVVGLV 364
++I+ L K R +D +I M P+ + Y+T+I CS +E + + L+
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKME---PDIVTYNTMICGYCSLRRLDEAERIFELL 633
Query: 365 K-------SFSMRGLV---------NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
K + ++ L+ + A R M E KP+ Y L+ + +++
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 409 HKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
++ ++ EM G + S ++ L G +E + + + + L D + +L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 162/394 (41%), Gaps = 41/394 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++ + TY+ +I C + G + M + G PD + Y ++ G
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A F ++M + I + ++SLI C R EA +F+ M PD TFTT+M
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFV--TGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+E F K HM + + L D + S + N +IH L R+E+A
Sbjct: 540 VSIMEDAFCK--HMKPTIGLQ--LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ E + PD V+Y +I G+C R L +A E E+ + +G + VT L
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTIL------ 648
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
I+ C ++ + + M+ KGS P++V L +D +++ D +
Sbjct: 649 -------IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL---MDWFSKSVDIEGSFK 698
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
L P+ + Y +I+ GL K RG V+EA ++
Sbjct: 699 LFEEMQEKGISPSIVSYSIIID-----------GLCK----RGRVDEATNIFHQAIDAKL 743
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
PD Y +LI +C+ + +A +Y M+R G
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 131/330 (39%), Gaps = 68/330 (20%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI--- 82
RF+ +SI+ ++ +N +I C + R ++ + + R M G+ PD ++ V+
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 83 ---TGFCNNRCPG-----------------------------------KAYEFKLEMDQK 104
FC + P A +F + +
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEM-LSP--PDDITFTTLMHACCLEGEFSKA 161
+ PD TY+++I CS RRL EA +F+ + ++P P+ +T T L+H C + A
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
M M KG P+ VT Y ++ +E + + M E G+SP V
Sbjct: 662 IRMFSIMAEKGSKPNAVT--------YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 222 SYIIVISGFCQNRELRKAYEL-KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYC 280
SY I+I G C+ + +A + +D K+ L D YA LI YC
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKL---------------LPDVVAYAILIRGYC 758
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
G L + L + M G PD ++ L
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 173/417 (41%), Gaps = 54/417 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TY +I + + ++ K + + R M E+G+ + +Y +I GF + A+
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M ++G+ PD Y+++I A C + A +EM P TF ++H G
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ ++ + M G + P + T+N +I+GL ++E+A+ IL M G+
Sbjct: 604 DMRRSLEVFDMMRRCGCV--------PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
S + +Y ++ G+ + KA+E + + GLD D TY +L+
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE---GLD-----------VDIFTYEALL 701
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
A C G + L + EMS + +S + ++LI+G AR D LI
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW---ARRGDVWEAADLIQQMKKE 758
Query: 337 TSMPNYIIYDTLIENCSNN--------------------EFKSVVGLVKSFSMRGLVNEA 376
P+ Y + I CS K+ L+K ++ L +A
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY------NMYMEMVRYGFVSHM 427
++ M KPD AVY+ L+ R ++ +AY + EMV G + M
Sbjct: 819 LSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDM 875
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 191/453 (42%), Gaps = 55/453 (12%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y +I + + + +++ + +R M E+G+ ++Y ++ GF A + E
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTLMHACCLEGEF 158
+ +A Y +I A C + A L +EM + P I + T+M + +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI-YHTMMDGYTMVADE 465
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
K + ++ GF+P + TY +I+ +G++ +AL + R M E G+
Sbjct: 466 KKGLVVFKRLKE--------CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ---GLSDED----- 270
+ +Y ++I+GF + ++ A+ + +M ++ + D + Y ++ G+ + D
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM-KPDVILYNNIISAFCGMGNMDRAIQT 576
Query: 271 --------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
T+ +I+ Y G++ + L + D M G +P + LINGL +
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 317 KARTKDTKAHLL--LIIA-----DYMYTS-MPNY---------IIYDTLIENCS-NNEFK 358
K R + +L + +A ++ YT M Y Y T ++N + +
Sbjct: 637 K-RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ L+K+ G + A M N + VYN+LI RR +V +A ++ +M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
+ G + + + ++A G N + I+
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIE 788
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++T ++ + + G + +E + D+ TY ++K C R++ + + + M
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ + + ++ Y +I G+ +A + +M ++G+ PD TY+S I A +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
+ A +EM + P+ T+TTL+ KA + +M G+ PD
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 138/354 (38%), Gaps = 55/354 (15%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A E M +GI P + Y+SLI A R + EA ++M +++ T
Sbjct: 327 RARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY---S 383
Query: 153 CLEGEFSKAFHM--------HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+ G FSKA H + IHK + Y II+ C +E A
Sbjct: 384 VIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI----------YGKIIYAHCQTCNMERA 433
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
++R M E G+ Y ++ G+ + +K V R L E + +
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL---VVFKR-----LKECGFTPTVV 485
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
TY LIN Y G++ K L + M +G + S++ING + KD
Sbjct: 486 ------TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF---VKLKDW- 535
Query: 325 AHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
A+ + D + M P+ I+Y+ +I +F G ++ A + M
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNII---------------SAFCGMGNMDRAIQTVKEM 580
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+ ++P + +I + + ++ ++ ++ M R G V + + L+ L
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 181/416 (43%), Gaps = 62/416 (14%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ + NK++K + Q +E +L + + G +P+ +++ +I GFC +A++
Sbjct: 252 IVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEG 156
M+Q+GI PD YS+LI L + LF + L D + F++ + G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ + A ++ +M+ +G+ SP + TY +I GLC GR+ EA G+ + + G+
Sbjct: 371 DLATASVVYKRMLCQGI--------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------ 270
P V+Y +I GFC+ LR + L +M K+ + D V Y L+ GLS +
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ SLI+ +C + L + M G PD + ++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGL----------- 363
+ R ++ L L + P+ + Y TLI+ + K +GL
Sbjct: 542 IMEGRLEEA---LFLFFRMFKMGLEPDALAYCTLIDAFCKH-MKPTIGLQLFDLMQRNKI 597
Query: 364 -----VKSFSMRGL-----VNEAARAHDTMLEGNYKPDGAVYNLLIFDHC--RRLN 407
V + + L + +A++ + ++EG +PD YN +I +C RRL+
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 194/469 (41%), Gaps = 54/469 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I ++ TY +IK C R+ + G+ + ++G+ P ++Y +I GFC +C
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC--KCGNL 442
Query: 94 AYEFKL--EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTL 148
F L +M + G PD Y L+ L + + A +ML + + F +L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C F +A + M G+ PD T+ ++ GR+EEAL +
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVA--------TFTTVMRVSIMEGRLEEALFLF 554
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT---------- 258
M +MGL PDA++Y +I FC++ + +L M R + V
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 259 ---------YAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
+ L++G + D TY ++I YC+ L + + + + P++V
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
++LI+ L K D + I+A+ S PN + Y C + F V + SF
Sbjct: 675 TILIHVLCKN-NDMDGAIRMFSIMAE--KGSKPNAVTY-----GCLMDWFSKSVDIEGSF 726
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
+ + M E P Y+++I C+R V +A N++ + + + +
Sbjct: 727 KL----------FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 428 FSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKF 476
+ L+ G E + + ++ LR+ D L + L+E + K+
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKW 825
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 25/311 (8%)
Query: 20 RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R + RF I + T N ++ +C +++KG+ +L+ M G +SY
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
+I G C A + K M + G+ P+ T+++LI C +L EA +F EM +
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P+ +T+ TL++ +G+ AF + M+ G+ D + TYNA+I GLC
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLC 389
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
+ +A ++ + + L P++ ++ +I G C + + +EL M R
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH---- 445
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+E T+ L++A+C + + EM + DS + NGL
Sbjct: 446 ----------PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKH 495
Query: 317 KARTKDTKAHL 327
+ + + K L
Sbjct: 496 QGKDQLVKKLL 506
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 61/381 (16%)
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++M G LP + ++ + +L + R+ A ++EM P+ T +M C
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ K + M GF +YN +I G C G + AL + M + G
Sbjct: 252 GKLDKGIELLQDMER--------LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L P+ V++ +I GFC+ +L++A KV + V A + TY +L
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEA--------SKVFGEMKAVNVA------PNTVTYNTL 349
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
IN Y QG+ ++M G D + + LI GL K+A+T+ + + + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+PN + LI + V+ + RG + +M+ P+ +
Sbjct: 410 ---VPNSSTFSALI----------MGQCVRKNADRGF-----ELYKSMIRSGCHPNEQTF 451
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
N+L+ CR + A + EMVR +V + L+ G
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG-------------- 497
Query: 456 SCNLNDSELHKVLNEIDTRKF 476
D + K+L E++ +KF
Sbjct: 498 ----KDQLVKKLLQEMEGKKF 514
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 25/311 (8%)
Query: 20 RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R + RF I + T N ++ +C +++KG+ +L+ M G +SY
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
+I G C A + K M + G+ P+ T+++LI C +L EA +F EM +
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P+ +T+ TL++ +G+ AF + M+ G+ D + TYNA+I GLC
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLC 389
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
+ +A ++ + + L P++ ++ +I G C + + +EL M R
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH---- 445
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+E T+ L++A+C + + EM + DS + NGL
Sbjct: 446 ----------PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKH 495
Query: 317 KARTKDTKAHL 327
+ + + K L
Sbjct: 496 QGKDQLVKKLL 506
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 61/381 (16%)
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++M G LP + ++ + +L + R+ A ++EM P+ T +M C
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ K + M GF +YN +I G C G + AL + M + G
Sbjct: 252 GKLDKGIELLQDMER--------LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L P+ V++ +I GFC+ +L++A KV + V A + TY +L
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEA--------SKVFGEMKAVNVA------PNTVTYNTL 349
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
IN Y QG+ ++M G D + + LI GL K+A+T+ + + + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+PN + LI + V+ + RG + +M+ P+ +
Sbjct: 410 ---VPNSSTFSALI----------MGQCVRKNADRGF-----ELYKSMIRSGCHPNEQTF 451
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
N+L+ CR + A + EMVR +V + L+ G
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG-------------- 497
Query: 456 SCNLNDSELHKVLNEIDTRKF 476
D + K+L E++ +KF
Sbjct: 498 ----KDQLVKKLLQEMEGKKF 514
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TY I HC + V+ + + M + G + +SY +I G + +A
Sbjct: 189 DYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLL 248
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
++M P+ TY+ LI ALC + SEA +LF++M PDD +T L+ + C
Sbjct: 249 VKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSG 308
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+A + M+ G++P+ + TYNA+I G C V +A+G+L M E
Sbjct: 309 DTLDEASGLLEHMLENGLMPNVI--------TYNALIKGFC-KKNVHKAMGLLSKMLEQN 359
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYEL 242
L PD ++Y +I+G C + L AY L
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRL 386
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 28/272 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D+ T+N ++ +C + V + + + + G PD +Y ITG C + A+
Sbjct: 151 VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAF 210
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ EM Q G + +Y+ LI L +++ EA L +M P+ T+T L+ A
Sbjct: 211 KVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDAL 270
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C G+ S+A ++ QM G+ PD Y +I C ++EA G+L M
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDC--------MYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDT 271
E GL P+ ++Y +I GFC+ + + KA L +M L Q L D T
Sbjct: 323 ENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKM---------------LEQNLVPDLIT 366
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
Y +LI C+ G L L M G +P+
Sbjct: 367 YNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 147/355 (41%), Gaps = 57/355 (16%)
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--- 138
+ FC G ++E K ++ K Y++L+ +L + E L+ EML
Sbjct: 99 VVDFCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLV 151
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
PD TF TL++ C G +A +I G P FTY + I G C
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC--------DPDYFTYTSFITGHCRR 203
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
V+ A + + M + G + VSY +I G + +++ +A L V+M
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD--------- 254
Query: 259 YAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+ TY LI+A C G+ + + L +MS G PD + ++LI
Sbjct: 255 -----NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF-CSG 308
Query: 319 RTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNE 375
T D + LL ++M + MPN I Y+ LI+ C N K++ GL+++
Sbjct: 309 DTLDEASGLL----EHMLENGLMPNVITYNALIKGFCKKNVHKAM----------GLLSK 354
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
MLE N PD YN LI C N+ AY + M G V + +V
Sbjct: 355 -------MLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
HM+ NG++ ++ TYN +IK C + V K +G+L M E+ L PD
Sbjct: 318 LEHMLENGLM-------------PNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPD 363
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
++Y +I G C++ AY M++ G++P+ T
Sbjct: 364 LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKA 94
++++ + N ++ C +RVE+ +L + + ++P+A ++ I G+C NR
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEAL 244
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHA 151
+ + EM G P +Y+++I+ C + + Y + EM SPP+ IT+TT+M +
Sbjct: 245 WTIQ-EMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-G 210
+ EF +A + +M G PD +LF YN +IH L GR+EEA + R
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPD-------SLF-YNCLIHTLARAGRLEEAERVFRVE 355
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG----- 265
MPE+G+S + +Y +I+ +C + E KA EL EM+ + D TY L++
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 266 -----------------LS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
LS DE TY LI C L +EM + P
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTC 475
Query: 308 SLLINGLDKK 317
LL+ + KK
Sbjct: 476 LLLLEEVKKK 485
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 35/307 (11%)
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
VL + +P T+N IHG C RVEEAL ++ M G P +SY +I +CQ
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
E K YE+ EM+ + +TY +M L+ AQ E + L +
Sbjct: 272 QFEFIKVYEMLSEMEANGS-PPNSITYTTIMSSLN-------------AQKEFEEALRVA 317
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTK-------AHLLLIIADYMYTSMPNYIIY 345
M G PDS+ + LI+ L + R ++ + L + I Y SM +
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 346 ----DTLIE--------NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY-KPDG 392
D IE N N + + L++S RG V E + M+ ++ D
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE 437
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
+ Y LI CR AY ++ EM+ + L LL ++ M+ E + I++
Sbjct: 438 STYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMH-ESAERIEH 496
Query: 453 TLRSCNL 459
+++ L
Sbjct: 497 IMKTVKL 503
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKA 94
++++ + N ++ C +RVE+ +L + + ++P+A ++ I G+C NR
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEAL 244
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHA 151
+ + EM G P +Y+++I+ C + + Y + EM SPP+ IT+TT+M +
Sbjct: 245 WTIQ-EMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-G 210
+ EF +A + +M G PD +LF YN +IH L GR+EEA + R
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPD-------SLF-YNCLIHTLARAGRLEEAERVFRVE 355
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG----- 265
MPE+G+S + +Y +I+ +C + E KA EL EM+ + D TY L++
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 266 -----------------LS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
LS DE TY LI C L +EM + P
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTC 475
Query: 308 SLLINGLDKK 317
LL+ + KK
Sbjct: 476 LLLLEEVKKK 485
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 35/307 (11%)
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
VL + +P T+N IHG C RVEEAL ++ M G P +SY +I +CQ
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
E K YE+ EM+ + +TY +M L+ AQ E + L +
Sbjct: 272 QFEFIKVYEMLSEMEANGS-PPNSITYTTIMSSLN-------------AQKEFEEALRVA 317
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTK-------AHLLLIIADYMYTSMPNYIIY 345
M G PDS+ + LI+ L + R ++ + L + I Y SM +
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 346 ----DTLIE--------NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY-KPDG 392
D IE N N + + L++S RG V E + M+ ++ D
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE 437
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
+ Y LI CR AY ++ EM+ + L LL ++ M+ E + I++
Sbjct: 438 STYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMH-ESAERIEH 496
Query: 453 TLRSCNL 459
+++ L
Sbjct: 497 IMKTVKL 503
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 164/397 (41%), Gaps = 60/397 (15%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYEFKLEMDQK 104
+I ++C + + +G L M KGL + + ++ +C + C +FK E
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK-EFRDM 382
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKA 161
I D Y+ AL R+ EA+ L QEM PD I +TTL+ CL+G+ A
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
+ +MI G+ PD L TYN ++ GL G EE L I M G P+AV
Sbjct: 443 LDLIDEMIGNGMSPD--------LITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 494
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCA 281
+ ++I G C R++++A + +++K + AS + YC
Sbjct: 495 TNSVIIEGLCFARKVKEAEDFFSSLEQKC------------------PENKASFVKGYCE 536
Query: 282 QG---ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
G + +K + E + S+ + SL I G +KA K Y
Sbjct: 537 AGLSKKAYKAF-VRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS--------AYRV 587
Query: 339 MPNYIIYDTLIENCSNNEFKSVVG-LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P +S+ G ++ +F V EA DTM+E PD Y +
Sbjct: 588 EPG----------------RSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+I +CR + KA +++ +M + G + + LL
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 164/406 (40%), Gaps = 36/406 (8%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+ Y +I +CL +V + ++ M G+SPD ++Y +++G N +
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ--EMLSPPDDITFTTLMHACC 153
E M +G P+A T S +I+ LC R++ EA F E P + +F
Sbjct: 479 EIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAG 538
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
L + KAF + K V Y + LC G +E+A +L+ M
Sbjct: 539 LSKKAYKAFVRLEYPLRKSV--------------YIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+ P +I FC+ +R+A +V D V GL + D TY
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREA---QVLFDTMVERGL-----------IPDLFTYT 630
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+I+ YC EL K +L ++M +G PD V ++L LD+ + D + H +
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL---LDRYLKL-DPEHHETCSVQG 686
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ + ++ + + V + + M L +AA D M++ +PD
Sbjct: 687 EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNL-EQAAELFDRMIDSGLEPDMV 745
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMV-RYGFVSHMFSVLALLTALR 438
Y LI + R+ + A + E+ +Y S F AL+
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALK 791
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 156/391 (39%), Gaps = 65/391 (16%)
Query: 43 YNKIIKQHCLMQRVEKGVG-ILRGMAEKGLSPDALS--YRYVITGFCNNRCPGKAYEFKL 99
Y I C+ EK V IL + K L+ D L V+ GFCN A +
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI--TFTTLMHAC----- 152
EM++ G D + ++I C L EA +ML + +L+ C
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 153 -CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
CLE A + + D V YN L LGRVEEA +L+ M
Sbjct: 368 MCLE-----ALEKFKEFRDMNIFLDRV--------CYNVAFDALSKLGRVEEAFELLQEM 414
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DED 270
+ G+ PD ++Y +I G+C ++ A +L EM + G+S D
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM---------------IGNGMSPDLI 459
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY L++ G +VL + + M +G P++V +S++I GL + K+ +
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE------ 513
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
D+ + +L + C N+ VK + GL + +A+ + Y
Sbjct: 514 --DF----------FSSLEQKCPENK----ASFVKGYCEAGL---SKKAYKAFVRLEYPL 554
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
+VY L F C + KA+++ +M Y
Sbjct: 555 RKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 58/354 (16%)
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL------EMDQKGILPDA 110
E+ + + M E GL P+ ++Y VI + C EFK EM + G+ PD
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVI-----DACGKGGMEFKQVAKFFDEMQRNGVQPDR 339
Query: 111 FTYSSLIQALCSKRRLSEA-YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHH 166
T++SL+ A+CS+ L EA +LF EM + D ++ TL+ A C G+ AF +
Sbjct: 340 ITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
QM K ++P+ V+ Y+ +I G GR +EAL + M +G++ D VSY +
Sbjct: 399 QMPVKRIMPNVVS--------YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
+S + + +A ++ EM G+ + D TY +L+ Y QG+
Sbjct: 451 LSIYTKVGRSEEALDILREM---ASVGIKK-----------DVVTYNALLGGYGKQGKYD 496
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIY 345
+V + EM + LP+ + S LI+G K K+ + I ++ + + ++Y
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA----MEIFREFKSAGLRADVVLY 552
Query: 346 DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
LI+ N GLV A D M + P+ YN +I
Sbjct: 553 SALIDALCKN---------------GLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F K F M RNGV Q D T+N ++ E + M
Sbjct: 320 FKQVAKFFDEMQRNGV-------------QPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ + D SY ++ C A+E +M K I+P+ +YS++I R
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 128 EAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
EA +LF EM D +++ TL+ G +A + +M G+ D V
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV------ 480
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
TYNA++ G G+ +E + M + P+ ++Y +I G+ + ++A E+
Sbjct: 481 --TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 245 EMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
E + GL +D Y++LI+A C G + ++L DEM+ +G P+
Sbjct: 539 E---------------FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 304 SVIDSLLINGLDKKA 318
V + +I+ + A
Sbjct: 584 VVTYNSIIDAFGRSA 598
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 116/293 (39%), Gaps = 44/293 (15%)
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ-NRE 235
F G+ ++ ++A+I G EEA+ + M E GL P+ V+Y VI + E
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLM------------QGLSDEDT----------YA 273
++ + EM R V D +T+ L+ + L DE T Y
Sbjct: 320 FKQVAKFFDEMQRNGVQP-DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+L++A C G++ + +M K +P+ V S +I+G K R + L + +
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA----LNLFGE 434
Query: 334 YMYTSMP-NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
Y + + + Y+TL+ ++ G EA M K D
Sbjct: 435 MRYLGIALDRVSYNTLL---------------SIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN L+ + ++ + ++ EM R + ++ + L+ G+Y E
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 168/378 (44%), Gaps = 48/378 (12%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMH 150
KA E EM + G+ PD + + L+ ALC + EA +F++M PP+ FT+L++
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLY 244
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C EG+ +A + QM G+ PD V + ++ G G++ +A ++
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIV--------VFTNLLSGYAHAGKMADAYDLMND 296
Query: 211 MPEMGLSPDAVSYIIVISGFCQN-RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M + G P+ Y ++I C+ + + +A + VEM+R +G + +D
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER---YGCE-----------ADI 342
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +LI+ +C G + K ++ D+M KG +P V ++ +KK + ++ L L
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC---LEL 399
Query: 330 IIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
I P+ +IY+ +I + G V EA R + M
Sbjct: 400 IEKMKRRGCHPDLLIYNVVI---------------RLACKLGEVKEAVRLWNEMEANGLS 444
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG-FVSHMFSVL-ALLTAL-RDHGMYNER 446
P + ++I + + +A N + EMV G F + + L +LL L RD + +
Sbjct: 445 PGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAK 504
Query: 447 S-W-VIQNTLRSCNLNDS 462
W I N SC LN S
Sbjct: 505 DVWSCISNKTSSCELNVS 522
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E +L + ++ C ++ + +L M E GL PD + + +++G+ +
Sbjct: 230 EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALC-SKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
AY+ +M ++G P+ Y+ LIQALC +++R+ EA +F EM D +T+T L+
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFS 182
C G K + + M KGV+P VT G
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
P L YN +I C LG V+EA+ + M GLSP +++I+I+GF
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 149/346 (43%), Gaps = 39/346 (11%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N E I+ +L + ++++ V+K V +L M + GL PD + ++ C N
Sbjct: 161 NPELIEPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + +M +K P+ ++SL+ C + +L EA + +M PD + FT L
Sbjct: 219 KEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL-GRVEEALGI 207
+ G+ + A+ + + M + GF P + Y +I LC R++EA+ +
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKR--------GFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
M G D V+Y +ISGFC+ + K Y + +M +K V +VTY +M
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP-SQVTYMQIMVAHE 388
Query: 268 DEDT----------------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
++ Y +I C GE+ + + L +EM G P
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
++ING + + H +++ ++++ P Y +L+ N
Sbjct: 449 TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA-PQYGTLKSLLNN 493
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 12/213 (5%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQ-RVEKGVGILRGM 66
FT L + H + + ++ Y +I+ C + R+++ + + M
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G D ++Y +I+GFC K Y +M +KG++P TY ++ A K +
Sbjct: 334 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
E L ++M PD + + ++ C GE +A + ++M G SP
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM--------EANGLSP 445
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ T+ +I+G G + EA + M G+
Sbjct: 446 GVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 53/337 (15%)
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P LF ++ V++A+ +L MP+ GL PD + ++ C+N +++A
Sbjct: 165 IEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
++ +M K L + SL+ +C +G+L + + +M G
Sbjct: 223 KVFEDMREKFPPNL---------------RYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 267
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKS 359
PD V+ + L++G + D ++ D PN Y LI+ E +
Sbjct: 268 EPDIVVFTNLLSGYAHAGKMADAYD----LMNDMRKRGFEPNVNCYTVLIQALCRTEKR- 322
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
++EA R M + D Y LI C+ + K Y++ +M
Sbjct: 323 -------------MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR----------------SCNLND-S 462
+ G + + + ++ A + E +I+ R +C L +
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 463 ELHKVLNEIDTRKFPPIGATLLDVLAEIAMDGLLLDG 499
E ++ NE++ P T + ++ G L++
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 185/450 (41%), Gaps = 59/450 (13%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
FT + I D+ TY ++K L R+ G +L+ M G++P+A+ Y ++ C
Sbjct: 169 FTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALC 228
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
N G+A EM + P+ T++ LI A C++++L ++ L ++ S PD +
Sbjct: 229 KNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVV 284
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
T T +M C EG S+A + ++ KG D V N ++ G C LG++
Sbjct: 285 TVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVV--------ACNTLVKGYCALGKMRV 336
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV-WGLDEVTYAYL 262
A M G P+ +Y ++I+G+C L A + +M + W T+ L
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF--ATFNTL 394
Query: 263 MQGLS----------------DEDT-YASLINAY-CAQGELFKVLTLDDEMSH----KGS 300
++GLS D DT + + I+ Y C +K +D + +
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSV 360
P +V S + L +K D K +I + +P+ I+ LI
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGE---GGVPSIIVSHCLIHR--------- 502
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
+S G + E+ + M+ Y P + +N +I C++ V +M
Sbjct: 503 ------YSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVI 450
G V S LL L G +++W++
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDI-QKAWLL 585
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 45/428 (10%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
R M G+ D +Y ++ G G ++ M G+ P+A Y++L+ ALC
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 124 RRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD--FVTGF 181
++ A L EM P+D+TF L+ A C E ++I VL + F GF
Sbjct: 231 GKVGRARSLMSEM-KEPNDVTFNILISAYCNE----------QKLIQSMVLLEKCFSLGF 279
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P + T ++ LC GRV EAL +L + G D V+ ++ G+C ++R A
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
+EM+RK Y L + +TY LI YC G L L ++M
Sbjct: 340 FFIEMERK----------GY----LPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR 385
Query: 302 PDSVIDSLLINGLDKKARTKD-TKAHLLLIIADYMYTSM--P-NYIIYDTLIENCSNNEF 357
+ + LI GL RT D K ++ +D ++ + P N +IY EN +
Sbjct: 386 WNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDAL 445
Query: 358 KSVVGLVKSFSM-------------RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+ ++ + K F +G +++ A+D M+ P V + LI + +
Sbjct: 446 EFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQ 505
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL-RDHGMYNERSWVIQNTLRSCNLNDSE 463
+ ++ + +MV G++ + A++ + + N +V R C +
Sbjct: 506 HGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTES 565
Query: 464 LHKVLNEI 471
+ +L E+
Sbjct: 566 YNPLLEEL 573
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 171/420 (40%), Gaps = 64/420 (15%)
Query: 18 MVRNGVVCRFTAARN--SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDA 75
+ +NG V R AR+ SE + + T+N +I +C Q++ + + +L G PD
Sbjct: 227 LCKNGKVGR---ARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
++ V+ CN +A E ++ KG D ++L++ C+ ++ A F E
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
M P+ T+ L+ C G A + M + +F T+N +I
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA--------TFNTLI 395
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAV------SYIIVISGFCQNRELRKAYELKVEM 246
GL GR ++ L IL EM D V Y VI GF + A E ++M
Sbjct: 396 RGLSIGGRTDDGLKIL----EMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
++ +D + + + C +G + + T D+M +G +P ++
Sbjct: 452 EKLFPRAVDR----------------SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIV 495
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLIEN-CSNNEFKSVVGLV 364
LI+ + + +++ L +I D + +P ++ +I C ++ + + V
Sbjct: 496 SHCLIHRYSQHGKIEES----LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV 551
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ + RG V PD YN L+ + C + ++ KA+ ++ MV V
Sbjct: 552 EDMAERGCV----------------PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 133/369 (36%), Gaps = 71/369 (19%)
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTT 147
G F+ G + TY +L LC RR Y L EM PPDD F T
Sbjct: 58 GALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVT 117
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDF---------------------------VTG 180
++ + + + G+ P +G
Sbjct: 118 IIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASG 177
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
++TY ++ GL R+ + +L+ M G++P+AV Y ++ C+N ++ +A
Sbjct: 178 IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
L EM ++ T+ LI+AYC + +L + + L ++ G
Sbjct: 238 SLMSEMKE------------------PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSV 360
+PD V + ++ L + R + + + + + +
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALE------------------VLERVESKGGKVDVVAC 321
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM-- 418
LVK + G + A R M Y P+ YNLLI +C + A + + +M
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 419 --VRYGFVS 425
+R+ F +
Sbjct: 382 DAIRWNFAT 390
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 46 IIKQHCLMQR------VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
II HCL+ R +E+ + ++ M +G P + ++ VI GFC +F
Sbjct: 493 IIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVE 552
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
+M ++G +PD +Y+ L++ LC K + +A+ LF M+ PD +++LM CL
Sbjct: 553 DMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMF--CLSQ 610
Query: 157 EFSKAFHMHHQM 168
+ A H++ +
Sbjct: 611 K--TAIHVNSSL 620
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 132/322 (40%), Gaps = 79/322 (24%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE-MGLSPDAVSYIIVISGFCQNRELRK 238
GF + TY A+ H LC R + +L MP+ +GL PD ++ +I GF + R +++
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 239 AYE------------------------LKVEMD-------RKVVW-GL--DEVTYAYLMQ 264
+K ++D RK++ G+ D TY LM+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
GL SL N G+ FK+L + M G P++V+ + L++ L K + +
Sbjct: 191 GL-------SLTNRI---GDGFKLLQI---MKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 325 AHLLLIIADYMYTSM--PNYIIYDTLIENCSNNE--FKSVVGLVKSFSM----------- 369
+ + + M PN + ++ LI N + +S+V L K FS+
Sbjct: 238 S---------LMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 370 -------RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
G V+EA + + K D N L+ +C + A ++EM R G
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 423 FVSHMFSVLALLTALRDHGMYN 444
++ ++ + L+ D GM +
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLD 370
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 25/290 (8%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
CR S ++ Y +++ QR +G L+ M GL SY VI
Sbjct: 374 TCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVID 433
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PP 140
C R A F EM +GI P+ T+++ + + + + + + +++L P
Sbjct: 434 CLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKP 493
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D ITF+ +++ C E AF +M+ G+ P+ +T YN +I C G
Sbjct: 494 DVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT--------YNILIRSCCSTGD 545
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
+ ++ + M E GLSPD +Y I FC+ R+++KA EL M R GL
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLR---IGLK----- 597
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
D TY++LI A G + + + G +PDS L+
Sbjct: 598 ------PDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 185/479 (38%), Gaps = 53/479 (11%)
Query: 6 DSFTATLKTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
D FT + + + GVV R E + ++ TY +I + RV++ +
Sbjct: 214 DRFTYNI-LIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
L M + L+P+ + R + G P KA+E + +K Y +++ L +
Sbjct: 273 LEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSN 332
Query: 123 KRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD-FV 178
E +++ PD TF M +C L+G H ++ + D FV
Sbjct: 333 NSMAKETGQFLRKIGERGYIPDSSTFNAAM-SCLLKG---------HDLVETCRIFDGFV 382
Query: 179 T-GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ G P Y ++ L R E L+ M GL SY VI C+ R +
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 238 KAYELKVEM-DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMS 296
A EM DR + L T+ + ++ Y +G++ KV + +++
Sbjct: 443 NAAMFLTEMQDRGISPNLV---------------TFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
G PD + SL+IN L R K+ K + PN I Y+ LI +C +
Sbjct: 488 VHGFKPDVITFSLIINCL---CRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST- 543
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
G + + + M E PD YN I C+ V KA +
Sbjct: 544 --------------GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRK 475
M+R G F+ L+ AL + G +E + + R + DS +++ E+D RK
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRK 648
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 41/162 (25%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHM 164
G+ P Y+++I AL L AY FQ+M S
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRS-------------------------- 208
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
G P FTYN +IHG+C G V+EA+ +++ M + G P+ +Y
Sbjct: 209 --------------DGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYT 254
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
I+I GF + +A + ++EM R +E T + G+
Sbjct: 255 ILIDGFLIAGRVDEALK-QLEMMRVRKLNPNEATIRTFVHGI 295
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TYN +I +C ++E ++ M E + P+ ++ ++ G C + A F ++
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M+++G+ + TY +LI A CS + +A + +++ML PD + L+ C
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A + ++ +G GFS L YN +I C E+ +L M + G
Sbjct: 527 DHDAIRVVEKL-KEG-------GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD+++Y +IS F ++++ + +M GLD TY ++I+
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMRED---GLDPTV-----------TTYGAVID 624
Query: 278 AYCAQGELFKVLTLDDEMS-HKGSLPDSVIDSLLINGLDK 316
AYC+ GEL + L L +M H P++VI ++LIN K
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 32/269 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E ++ ++ TY +I C + VEK + M E G SPDA Y +I+G C R
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A ++ + G D Y+ LI C K + Y + +M PD IT+ TL+
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+F M QM G+ P + TY A+I C +G ++EAL + +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGL--------DPTVTTYGAVIDAYCSVGELDEALKLFK- 640
Query: 211 MPEMGL----SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+MGL +P+ V Y I+I+ F + +A LK EM K+V E TY L + L
Sbjct: 641 --DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE-TYNALFKCL 697
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEM 295
+++ QGE +L L DEM
Sbjct: 698 NEK-----------TQGE--TLLKLMDEM 713
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 157/411 (38%), Gaps = 89/411 (21%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
++ RF+ S + + + I C R IL + + +A + +
Sbjct: 245 ALISRFS----SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----- 136
++ N + + L+MD+ I PD T LI LC RR+ EA +F++M
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 137 ----LSPPDDITFTTLMHACCLEGEFSKAFHMHHQM-IHKGVLPDFVTGFSPALFTYNAI 191
+ D I F TL+ C G +A + +M + + +P+ VT YN +
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT--------YNCL 412
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I G C G++E A ++ M E + P+ V+ ++ G C++ L A ++M+++ V
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
G + TY +LI+A C+ + K + ++M G PD+ I LI
Sbjct: 473 KG--------------NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+GL + R D
Sbjct: 519 SGLCQVRRDHD------------------------------------------------- 529
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
A R + + EG + D YN+LI C + N K Y M +M + G
Sbjct: 530 ----AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 50/323 (15%)
Query: 126 LSEAYHLFQEMLS-----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT- 179
+ +A+ + EML PP+ IT ++H + + ++I ++ F +
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEV-----WKERLLTEEKII--ALISRFSSH 253
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G SP I LC R A IL + + +A + ++S +N ++ +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+L ++MD ++ D T LIN C + + L + ++M K
Sbjct: 314 NDLVLKMDE--------------VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 300 SLPDSVI--DSL----LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCS 353
+ +VI DS+ LI+GL K R K+ A LL+ +PN + Y NC
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKE--AEELLVRMKLEERCVPNAVTY-----NC- 411
Query: 354 NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
L+ + G + A M E KP+ N ++ CR ++ A
Sbjct: 412 ---------LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 414 MYMEMVRYGFVSHMFSVLALLTA 436
+M+M + G ++ + + L+ A
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 176/430 (40%), Gaps = 66/430 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TYN ++ + R ++ + +L M G SP ++Y +I+ + + +A E K
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+M +KG PD FTY++L+ ++ A +F+EM + P+ TF +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G+F++ + ++ G+ PD VT GF P T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N +I G E+A+ + R M + G++PD +Y V++ R
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA----------------R 536
Query: 249 KVVWGLDEVTYAYLMQGL--SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+W E A + G +E TY SL++AY E+ + +L +E+ P +V+
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
L+ K LL A+ ++ L E + + ++ +V
Sbjct: 597 LKTLVLVCSKCD---------LLPEAERAFSE---------LKERGFSPDITTLNSMVSI 638
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
+ R +V +A D M E + P A YN L++ H R + K+ + E++ G
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 427 MFSVLALLTA 436
+ S ++ A
Sbjct: 699 IISYNTVIYA 708
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 179/440 (40%), Gaps = 78/440 (17%)
Query: 33 SESIQQDLATYNKII---KQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
S+ I D TYN +I K+ L Q + + M G S D ++Y ++ + +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQ---VFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFT 146
P +A + EM G P TY+SLI A L EA L +M + PD T+T
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
TL+ G+ A + +M + G P+ + T+NA I G+ E +
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPN--------ICTFNAFIKMYGNRGKFTEMMK 440
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
I + GLSPD V++ +++ F QN MD +V E+ A +
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQN-----------GMDSEVSGVFKEMKRAGF---V 486
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD-----SVIDSLLINGLDKK---- 317
+ +T+ +LI+AY G + +T+ M G PD +V+ +L G+ ++
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 318 -ARTKDTKAH--------------------LLLIIADYMYTSM--PNYIIYDTLIENCSN 354
A +D + L+ +A+ +Y+ + P ++ TL+ CS
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
+ L+ EA RA + E + PD N ++ + RR V KA +
Sbjct: 607 CD---------------LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 415 YMEMVRYGFVSHMFSVLALL 434
M GF M + +L+
Sbjct: 652 LDYMKERGFTPSMATYNSLM 671
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 161/401 (40%), Gaps = 46/401 (11%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
RV + G+ E G S D SY +I+ F N+ +A +M++ G P TY+
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 115 SLIQALCS-KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
++ ++ L ++M S PD T+ TL+ CC G HQ
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSL-------HQEAA 299
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+ GFS TYNA++ R +EA+ +L M G SP V+Y +IS +
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLT 290
++ L +A ELK +M K D TY +L++ + G++ ++
Sbjct: 360 ARDGMLDEAMELKNQMAEKGT--------------KPDVFTYTTLLSGFERAGKVESAMS 405
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLI 349
+ +EM + G P+ N K + ++ I + + P+ + ++TL+
Sbjct: 406 IFEEMRNAGCKPNICT----FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 350 ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
F G+ +E + M + P+ +N LI + R +
Sbjct: 462 ---------------AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+A +Y M+ G + + +L AL GM+ + V+
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ T N ++ + Q V K G+L M E+G +P +Y ++ + GK+ E
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
E+ KGI PD +Y+++I A C R+ +A +F EM + PD IT+ T + + +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
F +A + MI G P+ TYN+I+ G C L R +EA
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPN--------QNTYNSIVDGYCKLNRKDEA 788
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 191/470 (40%), Gaps = 63/470 (13%)
Query: 2 KLLRDSFTATLKTFRHMV----RNGVVCRFTAARNS---ESIQQDLATYNKIIKQHCLMQ 54
+++ + F+ ++ T+ ++ R+G++ +N + + D+ TY ++
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+VE + I M G P+ ++ I + N + + E++ G+ PD T++
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
+L+ SE +F+EM P+ TF TL+ A G F +A ++ +M+
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV PD L TYN ++ L G E++ +L M + P+ ++Y ++ +
Sbjct: 519 GVTPD--------LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 232 QNRELRKAYELKVEMDRKVVWG-----------------LDEVTYAY---LMQGLS-DED 270
+E+ + L E+ V+ L E A+ +G S D
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
T S+++ Y + + K + D M +G P + L+ + A ++ L I
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 331 IADYMYTSMPNYIIYDTLI-ENCSNNEFKSVVGLVKSFSMRGLVNE--------AARAHD 381
+A + P+ I Y+T+I C N + + G+V + + A D
Sbjct: 691 LAKGI---KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 382 TMLEGNY-----------KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
+M E +P+ YN ++ +C +LN +++E +R
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC-KLNRKDEAKLFVEDLR 796
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 171/391 (43%), Gaps = 64/391 (16%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-------PPDDITF 145
KA E M Q+G +PD ++++LI A L+ +L E+L PD IT+
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP--NLAVELLDMVRNSGLRPDAITY 300
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII--HGLCFLGRVEE 203
TL+ AC + A + M PD L+TYNA+I +G C G E
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPD--------LWTYNAMISVYGRC--GLAAE 350
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A + + G PDAV+Y ++ F + R K E+ +M +K+ +G DE+TY
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM-QKMGFGKDEMTYN--- 406
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH-KGSLPDSVIDSLLINGLDKKARTKD 322
++I+ Y QG+L L L +M G PD++ ++LI+ L K RT +
Sbjct: 407 ----------TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
A + + M + I TL ++ L+ ++ G EA
Sbjct: 457 AAA---------LMSEMLDVGIKPTL---------QTYSALICGYAKAGKREEAEDTFSC 498
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV-SHMFSVLALLTALRDHG 441
ML KPD Y++++ R KA+ +Y +M+ G S+ L +L ++++
Sbjct: 499 MLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKEN- 557
Query: 442 MYNERSWVIQNTLRS----CNLNDSELHKVL 468
RS IQ T+R C +N E+ VL
Sbjct: 558 ----RSDDIQKTIRDMEELCGMNPLEISSVL 584
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 29/299 (9%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
RNS ++ D TYN ++ ++ V + M PD +Y +I+ +
Sbjct: 289 RNS-GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR---RLSEAYHLFQEMLSPPDDITFTT 147
+A +E++ KG PDA TY+SL+ A +R ++ E Y Q+M D++T+ T
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
++H +G+ A ++ M KG ++G +P TY +I L R EA +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDM--KG-----LSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
+ M ++G+ P +Y +I G+ + + +A E T++ +++ +
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEA----------------EDTFSCMLRSGT 504
Query: 268 DED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
D Y+ +++ E K L +M G P + L+I GL K+ R+ D +
Sbjct: 505 KPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSE---------SIQQDLATYNKIIKQHCLMQRVEK 58
+ T++ +R M+ ++C+ R++E + + +LA +N ++K + ++ +K
Sbjct: 888 YLPTIRLYRMMIE--LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
V + + + E GL PD +Y +I +C +R P + Y +M G+ P TY SLI
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 119 ALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
A ++ L +A LF+E+LS D + T+M G SKA + M + G+
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI-- 1063
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P L T + ++ G +EA +L + + + + Y VI + ++++
Sbjct: 1064 ------EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 236 LRKAYELKVEMDRK 249
E +EM ++
Sbjct: 1118 YNSGIERLLEMKKE 1131
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 154/368 (41%), Gaps = 55/368 (14%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR- 89
R ++ + YN ++ + + K ++ M ++G PD +S+ +I +
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG 275
Query: 90 -CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
P A E + G+ PDA TY++L+ A L A +F++M + PD T+
Sbjct: 276 LTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTY 335
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
++ G ++A + ++ KG PD VT
Sbjct: 336 NAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM-GLSPDAVSYIIVISGFCQNRELR 237
GF TYN IIH G+++ AL + + M + G +PDA++Y ++I +
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+A L EM LD V +Q TY++LI Y G+ + M
Sbjct: 456 EAAALMSEM-------LD-VGIKPTLQ------TYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI-----ENC 352
G+ PD++ S++++ L + T+ +I+D P+Y +Y+ +I EN
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD---GHTPSYTLYELMILGLMKENR 558
Query: 353 SNNEFKSV 360
S++ K++
Sbjct: 559 SDDIQKTI 566
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 172/449 (38%), Gaps = 86/449 (19%)
Query: 43 YNKIIK---QHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
Y II+ + L Q+ E VG LR + G +PD ++ +++ + C +A
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLR---QSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMHACCLEG 156
M + G P + + L+ ALC RL E Y + +E+ I+ ++ ++ A G
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Query: 157 EFSKAFHMHHQMIHKGVLPDF---------------------------VTGFSPALFTYN 189
+ ++ M G LP F L +N
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+++ + ++ + + + + E GL PD +Y +I +C++R + Y L +M R
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM-RN 990
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG-SLPDSVIDS 308
+ GLD DTY SLI+A+ Q L + L +E+ KG L S +
Sbjct: 991 L--GLDPKL-----------DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHT 1037
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFS 368
++ D + D+KA LL + M N I TL ++ L+ S+S
Sbjct: 1038 MMKISRDSGS---DSKAEKLLQM-------MKNAGIEPTL---------ATMHLLMVSYS 1078
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG------ 422
G EA + + + + Y+ +I + R + + +EM + G
Sbjct: 1079 SSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHR 1138
Query: 423 ----------FVSHMFSVLALLTALRDHG 441
F V+ LL AL D G
Sbjct: 1139 IWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 26/287 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + TYN +I +C ++E ++ M E + P+ ++ ++ G C +
Sbjct: 400 ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A F ++M+++G+ + TY +LI A CS + +A + +++ML PD + L+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C A + ++ GFS L YN +I C E+ +L
Sbjct: 520 GLCQVRRDHDAIRVVEKLKE--------GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + G PD+++Y +IS F ++++ + +M GLD
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED---GLDPTV-----------T 617
Query: 271 TYASLINAYCAQGELFKVLTLDDEMS-HKGSLPDSVIDSLLINGLDK 316
TY ++I+AYC+ GEL + L L +M H P++VI ++LIN K
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 153/410 (37%), Gaps = 87/410 (21%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
++ RF+ S + + + I C R IL + + +A + +
Sbjct: 245 ALISRFS----SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNAL 300
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----- 136
++ N + + L+MD+ I PD T LI LC RR+ EA +F++M
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRT 360
Query: 137 ----LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
+ D I F TL+ C G +A + +M +P TYN +I
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-------KLEERCAPNAVTYNCLI 413
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
G C G++E A ++ M E + P+ V+ ++ G C++ L A ++M+++ V
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 253 GLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
G + TY +LI+A C+ + K + ++M G PD+ I LI+
Sbjct: 474 G--------------NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
GL + R D
Sbjct: 520 GLCQVRRDHD-------------------------------------------------- 529
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
A R + + EG + D YN+LI C + N K Y M +M + G
Sbjct: 530 ---AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 125/322 (38%), Gaps = 48/322 (14%)
Query: 126 LSEAYHLFQEMLS-----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+ +A+ + EML PP+ IT ++H E K + + I + G
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLH------EVWKGRLLTEEKIIALISRFSSHG 254
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
SP I LC R A IL + + +A + ++S +N ++ +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+L ++MD ++ D T LIN C + + L + ++M K +
Sbjct: 315 DLVLKMDE--------------VKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRT 360
Query: 301 LPDSVI--DSL----LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN 354
+VI DS+ LI+GL K R K+ A LL+ PN + Y NC
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKE--AEELLVRMKLEERCAPNAVTY-----NC-- 411
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
L+ + G + A M E KP+ N ++ CR ++ A
Sbjct: 412 --------LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 415 YMEMVRYGFVSHMFSVLALLTA 436
+M+M + G ++ + + L+ A
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA 485
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 26/280 (9%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TYN +I +C ++E ++ M E + P+ ++ ++ G C + A F ++
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M+++G+ + TY +LI A CS + +A + +++ML PD + L+ C
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A + ++ GFS L YN +I C E+ +L M + G
Sbjct: 527 DHDAIRVVEKLKE--------GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD+++Y +IS F ++++ + +M GLD TY ++I+
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMRED---GLDPTV-----------TTYGAVID 624
Query: 278 AYCAQGELFKVLTLDDEMS-HKGSLPDSVIDSLLINGLDK 316
AYC+ GEL + L L +M H P++VI ++LIN K
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 128/288 (44%), Gaps = 32/288 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E ++ ++ TY +I C + VEK + M E G SPDA Y +I+G C R
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A ++ + G D Y+ LI C K + Y + +M PD IT+ TL+
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+F M QM G+ P + TY A+I C +G ++EAL + +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGL--------DPTVTTYGAVIDAYCSVGELDEALKLFK- 640
Query: 211 MPEMGL----SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+MGL +P+ V Y I+I+ F + +A LK EM K+V E TY L + L
Sbjct: 641 --DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE-TYNALFKCL 697
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+++ QGE +L L DEM + P+ + +L+ L
Sbjct: 698 NEK-----------TQGE--TLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 157/411 (38%), Gaps = 89/411 (21%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
++ RF+ S + + + I C R IL + + +A + +
Sbjct: 245 ALISRFS----SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----- 136
++ N + + L+MD+ I PD T LI LC RR+ EA +F++M
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 137 ----LSPPDDITFTTLMHACCLEGEFSKAFHMHHQM-IHKGVLPDFVTGFSPALFTYNAI 191
+ D I F TL+ C G +A + +M + + +P+ VT YN +
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT--------YNCL 412
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I G C G++E A ++ M E + P+ V+ ++ G C++ L A ++M+++ V
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
G + TY +LI+A C+ + K + ++M G PD+ I LI
Sbjct: 473 KG--------------NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+GL + R D
Sbjct: 519 SGLCQVRRDHD------------------------------------------------- 529
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
A R + + EG + D YN+LI C + N K Y M +M + G
Sbjct: 530 ----AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 17/243 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y +I C ++R + ++ + E G S D L+Y +I FC+ K YE
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMHACCLE 155
+M+++G PD+ TY++LI + + ++M D T TT ++ A C
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 156 GEFSKAFHMHHQM-IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
GE +A + M +H V P+ V YN +I+ LG +AL + M
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTV--------IYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD--EVTYAYLMQGLSDEDTY 272
+ P+ +Y + C N + + LK+ MD V + ++T LM+ LS D
Sbjct: 682 MVRPNVETYNALFK--CLNEKTQGETLLKL-MDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 273 ASL 275
L
Sbjct: 739 VKL 741
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 50/323 (15%)
Query: 126 LSEAYHLFQEMLS-----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT- 179
+ +A+ + EML PP+ IT ++H + + ++I ++ F +
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEV-----WKERLLTEEKII--ALISRFSSH 253
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G SP I LC R A IL + + +A + ++S +N ++ +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+L ++MD ++ D T LIN C + + L + ++M K
Sbjct: 314 NDLVLKMDE--------------VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 300 SLPDSVI--DSL----LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCS 353
+ +VI DS+ LI+GL K R K+ A LL+ +PN + Y NC
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKE--AEELLVRMKLEERCVPNAVTY-----NC- 411
Query: 354 NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
L+ + G + A M E KP+ N ++ CR ++ A
Sbjct: 412 ---------LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 414 MYMEMVRYGFVSHMFSVLALLTA 436
+M+M + G ++ + + L+ A
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHA 485
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 175/436 (40%), Gaps = 46/436 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+++A + ++ + RN R +Q Y ++ + + +VEK + + M
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G SP +Y +I G +AY F +M + G+ PD ++L+ L R+
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 127 SEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
E ++F EM P +++ T++ A SKA + D V SP
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFE----SKAHVSEVSSWFDKMKADSV---SP 407
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ FTY+ +I G C RVE+AL +L M E G P +Y +I+ + + A EL
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
E+ G YA +I + G+L + + L +EM ++GS PD
Sbjct: 468 KELKENF--------------GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGL 363
+ L++G+ K + + L + EN + S +
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLL------------------RKMEENGCRADINSHNII 555
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI--FDHCRRLNVHKAYNMYMEMVRY 421
+ F+ G+ A +T+ KPDG YN L+ F H +A M EM
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF--EEAARMMREMKDK 613
Query: 422 GFVSHMFSVLALLTAL 437
GF + ++L A+
Sbjct: 614 GFEYDAITYSSILDAV 629
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 159/413 (38%), Gaps = 62/413 (15%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
A ++++K + V K + + + P + +Y VI K +E E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 101 MDQKG-ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
M +G PD TYS+LI + R A LF EM P + +TTL+ G
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ KA + +M G SP ++TY +I GL GRV+EA G + M GL
Sbjct: 283 KVEKALDLFEEMKRAGC--------SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 217 SPDAV--SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE--VTYAYLMQGL------ 266
+PD V + ++ I G ++ + EL +W V+Y +++ L
Sbjct: 335 TPDVVFLNNLMNILG-----KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 267 -----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
E TY+ LI+ YC + K L L +EM KG P
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
LIN L K R + ++ L EN N + ++K F
Sbjct: 450 LINALGKAKRYEAANE------------------LFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
G ++EA + M PD YN L+ + +++A ++ +M G
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 135/329 (41%), Gaps = 45/329 (13%)
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
S L++AL + +S+A +F + P T+ +++ EG+ K ++ +M +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 171 KG-VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+G PD +T Y+A+I LGR + A+ + M + + P Y ++
Sbjct: 226 EGDCFPDTIT--------YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
+ + ++ KA +L EM R G Y TY LI G + +
Sbjct: 278 YFKVGKVEKALDLFEEMKRA---GCSPTVY-----------TYTELIKGLGKAGRVDEAY 323
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY-MYTSMPNYIIYDTL 348
+M G PD V + L+N L K R ++ L + ++ M+ P + Y+T+
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE----LTNVFSEMGMWRCTPTVVSYNTV 379
Query: 349 IENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
I+ F + V+E + D M + P Y++LI +C+ V
Sbjct: 380 IKAL--------------FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 409 HKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
KA + EM GF + +L+ AL
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINAL 454
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 141/306 (46%), Gaps = 34/306 (11%)
Query: 23 VVCRFTAARNSESIQQDLA---------TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP 73
+VCR+ + + + +D+A TYN ++ +C +E+ +++ + GL
Sbjct: 253 LVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL 312
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
+ ++Y ++ C++ + E M Q P TY+ LI LC R LS A F
Sbjct: 313 NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 372
Query: 134 QEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNA 190
+ML PD +T+ T++ A EG A + G+L + T P L TYN+
Sbjct: 373 YQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL------LGLLKN--TCCPPGLITYNS 424
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
+I GL G +++AL + M + G+ PD ++ +I GFC+ + +A ++ E +
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR- 483
Query: 251 VWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
G+ TY ++QGL C + E+ + + + M G PD I + +
Sbjct: 484 GNGIRGSTYRLVIQGL-------------CKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 311 INGLDK 316
+ G+++
Sbjct: 531 VKGVEE 536
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 169/414 (40%), Gaps = 51/414 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TYN II C + + +L M+ G PD ++Y VI + +A F
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFW 232
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+ Q G P TY+ L++ +C + A + ++M PD +T+ +L++ C
Sbjct: 233 KDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRR 292
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC---FLGRVEEALGILRGMP 212
G + + ++ G+ + VT YN ++H LC + VEE L I M
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVT--------YNTLLHSLCSHEYWDEVEEILNI---MY 341
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ P ++Y I+I+G C+ R L +A + +M + + L D TY
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ--------------KCLPDIVTY 387
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+++ A +G + + L + + P + + +I+GL KK K A
Sbjct: 388 NTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK---------A 438
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA-HDTMLEGNYKPD 391
+Y M + I+ I S L+ F LV EA + +T GN
Sbjct: 439 LELYHQMLDAGIFPDDITRRS---------LIYGFCRANLVEEAGQVLKETSNRGN-GIR 488
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
G+ Y L+I C++ + A + M+ G A++ + + GM +E
Sbjct: 489 GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSE 542
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 164/427 (38%), Gaps = 62/427 (14%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
+F + + + D T N+I+ C ++ ++ MA P S ++ G
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDD 142
KA M G +PD TY+ +I LC K + A L ++M SPPD
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDV 209
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT----------------------- 179
IT+ T++ G +A + G P +T
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 180 ----GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
G P + TYN++++ C G +EE +++ + GL + V+Y ++ C +
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE- 328
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
Y +VE +++ + +Y + TY LIN C L + + +M
Sbjct: 329 ----YWDEVEEILNIMY---QTSYCPTVI------TYNILINGLCKARLLSRAIDFFYQM 375
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN 355
+ LPD V + ++ + K+ D LL ++ + P I Y+++I+
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEGMVDDA-IELLGLLKN--TCCPPGLITYNSVID----- 427
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
GL K +GL+ +A + ML+ PD LI+ CR V +A +
Sbjct: 428 ------GLAK----KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477
Query: 416 MEMVRYG 422
E G
Sbjct: 478 KETSNRG 484
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 45/354 (12%)
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
+F L D D T + ++ LCS +L++A L + M P + + L+
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
+ KA + M+ G +PD +T YN II LC G + AL +L M
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTIT--------YNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYEL-KVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G PD ++Y VI +A K ++ + +TY L++
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFM--ITYTVLVE------- 252
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
L+ YC +VL ++M+ +G PD V + L+N ++ ++ + + I+
Sbjct: 253 ---LVCRYCGSARAIEVL---EDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL 306
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
+ + N + Y+TL+ + ++E+ +E + M + +Y P
Sbjct: 307 SHGLEL---NTVTYNTLLHSLCSHEYW---------------DEVEEILNIMYQTSYCPT 348
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI C+ + +A + + +M+ + + + +L A+ GM ++
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 41/267 (15%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC---NNRCPGKAYEFKLEMD 102
+I+ C V +G +L+ ++GL P Y +I+GFC N C + + +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
P + Y +I+ LC ++ EAY +F+ + PD + +TT++ C +G
Sbjct: 279 H---FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 160 KAFHMHHQMIHKGVLPD---------------------------FVTGFSPALFTYNAII 192
A + +MI KG+ P+ G+ + + N +I
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
G C G+ +EA I + M E G++P+A++Y +I GFC+ ++ K +L E+
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK---AL 452
Query: 253 GLDE--VTYAYLMQGLSDEDTYASLIN 277
GL + YA L++ L D+ A+ +N
Sbjct: 453 GLKPSGMAYAALVRNLKMSDSVATSLN 479
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y KIIK C+ ++ + I + + +KG +PD + Y +I GFC G A + EM
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITF---TTLMHACCLEGEFS 159
+KG+ P+ F Y+ +I + +S + EML T T++ C G+
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+AF + M GV P+ + TYNA+I G C +VE+ L + + + +GL P
Sbjct: 406 EAFEIFKNMSETGVTPNAI--------TYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 220 AVSYIIVI 227
++Y ++
Sbjct: 458 GMAYAALV 465
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 126/335 (37%), Gaps = 41/335 (12%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-SPPDDITFTTLMHACCLEGEFSKAFH 163
GI T +S++ R+L + L +EM+ S D L+ A C G+ S+ +
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYE 234
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ Q + +G+ P + Y +I G C +G +L M P Y
Sbjct: 235 LLKQGLKQGL--------DPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG 283
+I G C N++ +AY + L + YA D Y ++I +C +G
Sbjct: 287 QKIIKGLCMNKKQLEAY--------CIFKNLKDKGYA------PDRVVYTTMIRGFCEKG 332
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI 343
L L EM KG P+ +++I+G K+ +A
Sbjct: 333 WLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEA------------------ 374
Query: 344 IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
Y+ ++ N S ++K F G +EA M E P+ YN LI C
Sbjct: 375 FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Query: 404 RRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
+ V K +Y E+ G + AL+ L+
Sbjct: 435 KENKVEKGLKLYKELKALGLKPSGMAYAALVRNLK 469
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 39/295 (13%)
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
TGF P + L G VEEA+ + + +MG+S V+ V+ G + R+L
Sbjct: 138 TTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLD 197
Query: 238 KAYELKVEMD-------------RKVVWGLD-EVTYAYLMQGLSD-----EDTYASLINA 278
+ +EL EM R + G D Y L QGL + YA LI+
Sbjct: 198 RFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI-IADYMYT 337
+C G + + M P I +I GL K +A+ + + D Y
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC--MNKKQLEAYCIFKNLKDKGYA 315
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ ++Y T+I + F +G + A + M++ +P+ YN+
Sbjct: 316 --PDRVVYTTMI---------------RGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
+I H +R + Y EM+R G+ M S ++ HG +E + +N
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 181/421 (42%), Gaps = 58/421 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA- 94
I+ D+ + I + C +++ +L + G+S D++S VI GFC P +A
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 95 ---YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+ F+L P+ F YSS + +CS + A +FQE+ PD + +TT+
Sbjct: 362 KLIHSFRLR-------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF-LGRVEEALGI 207
+ C G KAF ++ G +P T + I+ G C G + +A +
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSG---------NPPSLTTSTILIGACSRFGSISDAESV 465
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
R M GL D V+Y ++ G+ + +L K +EL +DE+ A G+S
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL-----------IDEMRSA----GIS 510
Query: 268 -DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
D TY LI++ +G + + + E+ +G +P ++ + +I G K+ ++
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFI- 569
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L +AD P+ + L+ G K+ M +A + +L+
Sbjct: 570 LWFYMADLRMK--PDVVTCSALLH-----------GYCKAQRM----EKAIVLFNKLLDA 612
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNER 446
KPD +YN LI +C ++ KA + MV+ G + + + AL+ L N
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSE 672
Query: 447 S 447
+
Sbjct: 673 T 673
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 42/338 (12%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S ++ ++ Y+ + C + + I + + E GL PD + Y +I G+CN
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSK-RRLSEAYHLFQEMLSPP---DDITFTT 147
KA+++ + + G P + T S+++ CS+ +S+A +F+ M + D +T+
Sbjct: 425 DKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNN 483
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
LMH + +K F + +M G+ PD TYN +IH + G ++EA I
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVA--------TYNILIHSMVVRGYIDEANEI 535
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGL 266
+ + G P +++ VI GF + + ++A+ L M D ++ D VT + L+ G
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM--KPDVVTCSALLHGY 593
Query: 267 ----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
D Y +LI+ YC+ G++ K L M +G LP+
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 305 VIDSLLINGLD-KKARTKDTKAHLLL---IIADYMYTS 338
L+ GL+ K+ +T A +LL I+A + TS
Sbjct: 654 STHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTS 691
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 153/375 (40%), Gaps = 51/375 (13%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTL---MH 150
A + ++DQ GI P SL++ + L A + MLS + L +
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +G F K + + M H G+ PD V + I LC G ++EA +L
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIV--------AFTVFIDKLCKAGFLKEATSVLFK 331
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G+S D+VS VI GFC+ + +A +L +++ ++ +
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---------------IHSFRLR--PNIF 374
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
Y+S ++ C+ G++ + T+ E+ G LPD V + +I+G RT + +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 331 IADYMYTSMPNYIIYDTLIENCSN----NEFKSVVGLVKSFSMR-------GLVNEAARA 379
+ + P+ LI CS ++ +SV +K+ ++ L++ +
Sbjct: 435 LKS---GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 380 H---------DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
H D M PD A YN+LI R + +A + E++R GFV +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 431 LALLTALRDHGMYNE 445
++ G + E
Sbjct: 552 TDVIGGFSKRGDFQE 566
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 181/421 (42%), Gaps = 58/421 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA- 94
I+ D+ + I + C +++ +L + G+S D++S VI GFC P +A
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 95 ---YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+ F+L P+ F YSS + +CS + A +FQE+ PD + +TT+
Sbjct: 362 KLIHSFRLR-------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF-LGRVEEALGI 207
+ C G KAF ++ G +P T + I+ G C G + +A +
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSG---------NPPSLTTSTILIGACSRFGSISDAESV 465
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
R M GL D V+Y ++ G+ + +L K +EL +DE+ A G+S
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL-----------IDEMRSA----GIS 510
Query: 268 -DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
D TY LI++ +G + + + E+ +G +P ++ + +I G K+ ++
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFI- 569
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L +AD P+ + L+ G K+ M +A + +L+
Sbjct: 570 LWFYMADLRMK--PDVVTCSALLH-----------GYCKAQRM----EKAIVLFNKLLDA 612
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNER 446
KPD +YN LI +C ++ KA + MV+ G + + + AL+ L N
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSE 672
Query: 447 S 447
+
Sbjct: 673 T 673
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 42/338 (12%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S ++ ++ Y+ + C + + I + + E GL PD + Y +I G+CN
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSK-RRLSEAYHLFQEMLSPP---DDITFTT 147
KA+++ + + G P + T S+++ CS+ +S+A +F+ M + D +T+
Sbjct: 425 DKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNN 483
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
LMH + +K F + +M G+ PD TYN +IH + G ++EA I
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVA--------TYNILIHSMVVRGYIDEANEI 535
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGL 266
+ + G P +++ VI GF + + ++A+ L M D ++ D VT + L+ G
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM--KPDVVTCSALLHGY 593
Query: 267 ----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
D Y +LI+ YC+ G++ K L M +G LP+
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 305 VIDSLLINGLD-KKARTKDTKAHLLL---IIADYMYTS 338
L+ GL+ K+ +T A +LL I+A + TS
Sbjct: 654 STHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTS 691
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 153/375 (40%), Gaps = 51/375 (13%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTL---MH 150
A + ++DQ GI P SL++ + L A + MLS + L +
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +G F K + + M H G+ PD V + I LC G ++EA +L
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIV--------AFTVFIDKLCKAGFLKEATSVLFK 331
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G+S D+VS VI GFC+ + +A +L +++ ++ +
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---------------IHSFRLR--PNIF 374
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
Y+S ++ C+ G++ + T+ E+ G LPD V + +I+G RT + +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 331 IADYMYTSMPNYIIYDTLIENCSN----NEFKSVVGLVKSFSMR-------GLVNEAARA 379
+ + P+ LI CS ++ +SV +K+ ++ L++ +
Sbjct: 435 LKS---GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 380 H---------DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
H D M PD A YN+LI R + +A + E++R GFV +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 431 LALLTALRDHGMYNE 445
++ G + E
Sbjct: 552 TDVIGGFSKRGDFQE 566
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 185/440 (42%), Gaps = 71/440 (16%)
Query: 12 LKTFRHMVRNGV-------------VCRFTAARNSESIQQDLA---------TYNKIIKQ 49
L+ FR MV +GV +CR S+ + ++ + TYN II
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 50 HCLMQRVEKGV-GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILP 108
+ + QR GV G+L+ M + G+ + ++Y ++ N A + EM ++GI
Sbjct: 269 Y-VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMH 165
D Y+SLI C K + A+ LF E+ P T+ L+ C GE A +
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
++M KGV + +N +I G C G V+EA I M + G D +
Sbjct: 388 NEMQSKGV--------NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGEL 285
+ S C NR L++ E K + R + G+ T +Y +LI+ YC +G +
Sbjct: 440 IAS--CFNR-LKRYDEAKQWLFRMMEGGVKLSTV-----------SYTNLIDVYCKEGNV 485
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
+ L EMS KG P+++ +++I K+ + K+ + + A+ M P+ Y
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMD---PDSYTY 542
Query: 346 DTLI--ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
+LI E ++N V+EA R M + Y ++I
Sbjct: 543 TSLIHGECIADN-----------------VDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585
Query: 404 RRLNVHKAYNMYMEMVRYGF 423
+ +A+ +Y EM R G+
Sbjct: 586 KAGKSDEAFGLYDEMKRKGY 605
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 43/384 (11%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
+R++ + I R M + G+ S V+ G C K+ + E KGI P+A+TY
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTY 262
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
+++I A +R S + + M + +T+T LM G+ S A + +M
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+G+ D + Y ++I C G ++ A + + E GLSP + +Y +I G
Sbjct: 323 RGIESD--------VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLT 290
C+ E+ A L EM K V + +V + +LI+ YC +G + +
Sbjct: 375 CKVGEMGAAEILMNEMQSKGV-NITQV-------------VFNTLIDGYCRKGMVDEASM 420
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
+ D M KG D + + + ++ R + K L ++ + S +Y
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY-------- 472
Query: 351 NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK 410
L+ + G V EA R M +P+ YN++I+ +C++ + +
Sbjct: 473 ----------TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 411 AYNMYMEMVRYGFVSHMFSVLALL 434
A + M G ++ +L+
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLI 546
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 12/242 (4%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + +N +I +C V++ I M +KG D + + + F +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A ++ M + G+ +Y++LI C + + EA LF EM S P+ IT+ ++
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+A C +G+ +A + M G+ PD +TY ++IHG C V+EA+ +
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDS--------YTYTSLIHGECIADNVDEAMRLFS 563
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M GL ++V+Y ++ISG + + +A+ L EM RK + +D Y L+ +
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK-GYTIDNKVYTALIGSMHSP 622
Query: 270 DT 271
+T
Sbjct: 623 ET 624
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 195/450 (43%), Gaps = 60/450 (13%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
+++ T+N +I C ++ + + + M + G+ P+ +S+ +I G C F
Sbjct: 216 ENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT----GDMRF 271
Query: 98 KLE-------MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTT 147
L+ M + P+A TY+S+I C RL A + +M+ D T+
Sbjct: 272 ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
L+ A G +A + +M KG++ + V YN+I++ L G +E A+ +
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI--------YNSIVYWLFMEGDIEGAMSV 383
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGL------------ 254
LR M + D + IV+ G C+N +++A E + ++ ++K+V +
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 255 -------DEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
D++ + L+QGLS D ++ +LI+ Y +G+L + L + D M + VI
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 307 DSLLINGLDKKARTKDTKAHL-LLIIADYM-YTSMPNYII-------YDTLIENCSNNEF 357
+ ++NGL K+ +A + + I D + Y ++ N + D ++ +
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDG 563
Query: 358 KSVVGLVKSFSMR-------GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK 410
+ V LV +F++ G +A M+E PD Y LI + + K
Sbjct: 564 EKSVSLV-TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEK 622
Query: 411 AYNMYMEMVRYGFVSHMFSVLALLTALRDH 440
++ ++ G H L+++ L D
Sbjct: 623 VVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 6 DSFTATLKTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
D FT + R + RNG V F + + + +D+ +N ++ +++ I
Sbjct: 395 DRFTQAI-VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQI 453
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
L M +GLS DA+S+ +I G+ +A E M + + Y+S++ L S
Sbjct: 454 LGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL-S 512
Query: 123 KRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
KR ++ A + D +T+ TL++ G +A + +M + S
Sbjct: 513 KRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEK------S 566
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+L T+N +I+ LC G E+A +L+ M E G+ PD+++Y +I+ F ++R K EL
Sbjct: 567 VSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 28/310 (9%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R S+ + + YN I+ + +E + +LR M K + D + V+ G
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DD 142
C N +A EF+ ++ +K ++ D +++L+ ++L+ A + ML D
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
I+F TL+ EG+ +A ++ MI + V YN+I++GL G
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV--------IYNSIVNGLSKRGMAG 518
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
A ++ M D V+Y +++ + + +A ++ +M ++ G V+
Sbjct: 519 AAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD--GEKSVSLV-- 570
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK-KARTK 321
T+ +IN C G K + M +G +PDS+ LI K +++ K
Sbjct: 571 --------TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEK 622
Query: 322 DTKAHLLLII 331
+ H LI+
Sbjct: 623 VVELHDYLIL 632
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 162/413 (39%), Gaps = 90/413 (21%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ + TYN +I C R++ I M + G+ + +Y ++ + +A
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLE 155
EM KG++ + Y+S++ Y LF +E
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIV------------YWLF--------------------ME 374
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ A + M K + D F+ A+ ++ GLC G V+EA+ R + E
Sbjct: 375 GDIEGAMSVLRDMNSKNMQID---RFTQAI-----VVRGLCRNGYVKEAVEFQRQISEKK 426
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDEDTYA 273
L D V + ++ F ++++L A ++ M +V GL D +++ L+ G
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQILGSM---LVQGLSLDAISFGTLIDG-------- 475
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
Y +G+L + L + D M + VI + ++NGL K+ +A + +
Sbjct: 476 -----YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA-----VVN 525
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG- 392
M + + + Y+TL+ N K+ G V EA D +L K DG
Sbjct: 526 AM--EIKDIVTYNTLL----NESLKT-----------GNVEEA----DDILSKMQKQDGE 564
Query: 393 -----AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDH 440
+N++I C+ + KA + MV G V + L+T+ H
Sbjct: 565 KSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH 617
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 53/232 (22%)
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG------VLPDFVT 179
LS +Q S PD F +L+ AC G+ A+ + Q +G L +F+
Sbjct: 134 LSGLIRSYQACGSSPD--VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMG 191
Query: 180 ---------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
G+ + T+N +I+ C ++ EAL + M + G+ P
Sbjct: 192 CLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWP 251
Query: 219 DAVSYIIVISGFCQNRELRKAYEL--KVEMDRKVVWGLDEVTYAYLMQGL---------- 266
+ VS+ ++I G C+ ++R A +L K+ M + VTY ++ G
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 267 ------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+E TY +L++AY G + L L DEM+ KG + ++VI
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI 363
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 158/406 (38%), Gaps = 83/406 (20%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
ES+ + A Y +I C +R I+ M KGL P SY +I G C + +
Sbjct: 302 ESVNVEFA-YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-------------- 139
AY+ E + P +TY L+++LC + +A ++ + ML
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 140 ------------------------PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
PD+ T T+++ C G A VL
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMK---------VLD 471
Query: 176 DFVTG--FSPALFTYNAIIHGLCFLGRVEEALGIL-RGMPEMGLSPDAVSYIIVISGFCQ 232
D +TG +P T N ++ GL GR EEAL +L R MPE + P V+Y VI G +
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
+ +A + ++++ V +D TYA +I+ C ++
Sbjct: 532 LHKGDEAMSVFGQLEKASV--------------TADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC 352
D++ D+ + + + GL + D H L +AD ++PN + Y+T+I C
Sbjct: 578 DDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA-CHFLYDLAD--SGAIPNVVCYNTVIAEC 634
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
S + GL EA + + M + PD + +L
Sbjct: 635 SRS---------------GLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 197/509 (38%), Gaps = 79/509 (15%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
L YN+++ Q C + RV ++ M +G PD +++ +I G+C R A++
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT--------FTTLMHA 151
EM GI P++ T S LI R + L +E+ + T F L+ +
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDS 281
Query: 152 CCLEGEFSKAFHMHHQM-IHKGVLPDFV--------------------------TGFSPA 184
C EG F+ F + M + + V +F G P
Sbjct: 282 MCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPR 341
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL-- 242
+YNAIIHGLC G A +L E P +Y +++ C+ + KA +
Sbjct: 342 RTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
Query: 243 ----KVEMDRKVVWG--------LDEVT-----YAYLMQG--LSDEDTYASLINAYCAQG 283
K DR ++ +D T ++QG DE T ++IN C G
Sbjct: 402 LMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMG 461
Query: 284 ELFKVL-TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
+ + LDD M+ K PD+V + ++ GL + R ++ L ++ + P
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK--PGV 519
Query: 343 IIYDTLIENC----SNNEFKSVVG----------------LVKSFSMRGLVNEAARAHDT 382
+ Y+ +I +E SV G ++ + V+ A + D
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
++ + + D VY + C+ + A + ++ G + ++ ++ G+
Sbjct: 580 VIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGL 639
Query: 443 YNERSWVIQNTLRSCNLNDSELHKVLNEI 471
E +++ ++ D+ ++L+++
Sbjct: 640 KREAYQILEEMRKNGQAPDAVTWRILDKL 668
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 46/373 (12%)
Query: 74 DALSYRYVITGFCN-NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
D +R I C R P +A + +G PD+ SS+I +LC R EA+
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
F L+ PD+ T ++ +S++ +IH+ L F F P+L YN
Sbjct: 113 FLLFLASGFIPDERTCNVIIARLL----YSRSPVSTLGVIHR--LIGFKKEFVPSLTNYN 166
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+++ LC + RV +A ++ M G PD V++ +I G+C+ REL A+++ EM
Sbjct: 167 RLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMR-- 224
Query: 250 VVWGL--DEVTYAYLMQG---LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
V G+ + +T + L+ G + D +T L+ EL++ + + + S K + +
Sbjct: 225 -VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK------ELWEYMKNETDTSMKAAAFAN 277
Query: 305 VIDSLLING-LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGL 363
++DS+ G + + + + ++ Y M D+L N+ +V +
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHM-----IDSLCRYRRNHGAARIVYI 332
Query: 364 VKSFSMR-----------GLVNEAA--RAHDTMLEGN---YKPDGAVYNLLIFDHCRRLN 407
+KS ++ GL + RA+ + EG+ + P Y LL+ C+ L+
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 408 VHKAYNMYMEMVR 420
KA N+ M+R
Sbjct: 393 TGKARNVLELMLR 405
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 166/441 (37%), Gaps = 67/441 (15%)
Query: 39 DLATYNKIIKQHCLMQR-VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
D A + + I C ++R ++ + IL G+ +G PD+L+ VI C+ +A+
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-----PPDDITFTTLMHAC 152
L G +PD T + +I L R + ++ P + LM+
Sbjct: 113 FLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQL 172
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C A + M ++G LPD VT + +I G C + +E A + M
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVT--------FTTLIGGYCEIRELEVAHKVFDEMR 224
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVE----MDRKVVWGLDEVTYAYLMQGLSD 268
G+ P++++ ++I GF + R++ +L E M + + +A L+ +
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 269 ED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
E Y +I++ C + M KG P
Sbjct: 285 EGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTS 344
Query: 307 DSLLINGLDKKA------RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSV 360
+ +I+GL K + + + ++Y Y ++ ++L + + ++V
Sbjct: 345 YNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYK-----LLMESLCKELDTGKARNV 399
Query: 361 VGL-----------VKSFSMRGLV-----NEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+ L + + +RGL E +ML+G+ +PD N +I C+
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 405 RLNVHKAYNMYMEMVRYGFVS 425
V A + +M+ F +
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCA 480
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 37/303 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q ++ +N ++ C V++G +LR M + + PDA ++ + G+C R P KA +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML------SPPDDITFTTLMH 150
EM + G P+ FTY + I C + EA LF M+ S P TF ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A + + F + +MI G LPD + TY +I G+C +V+EA L
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPD--------VSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR--------------KVVWGLDE 256
M G PD V+Y + C+NR+ +A +L M + + +D+
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
Query: 257 VTYAY-------LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG-SLPDSVIDS 308
A+ + D +TY ++IN + L +E+ +KG LP V DS
Sbjct: 462 PDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDS 521
Query: 309 LLI 311
L+
Sbjct: 522 FLM 524
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P + +N ++ LC G V+E +LR M + PDA ++ ++ G+C+ R+ +KA +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDED-TYASLINAYCAQGELFKVLTLDDEMSHKGS 300
L EM + G E+ TY + I+ +C G + + L D M KGS
Sbjct: 290 LLEEM---------------IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 301 L---PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLIENCSNNE 356
P + +L+I L K D +I + T +P+ Y +IE
Sbjct: 335 AVSAPTAKTFALMIVALAKN----DKAEECFELIGRMISTGCLPDVSTYKDVIE------ 384
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
M V+EA + D M Y PD YN + C +A +Y
Sbjct: 385 ---------GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 417 EMV 419
MV
Sbjct: 436 RMV 438
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAF 162
+ PDA T++ L C R +A L +EM+ P++ T+ + C G +A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ MI KG +P T+ +I L + EE ++ M G PD +
Sbjct: 324 DLFDFMITKGSAVS-----APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-----SDE--DTYASL 275
Y VI G C ++ +AY+ EM K + D VTY ++ L +DE Y +
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNK-GYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 276 INAYCAQG-ELFKVLT-----LDD---------EMSHKGSLPDSVIDSLLINGLDKKART 320
+ + CA + + +L +DD EM + + D +INGL R
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 321 KD 322
K+
Sbjct: 498 KE 499
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 171/407 (42%), Gaps = 56/407 (13%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M G+ P+ ++ + FCN+ + +F +M+++G PD TY++L+ + C + R
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L EA++L++ M PD +T+T+L+ C +G +A H+M+ +G+ PD
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD------ 340
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+YN +I+ C G ++++ +L M + PD + +++ GF + L A
Sbjct: 341 --CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF 398
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDE-----------------------DTYASLINAY 279
VE+ R V EV +L+ L E +TY +LI +
Sbjct: 399 VVELRRLKVDIPFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
+ + L L ++ ++ + D+ LI L + R ++ ++ L+ +
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAES---LMAEMFDSEVK 514
Query: 340 PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
P+ I L+ C +F L+ F+M + + P+ YN L
Sbjct: 515 PDSFICGALVYGYCKELDFDKAERLLSLFAMEFRI--------------FDPES--YNSL 558
Query: 399 IFDHCRR-LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYN 444
+ C KA + M R GFV + + L+ L + N
Sbjct: 559 VKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLPN 605
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 37/309 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN-RCPGKA 94
I + T+N + C + L M E+G PD ++Y +++ +C R
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
Y +K+ M ++ ++PD TY+SLI+ LC R+ EA+ F M+ PD +++ TL++A
Sbjct: 292 YLYKI-MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C EG ++ + H+M+ V+PD FT I+ G GR+ A+ + +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPD--------RFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 212 PEMGLS-PDAVSYIIVISGFCQNREL------------RKAYELKVEMDRKVVWGL---D 255
+ + P V +++S CQ + + +E K E ++ L D
Sbjct: 403 RRLKVDIPFEVCDFLIVS-LCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 256 EVTYAYLMQG-------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+ A +++G + D TY +LI C G + +L EM PDS I
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICG 521
Query: 309 LLINGLDKK 317
L+ G K+
Sbjct: 522 ALVYGYCKE 530
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 135/318 (42%), Gaps = 38/318 (11%)
Query: 106 ILPDAFTYSSLIQALCSKRRLS---EAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAF 162
IL + + +Q LC L+ E +F+ ++S D+ + ++ ++G
Sbjct: 122 ILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGL 181
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ + VL +GFS ++ T N +++GL L +E+ + M +G+ P+ +
Sbjct: 182 VEEGFRVFREVLD---SGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYT 238
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
+ I+ + FC + R+ + +M+ + G + D TY +L+++YC +
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEE---GFE-----------PDLVTYNTLVSSYCRR 284
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
G L + L M + +PD V + LI GL K R ++ ++ + P+
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI---KPDC 341
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
+ Y+TLI ++ G++ ++ + ML + PD +++
Sbjct: 342 MSYNTLI---------------YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 403 CRRLNVHKAYNMYMEMVR 420
R + A N +E+ R
Sbjct: 387 VREGRLLSAVNFVVELRR 404
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 153/372 (41%), Gaps = 63/372 (16%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN--NRCPGK 93
I D TYN +I C ++ L M + G+ PD +SY +I GFC N K
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216
Query: 94 AY-----EFKL---------------------EMDQKGILPDAFTYSSLIQALCSKRRLS 127
A E L +M G PD T+SS+I LC ++
Sbjct: 217 ALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 128 EAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
E L +EM P+ +T+TTL+ + + A ++ QM+ +G+ D V
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLV------ 330
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
Y ++ GL G + EA + + E P+ V+Y ++ G C+ +L A +
Sbjct: 331 --VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
+M K V + + TY+S+IN Y +G L + ++L +M + +P+
Sbjct: 389 QMLEKSV--------------IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 305 VIDSLLINGLDKKARTK---DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN-NEFKSV 360
+I+GL K + + + + LI + N I D L+ + K V
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE------ENNYILDALVNHLKRIGRIKEV 488
Query: 361 VGLVKSFSMRGL 372
GLVK +G+
Sbjct: 489 KGLVKDMVSKGV 500
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 165/394 (41%), Gaps = 50/394 (12%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGF-CNNRCPGKAYEFKLEMDQKGILPDAFT 112
+R+ L M G+ PD+ + +I F N + +M G+ PD F
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
+ LI + C RLS A L + + D +T+ T++ C G +A+ +M+ G
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+LPD V +YN +I G C +G A ++ + E+ L +++ I++S +
Sbjct: 192 ILPDTV--------SYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYN 239
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
+ +AY V+ G D D T++S+IN C G++ + L
Sbjct: 240 LHAIEEAYR------DMVMSGFD-----------PDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN 351
EM P+ V + L++ L K + H L + + + +P + ++Y L++
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFK----ANIYRHALALYSQMVVRGIPVDLVVYTVLMD- 337
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
GL K+ +R EA + +LE N P+ Y L+ C+ ++ A
Sbjct: 338 ----------GLFKAGDLR----EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 412 YNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ +M+ + ++ + +++ GM E
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 173/411 (42%), Gaps = 43/411 (10%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
R+++ G+++ M KG++ D ++Y +I F A + EM ++G+ D +Y+
Sbjct: 484 RIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 543
Query: 115 SLIQALCSKRRLSE--AYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LI + ++ AY +E PD TF +M++ +G+ + +M G
Sbjct: 544 VLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+ P+L + N ++ LC G++EEA+ IL M M + P+ +Y I + +
Sbjct: 604 I--------KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
++ ++ E +Y ++ LS + Y +LI C G K +
Sbjct: 656 HKR------------ADAIFKTHETLLSYGIK-LSRQ-VYNTLIATLCKLGMTKKAAMVM 701
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC 352
+M +G +PD+V + L++G + + + +++ + PN Y+T+I
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS---PNVATYNTIIRGL 758
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
S+ GL+ E + M +PD YN LI + N+ +
Sbjct: 759 SD---------------AGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 413 NMYMEMVRYGFVSHMFSVLALLTALRDHG-MYNERSWVIQNTLRSCNLNDS 462
+Y EM+ G V + L++ + G M R + + R + N S
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS 854
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I+ YN +I C + +K ++ M +G PD +++ ++ G+
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA M + GI P+ TY+++I+ L + E EM S PDD T+ L+
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
G + ++ +MI G++P TYN +I +G++ +A +L+
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLVPK--------TSTYNVLISEFANVGKMLQARELLK 842
Query: 210 GMPEMGLSPDAVSYIIVISGFCQ 232
M + G+SP+ +Y +ISG C+
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCK 865
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 31/261 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ L + N ++ C ++E+ + IL M + P+ +YR + ++ +
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ + GI Y++LI LC +A + +M + PD +TF +LMH
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPAL 185
+ KA + M+ G+ P+ T G P
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FTYNA+I G +G ++ ++ I M GL P +Y ++IS F ++ +A EL E
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Query: 246 MDRKVVWGLDEVTYAYLMQGL 266
M ++ V + TY ++ GL
Sbjct: 844 MGKRGV-SPNTSTYCTMISGL 863
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D T + ++ C RV++ +++ + EK PD +Y +++ C + Y
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 96 EFKLEM-DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
EF EM D + PD +++ LI +C+ + L EA +L ++ + PD + T+M
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C + S+A ++ +M +GV PD +T YN +I GL GRVEEA L+ M
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQIT--------YNTLIFGLSKAGRVEEARMYLKTM 326
Query: 212 PEMGLSPDAVSYIIVISGFCQ 232
+ G PD +Y +++G C+
Sbjct: 327 VDAGYEPDTATYTSLMNGMCR 347
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+L M GL PD ++ + C +A + E+ +K PD +TY+ L++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 122 SKRRLSEAYHLFQEMLS----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
+ L Y EM PD ++FT L+ C +A ++ ++ +
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN------- 258
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
GF P F YN I+ G C L + EA+G+ + M E G+ PD ++Y +I G L
Sbjct: 259 -AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG------LS 311
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG 283
KA +VE R + + + Y D TY SL+N C +G
Sbjct: 312 KAG--RVEEARMYLKTMVDAGYE------PDTATYTSLMNGMCRKG 349
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 58/306 (18%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM-HAC-CLEGEFSKAFHMH 165
++S++Q+ S +++ LFQ +L P TF L+ HAC + S +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+ M++ G+ PD VT + + LC GRV+EA +++ + E PD +Y
Sbjct: 148 NLMVNNGLEPDQVTT--------DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGEL 285
++ C+ ++L YE EM D V++ L I+ C L
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL-------------IDNVCNSKNL 246
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------ 339
+ + L ++ + G PD + + ++ G ++ + A +Y M
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE---------AVGVYKKMKEEGVE 297
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
P+ I Y+TLI GL K+ G V EA TM++ Y+PD A Y L+
Sbjct: 298 PDQITYNTLI-----------FGLSKA----GRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 400 FDHCRR 405
CR+
Sbjct: 343 NGMCRK 348
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
R+ ++ DL ++ +I C + + + + ++ + G PD Y ++ GFC
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTT 147
+A +M ++G+ PD TY++LI L R+ EA + M+ PD T+T+
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 148 LMHACCLEG 156
LM+ C +G
Sbjct: 341 LMNGMCRKG 349
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 185/464 (39%), Gaps = 79/464 (17%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I +TYN +I + + + + M + G+ PD +++ V++ + + R KA
Sbjct: 208 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 267
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM 149
+ M + PD T++ +I L + S+A LF M PD +TFT++M
Sbjct: 268 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 327
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H ++GE + M+ +G+ P+ V +YNA++ G AL +L
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIV--------SYNALMGAYAVHGMSGTALSVLG 379
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ + G+ PD VSY +++ + ++R+ KA E+ + M ++ + +
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE--------------RRKPNV 425
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV-----------------IDSLL-- 310
TY +LI+AY + G L + + + +M G P+ V +D++L
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 311 --------------------INGLD------------KKARTKDTKAHLLLIIADYMYTS 338
IN + KK D+ +LI +
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 339 MPNYIIYDTLIENCSNNEFKSVVGLVK-SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P I Y +E+ S K V V ++S +G V EA + M +PD Y
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
++ + KA +++EM G + AL+ A G
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 172/384 (44%), Gaps = 50/384 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E ++ ++ +YN ++ + + + +L + + G+ PD +SY ++ + +R PG
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA E L M ++ P+ TY++LI A S L+EA +F++M P+ ++ TL+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
AC + + +G+ + T YN+ I +E+A+ + +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGI--NLNTA------AYNSAIGSYINAAELEKAIALYQ 519
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-- 267
M + + D+V++ I+ISG C+ + +A ++Y M+ LS
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEA-----------------ISYLKEMEDLSIP 562
Query: 268 -DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
++ Y+S++ AY QG++ + ++ ++M G PD + + +++ + A K KA
Sbjct: 563 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN--ASEKWGKAC 620
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L + + N I D++ CS L+++F+ G + D M E
Sbjct: 621 ELFLEME------ANGIEPDSIA--CS--------ALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHK 410
GAV+ IF C L K
Sbjct: 665 EIPFTGAVF-FEIFSACNTLQEWK 687
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 44/327 (13%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +I+ H V++ G+ M + PDA +Y +I G+A +++ M+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH------GRAGQWRWAMN 199
Query: 103 ------QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+ I P TY++LI A S EA + ++M PD +T ++ A
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
++SKA M V PD T+N II+ L LG+ +AL + M E
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTT--------TFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 214 MGLS--PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE-D 270
PD V++ ++ Y +K E++ V A + +GL
Sbjct: 312 KRAECRPDVVTFTSIM----------HLYSVKGEIE-----NCRAVFEAMVAEGLKPNIV 356
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
+Y +L+ AY G L++ ++ G +PD V + L+N + + K L++
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEF 357
+ PN + Y+ LI+ +N F
Sbjct: 417 RKE---RRKPNVVTYNALIDAYGSNGF 440
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 150/369 (40%), Gaps = 58/369 (15%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
FK QK Y+ +I+ + +A LF EM PD T+ L++A
Sbjct: 130 FKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHG 189
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G++ A ++ M+ + +P+ TYN +I+ G EAL + + M +
Sbjct: 190 RAGQWRWAMNLMDDMLRAAI--------APSRSTYNNLINACGSSGNWREALEVCKKMTD 241
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS---DED 270
G+ PD V++ IV+S + R+ KA ++Y LM+G D
Sbjct: 242 NGVGPDLVTHNIVLSAYKSGRQYSKA-----------------LSYFELMKGAKVRPDTT 284
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGS--LPDSVIDSLLINGLDKKARTKDTKAHLL 328
T+ +I G+ + L L + M K + PD V + +++ K ++ +A
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 344
Query: 329 LIIADYMYTSMPNYIIYDTL-----IENCSNNEFKSVVGLVKS-------FSMRGLVNEA 376
++A+ + PN + Y+ L + S SV+G +K S L+N
Sbjct: 345 AMVAEGL---KPNIVSYNALMGAYAVHGMSGTAL-SVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 377 ARAHDT---------MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
R+ M + KP+ YN LI + + +A ++ +M + G ++
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Query: 428 FSVLALLTA 436
SV LL A
Sbjct: 461 VSVCTLLAA 469
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
+A S I + A YN I + +EK + + + M +K + D++++ +I+G C
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+A + EM+ I YSS++ A + +++EA +F +M PD I +
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
T+++HA ++ KA + +M G+ PD +
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 117/295 (39%), Gaps = 25/295 (8%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S+T L ++ + G E + ++ TYN +I + + + V I R M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ G+ P+ +S ++ ++ +GI + Y+S I + + L
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A L+Q M D +TFT L+ C ++ +A +M D +
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM------EDLSIPLTK 565
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ Y++++ G+V EA I M G PD ++Y ++ + + + KA EL
Sbjct: 566 EV--YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
+EM+ G++ D ++L+ A+ G+ V L D M K
Sbjct: 624 LEMEAN---GIE-----------PDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI Y+ ++ + +V + I M G PD ++Y ++ + + GKA
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY---HLFQEMLSPPDDITFTTLMHA 151
E LEM+ GI PD+ S+L++A + S + L +E P F + A
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSA 679
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C E+ +A + M LP G + N ++H G+VE + + +
Sbjct: 680 CNTLQEWKRAIDLIQMM--DPYLPSLSIGLT------NQMLHLFGKSGKVEAMMKLFYKI 731
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
G+ + +Y I++ RK E+
Sbjct: 732 IASGVGINLKTYAILLEHLLAVGNWRKYIEV 762
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 185/464 (39%), Gaps = 79/464 (17%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I +TYN +I + + + + M + G+ PD +++ V++ + + R KA
Sbjct: 76 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 135
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM 149
+ M + PD T++ +I L + S+A LF M PD +TFT++M
Sbjct: 136 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H ++GE + M+ +G+ P+ V +YNA++ G AL +L
Sbjct: 196 HLYSVKGEIENCRAVFEAMVAEGLKPNIV--------SYNALMGAYAVHGMSGTALSVLG 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ + G+ PD VSY +++ + ++R+ KA E+ + M ++ + +
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE--------------RRKPNV 293
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV-----------------IDSLL-- 310
TY +LI+AY + G L + + + +M G P+ V +D++L
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 353
Query: 311 --------------------INGLD------------KKARTKDTKAHLLLIIADYMYTS 338
IN + KK D+ +LI +
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 339 MPNYIIYDTLIENCSNNEFKSVVGLVK-SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P I Y +E+ S K V V ++S +G V EA + M +PD Y
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
++ + KA +++EM G + AL+ A G
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 172/384 (44%), Gaps = 50/384 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E ++ ++ +YN ++ + + + +L + + G+ PD +SY ++ + +R PG
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA E L M ++ P+ TY++LI A S L+EA +F++M P+ ++ TL+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
AC + + +G+ + T YN+ I +E+A+ + +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGI--NLNTA------AYNSAIGSYINAAELEKAIALYQ 387
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-- 267
M + + D+V++ I+ISG C+ + +A ++Y M+ LS
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEA-----------------ISYLKEMEDLSIP 430
Query: 268 -DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
++ Y+S++ AY QG++ + ++ ++M G PD + + +++ + A K KA
Sbjct: 431 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN--ASEKWGKAC 488
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L + + N I D++ CS L+++F+ G + D M E
Sbjct: 489 ELFLEME------ANGIEPDSIA--CS--------ALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHK 410
GAV+ IF C L K
Sbjct: 533 EIPFTGAVF-FEIFSACNTLQEWK 555
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 44/327 (13%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +I+ H V++ G+ M + PDA +Y +I G+A +++ M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH------GRAGQWRWAMN 67
Query: 103 ------QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+ I P TY++LI A S EA + ++M PD +T ++ A
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
++SKA M V PD T+N II+ L LG+ +AL + M E
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTT--------TFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 214 MGLS--PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE-D 270
PD V++ ++ Y +K E++ V A + +GL
Sbjct: 180 KRAECRPDVVTFTSIM----------HLYSVKGEIE-----NCRAVFEAMVAEGLKPNIV 224
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
+Y +L+ AY G L++ ++ G +PD V + L+N + + K L++
Sbjct: 225 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEF 357
+ PN + Y+ LI+ +N F
Sbjct: 285 RKE---RRKPNVVTYNALIDAYGSNGF 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
+A S I + A YN I + +EK + + + M +K + D++++ +I+G C
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+A + EM+ I YSS++ A + +++EA +F +M PD I +
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
T+++HA ++ KA + +M G+ PD +
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 157/386 (40%), Gaps = 59/386 (15%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
Y+ +I+ + +A LF EM PD T+ L++A G++ A ++ M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+ +P+ TYN +I+ G EAL + + M + G+ PD V++ IV+S
Sbjct: 74 RAAI--------APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA 125
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS---DEDTYASLINAYCAQGELF 286
+ R+ KA ++Y LM+G D T+ +I G+
Sbjct: 126 YKSGRQYSKA-----------------LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 287 KVLTLDDEMSHKGS--LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ L L + M K + PD V + +++ K ++ +A ++A+ + PN +
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL---KPNIVS 225
Query: 345 YDTL-----IENCSNNEFKSVVGLVKS-------FSMRGLVNEAARAHDT---------M 383
Y+ L + S SV+G +K S L+N R+ M
Sbjct: 226 YNALMGAYAVHGMSGTAL-SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL-RDHGM 442
+ KP+ YN LI + + +A ++ +M + G ++ SV LL A R
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Query: 443 YNERSWVIQNTLRSCNLNDSELHKVL 468
N + + R NLN + + +
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAYNSAI 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 117/295 (39%), Gaps = 25/295 (8%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
S+T L ++ + G E + ++ TYN +I + + + V I R M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ G+ P+ +S ++ ++ +GI + Y+S I + + L
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A L+Q M D +TFT L+ C ++ +A +M D +
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM------EDLSIPLTK 433
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ Y++++ G+V EA I M G PD ++Y ++ + + + KA EL
Sbjct: 434 EV--YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
+EM+ G++ D ++L+ A+ G+ V L D M K
Sbjct: 492 LEMEAN---GIE-----------PDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI Y+ ++ + +V + I M G PD ++Y ++ + + GKA
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY---HLFQEMLSPPDDITFTTLMHA 151
E LEM+ GI PD+ S+L++A + S + L +E P F + A
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSA 547
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C E+ +A + M LP G + N ++H G+VE + + +
Sbjct: 548 CNTLQEWKRAIDLIQMM--DPYLPSLSIGLT------NQMLHLFGKSGKVEAMMKLFYKI 599
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
G+ + +Y I++ RK E+
Sbjct: 600 IASGVGINLKTYAILLEHLLAVGNWRKYIEV 630
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 183/443 (41%), Gaps = 51/443 (11%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG---LSPDALSYRYVIT 83
F A + Y ++K M++ G++ M ++ + P+ + ++
Sbjct: 134 FVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQ 191
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--PPD 141
F + KA E EM + G PD + + L+ ALC + +A LF++M P +
Sbjct: 192 RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVN 251
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV 201
FT+L++ C G+ +A ++ QM GF P + Y ++ G G++
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMNE--------AGFEPDIVDYTNLLSGYANAGKM 303
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
+A +LR M G P+A Y ++I C+ + +A ++ VEM+R
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER------------- 350
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+ +D TY +L++ +C G++ K + D+M KG +P + ++ +KK +
Sbjct: 351 -YECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
+ L L+ P+ IY+ +I G V EA R +
Sbjct: 410 EC---LELMEKMRQIEYHPDIGIYNVVIRLACK---------------LGEVKEAVRLWN 451
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS-HMFSVLALL--TALR 438
M E P + ++I + + +A + + EMV G S + L LL T L+
Sbjct: 452 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLK 511
Query: 439 DHGMYNERS-WVIQNTLRSCNLN 460
D + + W + +C LN
Sbjct: 512 DKKLEMAKDVWSCITSKGACELN 534
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 25/292 (8%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
RF E + D+ T+N +I +C + + + + R M EKG P+ +S+ +I GF
Sbjct: 214 RFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGF 273
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
++ + + EM + G T L+ LC + R+ +A L ++L+ P +
Sbjct: 274 LSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSE 333
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+ +L+ C E + +A M ++ KG P F+ ++ GL GR E
Sbjct: 334 FDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI--------ACTTLVEGLRKSGRTE 385
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+A G + M G+ PD+V++ +++ C + A L++ K + DE TY L
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSK-GYEPDETTYHVL 444
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ G + E +GE+ L +EM K LPD + L++GL
Sbjct: 445 VSGFTKEGRR--------KEGEV-----LVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 130/330 (39%), Gaps = 43/330 (13%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
P+ Y V+ G+ + KA F M ++ PD T++ LI C + A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
F+EM P+ ++F TL+ G+ + M ++MI G FS A T
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGC------RFSEA--TCE 302
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
++ GLC GRV++A G++ + + P Y ++ C + +A E+ E+ +K
Sbjct: 303 ILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
T ++ +L+ G K ++M + G LPDSV +L
Sbjct: 363 ------GQTPCFI--------ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNL 408
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
L+ L + D L L+ + Y P+ Y LV F+
Sbjct: 409 LLRDLCSSDHSTDAN-RLRLLASSKGYE--PDETTYHV---------------LVSGFTK 450
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
G E + ML+ + PD YN L+
Sbjct: 451 EGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y ++++ C + + + ++ + +KG +P ++ ++ G + KA F +M
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFS 159
GILPD+ T++ L++ LCS ++A L S PD+ T+ L+ EG
Sbjct: 396 NAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRK 455
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
+ + ++M+ K +LPD +FTYN ++ GL G+
Sbjct: 456 EGEVLVNEMLDKDMLPD--------IFTYNRLMDGLSCTGK 488
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+ +A M + ++ + + G P + YN +++G G +++AL + M +
Sbjct: 167 YCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAK 225
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD ++ I+I+G+C++ + A +L EM K G + ++ +LI
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEK---GCEPNVV-----------SFNTLIR 271
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
+ + G++ + + + EM G +L++GL ++ R D +L ++ +
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV-- 329
Query: 338 SMPNYIIYDTLIEN-CSNNE-------------------FKSVVGLVKSFSMRGLVNEAA 377
+P+ Y +L+E C N+ F + LV+ G +A+
Sbjct: 330 -LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHC 403
+ M+ PD +NLL+ D C
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLC 414
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
DL YN ++ C V+ G + + M GL PDA S+ I +C+ AY+
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
M + ++P+ +T++ +I+ LC ++ +AY L EM+ + PD T+ ++M C
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
E ++A + +M LPD TYN ++ L +GR + A I GM E
Sbjct: 362 CEVNRATKLLSRMDRTKCLPD--------RHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 216 LSPDAVSYIIVISGFCQNR-ELRKA--------------YELKVEM--DRKVVWG 253
P +Y ++I G + + +L +A Y VEM +R V WG
Sbjct: 414 FYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 25/251 (9%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G+ P A +Y ++ G+ R A + EM ++ + D Y++L+ ALC +
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
Y +FQEM + PD +F +HA C G+ A+ + +M ++P+ ++
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN--------VY 314
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
T+N II LC +V++A +L M + G +PD +Y +++ C + E+ +A +L M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
DR + L D TY ++ G + + + MS + P
Sbjct: 375 DR--------------TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
Query: 307 DSLLINGLDKK 317
+++I+GL +K
Sbjct: 421 YTVMIHGLVRK 431
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 42/336 (12%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M E G+ P ++ C+ + A EF + GI+P A TYS L++ R
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 126 LSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
S A +F EML D + + L+ A C G+ + M +M + G+ PD +S
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD---AYS 280
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
A+F IH C G V A +L M L P+ ++ +I C+N ++ AY L
Sbjct: 281 FAIF-----IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
EM +K G + T+ TY S++ +C E+ + L M LP
Sbjct: 336 LDEMIQK---GANPDTW-----------TYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D ++++ L + R D + +++ + P Y +I G
Sbjct: 382 DRHTYNMVLKLLIRIGRF-DRATEIWEGMSERKF--YPTVATYTVMIH-----------G 427
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
LV+ +G + EA R + M++ P +L
Sbjct: 428 LVRK---KGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 12/187 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D ++ I +C V +L M L P+ ++ ++I C N AY
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
EM QKG PD +TY+S++ C ++ A L M PD T+ ++
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF-LGRVEEALGILRGM 211
G F +A + M + F P + TY +IHGL G++EEA M
Sbjct: 394 IRIGRFDRATEIWEGMSER--------KFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Query: 212 PEMGLSP 218
+ G+ P
Sbjct: 446 IDEGIPP 452
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 38/244 (15%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P + + ++H LC V A G+ P A +Y I++ G+ + R+ A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 240 YELKVEM-DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
++ EM +R V D Y +L++A C G++ + EM +
Sbjct: 228 RKVFDEMLERNCV---------------VDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM--YTSMPNYIIYDTLIENCSNNE 356
G PD+ ++ I+ A H + D M Y +PN ++ +I+ NE
Sbjct: 273 GLKPDAYSFAIFIH-----AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
V++A D M++ PD YN ++ HC V++A +
Sbjct: 328 ---------------KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLS 372
Query: 417 EMVR 420
M R
Sbjct: 373 RMDR 376
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ D+ TYN ++ + + ++++ + MA G SPD+ +Y ++ P
Sbjct: 248 DGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA 307
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M + GI P Y++LI L L + EM+ PD + +T ++
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ GE KA M +M KG LP+ +FTYN++I GLC G EA +L+
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPN--------VFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
M G +P+ V Y ++S + +L +A ++ EM +K
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 25/228 (10%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M + G PD TY+ L+ ++ LF EM PD T+ L+H + G
Sbjct: 244 QMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH---ILG 300
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ +K + H + G P++ Y +I GL G +E L M + G
Sbjct: 301 KGNKPLAALTTLNHMKEV-----GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
PD V Y ++I+G+ + EL KA E+ EM K L + TY S+I
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVK--------------GQLPNVFTYNSMI 401
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
C GE + L EM +G P+ V+ S L++ L K + + +
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + G PD + Y +ITG+ + KA E EM KG LP+ FTY+S+I+ LC
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
EA L +EM S P+ + ++TL+ G+ S+A + +M+ KG
Sbjct: 410 FREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 28/245 (11%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHM 164
P +Y++++ +L ++ ++++ML PD +T+ L+ G+ + +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+M G FSP +TYN ++H L + AL L M E+G+ P + Y
Sbjct: 277 FDEMARDG--------FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGE 284
+I G L +A L+ + LDE+ A D Y +I Y GE
Sbjct: 329 TLIDG------LSRAGNLEA-----CKYFLDEMVKAGCR---PDVVCYTVMITGYVVSGE 374
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
L K + EM+ KG LP+ + +I GL + + L+ PN+++
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGL---CMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 345 YDTLI 349
Y TL+
Sbjct: 432 YSTLV 436
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
++K + + G+ P+ SY ++ FC N AY+ +M ++ ++PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 116 LIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LIQ C K +++ A L +ML+ PD +++TTL+++ C + + +A+ + +M KG
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
PD V YN +I G C R +A +L M G SP++VSY +I G C
Sbjct: 291 CNPDLV--------HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 14/239 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ + +YN +++ CL + + M E+ + PD SY+ +I GFC A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
E +M KG +PD +Y++L+ +LC K +L EAY L M PD + + T++
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT-GFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C E M + VL D ++ G SP +Y +I GLC G +E L M
Sbjct: 306 CRED---------RAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
G SP ++ GFC ++ +A ++ VE+ K L T+ ++ + +ED
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDV-VEVVMKNGETLHSDTWEMVIPLICNED 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G KAF + GV+P+ +YN ++ C + A + M E
Sbjct: 169 GYLQKAFELFKSSRLHGVMPN--------TRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYAS 274
+ PD SY I+I GFC+ ++ A EL LD++ L +G + D +Y +
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMEL-----------LDDM----LNKGFVPDRLSYTT 265
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
L+N+ C + +L + L M KG PD V + +I G ++ R D +
Sbjct: 266 LLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARK--------- 316
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
++ D L CS N S L+ +G+ +E + + M+ + P +V
Sbjct: 317 --------VLDDMLSNGCSPNSV-SYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 367
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
N L+ C V +A ++ +++ G H
Sbjct: 368 SNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 183/449 (40%), Gaps = 59/449 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + + + +Y +I + R E + +L M + +SP L+Y VI N C
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI-----NACAR 223
Query: 93 KAYEFK------LEMDQKGILPDAFTYSSLIQALCSKRRLS-EAYHLFQEMLSP---PDD 142
+++ EM +GI PD TY++L+ A C+ R L EA +F+ M PD
Sbjct: 224 GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T++ L+ K + +M G LPD +YN ++ G ++
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT--------SYNVLLEAYAKSGSIK 334
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
EA+G+ M G +P+A +Y ++++ F Q+ +L +EM
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS------------- 381
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
D TY LI + G +V+TL +M + PD +I K +D
Sbjct: 382 -NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
+ L + A+ + S K+ G++++F L EA A +T
Sbjct: 441 ARKILQYMTANDIVPSS------------------KAYTGVIEAFGQAALYEEALVAFNT 482
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
M E P ++ L++ R V ++ + +V G + + A + A + G
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 443 YNE--RSWVIQNTLRSCNLNDSELHKVLN 469
+ E +++V R C+ ++ L VL+
Sbjct: 543 FEEAVKTYVDMEKSR-CDPDERTLEAVLS 570
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 49/369 (13%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
EM +G+ F+Y++LI A R + L M + P +T+ T+++AC G
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 157 -EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
++ + +M H+G+ PD + TYN ++ G +EA + R M + G
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPD--------IVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+ PD +Y ++ F + R L K +L EM L D +Y L
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG--------------GSLPDITSYNVL 323
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
+ AY G + + + + +M G P++ S+L+N + R D + L + +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-- 381
Query: 336 YTSMPNYIIYDTLIENCSNNE-FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ P+ Y+ LIE FK VV L HD M+E N +PD
Sbjct: 382 -NTDPDAATYNILIEVFGEGGYFKEVVTLF---------------HD-MVEENIEPDMET 424
Query: 395 YNLLIFDHCRRLNVHK-AYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNT 453
Y +IF C + +H+ A + M V + ++ A +Y E + V NT
Sbjct: 425 YEGIIF-ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY-EEALVAFNT 482
Query: 454 LRSCNLNDS 462
+ N S
Sbjct: 483 MHEVGSNPS 491
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
G++ F R+ E IQ D+ TYN ++ + ++ + R M + G+ PD +Y ++
Sbjct: 230 GLLGLFAEMRH-EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-- 139
+ F R K + EM G LPD +Y+ L++A + EA +F +M +
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 140 -PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
P+ T++ L++ G + + +M PD TYN +I
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA--------TYNILIEVFGEG 400
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVI 227
G +E + + M E + PD +Y +I
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+++ ++TF + R VC S D+ +YN +++ + +++ +G+ M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G +P+A +Y ++ F + + LEM PDA TY+ LI+
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD------- 176
E LF +M+ PD T+ ++ AC G A + M ++P
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 177 ----------------FVT----GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
F T G +P++ T++++++ G V+E+ IL + + G+
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+ ++ I + Q + +A + V+M++
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 187/446 (41%), Gaps = 54/446 (12%)
Query: 15 FRHMVRNG---VVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
F+ ++R G + R+ SE ++ TYN ++ L R+E + M +G+
Sbjct: 227 FKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGI 286
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
SPD ++ +I GFC + +A + +EM I P +Y+++I+ + R+ +
Sbjct: 287 SPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLR 346
Query: 132 LFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+F+EM S P+ T++TL+ C G+ +A ++ M+ K + P + F L +
Sbjct: 347 IFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQ 406
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+ G + A +L+ M + + +A Y ++I C+ +A +L
Sbjct: 407 SKA-------GDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKL------ 453
Query: 249 KVVWGLDEVTYAYLMQGLSDEDT-------YASLINAYCAQGELFKVLTLDDEMSHKGSL 301
LD + ++ L +DT Y +I C G+ K L ++ +G
Sbjct: 454 -----LDTLIEKEII--LRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV 361
+++ LI G K+ D+ +L I++ N Y+ LI
Sbjct: 507 DQDALNN-LIRGHAKEG-NPDSSYEILKIMSRRGVPRESN--AYELLI------------ 550
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV-- 419
KS+ +G +A A D+M+E + PD +++ +I V A + M M+
Sbjct: 551 ---KSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDK 607
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNE 445
G +M + +L AL G E
Sbjct: 608 NVGIEDNMDLIAKILEALLMRGHVEE 633
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 150/367 (40%), Gaps = 54/367 (14%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
R ++ L F +R RF + I D AT+N +I C +++++ +
Sbjct: 255 RHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFV 314
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
M + P +SY +I G+ EM GI P+A TYS+L+ LC
Sbjct: 315 EMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG 374
Query: 125 RLSEAYHLFQEML----SPPDDITFTTLMHACCLEGEFSKAFHMHHQMI---------HK 171
++ EA ++ + M+ +P D+ F L+ + G+ + A + M H
Sbjct: 375 KMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHY 434
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GVL + S YN I L L +E+ + ILR + + P A Y +I C
Sbjct: 435 GVLIENQCKAS----AYNRAIKLLDTL--IEKEI-ILRHQDTLEMEPSA--YNPIIEYLC 485
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ-GLSDEDTYASLINAYCAQG------E 284
N + KA EV + LM+ G+ D+D +LI + +G E
Sbjct: 486 NNGQTAKA----------------EVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYE 529
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ K+ MS +G +S LLI K D K L ++ D +P+ +
Sbjct: 530 ILKI------MSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVED---GHVPDSSL 580
Query: 345 YDTLIEN 351
+ ++IE+
Sbjct: 581 FRSVIES 587
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 148/350 (42%), Gaps = 45/350 (12%)
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDI-TFTTLMHACCLE 155
L+M +KG+ D + LI++ + E+ +FQ+M L I ++ +L
Sbjct: 174 LDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRR 233
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G + A ++M+ +GV P TYN ++ G R+E AL M G
Sbjct: 234 GRYMMAKRYFNKMVSEGV--------EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG 285
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--------- 266
+SPD ++ +I+GFC+ +++ +A +L VEM + G V+Y +++G
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI-GPSVVSYTTMIKGYLAVDRVDDG 344
Query: 267 -------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+ TY++L+ C G++ + + M K P +S+ +
Sbjct: 345 LRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD--NSIFLKL 402
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL 372
L +++ D A ++ A Y LIEN C + + + L+ + + +
Sbjct: 403 LVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEI 462
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+ R DT+ + + + YN +I C KA ++ ++++ G
Sbjct: 463 I---LRHQDTL-----EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 29/295 (9%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS-PDALSYRYVITGFCNNR 89
R+ ++++ + + YN II+ C + K + R + ++G+ DAL+ +I G
Sbjct: 465 RHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNN--LIRGHAKEG 522
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFT 146
P +YE M ++G+ ++ Y LI++ SK +A M+ PD F
Sbjct: 523 NPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFR 582
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
+++ + +G A + MI K V G + I+ L G VEEALG
Sbjct: 583 SVIESLFEDGRVQTASRVMMIMIDKNV------GIEDNMDLIAKILEALLMRGHVEEALG 636
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ + + G + D S + V+S + K + +E D + +
Sbjct: 637 RIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFS------------- 683
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+Y +++A G+ ++ ++ KGS D LI L+++ TK
Sbjct: 684 ----SYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTK 734
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 195/497 (39%), Gaps = 64/497 (12%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE---KGLSPDALSYRYVITGF 85
A + Q D Y+ +I+ +++ V +LR E L D +I GF
Sbjct: 221 AKMRQDGYQSDFVNYSLVIQSLTRSNKID-SVMLLRLYKEIERDKLELDVQLVNDIIMGF 279
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
+ P KA + G+ T S+I AL R EA LF+E+ P
Sbjct: 280 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+ L+ G A M +M +GV PD TY+ +I GR E
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD--------EHTYSLLIDAYVNAGRWE 391
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-------DRKV----- 250
A +L+ M + P++ + +++GF E +K +++ EM DR+
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 251 -VWG----LDEVTYAY---LMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
+G LD + L +G+ D T+ +LI+ +C G + + M +G L
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV 361
P + +++IN + R D K L + + + +PN + + TL++
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI---LPNVVTHTTLVD----------- 557
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
+ G N+A + M KP +YN LI + +R +A N + M
Sbjct: 558 ----VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 422 GFVSHMFSVLALLTAL----RDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFP 477
G + ++ +L+ A RD + ++ +N ++ + + L K L +D +
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673
Query: 478 PIGATLLDVLAEIAMDG 494
P+ V E+ M G
Sbjct: 674 PV------VYEEMIMSG 684
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 161/419 (38%), Gaps = 44/419 (10%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
AT II R + + + + G+ P +Y ++ G+ A E
Sbjct: 305 ATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M+++G+ PD TYS LI A + R A + +EM + P+ F+ L+ GE
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+ K F + +M GV PD F YN +I ++ A+ M G+
Sbjct: 425 WQKTFQVLKEMKSIGVKPD--RQF------YNVVIDTFGKFNCLDHAMTTFDRMLSEGIE 476
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD V++ +I C++ A E+ M+R+ L TY +IN
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC--------------LPCATTYNIMIN 522
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT------KAHLLLII 331
+Y Q + L +M +G LP+ V + L++ K R D + L
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVV--GLVKS-FSMRGLVN---------EAARA 379
+ MY ++ N L E N F+ + GL S ++ L+N EA
Sbjct: 583 SSTMYNALINAYAQRGLSEQAV-NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
M E KPD Y L+ R K +Y EM+ G + L +ALR
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 138/362 (38%), Gaps = 51/362 (14%)
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
++ L+P L+Y +I N KA +M Q G D YS +IQ+L ++
Sbjct: 192 KQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKID 249
Query: 128 EA--YHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L++E+ D ++ G+ SKA + TG S
Sbjct: 250 SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQ--------ATGLS 301
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
T +II L GR EA + + + G+ P +Y ++ G+ + L+ A +
Sbjct: 302 AKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESM 361
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
EM+++ G+S DE TY+ LI+AY G + EM
Sbjct: 362 VSEMEKR---------------GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSV 360
P+S + S L+ G + + T ++ + + P+ Y+ +I+
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKT----FQVLKEMKSIGVKPDRQFYNVVID---------- 452
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
+F ++ A D ML +PD +N LI HC+ A M+ M R
Sbjct: 453 -----TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 421 YG 422
G
Sbjct: 508 RG 509
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 3/154 (1%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R S+ I ++ T+ ++ + R + L M GL P + Y +I +
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
+A M G+ P +SLI A RR +EA+ + Q M PD
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
+T+TTLM A +F K ++ +MI G PD
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ DL TYN++IK C I+ M KG+ P++ S+ +I+GF +
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ M +G+ TY+ IQ+LC +++ EA L MLS P+ +T++ L+H
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C E +F +A + M+++G PD S FT +I+ LC G E AL + +
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPD-----SECYFT---LIYYLCKGGDFETALSLCKESM 354
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
E P +++G ++ ++ +A EL
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKA 161
GI PD TY+ +I+ C S +Y + EM P+ +F ++ E + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
+ M +GV + + TYN I LC + +EA +L GM G+ P+ V
Sbjct: 242 GKVLAMMKDRGV--------NIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTV 293
Query: 222 SYIIVISGFCQNRELRKAYEL-KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYC 280
+Y +I GFC + +A +L K+ ++R D + Y +LI C
Sbjct: 294 TYSHLIHGFCNEDDFEEAKKLFKIMVNRGCK---------------PDSECYFTLIYYLC 338
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
G+ L+L E K +P I L+NGL K ++ ++ K
Sbjct: 339 KGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK 382
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 137/330 (41%), Gaps = 42/330 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEML-SPPDDITFTTLMHACCLEGEFSKAFHMHHQ 167
D +S+ ++ L K+ S +L + + PD + HA L +++A + H
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL---YAQANMLDHS 135
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM-GLSPDAVSYIIV 226
+ L F S + + NA++ +EA + MP+M G+ PD +Y +
Sbjct: 136 LRVFRDLEKF--EISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRM 193
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
I FC++ +Y + EM+RK + + ++ ++ G ED E+
Sbjct: 194 IKVFCESGSASSSYSIVAEMERKGIKP-NSSSFGLMISGFYAEDK----------SDEVG 242
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYD 346
KVL + M +G ++ I L K+ ++K+ KA L +++ M PN + Y
Sbjct: 243 KVLAM---MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM---KPNTVTYS 296
Query: 347 TLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
LI C+ ++F+ L K RG KPD Y LI+ C+
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGC----------------KPDSECYFTLIYYLCKG 340
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
+ A ++ E + +V FS++ L
Sbjct: 341 GDFETALSLCKESMEKNWVPS-FSIMKSLV 369
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F R S ++ D A YN II C + ++ I + GL PD +Y +I F
Sbjct: 2 FKVMRES-NMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFT 146
+ G+A + EM ++G++PD TY+S+I LC + +L++A + + TF
Sbjct: 60 S---LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSC------STFN 110
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
TL++ C ++ +M +G++ + + TY +IHG +G AL
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVI--------TYTTLIHGFRQVGDFNTALD 162
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
I + M G+ ++++ ++ C +ELRKA + ++
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YN IIHGLC G+ +EA I + GL PD +Y ++I + L +A +L EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 248 RKVVWGL--DEVTYAYLMQGLSDED-------------TYASLINAYCAQGELFKVLTLD 292
R+ GL D +TY ++ GL ++ T+ +LIN YC + + L
Sbjct: 73 RR---GLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLF 129
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC 352
EM +G + + + + LI+G + ++++ +Y+S + D L + C
Sbjct: 130 CEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF--RDILPQLC 187
Query: 353 SNNEFKSVVGLV 364
S E + V ++
Sbjct: 188 SRKELRKAVAML 199
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 13 KTFRHMVRNGVV-------------CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKG 59
K + M+R G+V C+ + + + +T+N +I +C RV+ G
Sbjct: 66 KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDG 125
Query: 60 VGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
+ + M +G+ + ++Y +I GF A + EM G+ + T+ ++
Sbjct: 126 MNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQ 185
Query: 120 LCSKRRLSEAYH-LFQEMLSPPDDITF 145
LCS++ L +A L Q+ +++T
Sbjct: 186 LCSRKELRKAVAMLLQKSSMVSNNVTL 212
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVG-ILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
S ++ D+ T+N + K + + I+ M + P+ + ++ G+C
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL---SEAYHLFQEMLSPPDDITFTTL 148
+A F M + G+ P+ F ++SLI+ + + E L +E PD +TF+TL
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
M+A G+ + ++ M+ G+ PD + ++ + G G E+A IL
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEGGIDPD--------IHAFSILAKGYARAGEPEKAEQIL 659
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M + G+ P+ V Y +ISG+C E++KA ++ +M V GLS
Sbjct: 660 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV--------------GLSP 705
Query: 269 E-DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
TY +LI + + +K L +M K +P L+ +G + A+
Sbjct: 706 NLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSNDANT 765
Query: 328 L 328
L
Sbjct: 766 L 766
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 188/478 (39%), Gaps = 71/478 (14%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + L TY ++ + + ++ + + GL PD + + +I + +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLM 149
A + +M + G P A T+++LI+ +L E+ L ML P+D T L+
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT----------------------------GF 181
A C + + +A+++ ++M GV PD VT
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P + T I++G C G++EEAL M E+G+ P+ + +I GF
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN------- 580
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+MD G+ EV G+ D T+++L+NA+ + G++ + + +M G
Sbjct: 581 ---DMD-----GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKS 359
PD S+L G AR + + ++ + PN +IY +I CS E K
Sbjct: 633 DPDIHAFSILAKGY---ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ + K M G+V P+ Y LI+ KA + +M
Sbjct: 690 AMQVYK--KMCGIV-------------GLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFP 477
V ++ + + G+ N NTL S S+L+ + N I + + P
Sbjct: 735 GKNVVPTRKTMQLIADGWKSIGVSNSND---ANTLGSSFSTSSKLN-IPNNIASSRSP 788
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TYN ++ + + + ++ +L M + G SPD +Y ++ P A
Sbjct: 256 DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL 315
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
M + G+ P +++LI L +L + E + PD + +T ++
Sbjct: 316 NHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISG 375
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
GE KA M +M KG LP+ +FTYN++I G C G+ +EA +L+ M G
Sbjct: 376 GELEKAEEMFKEMTEKGQLPN--------VFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+P+ V Y +++ ++ +A+E+ +M K
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 148/394 (37%), Gaps = 68/394 (17%)
Query: 25 CRFTAARNSE--SIQQDLATYNKIIKQHCL--MQRVEKGVGILRGMAEKGLSPDALSYRY 80
C F N E S+++ K+ L +Q+ G + E +S L R
Sbjct: 55 CEFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVRE 114
Query: 81 VITGFC-------NNRCPGKAYEFKLEMD-QKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
V+ G RC AY+F + Q+ A Y L++ L
Sbjct: 115 VLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRL 174
Query: 133 FQEMLS---PPDDITFTTLMHACCLEG-------EF--SKAF------HMHHQMIHK--G 172
EM+ P TF L+ C G +F SK F H ++ ++H G
Sbjct: 175 IDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLG 234
Query: 173 V----LPDFV------TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
V L D+V GF+P + TYN ++ LG+ + +L M + G SPD +
Sbjct: 235 VKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYT 294
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS--------------- 267
Y I++ + A L M R+V + + L+ GLS
Sbjct: 295 YNILLHHLATGNKPLAALNLLNHM-REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDET 353
Query: 268 -------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
D Y +I Y + GEL K + EM+ KG LP+ + +I G +
Sbjct: 354 VKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKF 413
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN 354
K+ A L + + PN+++Y TL+ N N
Sbjct: 414 KEACALLKEMESR---GCNPNFVVYSTLVNNLKN 444
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G +PD + Y +ITG+ + KA E EM +KG LP+ FTY+S+I+ C + EA
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
L +EM S P+ + ++TL++ G+ +A + M+ KG
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 151/359 (42%), Gaps = 52/359 (14%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
T+++LI RL++A +LF EML P D +TF T++H C G S+A + +M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
KG+ PD TYN ++ G +E AL R + ++GL PD V++ V+
Sbjct: 367 EEKGISPD--------TKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE------------------- 269
CQ + + + + EMDR + +DE + +MQ +E
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSI-RIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL 477
Query: 270 --DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK-ARTKDTKAH 326
T A++I+ Y +G + T+ K ++ D L N + K + K +
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETV---FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKA 534
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L L + P+ Y++L F+ + G+ LV+EA R ML+
Sbjct: 535 LSLFKGMKNQGTWPDECTYNSL--------FQMLAGV-------DLVDEAQRILAEMLDS 579
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
KP Y +I + R + A ++Y M + G + +L+ + GM E
Sbjct: 580 GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 174/449 (38%), Gaps = 55/449 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D T+N +I + + +L+ M EKG+SPD +Y +++ + A E+
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLE 155
++ + G+ PD T+ +++ LC ++ ++E + EM D+ + +M E
Sbjct: 399 RKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNE 458
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM- 214
G +A K + F + T A+I G EA + G M
Sbjct: 459 GLVVQA---------KALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMS 509
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED---- 270
G D + Y ++I + + + KA L M + W DE TY L Q L+ D
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP-DECTYNSLFQMLAGVDLVDE 568
Query: 271 ------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
TYA++I +Y G L + L + M G P+ V+ LIN
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
G + ++ + ++ + N+I+ +LI K++S G
Sbjct: 629 GFAESGMVEEAIQYFRMMEE---HGVQSNHIVLTSLI---------------KAYSKVGC 670
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLA 432
+ EA R +D M + PD A N ++ C L + +R + S
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKGTCDVISFAT 729
Query: 433 LLTALRDHGMYNERSWVIQNTLRSCNLND 461
++ + GM +E V + S L+D
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 112/300 (37%), Gaps = 66/300 (22%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F RN + D+ YN +IK + + EK + + +GM +G
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG---------------- 545
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDI 143
PD TY+SL Q L + EA + EML P
Sbjct: 546 -------------------TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
T+ ++ + G S A ++ M GV P+ V Y ++I+G G VEE
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEV--------VYGSLINGFAESGMVEE 638
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQN---RELRKAYE-----------------LK 243
A+ R M E G+ + + +I + + E R+ Y+ L
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+ D +V + + A +G D ++A+++ Y G L + + + +EM G L D
Sbjct: 699 LCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 174/441 (39%), Gaps = 50/441 (11%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
S D TYN+++ + ++ G++ M +KG+ P+A++Y VI + +A
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
+ M + G +P+ TY++++ L K R +E + +M S P+ T+ T++
Sbjct: 406 LKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL 465
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C +G + +M GF P T+N +I G +A + M
Sbjct: 466 CGNKGMDKFVNRVFREMKS--------CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G + +Y +++ + + R + +M K G E +
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK---GFKPT-----------ETS 563
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDS-VIDSLLINGLDKKARTKDTKAHLLLI 330
Y+ ++ Y G + +++ + P ++ +LL+ +A +A L
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 623
Query: 331 IADYMYTSMPNYIIYDTLIENCS-NNEFKSVVGLVKS-------------------FSMR 370
Y P+ +I+++++ + NN + G+++S + R
Sbjct: 624 KHGY----KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 371 GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
G +A T+ + KPD YN +I CRR + +A M EM G +F+
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 431 LALLTALRDHGMYNERSWVIQ 451
++ GM+ E VI+
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIE 760
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 122/304 (40%), Gaps = 33/304 (10%)
Query: 40 LATYNKIIKQHCLMQRVEKGV-GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
L TYN I+ M R + + G+L M KGL D + V++ +A EF
Sbjct: 245 LVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
E+ G P TY++L+Q +EA + +EM P D +T+ L+ A
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA 364
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A + M KGV+P+ + TY +I G+ +EAL + M E G
Sbjct: 365 GFSKEAAGVIEMMTKKGVMPNAI--------TYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMD------RKVVW----------GLDEVTY 259
P+ +Y V+S + + ++ +M + W G+D+
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN 476
Query: 260 AYLMQGLS-----DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ S D DT+ +LI+AY G + EM+ G + L+N L
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 315 DKKA 318
+K
Sbjct: 537 ARKG 540
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 141/358 (39%), Gaps = 61/358 (17%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D +TT++HA G++ KA + +M G SP L TYN I+ +GR
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP--------SPTLVTYNVILDVFGKMGR 260
Query: 201 V-EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+ LG+L M GL D + V+S + LR+A E E+ + + VTY
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTY 319
Query: 260 AYLMQGL----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
L+Q +D TY L+ AY G + + + M+
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE------- 350
KG +P+++ + +I+ K + + L L + +PN Y+ ++
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEA---LKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 351 --------------NCSNNE--FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
CS N + +++ L + M VN R M ++PD
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN---RVFREMKSCGFEPDRDT 493
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
+N LI + R + A MY EM R GF + + + ALL AL G + VI +
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G PD + + +++ F N +A + + G+ PD TY+SL+ + +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 130 YHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+ + + PD +++ T++ C G +A M +M +G+ P +F
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI--------RPCIF 737
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
TYN + G +G E ++ M + P+ +++ +V+ G+C+
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + DL TYN ++ + K IL+ + + L PD +SY VI GFC +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A EM ++GI P FTY++ + + +E + + M P+++TF ++
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 151 ACCLEGEFSKA 161
C G++S+A
Sbjct: 780 GYCRAGKYSEA 790
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAF 162
I P TY+S+I C + R+ +A + M S PD +TF+TL++ C
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ +M +G++ + VT Y +IHG C +G ++ A +L M G++PD ++
Sbjct: 66 EIFCEMHRRGIVANTVT--------YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 223 YIIVISGFCQNRELRKAYEL 242
+ +++G C +ELRKA+ +
Sbjct: 118 FHCMLAGLCSKKELRKAFAI 137
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TYN +I C RV+ +L MA KG SPD +++ +I G+C + E EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
++GI+ + TY++LI C L A L EM+S PD ITF ++ C + E
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 159 SKAF 162
KAF
Sbjct: 132 RKAF 135
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P TYN++I G C RV++A +L M G SPD V++ +I+G+C+ + + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
EM R+ + +++ TY +LI+ +C G+L L +EM G P
Sbjct: 68 FCEMHRRGI--------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 303 DSVIDSLLINGLDKK 317
D + ++ GL K
Sbjct: 114 DYITFHCMLAGLCSK 128
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 3 LLRDSFTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQR 55
+LR S T T+ M+ R R + S+ D+ T++ +I +C +R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
V+ G+ I M +G+ + ++Y +I GFC A + EM G+ PD T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 116 LIQALCSKRRLSEAYHLFQEMLSPPD 141
++ LCSK+ L +A+ + +++ D
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSED 146
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 122/316 (38%), Gaps = 76/316 (24%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD T+ L+H C G F A + +M+ K V P VT + +IHGLC
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT--------FGTLIHGLCKDS 201
Query: 200 RVEEALGILRGMPEM-GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
RV+EAL + M ++ G+ P Y +I CQ EL A++LK E
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE------------- 248
Query: 259 YAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
AY + D Y++LI++ G +V + +EMS KG PD+V ++LING
Sbjct: 249 -AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF---- 303
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
C N+ +S A R
Sbjct: 304 ---------------------------------CVENDSES----------------ANR 314
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
D M+E KPD YN+++ R +A ++ +M R G S + L
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Query: 439 DHGMYNERSWVIQNTL 454
+ + E + ++ L
Sbjct: 375 EGLQFEEAAVILDEML 390
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 26/246 (10%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PDA +Y +I G + C A + EM +K + P T+ +LI LC R+ EA +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 133 FQEMLS----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+ML P + +L+ A C GE S AF + + + D Y
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA--------IY 261
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+ +I L GR E IL M E G PD V+Y ++I+GFC + A + +D
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV---LDE 318
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
V GL +Y M ++ + + + L ++M +G PD++
Sbjct: 319 MVEKGLKPDVISYNM-----------ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 309 LLINGL 314
++ +GL
Sbjct: 368 IVFDGL 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 142/332 (42%), Gaps = 37/332 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D TYN +I + + + M +K + P +++ +I G C + +A +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 97 FKLEMDQK-GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHAC 152
K +M + G+ P Y+SLI+ALC LS A+ L E D ++TL+ +
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G ++ + +M KG PD VT YN +I+G C E A +L M
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVT--------YNVLINGFCVENDSESANRVLDEMV 320
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD---- 268
E GL PD +SY +++ F + ++ +A L +M R+ D ++Y + GL +
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGC-SPDTLSYRIVFDGLCEGLQF 379
Query: 269 ------------------EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
D + C G+L ++L+ H+G D+ + S++
Sbjct: 380 EEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL-EILSKVISSLHRGIAGDADVWSVM 438
Query: 311 INGLDKKARTKDTKAHLL-LIIADYMYTSMPN 341
I + K+ D+ LL + D ++MP
Sbjct: 439 IPTMCKEPVISDSIDLLLNTVKEDGPLSAMPQ 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ D A Y+ +I R + IL M+EKG PD ++Y +I GFC A
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
EM +KG+ PD +Y+ ++ ++ EA +LF++M PD +++ +
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 153 CLEGEFSKAFHMHHQMIHKGVLP--DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +F +A + +M+ KG P D + GF + LC G++E ++
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGF----------LQKLCESGKLEILSKVISS 423
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ G++ DA + ++I C+ + + +L
Sbjct: 424 L-HRGIAGDADVWSVMIPTMCKEPVISDSIDL 454
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 20 RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R+ V + + + D TYN +I C+ E +L M EKGL PD +SY
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYN 332
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
++ F + +A +M ++G PD +Y + LC + EA + EML
Sbjct: 333 MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 11/226 (4%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F + QQ + YN ++ C ++ ++R M KGL PD +Y ++ G+C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDI 143
+ +A EF EM ++G P A LI+ L + L A + +M PD
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TF L+ A GE M++ G+ D + TY +I + +G+++E
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVD--------IDTYKTLIPAVSKIGKIDE 340
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
A +L E G P Y +I G C+N A+ +M K
Sbjct: 341 AFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 122/331 (36%), Gaps = 76/331 (22%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQ 167
P + Y L ++L S ++ + + ++M DI+ TL C + ++ K H+
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETL---CFIIEQYGKNGHVDQA 165
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+ +P G + YN+++H LC + A ++R M GL P
Sbjct: 166 VELFNGVPK-TLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP--------- 215
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
D+ TYA L+N +C+ G++ +
Sbjct: 216 ----------------------------------------DKRTYAILVNGWCSAGKMKE 235
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
DEMS +G P + LLI GL + K + + +P+ ++
Sbjct: 236 AQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF---VPDIQTFNI 292
Query: 348 LIENCSNN--------------------EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
LIE S + + + L+ + S G ++EA R + +E
Sbjct: 293 LIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+KP ++Y +I CR A++ + +M
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D A +N +++ C + + + + + PD ++ +++G+ + +A F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM KG+ PD TY+SLI C R + +AY L +M PD IT+TT++ L
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ KA + +M G PD YNA I C R+ +A ++ M + G
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAA--------YNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
LSP+A +Y + +L +++EL V M
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRM 377
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ TYN +I +C + +EK ++ M E+ +PD ++Y VI G P K
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM + G PD Y++ I+ C RRL +A L EM+ P+ T+
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPD---------------------------FVTGFSP 183
L + +++ ++ +M+ LP+ V GF
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGS 419
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ ++ LC L +VEEA L M E G P VS+
Sbjct: 420 YSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 104 KGILPDAFT---YSSLIQALCSKRRLSEA---YHLFQEMLSP------------------ 139
K ++PD F +++L++ LC ++ +++A YH + P
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEA 230
Query: 140 -------------PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
PD +T+ +L+ C + E KA+ + +M + PD +T
Sbjct: 231 EAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVIT------- 283
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
Y +I GL +G+ ++A +L+ M E G PD +Y I FC R L A +L EM
Sbjct: 284 -YTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEM 342
Query: 247 DRK 249
+K
Sbjct: 343 VKK 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 136/383 (35%), Gaps = 89/383 (23%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG---ILPDAFTYS-SLIQ 118
+RG S D + Y I G NR + +E +E +K I P +
Sbjct: 101 IRGFYHSSFSLDTMLY---ILG--RNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVA 155
Query: 119 ALCSKRRLSEAYHLFQEMLSPP-DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
LCS R+ E++ F+ ++ D F L+ C E + A +++H + H+
Sbjct: 156 KLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ------ 209
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
F P L T+N ++ G E ++G GL PD V
Sbjct: 210 ---FQPDLQTFNILLSGWKSSEEAEAFFEEMKGK---GLKPDVV---------------- 247
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
TY SLI+ YC E+ K L D+M
Sbjct: 248 ---------------------------------TYNSLIDVYCKDREIEKAYKLIDKMRE 274
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
+ PD + + +I GL + D +L + + Y P+ Y+ I N
Sbjct: 275 EEETPDVITYTTVIGGLGLIGQP-DKAREVLKEMKE--YGCYPDVAAYNAAIRN------ 325
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
F + + +A + D M++ P+ YNL ++ +++ +Y+
Sbjct: 326 ---------FCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVR 376
Query: 418 MVRYGFVSHMFSVLALLTALRDH 440
M+ + + S + L+ + H
Sbjct: 377 MLGNECLPNTQSCMFLIKMFKRH 399
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
+ V++G+ + R + G PD ++Y +I C +A EM KG+ P TY
Sbjct: 593 EGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATY 652
Query: 114 SSLIQALCSK----RRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
+S+I C + R LS ++++ +P D IT+T+L+H C G S+A ++M
Sbjct: 653 NSMIDGWCKEGEIDRGLSCIVRMYEDEKNP-DVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII---- 225
K P+ +T + A+I GLC G EAL R M E + PD+ Y+
Sbjct: 712 GKDCYPNRIT--------FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSS 763
Query: 226 ------VISGFCQNRELRKAYELKVEMDR 248
+ +GF RE+ V +DR
Sbjct: 764 FLSSENINAGFGIFREMVHKGRFPVSVDR 792
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 27/293 (9%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
++K+ C R L +A +G ++ I G N + E ++ G
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAF 162
PD Y LI+ALC R EA LF EM+S P T+ +++ C EGE +
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+M PD + TY ++IHGLC GR EA+ M P+ ++
Sbjct: 670 SCIVRMYEDEKNPDVI--------TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRIT 721
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
++ +I G C+ +A EM+ K + V + + LS E+ A
Sbjct: 722 FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF------- 774
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDS--LLINGLDKKARTKDTKAHLLLIIAD 333
+F+ EM HKG P SV + L +N K T +L +I D
Sbjct: 775 -GIFR------EMVHKGRFPVSVDRNYMLAVNVTSKFVEDLRTSCYLTCLIKD 820
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 147/385 (38%), Gaps = 59/385 (15%)
Query: 50 HCLMQ--RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGIL 107
+CL++ +V+ V +L + + GL P + Y +I G C ++ + EM G+
Sbjct: 447 NCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVE 506
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTLMHACCLEGEFSKAFH 163
P FT + + L + A L ++M P T T L+ C G A
Sbjct: 507 PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT-TFLVKKLCENGRAVDACK 565
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ +G L V A I GL V+ L + R + G PD ++Y
Sbjct: 566 YLDDVAGEGFLGHMVAS--------TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG 283
++I C+ +A L EM K GL TY S+I+ +C +G
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSK---GLKPTVA-----------TYNSMIDGWCKEG 663
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM---- 339
E+ + L+ M PD + + LI+GL R + A + + M
Sbjct: 664 EIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSE---------AIFRWNEMKGKD 714
Query: 340 --PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
PN I + LI+ GL K G EA M E +PD AVY
Sbjct: 715 CYPNRITFMALIQ-----------GLCKC----GWSGEALVYFREMEEKEMEPDSAVYLS 759
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ N++ + ++ EMV G
Sbjct: 760 LVSSFLSSENINAGFGIFREMVHKG 784
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ ++ +ATYN +I C +++G+ + M E +PD ++Y +I G C + P
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPS 701
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A EM K P+ T+ +LIQ LC EA F+EM PD + +L+
Sbjct: 702 EAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLV 761
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLP 175
+ + F + +M+HKG P
Sbjct: 762 SSFLSSENINAGFGIFREMVHKGRFP 787
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 172/430 (40%), Gaps = 72/430 (16%)
Query: 56 VEKGVGILRGMAEKGLS-PDALSYRYVITGFC-NNRCPGKAYEFKL-EMDQKGILPDAFT 112
V++ + + E GL P+A +Y ++ +N + E +L EM G D FT
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPP--DDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
+ ++Q C+ + A +F E+LS D+ T L+ + C G+ KAF + +
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEE 276
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+ + ++ T Y +IHG R+++A + M MG++ D Y ++I G
Sbjct: 277 RDIRLNYKT--------YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGL 328
Query: 231 CQNRELRKAYELKVEMDRK----------------------------VVWGLDE----VT 258
C++++L A L +E+ R ++ +D+ +
Sbjct: 329 CKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLL 388
Query: 259 YAYLMQGLSDEDTY-------ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
Y L +G D +L+ Y + G V L D +K LPDS S++I
Sbjct: 389 YKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH--NKAILPDSDSLSIVI 446
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
N L K + L I+ + + +P ++Y+ +IE G+ K G
Sbjct: 447 NCLVKANKVDMAVTLLHDIVQNGL---IPGPMMYNNIIE-----------GMCK----EG 488
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
E+ + M + +P N + R + A ++ +M YGF +
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTT 548
Query: 432 ALLTALRDHG 441
L+ L ++G
Sbjct: 549 FLVKKLCENG 558
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 78/193 (40%), Gaps = 25/193 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN-------RCP 91
D+ Y+ +IK C R + + M KGL P +Y +I G+C C
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+ YE D+K PD TY+SLI LC+ R SEA + EM P+ ITF L
Sbjct: 673 VRMYE-----DEKN--PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMAL 725
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C G +A +M K + PD Y +++ + GI
Sbjct: 726 IQGLCKCGWSGEALVYFREMEEKEMEPDSA--------VYLSLVSSFLSSENINAGFGIF 777
Query: 209 RGMPEMGLSPDAV 221
R M G P +V
Sbjct: 778 REMVHKGRFPVSV 790
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 121/311 (38%), Gaps = 46/311 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L +N ++ C + V K + M ++ +PD+ +Y ++ G+ KA E
Sbjct: 202 NLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVF 260
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLE 155
EM G PD TYS ++ LC R+ EA + + M + P ++ L+H E
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
+A +M G+ D G +P +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N I+ L G +EA + R M ++ PDA +Y +VI FC+ +E+ A ++ M +
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRK 439
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
K V+ T++ LIN C + K L +EM G P V
Sbjct: 440 KGVF--------------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG 485
Query: 309 LLINGLDKKAR 319
L L K+ R
Sbjct: 486 RLRQLLIKEER 496
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 4 LRDSFTATLKTFRHMVRN-GVVCRFTAARN------SESIQQDLATYNKIIKQHCLMQRV 56
+RD FT KT+ ++ G AR D+ TY+ ++ C RV
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
++ +GI+R M P Y ++ + +A + LEM++ G+ D ++SL
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 117 IQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
I A C R+ Y + +EM S P+ + ++ GE +AF + +MI K
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVC 407
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
PD TY +I C +E A + + M + G+ P ++ ++I+G C+
Sbjct: 408 EPD--------ADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEE 459
Query: 234 RELRKAYELKVEMDRKVVWGLDE--VTYAYLMQGLSDED 270
R +KA L EM + G+ VT+ L Q L E+
Sbjct: 460 RTTQKACVLLEEM---IEMGIRPSGVTFGRLRQLLIKEE 495
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 141/373 (37%), Gaps = 83/373 (22%)
Query: 92 GKAYEFKLEMD-----QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
K ++KL D +K + + T+ +++ +++ EA + F M PP+ +
Sbjct: 145 AKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 204
Query: 144 TFTTLMHACC-----------------------------LEG-----EFSKAFHMHHQMI 169
F L+ A C LEG KA + +MI
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
G PD V TY+ ++ LC GRV+EALGI+R M P Y +++
Sbjct: 265 DAGCHPDIV--------TYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 316
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
+ L +A + +EM+R G+ +D + SLI A+C + V
Sbjct: 317 YGTENRLEEAVDTFLEMERS---GMK-----------ADVAVFNSLIGAFCKANRMKNVY 362
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
+ EM KG P+S ++++ L ++ + + ++ +I
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA------------------FDVFRKMI 404
Query: 350 ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
+ C + + ++K F + + A + M + P +++LI C
Sbjct: 405 KVCEPDA-DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 410 KAYNMYMEMVRYG 422
KA + EM+ G
Sbjct: 464 KACVLLEEMIEMG 476
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 110/277 (39%), Gaps = 45/277 (16%)
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
T+ ++ +V+EA+ M + L P+ V++ ++S C+++ +RKA E+ M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 247 -DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
DR + D TY+ L++G E E+F+ EM G PD V
Sbjct: 230 RDR---FTPDSKTYSILLEGWGKEPNLPK-------AREVFR------EMIDAGCHPDIV 273
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM--PNYIIYDTLIENCSNNEFKSVVGL 363
S++++ L K R + L I M S+ P IY L+
Sbjct: 274 TYSIMVDILCKAGRVDEA-----LGIVRSMDPSICKPTTFIYSVLVHT------------ 316
Query: 364 VKSFSMRGLVNEAARAHDTMLE---GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
G N A DT LE K D AV+N LI C+ + Y + EM
Sbjct: 317 ------YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSC 457
G + S +L L + G +E V + ++ C
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC 407
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D TY +IK C + +E + + M +KG+ P ++ +I G C R KA
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRR 125
EM + GI P T+ L Q L + R
Sbjct: 468 LLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 36 IQQDLATYNKIIK---QHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ D+ +Y +++ Q + RV++ + R M ++G PD ++Y +I C +
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDE---VNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A F EM+Q+ P + SLI L S+++L++A F+ S P + T+ L+
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C A+ +M KGV P TY+ I+H L + R +EA + +
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGV--------GPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M P +Y I++ FC L A + +W DE+ ++ G+
Sbjct: 397 T---MSCEPTVSTYEIMVRMFCNKERLDMAIK---------IW--DEMKGKGVLPGMH-- 440
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
++SLI A C + +L + +EM G P
Sbjct: 441 -MFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 31/295 (10%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+ I +++ ++V++ +G M E G ++ + ++ +R G A + +M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+K PD +Y+ L++ + L + +EM PD + + +++A C ++
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A ++M + P SP +F ++I+GL ++ +AL G
Sbjct: 284 EEAIRFFNEMEQRNCKP------SPHIFC--SLINGLGSEKKLNDALEFFERSKSSGFPL 335
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM--------------- 263
+A +Y ++ +C ++ + AY+ EM K V G + TY ++
Sbjct: 336 EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV-GPNARTYDIILHHLIRMQRSKEAYEV 394
Query: 264 -QGLSDE---DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Q +S E TY ++ +C + L + + DEM KG LP + S LI L
Sbjct: 395 YQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 43/250 (17%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP-------------------D 74
E + D+ Y II HC ++ E+ + M ++ P D
Sbjct: 261 EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLND 320
Query: 75 AL----------------SYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
AL +Y ++ +C ++ AY+ EM KG+ P+A TY ++
Sbjct: 321 ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH 380
Query: 119 ALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
L +R EAY ++Q M P T+ ++ C + A + +M KGVL
Sbjct: 381 HLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL---- 436
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
P + ++++I LC +++EA M ++G+ P + + K
Sbjct: 437 ----PGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDK 492
Query: 239 AYELKVEMDR 248
+L V+MDR
Sbjct: 493 VTDLVVKMDR 502
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 137/363 (37%), Gaps = 50/363 (13%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP--DDITFTTLMHACCL 154
FK +QKG Y++LI++L ++ + L +M + TF +
Sbjct: 115 FKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYAR 174
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
+ +A H+M +F GF +N ++ L V +A + M +
Sbjct: 175 ARKVKEAIGAFHKM------EEF--GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
PD SY I++ G+ Q L + E+ EM + G + D Y
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE---GFE-----------PDVVAYGI 272
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
+INA+C + + + +EM + P I LINGL + + D +
Sbjct: 273 IINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 332
Query: 335 MYTSMPNYIIYDTLI-ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG------- 386
P Y + L+ C + + V ++G V AR +D +L
Sbjct: 333 FPLEAPTY---NALVGAYCWSQRMEDAYKTVDEMRLKG-VGPNARTYDIILHHLIRMQRS 388
Query: 387 ----------NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS--HMFSVLALL 434
+ +P + Y +++ C + + A ++ EM G + HMFS +L+
Sbjct: 389 KEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS--SLI 446
Query: 435 TAL 437
TAL
Sbjct: 447 TAL 449
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY ++ ++ +V++ VG+ E G+ D +++ ++ C K EF +
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRY----KHVEFAETL 235
Query: 102 ---DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
++ D + ++ C + EA ++++++ PD +++ T+++A +
Sbjct: 236 FCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKK 295
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ KA ++ M + T +P + N +I LCF R+ EAL + R + E G
Sbjct: 296 GKLGKAMELYRAM--------WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKG 347
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK-VVWGLDEVTYAYLM---QGLSD--- 268
P+ V+Y ++ C+ R K +EL EM+ K ++VT++YL+ Q D
Sbjct: 348 PDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI 407
Query: 269 -------------EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
D Y + Y + KV + EM G PD ++ I+GL
Sbjct: 408 VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLH 467
Query: 316 KKAR 319
K +
Sbjct: 468 TKGK 471
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 27/287 (9%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ N I+ C++ V + + + PD +SY +I GKA E
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
M PD +++I ALC K+R+ EA +F+E+ P+ +T+ +L+ C
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
K + + +M KG SP T++ + L + R ++ +L M +
Sbjct: 366 RRTEKVWELVEEMELKG------GSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNK 416
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+ Y ++ + Q + K E+ EM+R + G D+ TY + GL
Sbjct: 417 CEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL-GPDQRTYTIRIHGLH-------- 467
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+G++ + L+ EM KG +P+ + +L+N K R +D
Sbjct: 468 -----TKGKIGEALSYFQEMMSKGMVPEPRTE-MLLNQNKTKPRVED 508
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 76/348 (21%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
++D TY +I+ + + ++ VG+ M +GL+ + + Y ++ + KA +
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRL------------------------------ 126
M + G P+ +TYS L+ L ++ +L
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 127 --SEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-- 179
SEA+ LF +M S P + ++ +++ + C G+ +A M ++ KGV+ D +
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 180 -------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G SP +FTYN +I +G V+EA+ I +
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
PD +SY +I+ +N ++ +A+ EM K GL+ D TY++
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK---GLN-----------PDVVTYST 552
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
L+ + + +L +EM KG P+ V ++L++ L+K RT +
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ + +Y +++ C + + + +L + EKG+ D + Y V + + +
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ +M + G PD FTY+ LI + + EA ++F+E+ PD I++ +L++
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPAL 185
G+ +A +M KG+ PD VT G P +
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
TYN ++ L GR EA+ + M + GL+PD+++Y ++
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 177/422 (41%), Gaps = 51/422 (12%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
LR + + L ++ +Y+ ++ + +R KA++ E+ + G D F Y+ L+ AL
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 123 KRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ + + ++ D+ T+T ++ G+ +A + ++MI +G+ + V
Sbjct: 251 DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV---- 306
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
YN ++ L V++A+ + M E G P+ +Y ++++ +L + +
Sbjct: 307 ----GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV 362
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLS----------------------DEDTYASLINAYC 280
VE+ ++ + + Y+YL++ LS + D+Y S++ + C
Sbjct: 363 -VEISKRY---MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL----------------DKKARTKDTK 324
G+ + + + ++ KG + D+++ + + + L K + D
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478
Query: 325 AHLLLIIADYMYTSMPNYI-IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
+ +LI + + I I++ L + + S L+ G V+EA M
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMY 443
E PD Y+ L+ + V AY+++ EM+ G ++ + LL L +G
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
Query: 444 NE 445
E
Sbjct: 599 AE 600
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 27/280 (9%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+AT+ ++K +EK + I MA KG D + Y Y++ G N +
Sbjct: 201 IATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQ 260
Query: 100 EMDQK--GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLE-- 155
E+ +K G + D Y L++ K EA ++E + + + + + LE
Sbjct: 261 ELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEAL 320
Query: 156 ---GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G+F +A + + + P + + L T+N +++G C G+ EEA+ + R M
Sbjct: 321 SENGKFDEALKLFDAVKKEHNPPRHL---AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG 377
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM-----QGLS 267
+ SPD +S+ +++ C N L +A +L EM+ K V DE TY LM +G
Sbjct: 378 DFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP-DEYTYGLLMDTCFKEGKI 436
Query: 268 DEDT--YASLINAYCA---------QGELFKVLTLDDEMS 296
DE Y +++ + Q +L K LDD S
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKS 476
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L T+N ++ +C + E+ + + R M + SPD LS+ ++ C+N +A +
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM++K + PD +TY L+ + ++ E ++ M+ P+ + L
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ A M+ K + D Y I+ L GR++E L I+ M
Sbjct: 469 GKLDDAKSFFDMMVSKLKMDD---------EAYKFIMRALSEAGRLDEMLKIVDEM---- 515
Query: 216 LSPDAVSYIIVISGFCQNRELRKA 239
L D V + F + ELRK
Sbjct: 516 LDDDTVRVSEELQEFVK-EELRKG 538
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 146/350 (41%), Gaps = 65/350 (18%)
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYE-FKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ G++P+ ++Y + + + R P A E +KL +D + P T+ L++ L S L
Sbjct: 158 QAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNL 217
Query: 127 SEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A + ++M D + ++ LM C + ++ ++ K + GF
Sbjct: 218 EKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEK------LGGFVD 271
Query: 184 ALFTYNAIIHGLCFLGRVE--------EALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
Y ++ G F+ +E EA+G + A++Y V+ +N +
Sbjct: 272 DGVVYGQLMKGY-FMKEMEKEAMECYEEAVG-----ENSKVRMSAMAYNYVLEALSENGK 325
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
+A +L + + + +L L T+ ++N YCA G+ + + + +M
Sbjct: 326 FDEALKLFDAVKK------EHNPPRHLAVNLG---TFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 296 SHKGSLPDSVIDSLLINGL-DKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTL 348
PD++ + L+N L D + LL A+ +Y M P+ Y L
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNE----------LLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 349 IENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
++ C FK G ++E A + TM+E N +P+ AVYN L
Sbjct: 427 MDTC----FKE-----------GKIDEGAAYYKTMVESNLRPNLAVYNRL 461
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
LS LS ++ + N PGK I PD +Y++LI+ALC K L EA
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKL----------SIKPDIVSYNTLIKALCEKDSLPEAV 200
Query: 131 HLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
L E+ + PD +TF TL+ + L+G+F + +M+ K V D + T
Sbjct: 201 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID--------IRT 252
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YNA + GL + +E + + + GL PD S+ +I G + +MD
Sbjct: 253 YNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN----------EGKMD 302
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
W + V + Y D+ T+A L+ A C G+ + L E K L
Sbjct: 303 EAEAWYKEIVKHGYR----PDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 308 SLLINGLDKKARTKDTK 324
L++ L K ++ ++ +
Sbjct: 359 QQLVDELVKGSKREEAE 375
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 7 SFTATLKTFRHMVRNGVVCR-FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
SF A L +R + VV F SI+ D+ +YN +IK C + + V +L
Sbjct: 146 SFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE 205
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGK---AYEFKLEMDQKGILPDAFTYSSLIQALCS 122
+ KGL PD +++ T ++ G+ E +M +K + D TY++ + L +
Sbjct: 206 IENKGLKPDIVTFN---TLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLAN 262
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
+ + E +LF E+ + PD +F ++ EG+ +A + +++ G PD
Sbjct: 263 EAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA- 321
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILR 209
T+ ++ +C G E A+ + +
Sbjct: 322 -------TFALLLPAMCKAGDFESAIELFK 344
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 135/343 (39%), Gaps = 63/343 (18%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNK------------IIKQHCLMQR 55
F + + VR R AA+ E +++ L NK II + +
Sbjct: 67 FRKNIAVYERTVR-----RLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGM 121
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR-----------CPGKAYEFKLEMDQK 104
E + M E+ ALS+ ++ N++ PGK
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL---------- 171
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKA 161
I PD +Y++LI+ LC K +EA L E+ + PD ITF L+H +G+F +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
+ +M+ K V D + +YNA + GL + EE + + + L PD
Sbjct: 232 EQIWARMVEKNVKRD--------IRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVF 283
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCA 281
++ +I GF +L +A E+++ L V + SL+ A C
Sbjct: 284 TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV--------------FNSLLPAICK 329
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
G+L L E+ K L D + +++ L K ++ + +
Sbjct: 330 AGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAE 372
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 124/316 (39%), Gaps = 51/316 (16%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----------------PPDDI 143
++ +GI T ++LI + +R S Y +++E+ P+
Sbjct: 187 KLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNAT 246
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TF ++M + EGE + +M + G SP +++YN ++ C G + E
Sbjct: 247 TFNSMMVSFYREGETEMVERIWREMEEE-------VGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A + M G+ D V+Y +I G C N E+ KA EL +M GL + L
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM------GLKGIECTCL- 352
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
TY L+N YC G++ L + EM KG D + L+ GL D
Sbjct: 353 -------TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL-----CDDR 400
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
++ AD + ++ + Y + NC LVK G ++ A M
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPS--RNCYEL-------LVKRLCEDGKMDRALNIQAEM 451
Query: 384 LEGNYKPDGAVYNLLI 399
+ +KP Y I
Sbjct: 452 VGKGFKPSQETYRAFI 467
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 20/251 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK-GLSPDALSYRYVITGFCNNRCPGKA 94
I+ + T+N ++ E I R M E+ G SP+ SY ++ +C +A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD---ITFTTLMHA 151
+ EM +G++ D Y+++I LCS + +A LF++M + +T+ L++
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC---FLGRVEEALGIL 208
C G+ ++ +M K GF T A++ GLC RV EA I+
Sbjct: 361 YCKAGDVDSGLVVYREMKRK--------GFEADGLTIEALVEGLCDDRDGQRVVEAADIV 412
Query: 209 R-GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-- 265
+ + E P Y +++ C++ ++ +A ++ EM K E TY + G
Sbjct: 413 KDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE-TYRAFIDGYG 471
Query: 266 -LSDEDTYASL 275
+ DE+T A L
Sbjct: 472 IVGDEETSALL 482
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ +Y +I+ C +E + M + GL PDA Y +ITGF + YE
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM +KG PD TY++LI+ + +++ A ++ +M+ P TF +M + +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+ + +MI KG+ PD +Y +I GL G+ EA L M + G
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDN--------SYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Query: 216 LSPDAVSY 223
+ + Y
Sbjct: 539 MKTPLIDY 546
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 22/255 (8%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCR----FTAARN-----SESIQQDLATYNKIIKQHCLMQ 54
L++ FT + T+ ++ NG CR AAR + ++ D+ +N +++ +
Sbjct: 290 LKERFTPNMMTYTVLL-NGW-CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+ + + M KG P+ SY +I FC A E+ +M G+ PDA Y+
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
LI ++++L Y L +EM PPD T+ L+ + A ++++MI
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
+ P++ T+N I+ E + M + G+ PD SY ++I G
Sbjct: 468 EI--------EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Query: 232 QNRELRKAYELKVEM 246
+ R+A EM
Sbjct: 520 GEGKSREACRYLEEM 534
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 157/412 (38%), Gaps = 66/412 (16%)
Query: 1 MKLLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGV 60
+ L D L+ FRH R F A + D TYN ++ ++ E V
Sbjct: 157 LDLSHDLIVEVLERFRH-ARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 215
Query: 61 GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA---------YEFKLEMDQKGILPDAF 111
+L M KGL ++ + F + KA Y+FK+ ++
Sbjct: 216 SVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE--------- 265
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
T + L+ +L + EA LF ++ P+ +T+T L++ C +A + + MI
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+G+ PD V +N ++ GL + +A+ + M G P+ SY I+I
Sbjct: 326 DQGLKPDIV--------AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
FC+ + A E D V GL D Y LI + Q +L V
Sbjct: 378 FCKQSSMETAIEY---FDDMVDSGLQ-----------PDAAVYTCLITGFGTQKKLDTVY 423
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI--IYDT 347
L EM KG PD T L+ ++A+ MP + IY+
Sbjct: 424 ELLKEMQEKGHPPDG-----------------KTYNALIKLMAN---QKMPEHATRIYNK 463
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
+I+N + ++KS+ M + M++ PD Y +LI
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 152/393 (38%), Gaps = 61/393 (15%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP 140
V+ F + R P + F +++G D+ TY+S++ L R+ + +EM +
Sbjct: 167 VLERFRHARKPAFRF-FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG 225
Query: 141 --DDITFTTLMHACCLEGEFSKA-----------FHMHHQMIH---------------KG 172
TFT M A E KA F + + I+ +
Sbjct: 226 LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV 285
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+ F+P + TY +++G C + + EA I M + GL PD V++ +++ G +
Sbjct: 286 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR 345
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
+R+ A +L M K + +Y +I +C Q + +
Sbjct: 346 SRKKSDAIKLFHVMKSK--------------GPCPNVRSYTIMIRDFCKQSSMETAIEYF 391
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC 352
D+M G PD+ + + LI G + + DT LL + + + P+ Y+ LI+
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHP--PDGKTYNALIKLM 448
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
+N + + A R ++ M++ +P +N+++ + N
Sbjct: 449 ANQK---------------MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGR 493
Query: 413 NMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
++ EM++ G S L+ L G E
Sbjct: 494 AVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 29/277 (10%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
+P+ ++Y ++ G+C R +A +M +G+ PD ++ +++ L R+ S+A
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 131 HLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
LF M S P+ ++T ++ C + A M+ G+ PD
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA--------V 405
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
Y +I G +++ +L+ M E G PD +Y +I + A +
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI----- 460
Query: 248 RKVVWGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
Y ++Q + T+ ++ +Y + +EM KG PD
Sbjct: 461 -----------YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDN 509
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
++LI GL + ++++ +L ++ M T + +Y
Sbjct: 510 SYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDY 546
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE-KGLSPDALSYRYVITGFCNNRCPG 92
E I+ D YN ++ V + +++ M E KG+ P+ ++Y +I C R
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A + EM +KG+ P TY + ++ L + + E ++M P T+ L+
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C +F + +M K V PD L +Y +IHGL G++EEA G + M
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPD--------LSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 213 EMGLSPDAVSYIIVISGF 230
+ G+ P+ ++ S F
Sbjct: 503 DKGMRPNENVEDMIQSWF 520
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 34/305 (11%)
Query: 32 NSESIQQDLATYNKIIKQHC-LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
N + D ++N ++ C ++ + + M G+ D +SY +I+ +
Sbjct: 258 NKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGS 317
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFT 146
K + M ++ I PD Y++++ AL +SEA +L + M P+ +T+
Sbjct: 318 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYN 377
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
+L+ C + +A + +M+ KG+ P + TY+A + L EE
Sbjct: 378 SLIKPLCKARKTEEAKQVFDEMLEKGLFP--------TIRTYHAFMR---ILRTGEEVFE 426
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+L M +MG P +YI++I C+ R+ L EM K V G D +Y ++ GL
Sbjct: 427 LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV-GPDLSSYIVMIHGL 485
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK----ARTKD 322
+N G++ + EM KG P+ ++ ++ + K R D
Sbjct: 486 --------FLN-----GKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITD 532
Query: 323 TKAHL 327
+K +
Sbjct: 533 SKGEV 537
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 42 TYNKIIKQHCLMQR--VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+YN +IK CL Q +E ++ + E PD +Y V+ C A+
Sbjct: 514 SYNSVIK--CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
M++ G+ P YSS+I +L + R+ EA F +ML PD+I + +++ G
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+A + +++ + P+ FTY +I G +G +E+ L M E GL
Sbjct: 632 RIDEANELVEEVVKHFL--------RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
SP+ V Y +I F + + + ++ L M + D + Y L+ GL
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH-DHIAYITLLSGL 732
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 48/404 (11%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+L +A K + A+ V T C+ R A +M G P F+Y+S+I+ L
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLF 523
Query: 122 SK---RRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
+ L+ ++ QE+ PD T+ +++ C + + AF + M
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE-------- 575
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G P + Y++II L GRV EA M E G+ PD ++Y+I+I+ + +N + +
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A EL ++EV +L TY LI+ + G + K D+M
Sbjct: 636 ANEL-----------VEEVVKHFLR---PSSFTYTVLISGFVKMGMMEKGCQYLDKMLED 681
Query: 299 GSLPDSVIDSLLINGLDKKARTK----------------DTKAHLLLIIADYMYTSMPNY 342
G P+ V+ + LI KK K D A++ L+ ++ +M
Sbjct: 682 GLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG--LWRAMARK 739
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSM-RGLVNEAARAHDTMLEGNYK----PDGAVYNL 397
++E + ++ S+ L N +++ + G K P+ ++N
Sbjct: 740 KKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNT 799
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+I +C + +AYN M + G V ++ + L+ + + G
Sbjct: 800 IITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 196/518 (37%), Gaps = 114/518 (22%)
Query: 27 FTAARNSESIQQD-LATYNKIIKQ-HCLMQRVEKGVGI--------LRGMAEKGLSPDAL 76
+ +RNS S+ D L ++ ++ HC Q E+G G+ +G+ G +A+
Sbjct: 162 YAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAI 221
Query: 77 S-----------------YRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
Y+ + FC C +A M+ G D Y+ L++
Sbjct: 222 GMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKE 281
Query: 120 LCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
C ++ A L+ M+ D F TL+H G K M QMI KGV +
Sbjct: 282 YCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSN 341
Query: 177 FVT--------------GFSPALFT--------------YNAIIHGLCFLGRVEEALGIL 208
T ++ LF Y +I G G +++A+ +L
Sbjct: 342 VFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLL 401
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-------------DRKVV--WG 253
M + G+ PD ++Y +++ + L K +ELK M + V+ G
Sbjct: 402 MRMLDNGIVPDHITYFVLL------KMLPKCHELKYAMVILQSILDNGCGINPPVIDDLG 455
Query: 254 LDEVTYAYLMQGLSDEDT------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
EV L+ ++ +D A + A C+Q L+ ++M + G P
Sbjct: 456 NIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSY 515
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI-ENCSNNE---------- 356
+ +I L ++ +D A L+ II + + +P+ Y ++ E C N+
Sbjct: 516 NSVIKCLFQENIIEDL-ASLVNIIQELDF--VPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 357 ------------FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+ S++G S +G V EA MLE +PD Y ++I + R
Sbjct: 573 MEELGLRPTVAIYSSIIG---SLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
+ +A + E+V++ F+ L++ GM
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
G +K + P+ + +ITG+C +AY M ++GI+P+ TY+ L+++
Sbjct: 784 GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 125 RLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
+ A LF+ PD + ++TL+ C +F + M+ +G +P
Sbjct: 844 DIESAIDLFEGTNCEPDQVMYSTLLKGLC---DFKRPLDALALMLEMQ-----KSGINPN 895
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+Y ++ LC+ EA+ +++ M + + P ++++ +I C+ ++LR+A L
Sbjct: 896 KDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARAL 953
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E I +L TY ++K H +E + + G PD + Y ++ G C+ + P
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLD 879
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A LEM + GI P+ +Y L+Q LC R EA + ++M + P I T L++
Sbjct: 880 ALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIY 939
Query: 151 ACCLEGEFSKAFHMHHQMIHKG 172
C E + +A + M+ G
Sbjct: 940 ILCEEKKLREARALFAIMVQSG 961
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 170/450 (37%), Gaps = 112/450 (24%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC-------- 86
S + D +N +I + ++KG + M +KG+ + +Y +I +C
Sbjct: 302 SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 87 ---------------NNRC-------------PGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
N C KA + + M GI+PD TY L++
Sbjct: 362 LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLK 421
Query: 119 ALCSKRRLSEAYHLFQEML------SPP--DD------------------------ITFT 146
L L A + Q +L +PP DD +
Sbjct: 422 MLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLA 481
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
+ A C + + A +M++ G +P F+YN++I L +E+
Sbjct: 482 VVTTALCSQRNYIAALSRIEKMVN--------LGCTPLPFSYNSVIKCLFQENIIEDLAS 533
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR-----------KVVWGLD 255
++ + E+ PD +Y+IV++ C+ + A+ + M+ ++ L
Sbjct: 534 LVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 256 --------EVTYAYLMQ-GLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
E T+A +++ G+ DE Y +IN Y G + + L +E+ P S
Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLV 364
++LI+G K + +L ++ D + PN ++Y LI + +FK
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLS---PNVVLYTALIGHFLKKGDFKF----- 705
Query: 365 KSFSMRGLVNEAARAHD-----TMLEGNYK 389
SF++ GL+ E HD T+L G ++
Sbjct: 706 -SFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 144/378 (38%), Gaps = 48/378 (12%)
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEF-KLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ G+ D+ Y +I PG A F + GI+PD+ S++ L RR
Sbjct: 87 VDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRR 146
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
EA +++ P + + ++ C + F +AFH Q+ +G +G
Sbjct: 147 FDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERG------SGL- 199
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS-YIIVISGFCQNRELRKAYE 241
L+ + GLC G + EA+G+L + M P V+ Y + FC+ +A
Sbjct: 200 -WLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEA 258
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
L M EV Y+ D+ Y L+ YC + + L M +
Sbjct: 259 LFDHM---------EVDGYYV-----DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV 361
D I + LI+G K + +I + +++ Y I
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHI----------------- 347
Query: 362 GLVKSFSMRGLVNEAAR--AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
++ S+ G V+ A R ++T E + + Y LIF ++ + KA ++ M M+
Sbjct: 348 -MIGSYCKEGNVDYALRLFVNNTGSE-DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRML 405
Query: 420 RYGFVSHMFSVLALLTAL 437
G V + LL L
Sbjct: 406 DNGIVPDHITYFVLLKML 423
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 33/247 (13%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP 140
++ G+ GK E+ +MD +G+ D F+YS + +C + +A L++EM S
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 141 ---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
D + + T++ A + +M +G P+ T +N II LC
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVAT--------HNTIIKLLCE 306
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
GR+ +A +L MP+ G PD+++Y+ + S L K E+ R + G+
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCLFS------RLEKPSEILSLFGRMIRSGVR-- 358
Query: 258 TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS-----VIDSLLIN 312
DTY L+ + G L VL + M G PDS VID+L+
Sbjct: 359 ---------PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 313 GLDKKAR 319
G+ AR
Sbjct: 410 GMLDMAR 416
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 14/190 (7%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
S ++ D+ YN +I+ Q VE G+ + R M E+G P+ ++ +I C +
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
AY EM ++G PD+ TY L L + SE LF M+ P T+ L
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
M G ++ M G PD YNA+I L G ++ A
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSA--------AYNAVIDALIQKGMLDMAREYE 419
Query: 209 RGMPEMGLSP 218
M E GLSP
Sbjct: 420 EEMIERGLSP 429
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 128/342 (37%), Gaps = 64/342 (18%)
Query: 92 GKAYEFKLE-------MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDD 142
GK +EF++ + +P+ T+ + + + + EA + ++ + D+
Sbjct: 92 GKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDE 151
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA-LFTYNAIIHGLCFLGRV 201
+F L+ A C E K V+ + GFS + +N I+ G LG
Sbjct: 152 TSFYNLVDALC---EHKHVVEAEELCFGKNVIGN---GFSVSNTKIHNLILRGWSKLGWW 205
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
+ + M G++ D SY I + C++ + KA +L EM + + LD V Y
Sbjct: 206 GKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRM-KLDVVAYNT 264
Query: 262 LMQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKG 299
+++ + T+ ++I C G + + DEM +G
Sbjct: 265 VIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG 324
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII--YDTLIENCSNNEF 357
PDS+ L + L+K P+ I+ + +I + +
Sbjct: 325 CQPDSITYMCLFSRLEK-----------------------PSEILSLFGRMIRSGVRPKM 361
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
+ V L++ F G + TM E PD A YN +I
Sbjct: 362 DTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVI 403
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
++K + + G+ P+ SY ++ FC N AY+ +M ++ ++PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 116 LIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LIQ C K +++ A L +ML+ PD TL+ C +G F + +MI K
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISK- 285
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
GFSP N ++ G C G+VEEA ++ + + G + + ++ +VI C
Sbjct: 286 -------GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
Query: 233 NRELRK 238
E K
Sbjct: 339 EDESEK 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC-PGKAYEFKLEM 101
+ +IK + + EK + M E +P ++ ++R KA+E
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
G++P+ +Y+ L+QA C LS AY LF +ML PD ++ L+ C +G+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+ A + M++KG +PD +I GLC G +E L M G SP
Sbjct: 242 NGAMELLDDMLNKGFVPD------------RTLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
++ GFC ++ +A ++ VE+ K L T+ ++ + +ED
Sbjct: 290 HFSVSNCLVKGFCSFGKVEEACDV-VEVVMKNGETLHSDTWEMVIPLICNED 340
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 39/198 (19%)
Query: 181 FSPALFTYNAIIHGLC-FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
F+P N I+ L G +++A + + G+ P+ SY +++ FC N +L A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 240 YELKVEM-DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
Y+L +M +R VV D D+Y LI +C +G++ + L D+M +K
Sbjct: 210 YQLFGKMLERDVV---------------PDVDSYKILIQGFCRKGQVNGAMELLDDMLNK 254
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
G +PD LI GL + + K +L +I+ P++ + NC
Sbjct: 255 GFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFS---PHFS-----VSNC------ 296
Query: 359 SVVGLVKSFSMRGLVNEA 376
LVK F G V EA
Sbjct: 297 ----LVKGFCSFGKVEEA 310
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 66/265 (24%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGF---CNNRCPGKAYEFKLEMDQKGILPDAFT 112
+EK G + L P+++S+ +I GF C+ K ++ LEM+ + P T
Sbjct: 167 LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME---VQPSVVT 223
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
Y+SLI LC + +A L ++M+ P+ +TF LM C +GE+++A + M
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
++ G P L Y ++ L GR++EA +L M + + PD V Y I+++
Sbjct: 284 YR--------GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
C C E ++VL
Sbjct: 336 LCTE----------------------------------------------CRVPEAYRVL 349
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGL 314
T EM KG P++ ++I+G
Sbjct: 350 T---EMQMKGCKPNAATYRMMIDGF 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 17/239 (7%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
SF +K F C+ +Q + TYN +I C + K +L M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFK---LEMDQKGILPDAFTYSSLIQALCSK 123
+K + P+A+++ ++ G C C G+ E K +M+ +G P Y L+ L +
Sbjct: 248 IKKRIRPNAVTFGLLMKGLC---CKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
R+ EA L EM PD + + L++ C E +A+ + +M KG P+
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA-- 362
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TY +I G C + + L +L M P +++ +++G + L A
Sbjct: 363 ------TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 133/341 (39%), Gaps = 55/341 (16%)
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR---LSEAYHLFQEMLSPPDDITFTT 147
P +A + + G D +YSSLI L R + + L + + F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS--PALFTYNAIIHGLCFLGRVEEAL 205
L+ G KA + H+ +T F + + N +I+ L G +E+A
Sbjct: 122 LIQHYGKAGSVDKAIDVFHK----------ITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 206 GILRGMPEMGLSPDAVSYIIVISGF---CQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
G +M L P++VS+ I+I GF C K ++ +EM EV + +
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEM---------EVQPSVV 222
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY SLI C ++ K +L ++M K P++V LL+ GL K +
Sbjct: 223 --------TYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 323 TKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
K ++ D Y P + Y L+ + RG ++EA
Sbjct: 275 AKK----LMFDMEYRGCKPGLVNYGILMSD---------------LGKRGRIDEAKLLLG 315
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
M + KPD +YN+L+ C V +AY + EM G
Sbjct: 316 EMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P ++N +I G E A + M EM + P V+Y +I C+N ++ KA L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+M +K + + VT+ LM+GL C +GE + L +M ++G P
Sbjct: 244 LEDMIKKRIRP-NAVTFGLLMKGL-------------CCKGEYNEAKKLMFDMEYRGCKP 289
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
V +L++ L K+ R + K LL+ P+ +IY+ L+ +
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAK---LLLGEMKKRRIKPDVVIYNILVNH----------- 335
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
V EA R M KP+ A Y ++I CR + N+ M+
Sbjct: 336 ----LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML 388
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
EM Q+G++ + TY++LIQ L A +F+EM+S PPD +T+ L+ C G
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 157 EFSKA---------FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
+ KA + + + KGV P+ VT Y +I G C G EEA +
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVT--------YTTMISGFCKKGFKEEAYTL 117
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
R M E G PD+ +Y +I ++ + + EL EM R + D TY + L
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDMLH 176
Query: 268 D 268
D
Sbjct: 177 D 177
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 33 SESIQQDLATYNKIIKQHC---------LMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
S+ + D+ TYN ++ C + +VE G + ++ KG+ P+ ++Y +I+
Sbjct: 44 SDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMIS 103
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
GFC +AY +M + G LPD+ TY++LI+A + + L +EM S
Sbjct: 104 GFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ +M +G++ + VT Y +I GL G + A I + M G+ PD ++
Sbjct: 2 ELFREMSQRGLVGNTVT--------YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMT 53
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y I++ G C+N +L KA + KV G D L + TY ++I+ +C +
Sbjct: 54 YNILLDGLCKNGKLEKAL-----VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKK 108
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
G + TL +M G LPDS + LI
Sbjct: 109 GFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 152/401 (37%), Gaps = 70/401 (17%)
Query: 1 MKLLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGV 60
+ L D L+ FRH R F A + D TYN ++ ++ E V
Sbjct: 156 LDLSHDLIVEVLERFRH-ARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 214
Query: 61 GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA---------YEFKLEMD--------- 102
+L M KGL ++ + F + KA Y+FK+ ++
Sbjct: 215 SVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL 273
Query: 103 ----------------QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
++ P+ TY+ L+ C R L EA ++ +M+ PD +
Sbjct: 274 GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 333
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
++ + S A + H M KG P+ + +Y +I C +E
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMET 385
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A+ M + GL PDA Y +I+GF ++L YEL EM K D TY L+
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALI 444
Query: 264 QGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
+ ++++ T+ ++ +Y + DEM KG
Sbjct: 445 KLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 504
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
PD ++LI GL + ++++ +L ++ M T + +Y
Sbjct: 505 PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDY 545
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 153/396 (38%), Gaps = 67/396 (16%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP 140
V+ F + R P + F +++G D+ TY+S++ L R+ + +EM +
Sbjct: 166 VLERFRHARKPAFRF-FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG 224
Query: 141 --DDITFTTLMHACCLEGEFSKA-----------FHMHHQMIH---------------KG 172
TFT M A E KA F + + I+ +
Sbjct: 225 LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV 284
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+ F+P + TY +++G C + + EA I M + GL PD V++ +++ G
Sbjct: 285 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL- 343
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG---LSDEDTYASLINAYCAQGELFKVL 289
R ++K+ D + ++M+ + +Y +I +C Q + +
Sbjct: 344 -RSMKKS---------------DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 387
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
D+M G PD+ + + LI G + + DT LL + + + P+ Y+ LI
Sbjct: 388 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHP--PDGKTYNALI 444
Query: 350 ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
+ +N + + R ++ M++ +P +N+++ + N
Sbjct: 445 KLMANQK---------------MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
++ EM++ G S L+ L G E
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 163/414 (39%), Gaps = 51/414 (12%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++TA +KT R + I+ D+ Y ++ C RVE+G + M
Sbjct: 300 AYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
K + D YR +I GF + A ++ G + D Y+++I+ LCS ++
Sbjct: 360 KGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV 419
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV-LPDFVTGF- 181
+AY LFQ + PD T + +M A + S ++ ++ G + D++T F
Sbjct: 420 DKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFF 479
Query: 182 ------------------------SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
++ YN ++ L +G ++++L + M ++G
Sbjct: 480 KLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFE 539
Query: 218 PDAVSYIIVISGFCQNRELRKA---YELKVEMD-----------RKVVWGLDEVTYAYLM 263
PD+ SY I I F + +++ A +E +EM K + + E+ L+
Sbjct: 540 PDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLL 599
Query: 264 --------QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
+ E YA + C KV+ + DEM+ +G + VI +I+G+
Sbjct: 600 VRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMS 659
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
K K + + + T + + LIE V+ +K F +
Sbjct: 660 KHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGL 713
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 116/298 (38%), Gaps = 39/298 (13%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG-------MAEKGLSPDALSYR 79
F A + + D A YN +CL + G R M +G P +
Sbjct: 145 FHWAGKQKGYKHDFAAYNAF--AYCLNRN-----GHFRAADQLPELMDSQGRPPSEKQFE 197
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA---YHLFQEM 136
+I +NR + Y +M + G P F Y+ ++ AL A Y F+E
Sbjct: 198 ILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKED 257
Query: 137 LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
+ TF L+ C G + + +M PD +F Y A+I L
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD--------VFAYTAMIKTLV 309
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G ++ +L + M + PD ++Y ++ G C++ + + YEL +EM K
Sbjct: 310 SEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK------- 362
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Q L D + Y LI + A G++ L +++ G + D I + +I GL
Sbjct: 363 -------QILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 160/411 (38%), Gaps = 49/411 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ Y +IK ++ + + M + PD ++Y ++ G C + + YE
Sbjct: 295 KPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYE 354
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
+EM K IL D Y LI+ + ++ A +L+++++ D + ++ C
Sbjct: 355 LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC 414
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ KA+ + I + + PDF T SP + Y +++ L V E +G L
Sbjct: 415 SVNQVDKAYKLFQVAIEEELEPDFET-LSPIMVAY-VVMNRLSDFSNVLERIGEL----- 467
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ + L + ++L + K LD V Y +G Y
Sbjct: 468 ---------------GYPVSDYLTQFFKLLCADEEKNAMALD-VFYILKTKGHGSVSVYN 511
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
L+ A G++ K L+L EM G PDS S+ I +K K + II
Sbjct: 512 ILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE- 570
Query: 334 YMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK--P 390
+ +P+ Y +L + C E +V+ LV+ GN + P
Sbjct: 571 --MSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE-----------------CLGNVESGP 611
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
Y L + C+ N K + EM + G + A+++ + HG
Sbjct: 612 MEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ +Y +I+ C +E + M + GL PDA Y +ITGF + YE
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM +KG PD TY++LI+ + +++ ++ +M+ P TF +M + +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+ + +MI KG+ PD +Y +I GL G+ EA L M + G
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDN--------SYTVLIRGLISEGKSREACRYLEEMLDKG 538
Query: 216 LSPDAVSY 223
+ + Y
Sbjct: 539 MKTPLIDY 546
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 22/255 (8%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCR----FTAARN-----SESIQQDLATYNKIIKQHCLMQ 54
L++ FT + T+ ++ NG CR AAR ++ D+ +N +++
Sbjct: 290 LKERFTPNMMTYTVLL-NGW-CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+ + + M KG P+ SY +I FC A E+ +M G+ PDA Y+
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
LI ++++L Y L +EM PPD T+ L+ + ++++MI
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
+ P++ T+N I+ E + M + G+ PD SY ++I G
Sbjct: 468 EI--------EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Query: 232 QNRELRKAYELKVEM 246
+ R+A EM
Sbjct: 520 SEGKSREACRYLEEM 534
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 164/432 (37%), Gaps = 61/432 (14%)
Query: 1 MKLLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGV 60
+ L D L+ FRH R F A + TYN ++ ++ E V
Sbjct: 157 LDLSHDLIVEVLERFRH-ARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMV 215
Query: 61 GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA---------YEFKLEMDQKGILPDAF 111
+L M KGL ++ + F + KA Y+FK+ ++
Sbjct: 216 SVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE--------- 265
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
T + L+ +L + EA LF ++ P+ +T+T L++ C +A + + MI
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
G+ PD V +N ++ GL + +A+ + M G P+ SY I+I
Sbjct: 326 DHGLKPDIVA--------HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
FC+ + A E D V GL D Y LI + Q +L V
Sbjct: 378 FCKQSSMETAIEY---FDDMVDSGLQ-----------PDAAVYTCLITGFGTQKKLDTVY 423
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGL-DKKARTKDTKAHLLLI---IADYMYT---SMPNY 342
L EM KG PD + LI + ++K T+ + +I I ++T M +Y
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 343 II----------YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ +D +I+ + S L++ G EA R + ML+ K
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 543
Query: 393 AVYNLLIFDHCR 404
YN D R
Sbjct: 544 IDYNKFAADFHR 555
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 139/349 (39%), Gaps = 45/349 (12%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFS 159
EM KG+L T++ ++A + + +A +F+ M I T+ C L+
Sbjct: 220 EMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI--NCLLDSLGR 276
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
Q++ F+P + TY +++G C + + EA I M + GL PD
Sbjct: 277 AKLGKEAQVL----FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD 332
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG---LSDEDTYASLI 276
V++ +++ G R ++K+ D + ++M+ + +Y +I
Sbjct: 333 IVAHNVMLEGLL--RSMKKS---------------DAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+C Q + + D+M G PD+ + + LI G + + DT LL + + +
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGH 434
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
P+ Y+ LI+ +N + + R ++ M++ +P +N
Sbjct: 435 P--PDGKTYNALIKLMANQK---------------MPEHGTRIYNKMIQNEIEPSIHTFN 477
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+++ + N ++ EM++ G S L+ L G E
Sbjct: 478 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 51/303 (16%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF+ A TYN+++ L + E + +L M GL ++ I + F +E +KA
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 248
Query: 240 ---------YELKVEMDRKVVWGLDEVTYAYL---MQGLSDE---------DTYASLINA 278
Y+ K+ ++ + LD + A L Q L D+ TY L+N
Sbjct: 249 VGIFELMKKYKFKIGVE-TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
+C L + + ++M G PD V ++++ GL + + D + + M +
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA-----IKLFHVMKSK 362
Query: 339 MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
P C N +S +++ F + + A D M++ +PD AVY L
Sbjct: 363 GP-----------CPN--VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFV--SHMFSVLALLTA---LRDHG--MYNERSWVIQ 451
I + + Y + EM G ++ L L A + +HG +YN+ +IQ
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK---MIQ 466
Query: 452 NTL 454
N +
Sbjct: 467 NEI 469
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 119/290 (41%), Gaps = 36/290 (12%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+N +++ C + +++ I + + +PD + ++ GF F EM
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLMHACCLEGEFS 159
++G P++ TY I C KR EA LF++M DIT TTL+H +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
KA + ++ +G+ PD YNA++ L G V A+ +++ M E G+ PD
Sbjct: 298 KARQLFDEISKRGLTPD--------CGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD 349
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------TYA 273
+V++ + G +++E +G + V Y Q + + T
Sbjct: 350 SVTFHSMFIGMMKSKE----------------FGFNGVCEYY--QKMKERSLVPKTPTIV 391
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
L+ +C GE+ L L M KG P LL L + R D
Sbjct: 392 MLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDA 441
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 56/304 (18%)
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
F L+ A C E E +A + + + F+P + T N ++ G G V
Sbjct: 179 FNILLRAFCTEREMKEA---------RSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTAT 229
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR---------------- 248
M + G P++V+Y I I GFC+ R +A L +MDR
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG 289
Query: 249 --------KVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
K DE++ +GL+ D Y +L+++ G++ + + EM KG
Sbjct: 290 SGVARNKIKARQLFDEIS----KRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 300 SLPDSV-IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
PDSV S+ I + K ++ + + Y Y + E +
Sbjct: 346 IEPDSVTFHSMFIGMMKSK---------------EFGFNGVCEY--YQKMKERSLVPKTP 388
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
++V L+K F G VN MLE Y P G LL C R + A+ +
Sbjct: 389 TIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQT 448
Query: 419 VRYG 422
V G
Sbjct: 449 VERG 452
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 29/246 (11%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
PD + Y ++ G+C +A + EM GI P+ +TYS +I ALC ++S A+
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 131 HLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
+F +ML P+ ITF LM G K +++QM G PD + T
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI--------T 362
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YN +I C +E A+ +L M + +A ++ + + R++ A+ +
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM----- 417
Query: 248 RKVVWGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
Y+ +M+ + + TY L+ + VL + EM K P+
Sbjct: 418 -----------YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVN 466
Query: 306 IDSLLI 311
LL+
Sbjct: 467 TYRLLV 472
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 65/318 (20%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACCLEGEFSKAFHMHHQMI 169
Y+ +I R+ A+HL M S +I TFT L+ G S+A H ++M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 170 HKGVLPDFVT--------------------------GFSPALFTYNAIIHGLCFLGRVEE 203
G +PD + F P + Y ++ G C G + E
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A + + M G+ P+ +Y IVI C+ ++ +A+++ +M L
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM---------------LD 318
Query: 264 QGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
G + + T+ +L+ + G KVL + ++M G PD++ + LI +A +D
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI-----EAHCRD 373
Query: 323 TKAHLLLIIADYMYTSMPNYI-IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
++ N + + +T+I+ + + + + VN A R +
Sbjct: 374 --------------ENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 382 TMLEGNYKPDGAVYNLLI 399
M+E +P+ YN+L+
Sbjct: 420 KMMEAKCEPNTVTYNILM 437
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +++ H R EK + + M + G PD ++Y ++I C + A + M
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
+K +A T++++ + + KR ++ A+ ++ +M+ P+ +T+ LM
Sbjct: 387 IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKST 446
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM-PEMGLS 217
M +M K V P+ + TY ++ C +G A + + M E L+
Sbjct: 447 DMVLKMKKEMDDKEVEPN--------VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
P Y +V++ + +L+K EL +M +K
Sbjct: 499 PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 22/255 (8%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES---------IQQDLATYNKIIKQHCLMQ 54
L+D F + + ++VR CR +E I+ ++ TY+ +I C
Sbjct: 247 LKDRFEPDVIVYTNLVRGW--CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
++ + + M + G +P+A+++ ++ K + +M + G PD TY+
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACCLEGEFSKAFHMHHQMIHK 171
LI+A C L A + M+ ++ TF T+ + + + A M+ +M+
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
P+ V TYN ++ + L + + M + + P+ +Y ++++ FC
Sbjct: 425 KCEPNTV--------TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 232 QNRELRKAYELKVEM 246
AY+L EM
Sbjct: 477 GMGHWNNAYKLFKEM 491
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 39/177 (22%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK--------------------------- 69
+ D TYN +I+ HC + +E V +L M +K
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 70 --------GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
P+ ++Y ++ F ++ + K EMD K + P+ TY L+ C
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 122 SKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
+ AY LF+EM+ P + ++ G+ K + +MI KG++
Sbjct: 477 GMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 130/321 (40%), Gaps = 47/321 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ + YN ++ + +E+ G+ M +KGL P A +Y ++ + P
Sbjct: 375 IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVE 434
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLS----EAYHLFQEMLSPPDDITFTTLMHA 151
EM+ G+ P+ +Y+ LI A +++S +A+ +++ P ++T L+HA
Sbjct: 435 TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHA 494
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL-------------------------- 185
+ G KA+ +M +G+ P V ++ L
Sbjct: 495 YSVSGWHEKAYASFEEMCKEGIKPS-VETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 186 --FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
TYN ++ G G EA ++ +MGL P ++Y ++++ + + + K +L
Sbjct: 554 TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
EM + D TY+++I A+ + + M G +PD
Sbjct: 614 KEM--------------AALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Query: 304 SVIDSLLINGLDKKARTKDTK 324
L L+ KA+TK+ K
Sbjct: 660 PRSYEKLRAILEDKAKTKNRK 680
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 168/432 (38%), Gaps = 59/432 (13%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQAL- 120
+L + +K D Y I+G ++ A+E MD+ + PD T + LI L
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 121 CSKRRLSEAYHLFQEM----LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
+ R E + +F++M + D+ F L+ + C EG +A + +M KG+ +
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDV-FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSN 378
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE- 235
+ YN ++ +EE G+ M + GL P A +Y I++ + + +
Sbjct: 379 TI--------VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQP 430
Query: 236 ------LRKAYELKVEMDRKVVWGL-----------DEVTYAYLMQ---GLSDED-TYAS 274
LR+ +L +E + K L D A+L GL +Y +
Sbjct: 431 DIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTA 490
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI+AY G K +EM +G P + +++ + T L++ +
Sbjct: 491 LIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK 550
Query: 335 MYTSMPNYIIYDTLIENCSNNE-FKSVVGLVKSFSMRG----------LVNEAAR-AHDT 382
+ + I Y+TL++ + + +V FS G L+N AR D
Sbjct: 551 IKGTR---ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 383 MLEG--------NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
L N KPD Y+ +I+ R + +A+ + MV+ G V S L
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLR 667
Query: 435 TALRDHGMYNER 446
L D R
Sbjct: 668 AILEDKAKTKNR 679
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 39/285 (13%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCP--GKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
M + G+ D ++Y +IT C RC KA E+ M + G++PD TYS+++
Sbjct: 212 MVKDGVELDNITYSTIIT--CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKS 269
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
++ E L++ ++ PD I F+ L G++ ++ +M V P+ V
Sbjct: 270 GKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVV- 328
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
YN ++ + G+ A + M E GL+P+ + ++ + + R R A
Sbjct: 329 -------YNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDAL 381
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQ-----GLSDED------------------TYASLIN 277
+L EM K W +D + Y L+ GL +E +Y +++N
Sbjct: 382 QLWEEMKAKK-WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLN 440
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
Y + G+ K + L +EM G + + + L+ L K R D
Sbjct: 441 IYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDD 485
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 55/305 (18%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D+IT++T++ ++KA +M G++PD VT Y+AI+ G+
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVT--------YSAILDVYSKSGK 271
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
VEE L + G PDA+++ ++ F + D
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGE--------------------AGDYDGIR 311
Query: 261 YLMQGLSDED------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y++Q + D Y +L+ A G+ +L +EM G P+ + L+
Sbjct: 312 YVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY 371
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
K +D L + + P ++I+Y+TL+ C++ GL
Sbjct: 372 GKARWARDA----LQLWEEMKAKKWPMDFILYNTLLNMCAD---------------IGLE 412
Query: 374 NEAARAHDTMLEG-NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLA 432
EA R + M E +PD Y ++ + KA ++ EM++ G ++
Sbjct: 413 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 472
Query: 433 LLTAL 437
L+ L
Sbjct: 473 LVQCL 477
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 24/218 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TY+ I+ + +VE+ + + G PDA+++ + F G+A ++
Sbjct: 255 DEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMF------GEAGDYD 308
Query: 99 ------LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
EM + P+ Y++L++A+ + A LF EML P++ T T L+
Sbjct: 309 GIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A + +M K DF+ YN +++ +G EEA +
Sbjct: 369 KIYGKARWARDALQLWEEMKAKKWPMDFI--------LYNTLLNMCADIGLEEEAERLFN 420
Query: 210 GMPE-MGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M E + PD SY +++ + + KA EL EM
Sbjct: 421 DMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 130/304 (42%), Gaps = 51/304 (16%)
Query: 34 ESIQQDLATYNKIIKQHCLMQ--RVEKGVGILRGMAEKGLSPDALSYRYVITGF--CNNR 89
ES + ++ N I+ CL++ +++ + + M GL PD ++Y ++ G N
Sbjct: 160 ESTKINVYICNSILS--CLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFT 146
P KA E E+ GI D+ Y +++ S R EA + Q+M P+ ++
Sbjct: 218 YP-KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV---------------------------T 179
+L+++ +G++ KA + +M G++P+ V
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA 336
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G++ Y ++ GL G++EEA I M G+ D + I+IS C+++ ++A
Sbjct: 337 GYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
EL + E TY D +++ AYC GE+ V+ + +M +
Sbjct: 397 KELSRD---------SETTYEK-----CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 300 SLPD 303
PD
Sbjct: 443 VSPD 446
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 122/271 (45%), Gaps = 30/271 (11%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRR--LSEAYHLFQEMLS---PPDDITFTTLMHACCL 154
+M + G+ PD TY++L+ A C K + +A L E+ D + + T++ C
Sbjct: 191 QMKRDGLKPDVVTYNTLL-AGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICAS 249
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G +A + QM V G SP ++ Y+++++ + G ++A ++ M +
Sbjct: 250 NGRSEEAENFIQQM--------KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSI 301
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
GL P+ V ++ + + ++ EL E++ + +E+ Y LM GLS
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE-SAGYAENEMPYCMLMDGLSK------ 354
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
G+L + ++ D+M KG D +S++I+ L + R K+ K L ++
Sbjct: 355 -------AGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE--LSRDSET 405
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
Y ++ L C E +SV+ ++K
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
+ H VR+ T S + D N IIK + V++ + + + MA G P+
Sbjct: 203 YLHAVRS-----LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPN 257
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
A +Y Y++ G C G+ F EM KG++P+ Y LI +L +RRL EA +
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVY 317
Query: 135 EMLS---PPDDITFTTLMHACCLEGEFSKAFHM 164
+ML+ PD +T+ T++ C G S+A M
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGGRGSEALEM 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEG 156
+M G++PD F + +I+A + EA +F+EM S P+ T++ L+ C +G
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ + +M KG++P+ Y +I L R++EA+ ++ M L
Sbjct: 273 RVGQGLGFYKEMQVKGMVPNGSC--------YMVLICSLSMERRLDEAVEVVYDMLANSL 324
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
SPD ++Y V++ C+ +A E+ E ++
Sbjct: 325 SPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY+ ++K C RV +G+G + M KG+ P+ Y +I R +A E +M
Sbjct: 260 TYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDM 319
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+ PD TY++++ LC R SEA + +E
Sbjct: 320 LANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 38/298 (12%)
Query: 63 LRGMAEKGLSPDALSYRYVITGF-CNNRCPGKAYEFKLEMDQKGIL------PDAFTYSS 115
L+GM K D SY I GF C FK EM ++ + PD TY+S
Sbjct: 238 LKGM--KRFKFDTWSYNICIHGFGCWGDLDAALSLFK-EMKERSSVYGSSFGPDICTYNS 294
Query: 116 LIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LI LC + +A ++ E+ PD+ T+ L+ CC A ++ +M + G
Sbjct: 295 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG 354
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+PD + YN ++ G +V EA + M + G+ +Y I+I G +
Sbjct: 355 FVPDTIV--------YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
N + L ++ +K + +D +T++ + GL C +G+L + L
Sbjct: 407 NGRAEAGFTLFCDLKKKGQF-VDAITFSIV--GLQ-----------LCREGKLEGAVKLV 452
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
+EM +G D V S L+ G K+ R D K L+ I + +PN + ++ +E
Sbjct: 453 EEMETRGFSVDLVTISSLLIGFHKQGRW-DWKEKLMKHIRE--GNLVPNVLRWNAGVE 507
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
S D+ TYN +I CL + + + + + G PD +YR +I G C + A
Sbjct: 284 SFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDA 343
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCL 154
EM G +PD Y+ L+ R+++EA LF++M+
Sbjct: 344 MRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ---------------- 387
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G + +TYN +I GL GR E + + +
Sbjct: 388 ------------------------EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK 423
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
G DA+++ IV C+ +L A +L EM+ + + +D VT + L+ G + +
Sbjct: 424 GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR-GFSVDLVTISSLLIGFHKQGRW 480
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 146/397 (36%), Gaps = 54/397 (13%)
Query: 5 RDSFTATLKTFRHMVRNGV---VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVG 61
+ S TA + FR + R G+ V + + + D ++ + E +G
Sbjct: 89 KHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM---------------DQKG- 105
+L M E G + Y V+ K +E +L + D G
Sbjct: 149 VLDYMEELGDCLNPSVYDSVLIALV------KKHELRLALSILFKLLEASDNHSDDDTGR 202
Query: 106 -----ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP----DDITFTTLMHACCLEG 156
LP + L+ L SE +F+++ D ++ +H G
Sbjct: 203 VIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWG 262
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ A + +M + + + + F P + TYN++IH LC G+ ++AL + + G
Sbjct: 263 DLDAALSLFKEMKERSSV--YGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH 320
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
PD +Y I+I G C++ + A + EM + D Y L+
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGF--------------VPDTIVYNCLL 366
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ ++ + L ++M +G ++LI+GL + R +A L
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR---AEAGFTLFCDLKKK 423
Query: 337 TSMPNYIIYDTL-IENCSNNEFKSVVGLVKSFSMRGL 372
+ I + + ++ C + + V LV+ RG
Sbjct: 424 GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TYN ++ + G+L M E + D +Y +I G A +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
++G D Y++LI AL RL EA LF M S PD +++ T++ G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 159 SKAFHMHHQMIHKGVLPDFVT 179
+A+ M+ G LP+ VT
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT 772
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 128/315 (40%), Gaps = 54/315 (17%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L N++I + + + + E G +P+A +Y + C A
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ-----EMLSPPDDITFTTLMHACC 153
+M + G+L + ++I C + + EAY +++ E PP + TL+ A C
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALC 347
Query: 154 ---------------LEGE--------FSKAFH----MHHQMIHKGVLPDFVT-GFSPAL 185
L GE FS H M + K +L D ++ G +P
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN 407
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+N ++H G ++EA +L+ M GL PD +Y ++ISG+ + + +A E+ E
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS- 304
+K + LS TY +LI YC E + L L +EM G P++
Sbjct: 468 AKKK-------------HKKLSPV-TYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 513
Query: 305 ----VIDSLLINGLD 315
+I S + LD
Sbjct: 514 EYNKLIQSFCLKALD 528
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ E+ ++ + ++ +I C M+ V+ +L M KG +P + V+
Sbjct: 364 SGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDL 423
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM------LSPPDDITF 145
+A E M+ +G+ PD +TY+ +I + EA + E LSP +T+
Sbjct: 424 DEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP---VTY 480
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG-RVEEA 204
L+ C E+ +A + ++M GV P+ YN +I C E+A
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPN--------ADEYNKLIQSFCLKALDWEKA 532
Query: 205 LGILRGMPEMGLSPDAVSYIIV 226
+ M + GL +A+S ++
Sbjct: 533 EVLFEEMKQKGLHLNAISQGLI 554
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 159/428 (37%), Gaps = 87/428 (20%)
Query: 2 KLLRDSFTATLKTFRHMV----RNGVVCRFTAARNSESIQ--QDLATYNKIIKQHCLMQR 55
++L + T TF M+ NG + T+ + + D TYN +I H
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNND 382
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT--- 112
+E+ + M + GL PD +SYR ++ F +A EMD + D +T
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 113 -------------------------------YSSLIQALCSKRRLSEAYHLF---QEMLS 138
YS+ I A + LSEA +F QE ++
Sbjct: 443 LTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQE-VN 501
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
I + ++ A + KA + M+ GV PD TYN ++ L
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC--------TYNTLVQILASA 553
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
+ L M E G D + Y VIS F + +L A E+ EM V + ++
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM---VEYNIE--- 607
Query: 259 YAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
D Y LINA+ G + + ++ + M G +SVI + LI K
Sbjct: 608 --------PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG---LVKSFSMRGLVNE 375
+ +A IY L+++C+ ++ V ++ +S R +V +
Sbjct: 660 YLDEAEA------------------IYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 376 AARAHDTM 383
A D+M
Sbjct: 702 AEAIFDSM 709
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 138/336 (41%), Gaps = 50/336 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
++ + YN +IK + + + EK + M G++PD +Y ++ + P K
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+ +M + G + D Y ++I + +L+ A +++EM+ PD + + L++A
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G +A M G+ + V YN++I +G ++EA I R + +
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSV--------IYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 214 ---MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL-------- 262
PD + +I+ + + +RKA + M ++ +E T+A +
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR--GEANEFTFAMMLCMYKKNG 731
Query: 263 --------------MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD----- 303
M+ L+D +Y S++ + G + + EM G PD
Sbjct: 732 RFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
Query: 304 SVIDSLLINGLDKKA-------RTKDTKAHLLLIIA 332
S+ L+ G+ KKA R K+ K L L I+
Sbjct: 792 SLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWIS 827
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 164/417 (39%), Gaps = 74/417 (17%)
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
+PD +Y +I+ N +A + EM G+ PD +Y +L+ A + + EA
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 132 LFQEMLSPP---DDITFTTL----MHACCLEGEFS--KAFHMHHQMIHKGVLPDFVTGFS 182
L EM D+ T + L + A LE +S K FH+ M +G
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG---------- 473
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
Y+A I G + EA + E+ + Y ++I + ++ KA EL
Sbjct: 474 -----YSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACEL 527
Query: 243 KVEMDRKVVWGL--DEVTYAYLMQGLSDED----------------------TYASLINA 278
M + +G+ D+ TY L+Q L+ D Y ++I++
Sbjct: 528 FESM---MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISS 584
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
+ G+L + EM PD V+ +LIN A T + + + + A
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF---ADTGNVQQAMSYVEAMKEAGI 641
Query: 339 MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK---PDGAVY 395
N +IY++LI K ++ G ++EA + +L+ K PD
Sbjct: 642 PGNSVIYNSLI---------------KLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
N +I + R V KA ++ M + G + F+ +L + +G + E + + +
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRGEANE-FTFAMMLCMYKKNGRFEEATQIAKQ 742
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
+C +E ++ + K+I+ CL Q+V++ + R + G ++ Y +
Sbjct: 240 ICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITI 299
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----P 139
G+ + F E+ + PD F + ++ +LC +R SE +++ E L
Sbjct: 300 GYNEKQDFEDLLSFIGEVKYE---PDVFVGNRILHSLC-RRFGSERAYVYMEELEHLGFK 355
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
D++TF L+ CC EG+ +A +++ KG PD +++YNAI+ GL G
Sbjct: 356 QDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPD--------VYSYNAILSGLFRKG 407
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+ IL M E G+ ++ I+++G+C+ R+ +A
Sbjct: 408 LWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEA 447
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 17/247 (6%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG--LSPDALSYRYVIT 83
R+ +A S+ ++ + + + C V+K + + + M KG L + + V T
Sbjct: 965 RYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVET 1024
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPP 140
P KA +F + + G++ A Y ++I+ L + L A HL ML S P
Sbjct: 1025 LISKGEIP-KAEDFLTRVTRNGMM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIP 1081
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
++ ++++ + KA H +M+ G SP++ T++ ++H C +
Sbjct: 1082 GSSSYDSVINGLLRYNQLDKAMDFHTEMVE--------LGLSPSISTWSGLVHKFCEACQ 1133
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
V E+ +++ M +G SP + VI F + KA E+ +EM +K + +D T+
Sbjct: 1134 VLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEM-MEMMQKCGYEVDFETHW 1192
Query: 261 YLMQGLS 267
L+ +S
Sbjct: 1193 SLISNMS 1199
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 148/402 (36%), Gaps = 52/402 (12%)
Query: 28 TAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN 87
TA +E I Y +IK L ++ LR M GLS Y + G+C
Sbjct: 792 TAFNLAEQIDSSYVHY-ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCK 850
Query: 88 NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML----SPPDDI 143
K E M +K I+ +Y ++ +C + + A L + +L +P I
Sbjct: 851 GNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVI 910
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
+ L+ + + +M +GVLPD T +N ++HG
Sbjct: 911 IYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETT--------FNFLVHGYSSSADYSS 962
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
+L L M G+ P+ S V S C N +++KA +L M+ K W L
Sbjct: 963 SLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK-GWNLGSSV----- 1016
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP---DSVIDSLLINGLDKKART 320
++ ++GE+ K ++ G + D++I L G
Sbjct: 1017 -------VQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRG------N 1063
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
D HLL + S+P YD++I GL++ + ++A H
Sbjct: 1064 LDIAVHLLNTMLK--NQSIPGSSSYDSVIN-----------GLLRYNQL----DKAMDFH 1106
Query: 381 DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
M+E P + ++ L+ C V ++ + MV G
Sbjct: 1107 TEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK-GLSPDALSYRYVITGFCNNRCPGKAY 95
++ + ++N ++ + +++++ + + + EK G++PD ++Y +I C
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
E+++ G PD ++++L++ + E ++ M S P+ ++ + +
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
+F+ A ++ M +G+ PD + TYNA+I +EE + M
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPD--------VHTYNALITAYRVDNNLEEVMKCYNEMK 325
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
E GL+PD V+Y ++I C+ +L +A E+ E
Sbjct: 326 EKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQ 167
++++L+ A + ++L EA F+E+ PD +T+ T++ A C +G + +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+ GF P L ++N ++ E I M LSP+ SY +
Sbjct: 219 LEK--------NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRV 270
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELF 286
G +N++ A L M +G+S D TY +LI AY L
Sbjct: 271 RGLTRNKKFTDALNLIDVMK---------------TEGISPDVHTYNALITAYRVDNNLE 315
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+V+ +EM KG PD+V +LI L KK
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ DL ++N ++++ + +G I M K LSP+ SY + G N+ A
Sbjct: 224 FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDAL 283
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
M +GI PD TY++LI A L E + EM PD +T+ L+
Sbjct: 284 NLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +G+ +A + + I +L P + Y ++ L G+++EA +++
Sbjct: 344 CKKGDLDRAVEVSEEAIKHKLLS------RPNM--YKPVVERLMGAGKIDEATQLVKN 393
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I DL TYN +IK C ++ + I + + G PD +S+ ++ F +
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
M K + P+ +Y+S ++ L ++ ++A +L M + PD T+ L+ A
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
++ + +++M KG+ PD V TY +I LC G ++ A+ +
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGLTPDTV--------TYCMLIPLLCKKGDLDRAVEV 355
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/282 (18%), Positives = 113/282 (40%), Gaps = 48/282 (17%)
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
+ G E A + MPE+ S+ ++S + +++L +A + E+ K+ D
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDL 193
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
VTY ++I A C +G + +L++ +E+ G PD + + L+ +
Sbjct: 194 VTYN-------------TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR 240
Query: 317 KARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCS-NNEFKSVVGLVKSFSM 369
+ L + D ++ M PN Y++ + + N +F + L+
Sbjct: 241 RE---------LFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 370 RGL-------------------VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK 410
G+ + E + ++ M E PD Y +LI C++ ++ +
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Query: 411 AYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
A + E +++ +S ++ L G +E + +++N
Sbjct: 352 AVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
++L+++N I+ + + V+ +G+L M GL PD +++ +++G+ + A
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKR--RLSEAYH--LFQEMLSPPDDITFTTLMHACC 153
M G+ P + SSL+QA+ +L +A H + + L D TTL+
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW-YDVYVETTLIDMYI 271
Query: 154 LEGEFSKAFHMHHQMIHKGVLP--DFVTGFS---------------------PALFTYNA 190
G A + M K ++ V+G S P T+N+
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
+ G LG+ E+AL ++ M E G++P+ VS+ + SG +N R A ++ ++M +
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 251 VWGLDEVTYAYLMQ 264
V G + T + L++
Sbjct: 392 V-GPNAATMSTLLK 404
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E I+ D T+N + + + + EK + ++ M EKG++P+ +S+ + +G N
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMH 150
A + ++M ++G+ P+A T S+L++ L L + L D T L+
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVD 439
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G+ A + + +K +L ++N ++ G GR EE +
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNK------------SLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 211 MPEMGLSPDAVSYIIVISGFCQNREL 236
M E G+ PDA+++ V+S C+N L
Sbjct: 488 MLEAGMEPDAITFTSVLS-VCKNSGL 512
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KAYE + KG + +YS +I LC R+ E+Y QEM PD + L+
Sbjct: 383 KAYEL---LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
ACC A + +M FV G L TYN +I L G EE+L +
Sbjct: 440 EACCKAEMIRPAKKLWDEM--------FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL---KVEMDRKVV 251
M E G+ PD Y+ +I G C+ ++ A E+ +E D K V
Sbjct: 492 KMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTV 536
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 131/312 (41%), Gaps = 57/312 (18%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQK- 104
I+ C R IL + PD ++YR + F G YE ++ + +K
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFV---VTGNLYERQVVLKKKR 285
Query: 105 --GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPD-DITFTTLMHACCLEGEF 158
G+ P + Y + I L S +RL+EA + + ++S P D DI + ++ +
Sbjct: 286 KLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDS 345
Query: 159 SKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAI 191
+ F ++ M+ G LP T G+ L +Y+ +
Sbjct: 346 AVEFLVY--MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I LC GRV E+ L+ M + GL+PD Y +I C+ +R A +L EM V
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM---FV 460
Query: 252 WG--LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
G ++ TY L++ LS+E GE + L L D+M +G PD I
Sbjct: 461 EGCKMNLTTYNVLIRKLSEE-------------GEAEESLRLFDKMLERGIEPDETIYMS 507
Query: 310 LINGLDKKARTK 321
LI GL K+ + +
Sbjct: 508 LIEGLCKETKIE 519
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ T +K+ K C + + + ++ KG + SY +I+ C ++Y
Sbjct: 362 IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQ 421
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMHACCLEG 156
EM ++G+ PD Y++LI+A C + A L+ EM + TT L+ EG
Sbjct: 422 EMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
E ++ + +M+ +G+ PD Y ++I GLC ++E A+ + R
Sbjct: 482 EAEESLRLFDKMLERGIEPDET--------IYMSLIEGLCKETKIEAAMEVFR 526
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L +Y+ +I C RV + L+ M ++GL+PD Y +I C A +
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM +G + TY+ LI+ L + E+ LF +ML PD+ + +L+ C E
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 156 GE-------FSKAFHMHHQMIHKGVLPDFV 178
+ F K H+ + + VL +FV
Sbjct: 516 TKIEAAMEVFRKCMERDHKTVTRRVLSEFV 545
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 155/383 (40%), Gaps = 50/383 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRG---MAEKGL-SPDALSYRYVITGFCNNRCP 91
+ D+ +YN ++K CL RV+ I + M GL DA +Y +I F + +
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW 390
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
A + K +M G+ P+ T+SSLI A + + +A HLF+EML+ P+ F L
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 149 MHACCLEGEFSKAFHMHHQM----IHKGVLPDFVTG----FSPALFTYNAIIHGLCFLGR 200
+HAC ++ +AF + +++ + D + SP + N G L
Sbjct: 451 LHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN----GPGSLVN 506
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
++ P +Y I++ + Y K MD GL
Sbjct: 507 RNSNSPYIQASKRFCFKPTTATYNILLKACGTDY-----YRGKELMDEMKSLGLS----- 556
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
++ T+++LI+ G++ + + M G+ PD V + I A
Sbjct: 557 ------PNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKIC---AEN 607
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
K K L Y PN++ Y+TL++ + +++ S++ + + ++ +
Sbjct: 608 KCLKLAFSLFEEMRRYQIKPNWVTYNTLLK--ARSKYGSLLEVRQCLAI----------Y 655
Query: 381 DTMLEGNYKPDGAVYNLLIFDHC 403
M YKP+ LI + C
Sbjct: 656 QDMRNAGYKPNDHFLKELIEEWC 678
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEML-----SPPDDITFTTLMHACCLEG------ 156
PD + Y+++I ALC +A L +M PPD T+T L+ + C G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 157 -----EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+A M +M+ +G +PD VT YN +I G C R+ AL + M
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVT--------YNCLIDGCCKTNRIGRALELFEDM 309
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G P+ V+Y I + E+ A E+ M + L G+ T
Sbjct: 310 KTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK-------------LGHGVPGSST 356
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK--ARTKDTKAH 326
Y LI+A + L EM G +P L+ + L + A T D + H
Sbjct: 357 YTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELH 413
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL--SPDALSYRYVITGFCN------- 87
+ D+ YN II C + +K +L M G PD +Y +I+ +C
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 88 ----NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---P 140
R +A EM +G +PD TY+ LI C R+ A LF++M + P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQM--IHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
+ +T+ + + + E A M M + GV P TY +IH L
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV---------PGSSTYTPLIHALVET 367
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIV 226
R EA ++ M E GL P +Y +V
Sbjct: 368 RRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 113/286 (39%), Gaps = 60/286 (20%)
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
G V+EAL M E PD +Y +I+ C+ +KA L +M L
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ------LPGFR 232
Query: 259 YAYLMQGLSDEDTYASLINAYCAQG-----------ELFKVLTLDDEMSHKGSLPDSVID 307
Y D TY LI++YC G +++ + EM +G +PD V
Sbjct: 233 YP------PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCS-NNEFKSVVGLV 364
+ LI+G K R L + D M T +PN + Y++ I S NE + + ++
Sbjct: 287 NCLIDGCCKTNRI----GRALELFED-MKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM 341
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ +M+ L G+ P + Y LI +A ++ +EMV G V
Sbjct: 342 R--TMKKL-------------GHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLV 386
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNE 470
++ + AL G+ +TL D ELHK + E
Sbjct: 387 PREYTYKLVCDALSSEGL--------ASTL------DEELHKRMRE 418
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 43/315 (13%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
+++ YN +K + +EK + M E+G+ PD ++ +I+ N P +A E+
Sbjct: 173 REVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEW 232
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCL 154
+M G PD T +++I A + A L+ + D +TF+TL+ +
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFV---------------------------TGFSPALFT 187
G + +++ +M GV P+ V GF+P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
Y A++ ++AL I R M E GLS + Y ++S NR + +A+E + D
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE--IFQD 410
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
K D D T++SLI Y G + + +M G P +
Sbjct: 411 MKNCETCD-----------PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVL 459
Query: 308 SLLINGLDKKARTKD 322
+ +I K + D
Sbjct: 460 TSVIQCYGKAKQVDD 474
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ +L YN++I +R + I + + G +P+ +Y ++ + R A
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLMHA 151
EM +KG+ Y++L+ R + EA+ +FQ+M + PD TF++L+
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
G S+A QM GF P LF ++I +V++ + +
Sbjct: 431 YACSGRVSEAEAALLQMRE--------AGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQV 482
Query: 212 PEMGLSPD 219
E+G++PD
Sbjct: 483 LELGITPD 490
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 129/305 (42%), Gaps = 45/305 (14%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D T+TT++ +F + + +M+ G P+ VT YN +IH
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT--------YNRLIHSYGRANY 409
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
++EA+ + M E G PD V+Y +I KA L + MD Y
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA------KAGFLDIAMD----------MYQ 453
Query: 261 YLMQ-GLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+ + GLS D TY+ +IN G L L EM +G P+ V +++I L KA
Sbjct: 454 RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKA 512
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
R +T L + + + P+ + Y ++E V+G G + EA
Sbjct: 513 RNYETALKLYRDMQNAGF--QPDKVTYSIVME---------VLGHC------GFLEEAEG 555
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL-TAL 437
M N+ PD VY LL+ + NV KA+ Y M++ G ++ + +LL T L
Sbjct: 556 VFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Query: 438 RDHGM 442
R H M
Sbjct: 616 RVHRM 620
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + + TYN++I + +++ + + M E G PD ++Y +I
Sbjct: 388 DGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + M + G+ PD FTYS +I L L A+ LF EM+ P+ +TF ++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ A ++ M + G PD V TY+ ++ L G +EEA G+
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKV--------TYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
M PD Y +++ + + + KA++
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 142/342 (41%), Gaps = 47/342 (13%)
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
Q G D TY++++ L ++ E L EM+ P+ +T+ L+H+
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+A ++ +QM G PD V TY +I G ++ A+ + + M E GLSPD
Sbjct: 412 EAMNVFNQMQEAGCEPDRV--------TYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAY 279
+Y ++I+ + L A+ L EM + QG + +++ A
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEM---------------VGQGCTPNLVTFNIMIAL 508
Query: 280 CAQGELFKV-LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
A+ ++ L L +M + G PD V S+++ L ++ + + A+ +
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG----VFAEMQRKN 564
Query: 339 -MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
+P+ +Y L++ + G V++A + + ML+ +P+ N
Sbjct: 565 WVPDEPVYGLLVD---------------LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
L+ R + +AYN+ M+ G + + LL+ D
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD 651
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 123/315 (39%), Gaps = 52/315 (16%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D YN +I+ + +++ M GL PD ++Y +I G+CN A+
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM-------LSPPDDITFTTLMHA 151
EM + + ++ TYS +++ +C + A L EM L P+ +T+T ++ A
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTG-------------------FSPALFTYNAII 192
C + +A + +M ++G +P+ VT L +
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVS 343
Query: 193 HGLCF---------LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
CF + R EEA I R M G+ PD ++ V C + L
Sbjct: 344 LSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLY 403
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLT-----LDDEMSHK 298
E+++K V + D D +A L+ C QG ++ LD +M K
Sbjct: 404 QEIEKKDV------------KSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLK 451
Query: 299 GSLPDSVIDSLLING 313
S + +I++L G
Sbjct: 452 VSHVEKIIEALKKTG 466
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 116 LIQALCSKRRLSE----AYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
++ LC++ L++ F E D + + ++ +G+ + A + +M
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
G+ PD +T Y ++I+G C G++++A + + M + ++V+Y ++ G C
Sbjct: 195 GLYPDVIT--------YTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
++ ++ +A EL EM+++ GL TY +I A+C + + + L +
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAV----------TYTLVIQAFCEKRRVEEALLV 296
Query: 292 DDEMSHKGSLPDSVIDSLLINGL-----DKKARTK 321
D M ++G +P+ V +LI G+ D KA +K
Sbjct: 297 LDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSK 331
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F A K MVR+G Q + TYN++I + + + + + M
Sbjct: 380 FGAINKLLDEMVRDGC-------------QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 68 EKGLSPDALSYRYVI-----TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
E G PD ++Y +I GF + A + M G+ PD FTYS +I L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLD-----IAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
L A+ LF EM+ P+ +T+ +M + A ++ M + G PD V
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV- 540
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TY+ ++ L G +EEA + M + PD Y +++ + + + KA
Sbjct: 541 -------TYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 240 YE 241
++
Sbjct: 594 WQ 595
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 46/317 (14%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D T+TT++ +F + +M+ G P+ VT YN +IH
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT--------YNRLIHSYGRANY 414
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD---RKVVWGLDEV 257
+ EA+ + M E G PD V+Y +I KA L + MD R GL
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA------KAGFLDIAMDMYQRMQAGGLSPD 468
Query: 258 TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
T+ TY+ +IN G L L EM +G P+ V +++++ L K
Sbjct: 469 TF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAK 516
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAA 377
AR L + + + P+ + Y ++E V+G G + EA
Sbjct: 517 ARNYQNALKLYRDMQNAGFE--PDKVTYSIVME---------VLGHC------GYLEEAE 559
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
M + N+ PD VY LL+ + NV KA+ Y M+ G ++ + +LL+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 438 RDHGMYNERSWVIQNTL 454
E ++QN L
Sbjct: 620 LRVNKIAEAYELLQNML 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M ++G +P+ ++Y ++ R A + +M G PD TYS +++ L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L EA +F EM PD+ + L+ G KA+ + M+H G+ P+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN------ 608
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+ T N+++ + ++ EA +L+ M +GL P +Y +++S
Sbjct: 609 --VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F A K MVR+G Q + TYN++I + + + + + M
Sbjct: 380 FGAINKLLDEMVRDGC-------------QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 68 EKGLSPDALSYRYVI-----TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
E G PD ++Y +I GF + A + M G+ PD FTYS +I L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLD-----IAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
L A+ LF EM+ P+ +T+ +M + A ++ M + G PD V
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV- 540
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TY+ ++ L G +EEA + M + PD Y +++ + + + KA
Sbjct: 541 -------TYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 240 YE 241
++
Sbjct: 594 WQ 595
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 46/317 (14%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D T+TT++ +F + +M+ G P+ VT YN +IH
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT--------YNRLIHSYGRANY 414
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD---RKVVWGLDEV 257
+ EA+ + M E G PD V+Y +I KA L + MD R GL
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA------KAGFLDIAMDMYQRMQAGGLSPD 468
Query: 258 TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
T+ TY+ +IN G L L EM +G P+ V +++++ L K
Sbjct: 469 TF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAK 516
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAA 377
AR L + + + P+ + Y ++E V+G G + EA
Sbjct: 517 ARNYQNALKLYRDMQNAGFE--PDKVTYSIVME---------VLGHC------GYLEEAE 559
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
M + N+ PD VY LL+ + NV KA+ Y M+ G ++ + +LL+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 438 RDHGMYNERSWVIQNTL 454
E ++QN L
Sbjct: 620 LRVNKIAEAYELLQNML 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M ++G +P+ ++Y ++ R A + +M G PD TYS +++ L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L EA +F EM PD+ + L+ G KA+ + M+H G+ P+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN------ 608
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+ T N+++ + ++ EA +L+ M +GL P +Y +++S
Sbjct: 609 --VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F A K MVR+G Q + TYN++I + + + + + M
Sbjct: 380 FGAINKLLDEMVRDGC-------------QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 68 EKGLSPDALSYRYVI-----TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
E G PD ++Y +I GF + A + M G+ PD FTYS +I L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLD-----IAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
L A+ LF EM+ P+ +T+ +M + A ++ M + G PD V
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV- 540
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TY+ ++ L G +EEA + M + PD Y +++ + + + KA
Sbjct: 541 -------TYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 240 YE 241
++
Sbjct: 594 WQ 595
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 46/317 (14%)
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D T+TT++ +F + +M+ G P+ VT YN +IH
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT--------YNRLIHSYGRANY 414
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD---RKVVWGLDEV 257
+ EA+ + M E G PD V+Y +I KA L + MD R GL
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA------KAGFLDIAMDMYQRMQAGGLSPD 468
Query: 258 TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
T+ TY+ +IN G L L EM +G P+ V +++++ L K
Sbjct: 469 TF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAK 516
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAA 377
AR L + + + P+ + Y ++E V+G G + EA
Sbjct: 517 ARNYQNALKLYRDMQNAGFE--PDKVTYSIVME---------VLGHC------GYLEEAE 559
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
M + N+ PD VY LL+ + NV KA+ Y M+ G ++ + +LL+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 438 RDHGMYNERSWVIQNTL 454
E ++QN L
Sbjct: 620 LRVNKIAEAYELLQNML 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M ++G +P+ ++Y ++ R A + +M G PD TYS +++ L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L EA +F EM PD+ + L+ G KA+ + M+H G+ P+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN------ 608
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+ T N+++ + ++ EA +L+ M +GL P +Y +++S
Sbjct: 609 --VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 128/290 (44%), Gaps = 28/290 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I+ D T+N +I C ++ + ++ M +PD ++Y + +C +
Sbjct: 267 DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRR 326
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
E EM + G P+ TY+ ++ +L ++++EA ++++M PD +++L+H
Sbjct: 327 VNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIH 386
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G F A + M ++GV D + YN +I R E AL +L+
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRD--------VLVYNTMISAALHHSRDEMALRLLKR 438
Query: 211 MPE---MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
M + SP+ +Y ++ C ++++ L M + V +D TY L++GL
Sbjct: 439 MEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDV-SIDVSTYILLIRGL- 496
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
C G++ + +E KG +P +L++ L+KK
Sbjct: 497 ------------CMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKK 534
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 47/303 (15%)
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI-----TFTTLMHACCLEGE 157
Q G + TY++++ L R + L EM + T + +M G+
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 158 FSKAFHMHHQMIHK-GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
++KA +M GV D + N+++ L +E A + + + +
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIA--------MNSLMDALVKENSIEHAHEVFLKLFDT-I 269
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
PDA ++ I+I GFC+ R+ D + + L +VT + D TY S +
Sbjct: 270 KPDARTFNILIHGFCKARKFD---------DARAMMDLMKVT-----EFTPDVVTYTSFV 315
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
AYC +G+ +V + +EM G P+ V +++++ L K + +
Sbjct: 316 EAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG----------- 364
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
+Y+ + E+ + K L+ S G +AA + M + D VYN
Sbjct: 365 -------VYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYN 417
Query: 397 LLI 399
+I
Sbjct: 418 TMI 420
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 194/489 (39%), Gaps = 107/489 (21%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
AA S+ QD N+ I +R++ V + M E P+ Y + GF
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFVTC 849
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQA----------------------------- 119
P ++ E + M + + P ++TYSSL++A
Sbjct: 850 SHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTT 909
Query: 120 ----LCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
+ R+ EA +F EM DDI +TT++ A + A + +QM K
Sbjct: 910 LIDFYSATGRIREARKVFDEM-PERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA- 967
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
T N +I+G LG +E+A + MP D +S+ +I G+ QN+
Sbjct: 968 -----------TSNCLINGYMGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKR 1012
Query: 236 LRKAYELKVEMDRKVVWGLDEVT--------------------YAYLMQGLSDEDTY--A 273
R+A + +M + + DEVT + Y +Q D Y +
Sbjct: 1013 YREAIAVFYKMMEEGIIP-DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 1071
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSL-PDSVIDSLLINGLDKKA-------RTKDTKA 325
+L++ Y G L + L + + K +S+I+ L +G ++A + K
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1131
Query: 326 HLLLIIADYMYTSMPNYI-----IYDTLIENCS-NNEFKSVVGLVKSFSMRGLVNEAARA 379
+ + ++ + + + IY ++I++ S + + G+V FS GL+ EA
Sbjct: 1132 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 1191
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK-------AYN--MYMEMVRYGFVSHMFSV 430
M ++P+ ++ L+ D CR +HK A+N M +E + G+ + S+
Sbjct: 1192 IGNM---EFEPNAVIWGALL-DGCR---IHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSM 1244
Query: 431 LALLTALRD 439
A RD
Sbjct: 1245 YAEQNRWRD 1253
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 14/223 (6%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
RNS D TY ++ +++ +L MA G+ + ++Y ++ G+C
Sbjct: 446 RNS---HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQ 502
Query: 91 PGKAYEFKLEM-DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFT 146
+A + EM + GI PD +Y+ +I + A F EM + P I++T
Sbjct: 503 IDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYT 562
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
TLM A + G+ A + +M++ + L +N ++ G C LG +E+A
Sbjct: 563 TLMKAFAMSGQPKLANRVFDEMMNDPRV-------KVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
++ M E G P+ +Y + +G Q R+ A L E+ +
Sbjct: 616 VVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 26/260 (10%)
Query: 69 KGLSPDALSYRYVITGFCNN-RCPGKA--YEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
K +PD+ Y ++ G+ N R A E D + PD TY++++ A +
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ A + EM P + IT+ L+ C + + +A + +M G
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA-------GIE 520
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + +YN II G + AL M G++P +SY ++ F + + + A +
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRV 580
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
EM +D + + L++G YC G + + M G P
Sbjct: 581 FDEMMNDPRVKVDLIAWNMLVEG-------------YCRLGLIEDAQRVVSRMKENGFYP 627
Query: 303 DSVIDSLLINGLDKKARTKD 322
+ L NG+ + + D
Sbjct: 628 NVATYGSLANGVSQARKPGD 647
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 125/327 (38%), Gaps = 43/327 (13%)
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM---PEMGLSPDAVSYIIVIS 228
G P F+P Y ++ G GRV + +L M + PD V+Y V+S
Sbjct: 401 GEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
F + +A ++ EM R V + +TY L++G YC Q ++ +
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGV-PANRITYNVLLKG-------------YCKQLQIDRA 506
Query: 289 LTLDDEMSHKGSL-PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
L EM+ + PD V +++I+G D+ L P I Y T
Sbjct: 507 EDLLREMTEDAGIEPDVVSYNIIIDGC---ILIDDSAGALAFFNEMRTRGIAPTKISYTT 563
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML-EGNYKPDGAVYNLLIFDHCRRL 406
L+ K+F+M G A R D M+ + K D +N+L+ +CR
Sbjct: 564 LM---------------KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHK 466
+ A + M GF ++ + +L + + + + C + E
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKE--- 665
Query: 467 VLNEIDTRKFPPI---GATLLDVLAEI 490
++ + PP+ LLD LA+I
Sbjct: 666 APSDSSSDPAPPMLKPDEGLLDTLADI 692
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 101/266 (37%), Gaps = 49/266 (18%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIH---KGVLPDFVTGFSPALFTYNAIIHGLC 196
PD +TTLM G + M M + PD VT Y ++
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVT--------YTTVVSAFV 463
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G ++ A +L M MG+ + ++Y +++ G+C+ ++ +A +L EM D
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 257 VTYAYLMQG--LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
V+Y ++ G L D+ A L +EM +G P + + L+
Sbjct: 524 VSYNIIIDGCILIDDSAGA---------------LAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPN--YIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
+ K +A+ ++ M N + D + N LV+ + GL
Sbjct: 569 AMSGQPK---------LANRVFDEMMNDPRVKVDLIAWNM----------LVEGYCRLGL 609
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLL 398
+ +A R M E + P+ A Y L
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSL 635
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D N +IK C +E + +L ++ P+ +++ +I GFCN +A+
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
+ M+++ I PD T++ LI L K R+ E L + M P+ T+ +++
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
+ +A M QMI G+ P F+ +Y ++ GLC V E +LR M
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFL--------SYKKMVLGLCETKSVVEMDWVLRQMV 369
Query: 213 EMGLSPDAVSYIIVIS 228
G P + + V+
Sbjct: 370 NHGFVPKTLMWWKVVQ 385
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G+ DA +I G C + A + E Q+ P+ T+S LI+ C+K + EA
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+ L + M PD ITF L+ +G + + +M KG P+ P
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN------PG-- 308
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TY +++GL R EA ++ M G+ P +SY ++ G C+ + + VEM
Sbjct: 309 TYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV-------VEM 361
Query: 247 D 247
D
Sbjct: 362 D 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 61/282 (21%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A E M G P + +++ ++ L S + E + +F +S P + AC
Sbjct: 150 RAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF---VSAP---KLGVEIDAC 203
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL N +I GLC G +E AL +L P
Sbjct: 204 CL----------------------------------NILIKGLCESGNLEAALQLLDEFP 229
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ P+ +++ +I GFC + +A++L M+++ + D +T+ L+ GL
Sbjct: 230 QQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI-EPDTITFNILISGLR----- 283
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+G + + + L + M KG P+ ++ GL K R + K + +I+
Sbjct: 284 --------KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMIS 335
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
+ P+++ Y ++ E KSVV + + +R +VN
Sbjct: 336 ---WGMRPSFLSYKKMVLGLC--ETKSVVEM--DWVLRQMVN 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E I+ D T+N +I RVE+G+ +L M KG P+ +Y+ V+ G + + +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A E +M G+ P +Y ++ LC + + E + ++M++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVN 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 41/261 (15%)
Query: 186 FTYNAI-IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR---ELRKAY- 240
F YN + I+G GR+ A+ IL GMP+ G P + S+ +++ + E+ K +
Sbjct: 133 FFYNLMRIYG-NLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFV 191
Query: 241 ---ELKVEMD----RKVVWGLDEVTYAYLMQGLSDE----------DTYASLINAYCAQG 283
+L VE+D ++ GL E L DE T++ LI +C +G
Sbjct: 192 SAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI 343
+ + L + M + PD++ ++LI+GL KK R ++ + L+ + PN
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG---IDLLERMKVKGCEPNPG 308
Query: 344 IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
Y ++ GL+ R L EA M+ +P Y ++ C
Sbjct: 309 TYQEVL-----------YGLLD--KKRNL--EAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 404 RRLNVHKAYNMYMEMVRYGFV 424
+V + + +MV +GFV
Sbjct: 354 ETKSVVEMDWVLRQMVNHGFV 374
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 27/291 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I D +YN +I + VE+ +L+ M E G PD LSY ++I G +
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
E + KG +PDA Y+++I S R E+ ++ ML P+ T++ L+
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+ S A + +M+ +GVLP TG + + LC G A+ I +
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLP--TTGL------VTSFLKPLCSYGPPHAAMVIYQKS 421
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG-LDEVTYAYLMQGLSDED 270
+ G +Y +++ + L + + + ++ VW + E Y SD +
Sbjct: 422 RKAGCRISESAYKLLL------KRLSRFGKCGMLLN---VWDEMQESGYP------SDVE 466
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
Y +++ C G L + + +E KG P+ + S L + L +T+
Sbjct: 467 VYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 163/410 (39%), Gaps = 44/410 (10%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
+V F A + +D+ +Y+ I++ + + +L+GM +G++PD
Sbjct: 133 AMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIA 192
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--P 139
+ F +A E E + G+ ++++L++ LC + +S A +F P
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIP 252
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
D ++ ++ GE + + +M+ +GF P +Y+ +I GL G
Sbjct: 253 FDSCSYNIMISGWSKLGEVEEMEKVLKEMVE--------SGFGPDCLSYSHLIEGLGRTG 304
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
R+ +++ I + G PDA Y +I F R+ ++ M LDE
Sbjct: 305 RINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRM-------LDEECE 357
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS-VIDSLLINGLDKKA 318
L +TY+ L++ ++ L + +EM +G LP + ++ S L K
Sbjct: 358 PNL-------ETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL------KP 404
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
H ++I Y + I S + +K ++ + F G++
Sbjct: 405 LCSYGPPHAAMVI--YQKSRKAGCRI--------SESAYKLLLKRLSRFGKCGML---LN 451
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMF 428
D M E Y D VY ++ C ++ A + E +R GF + F
Sbjct: 452 VWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 169/401 (42%), Gaps = 61/401 (15%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
++++ T+ ++ + +++ + + M E+ + +S+ +I G+ + KA E
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALE 161
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI-TFTTLMHACCLE 155
EM ++ I+ +++S+++AL + R+ EA +LF+ M P D+ ++T ++
Sbjct: 162 LFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERM--PRRDVVSWTAMVDGLAKN 215
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A + M + ++ ++NA+I G R++EA + + MPE
Sbjct: 216 GKVDEARRLFDCMPERNII------------SWNAMITGYAQNNRIDEADQLFQVMPER- 262
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
D S+ +I+GF +NRE+ KA L M K V ++ ++
Sbjct: 263 ---DFASWNTMITGFIRNREMNKACGLFDRMPEKNV------------------ISWTTM 301
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVID--SLLINGLDKKARTKDTKAHLLLIIAD 333
I Y E + L + +M GS+ +V S+L D + + H L+ +
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 334 Y------------MYTSMPNYIIYDTLIEN--CSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+ MY+ I + +N + S ++ ++ G EA
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
++ M + +KP Y L+F V K + ++VR
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/434 (18%), Positives = 179/434 (41%), Gaps = 73/434 (16%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
+I + C + ++ + + G+ E+ D +++ +VITG+ G E + D+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIK---LGDMREARELFDRVD 104
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI-TFTTLMHACCLEGEFSKAFHM 164
+ T+++++ ++LS A LFQEM P ++ ++ T++ G KA +
Sbjct: 105 SRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM--PERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+M + ++ ++N+++ L GR++EA+ + MP D VS+
Sbjct: 163 FDEMPERNIV------------SWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWT 206
Query: 225 IVISGFCQNRELRKAYELKVEM-DRKVV-WG-----------LDEVTYAYLMQGLSDEDT 271
++ G +N ++ +A L M +R ++ W +DE + + D +
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+ ++I + E+ K L D M K + + +I G + ++ ++
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTT----MITGYVENKENEEALNVFSKML 322
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN---- 387
D + PN Y +++ CS+ + GLV+ + L++++ + ++
Sbjct: 323 RDG--SVKPNVGTYVSILSACSD-----LAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375
Query: 388 YKPDGAV-------------------YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMF 428
Y G + +N +I + + +A MY +M ++GF
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 429 SVLALLTALRDHGM 442
+ L LL A G+
Sbjct: 436 TYLNLLFACSHAGL 449
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 20/236 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+QDL +N +I + + ++ + +++ M G+ PD +++ +I+GF + R K E
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
M G PD +++S+I L + +A+ F++ML+ P+ T TL+ AC
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII--HGLCFLGRVEEALGILRGM 211
+ A+ H + IH VTG F +A++ +G C G + EA+ + R
Sbjct: 300 -----TLAYMKHGKEIHG---YSVVTGLEDHGFVRSALLDMYGKC--GFISEAMILFRKT 349
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
P+ V++ +I + + KA EL +M+ LD +T+ ++ S
Sbjct: 350 PK----KTTVTFNSMIFCYANHGLADKAVELFDQME-ATGEKLDHLTFTAILTACS 400
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 25/253 (9%)
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
G + P + ++ G+ +R +A + EM + P TY +LI+ C R
Sbjct: 240 GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMR 299
Query: 125 RLSEAYHLFQEMLSPPDDI---TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
R+ A + +EM +I F ++ G S+A M + FV
Sbjct: 300 RVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF--------FVCES 351
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P + TYN+++ C G + A IL+ M G+ P +Y F ++
Sbjct: 352 GPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN------- 404
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
K E + + L E ++ D TY ++ C G+L + ++ EM ++G
Sbjct: 405 -KTEEGMNLYFKLIEAGHS------PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 302 PDSVIDSLLINGL 314
PD + ++LI+ L
Sbjct: 458 PDLLTTTMLIHLL 470
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
G++ RF + +I TYN ++K C + IL+ M +G+ P +Y +
Sbjct: 341 GMMERFFVCESGPTI----VTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--- 138
F + + ++ + G PD TY +++ LC +LS A + +EM +
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
PD +T T L+H C +AF + +G++P ++T
Sbjct: 457 DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYIT 497
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 35/256 (13%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+N ++ +++++ + M + P ++Y +I G+C R A E EM
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFS 159
+ + ++ +I L RLSEA + + S P +T+ +L+ C G+
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 160 KAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAII 192
A + M+ +GV P T G SP TY+ I+
Sbjct: 373 GASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
LC G++ A+ + + M G+ PD ++ ++I C+ L +A+E E D V
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE---EFDNAVRR 489
Query: 253 GL--DEVTYAYLMQGL 266
G+ +T+ + GL
Sbjct: 490 GIIPQYITFKMIDNGL 505
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 98/235 (41%), Gaps = 48/235 (20%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILR-------------------GMAEKGL---- 71
+++ + TY +I+ +C M+RV+ + +L G+ E G
Sbjct: 280 NVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA 339
Query: 72 ------------SPDALSYRYVITGFCN-NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
P ++Y ++ FC PG + K+ M +G+ P TY+ +
Sbjct: 340 LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM-TRGVDPTTTTYNHFFK 398
Query: 119 ALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
+ E +L+ +++ PD +T+ ++ C +G+ S A ++ +M ++G+ P
Sbjct: 399 YFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
D L T +IH LC L +EEA G+ P +++ ++ +G
Sbjct: 459 D--------LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ + TYN K + E+G+ + + E G SPD L+Y ++ C +
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITF 145
A + EM +GI PD T + LI LC L EA+ F + P ITF
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 123/317 (38%), Gaps = 46/317 (14%)
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
L+ A C EG +A M+ + I + ++V P++ +N +++G ++++A +
Sbjct: 218 LLDALCKEGHVREA-SMYLERIGGTMDSNWV----PSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-----------RKVVWGLDE 256
M M + P V+Y +I G+C+ R ++ A E+ EM ++ GL E
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 257 VTYAYLMQGLSDE----------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
G+ + TY SL+ +C G+L + M +G P +
Sbjct: 333 AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTT 392
Query: 307 DSLLINGLDKKARTKD-TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
+ K +T++ + LI A + + ++I L C + + + + K
Sbjct: 393 YNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML---CEDGKLSLAMQVNK 449
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
RG+ PD +LI CR + +A+ + VR G +
Sbjct: 450 EMKNRGI----------------DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Query: 426 HMFSVLALLTALRDHGM 442
+ + LR GM
Sbjct: 494 QYITFKMIDNGLRSKGM 510
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 178/445 (40%), Gaps = 65/445 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I DL YN +I + + + +++ M E G+ P+ +SY +++ + N +A
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF---QEMLSPPDDITFTTLMHAC 152
EM + D T + +I + EA LF ++M P+ +++ T++
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
F +A H+ M K + + V TYN +I E+A +++ M
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVV--------TYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----- 267
G+ P+A++Y +IS + + +L +A A L Q L
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRA--------------------ATLFQKLRSSGVE 467
Query: 268 -DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
D+ Y ++I AY G ++ + H+ LPD++ I L K RT++
Sbjct: 468 IDQVLYQTMIVAYERVG----LMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEAT-- 521
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
+ + + + ++ +I S N+ V +++ F + M
Sbjct: 522 -WVFRQAFESGEVKDISVFGCMINLYSRNQ--RYVNVIEVF-------------EKMRTA 565
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV---SHMFSVLALLTALRDHGMY 443
Y PD V +++ + ++ KA +Y EM G V F +L+L ++ +D M
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMV 625
Query: 444 NERSWVIQNTLRSCNLNDSELHKVL 468
+ Q N+N ELH V+
Sbjct: 626 ES---LFQRLESDPNVNSKELHLVV 647
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 11/230 (4%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+Q++ TYN +IK + EK +++ M +G+ P+A++Y +I+ + +
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACC 153
A ++ G+ D Y ++I A + A L E L PD+I T +
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE-LKLPDNIPRETAITILA 512
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDF-VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G +A + Q G + D V G L++ N R + + M
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ---------RYVNVIEVFEKMR 563
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
G PD+ +V++ + + RE KA + EM + DEV + L
Sbjct: 564 TAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 147/370 (39%), Gaps = 59/370 (15%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHM 164
P F Y+ +++ + ++ A+ LF EM PD T++TL+ + EG F A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+M V D V Y+ +I L +A+ I + G++PD V+Y
Sbjct: 213 LQKMEQDRVSGDLV--------LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 264
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGE 284
+I+ + + + R+A L EM+ V L + +Y++L++ Y +
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGV--------------LPNTVSYSTLLSVYVENHK 310
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM----- 339
+ L++ EM D +++I+ + K+ AD ++ S+
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKE---------ADRLFWSLRKMDI 361
Query: 340 -PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
PN + Y+T++ E L EA M + + + YN +
Sbjct: 362 EPNVVSYNTILRVYGEAE---------------LFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCN 458
I + + + KA N+ EM G + + +++ G + + + Q LRS
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK-LRSSG 465
Query: 459 LNDSELHKVL 468
+ E+ +VL
Sbjct: 466 V---EIDQVL 472
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE-KGLSPDALSYRYVITGFCNNRCPGKA 94
++ D N+++K H MQ K A+ KG D +Y ++ F
Sbjct: 85 VRWDSHIINRVLKAHPPMQ---KAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSM 141
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
Y M +KG+L D TY+SLI + S + A L++EM P +++T M
Sbjct: 142 YSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKM 201
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+G +A ++ +M+ V SP TY ++ L G+ EEAL I M
Sbjct: 202 LFADGRVEEATEVYKEMLRSRV--------SPNCHTYTVLMEYLVATGKCEEALDIFFKM 253
Query: 212 PEMGLSPDAVSYIIVIS 228
E+G+ PD + I+I+
Sbjct: 254 QEIGVQPDKAACNILIA 270
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F A + + D TY ++ R++ + M EKG+ D ++Y +I
Sbjct: 109 FNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVS 168
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
++ A EM G P +Y++ ++ L + R+ EA +++EML P+
Sbjct: 169 SSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCH 228
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
T+T LM G+ +A + +M GV PD
Sbjct: 229 TYTVLMEYLVATGKCEEALDIFFKMQEIGVQPD 261
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 175/438 (39%), Gaps = 91/438 (20%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSY--RYVITG-FCNNR---- 89
Q+D+ ++N +I + + + + + +L M GL PD ++ ++G C+
Sbjct: 207 QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRM 266
Query: 90 --CPGKAYEFKLEMDQKGIL----------------------PDAFTYSSLIQALCSKRR 125
C F ++M K L D ++ +I L R
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 126 LSEAYHLFQEMLSPPDDIT---FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+A +F EML D++ +++ +C G F +H ++ G D +
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD-----T 381
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
PAL N++I G ++++L I M E D VS+ +ISG+ QN +L KA L
Sbjct: 382 PAL---NSLITMYAKCGHLDKSLVIFERMNE----RDLVSWNAIISGYAQNVDLCKALLL 434
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTY----------------------ASLINAYC 280
EM K V +D T L+Q S +L++ Y
Sbjct: 435 FEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYS 494
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM- 339
G L D +S K D V +LI G + L I ++++++ M
Sbjct: 495 KCGYLEAAQRCFDSISWK----DVVSWGILIAGYGFHGKGDIA----LEIYSEFLHSGME 546
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
PN++I+ ++ +CS+N G+V+ +GL ++ D +E N++ V +LL
Sbjct: 547 PNHVIFLAVLSSCSHN------GMVQ----QGLKIFSSMVRDFGVEPNHEHLACVVDLL- 595
Query: 400 FDHCRRLNVHKAYNMYME 417
CR + A+ Y E
Sbjct: 596 ---CRAKRIEDAFKFYKE 610
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 34/218 (15%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
DL T N +I+ + L+ ++ + + ++ D ++Y +I G R +A E
Sbjct: 150 SDLFTLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRAREL 205
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCL 154
M L D +++SLI EA LF EM++ PD++ + + AC
Sbjct: 206 FDSMP----LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 155 EGEFSKAFHMHHQMIHKGVLPD--FVTGF---------------------SPALFTYNAI 191
G++ K +H K + D TG LFT+NA+
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
I GL G E + R M G+ PD V++I V+ G
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 144/360 (40%), Gaps = 67/360 (18%)
Query: 108 PDAFTYSSLIQALCSKRRLSE--AYHLFQEMLS---PPDDITFTTLMHACCLE--GEFSK 160
P F ++++I+ +C+ S + F EM PPD TF + AC + G+ +
Sbjct: 77 PSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
+H Q + G+L D LFT N +I + ++ AL + P+ D
Sbjct: 136 VKTLHCQALRFGLLSD--------LFTLNTLIRVYSLIAPIDSALQLFDENPQR----DV 183
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYC 280
V+Y ++I G + RE+ +A EL M L D ++ SLI+ Y
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMP------------------LRDLVSWNSLISGYA 225
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK---------AHLLLII 331
+ + L DEM G PD+V +++ L A++ D + L I
Sbjct: 226 QMNHCREAIKLFDEMVALGLKPDNVA---IVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 332 ADYMYTSMPNYI----IYDT---LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
++ T + ++ DT + E CS+ + ++ +M G M+
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 385 EGNYKPDGAVY-NLLI-------FDHCRRL--NVHKAYNMYMEMVRYGFVSHMFSVLALL 434
KPDG + ++L+ D R L + Y++ EM YG ++ + L+
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLI 402
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 129/293 (44%), Gaps = 31/293 (10%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
++ ++ +L T+ +I +V K G + K + PD + + +I+ +
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 92 GKAYEFKLEM--DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ-----EMLSPPDDIT 144
+A++ EM + I PD + +L++A C+ ++ A ++Q + P+
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE--V 646
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+T +++C G++ A ++ M K V PD V ++A+I ++EA
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVF--------FSALIDVAGHAKMLDEA 698
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
GIL+ G+ +SY ++ C ++ +KA EL +++ L
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALEL-----------YEKIKSIKLRP 747
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
+S T +LI A C +L K + DE+ G P+++ S+L+ ++K
Sbjct: 748 TIS---TMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERK 797
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
+++ GIL+ +G+ +SY ++ CN + KA E ++ + P T ++
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 116 LIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LI ALC +L +A E+ + P+ IT++ LM A + +F +F + Q G
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Query: 173 VLPDFV 178
V P+ +
Sbjct: 815 VSPNLI 820
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 135/353 (38%), Gaps = 53/353 (15%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA- 94
+ + N ++K C + R + + + M +G PD SYR ++ GFC +A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 95 ---YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-----SPPDDITFT 146
Y + QKG D Y L+ ALC + +A + ++L +P
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------------------------- 179
H + + + + +G +P +
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGIL-RGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
GF P F Y A + LC G+++EA+ ++ + M + P Y ++I G C + + +
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A +M ++V +++E+TY +L++ C G+ + + +EM K
Sbjct: 388 AVGYLKKMSKQV-------------SCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
P ++I GL R + L +++ M +P ++ L E+
Sbjct: 435 SHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM---VPESSVWKALAES 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 58 KGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE----FKLEMDQKGILPDAFTY 113
+G +L M KG P Y + C GK E EM Q LP Y
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCR---AGKLKEAVSVINKEMMQGHCLPTVGVY 372
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
+ LI+ LC + EA ++M ++ T+ TL+ C +G+F +A + +M+
Sbjct: 373 NVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEML 432
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+ P + TY+ +I GLC + R EA+ L M + P++ + +
Sbjct: 433 --------IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Query: 230 FC 231
C
Sbjct: 485 VC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 135/353 (38%), Gaps = 53/353 (15%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA- 94
+ + N ++K C + R + + + M +G PD SYR ++ GFC +A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 95 ---YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-----SPPDDITFT 146
Y + QKG D Y L+ ALC + +A + ++L +P
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------------------------- 179
H + + + + +G +P +
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGIL-RGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
GF P F Y A + LC G+++EA+ ++ + M + P Y ++I G C + + +
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A +M ++V +++E+TY +L++ C G+ + + +EM K
Sbjct: 388 AVGYLKKMSKQV-------------SCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
P ++I GL R + L +++ M +P ++ L E+
Sbjct: 435 SHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM---VPESSVWKALAES 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 58 KGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE----FKLEMDQKGILPDAFTY 113
+G +L M KG P Y + C GK E EM Q LP Y
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCR---AGKLKEAVSVINKEMMQGHCLPTVGVY 372
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
+ LI+ LC + EA ++M ++ T+ TL+ C +G+F +A + +M+
Sbjct: 373 NVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEML 432
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+ P + TY+ +I GLC + R EA+ L M + P++ + +
Sbjct: 433 --------IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Query: 230 FC 231
C
Sbjct: 485 VC 486
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 27/286 (9%)
Query: 22 GVVCRFTAARNSESIQQDLA--TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
G+ F S DL+ YN++I+ +++E + E G D +Y
Sbjct: 223 GIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYN 282
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
++ F N P KA+E M++ L D TY +I +L RL A+ LFQ+M
Sbjct: 283 NLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKER 342
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P F++L+ + G + ++ +M +G G P+ + ++I
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM--QGF------GHRPSATMFVSLIDSYA 394
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G+++ AL + M + G P+ Y ++I ++ +L A + +M++
Sbjct: 395 KAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF----- 449
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
L TY+ L+ + G++ + + + M++ G P
Sbjct: 450 ---------LPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 32/238 (13%)
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
YN +I L ++E A + E G D +Y ++ F KA+E+ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
++ L D TY +I + G L L +M + P +
Sbjct: 305 EKT--------------DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSV 350
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
S L++ + K R + TSM Y+ S F V L+ S
Sbjct: 351 FSSLVDSMGKAGR---------------LDTSMKVYMEMQGFGHRPSATMF---VSLIDS 392
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
++ G ++ A R D M + ++P+ +Y ++I H + + A ++ +M + GF+
Sbjct: 393 YAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 136/347 (39%), Gaps = 55/347 (15%)
Query: 112 TYSSLIQALCSKRRLSEAYHLF---QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
Y+ +IQ L +L A+ F QE D T+ LM +G KAF ++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
L D T Y II L GR++ A + + M E L P + ++
Sbjct: 305 EKTDSLLDGST--------YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT---YASLINAYCAQGEL 285
+ L + +KV M+ MQG + + SLI++Y G+L
Sbjct: 357 SMGKAGRLDTS--MKVYME---------------MQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYI 343
L L DEM G P+ + +++I ++ K K + + + M + +P
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMII-----ESHAKSGKLEVAMTVFKDMEKAGFLPTPS 454
Query: 344 IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY-NLLIFDH 402
Y L+E + + G V+ A + +++M +P + Y +LL
Sbjct: 455 TYSCLLEMHAGS---------------GQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWV 449
+RL V A + +EM G+ + + L+ ++D + W+
Sbjct: 500 NKRL-VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWL 545
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 154/406 (37%), Gaps = 55/406 (13%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALS---YRYVITGFCNNRC-PGKAYEF 97
TY +IK +C+ +E+ +L M +SP + Y I G + +A +
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCL 154
M + P TY+ +I + ++ L+ EM S P+ T+T L++A
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
EG KA + Q+ G+ PD ++ YNA++ G A I M M
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPD--------VYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G PD SY I++ + + A + EM R G+ ++++
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR---LGIAPTMKSHML----------- 409
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
L++AY ++ K + EMS G PD+ + + ++N
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---------------------- 447
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVG----LVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+Y + + + ++ N + + L+ + G + + E N++P
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 507
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
D + I + R+ K ++ EM+ G + LL+A
Sbjct: 508 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 128/336 (38%), Gaps = 32/336 (9%)
Query: 2 KLLRDSFTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQ 54
++ RD T +T+ M+ ++ + + S + ++ TY ++
Sbjct: 254 RMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG 313
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
EK I + E GL PD Y ++ + P A E M G PD +Y+
Sbjct: 314 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 373
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
++ A S+A +F+EM P + L+ A + +K + +M
Sbjct: 374 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 433
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV PD F N++++ LG+ + IL M + D +Y I+I+ +
Sbjct: 434 GVEPD--------TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
+ L + EL VE+ K D T+ S I AY + K L +
Sbjct: 486 KAGFLERIEELFVELKEK--------------NFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
+EM G PD +L++ + + + + L
Sbjct: 532 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 26/236 (11%)
Query: 99 LEMDQK-GILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCL 154
LEM + GI PD TY+ +I+ LC S +Y + EM P +F ++
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
E +F + + M GV + TYN +I LC + EA ++ G+
Sbjct: 230 EEKFDEVRKVMRMMDEFGV--------HVGVATYNIMIQCLCKRKKSAEAKALIDGVMSC 281
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
+ P++V+Y ++I GFC L +A L M V Y D + Y +
Sbjct: 282 RMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM----------VCNGY----KPDSECYFT 327
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
LI+ C G+ L L E K +P + L+NGL +++ + K + ++
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVV 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 46/224 (20%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILP---------DAF--------- 111
G+ PD +Y +I C + +Y EM++K I P D F
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 112 -----------------TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
TY+ +IQ LC +++ +EA L ++S P+ +T++ L+H
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C E +A ++ M+ G PD S FT +IH LC G E AL + R
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPD-----SECYFT---LIHCLCKGGDFETALILCRES 348
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD 255
E P +++G ++ +A EL + K +D
Sbjct: 349 MEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVD 392
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 154/406 (37%), Gaps = 55/406 (13%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALS---YRYVITGFCNNRC-PGKAYEF 97
TY +IK +C+ +E+ +L M +SP + Y I G + +A +
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCL 154
M + P TY+ +I + ++ L+ EM S P+ T+T L++A
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
EG KA + Q+ G+ PD ++ YNA++ G A I M M
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPD--------VYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G PD SY I++ + + A + EM R G+ ++++
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR---LGIAPTMKSHML----------- 431
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
L++AY ++ K + EMS G PD+ + + ++N
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---------------------- 469
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVG----LVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+Y + + + ++ N + + L+ + G + + E N++P
Sbjct: 470 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 529
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
D + I + R+ K ++ EM+ G + LL+A
Sbjct: 530 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 128/336 (38%), Gaps = 32/336 (9%)
Query: 2 KLLRDSFTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQ 54
++ RD T +T+ M+ ++ + + S + ++ TY ++
Sbjct: 276 RMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG 335
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
EK I + E GL PD Y ++ + P A E M G PD +Y+
Sbjct: 336 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 395
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
++ A S+A +F+EM P + L+ A + +K + +M
Sbjct: 396 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 455
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV PD F N++++ LG+ + IL M + D +Y I+I+ +
Sbjct: 456 GVEPD--------TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
+ L + EL VE+ K D T+ S I AY + K L +
Sbjct: 508 KAGFLERIEELFVELKEK--------------NFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
+EM G PD +L++ + + + + L
Sbjct: 554 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
++D+ ++N +I + + I R M G+ D +S ++ N P +++
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN--LPSESFG 561
Query: 97 FKLE--MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCL 154
+ M + + D ++ S+LI L A ++F+ M + +++ +++ AC
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAACGN 620
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE- 213
G+ + + H+M+ K +G P T+ II C +G V+E + R M E
Sbjct: 621 HGKLKDSLCLFHEMVEK-------SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV---VWG 253
G+ P Y V+ F + L +AYE M VWG
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWG 716
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 30/249 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E I L T+N +I + + + + + +++ M G++ D ++ +I+G +N +
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL----SEAYHLFQEMLSPPDDITFTTL- 148
A + +M G++P+A T S + A CS ++ SE + + +M D + +L
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSA-CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 149 -MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
M++ C G+ A + + +K V +T+N++I G C G +A +
Sbjct: 395 DMYSKC--GKLEDARKVFDSVKNKDV------------YTWNSMITGYCQAGYCGKAYEL 440
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL--KVEMDRKV-----VWGLDEVTYA 260
M + L P+ +++ +ISG+ +N + +A +L ++E D KV W L +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL--IIAG 498
Query: 261 YLMQGLSDE 269
Y+ G DE
Sbjct: 499 YIQNGKKDE 507
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 170/405 (41%), Gaps = 55/405 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+++L T++ +I + R + + R M + G+ PD + ++ G C N +A +
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG-CANCGDVEAGK 201
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSK-RRLSEAYHLFQEMLSPPDDITFTTLMHACCLE 155
+ K + S+ I A+ +K L A F+ M D I + +++ A C
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM-RERDVIAWNSVLLAYCQN 260
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A + +M +G+ SP L T+N +I G LG+ + A+ +++ M G
Sbjct: 261 GKHEEAVELVKEMEKEGI--------SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++ D ++ +ISG N +A ++M RK+ +L + + T S
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQA----LDMFRKM----------FLAGVVPNAVTIMSA 358
Query: 276 INAYCAQGELFKVLTLDDEMS----HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
++A C+ KV+ E+ G + D ++ + L++ K + +D +
Sbjct: 359 VSA-CS---CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK------ 408
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
++D++ N + + ++ + G +A M + N +P+
Sbjct: 409 ------------VFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
+N +I + + + +A +++ M + G V + L+ A
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 27/215 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMH 165
D +T++S+I C +AY LF M P+ IT+ T++ G+ +A +
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+M G + T+N II G G+ +EAL + R M P++V+ +
Sbjct: 477 QRMEKDGKVQRNTA-------TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 226 V---------------ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ I G R L + +K + D + G+ +D
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 271 --TYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
T+ SLI Y G L L ++M +G P+
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 41/310 (13%)
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ---KGILPDAFTYSSLIQALCSKR 124
+K + P+ ++ R +I C G+ E +D+ K LP +SL+ + +
Sbjct: 227 DKRIYPNEITIRIMIQVLCKE---GRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 125 RLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
R+ E+ L + +L D I ++ +++A EG+ A + +M+ +G F
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRG--------F 335
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ--------- 232
S F Y + C G V+EA +L M E G+SP ++ +I GF +
Sbjct: 336 SANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLE 395
Query: 233 ------NRELRKAYELKVEMDRKV-----VWGLDEVTYAYLMQG-LSDEDTYASLINAYC 280
R L + EM + V V +E+ + +G + DE TY+ LI +
Sbjct: 396 YCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFI 455
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
++ + L L EM ++ P + LI GL + + + +L ++ + P
Sbjct: 456 EGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIE---P 512
Query: 341 NYIIYDTLIE 350
N IYD LI+
Sbjct: 513 NADIYDALIK 522
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
Y ++ C V++ +L M E G+SP ++ +I GF K E+ M
Sbjct: 341 VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM 400
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
+G++P ++ +++++ ++ A + + + PD+ T++ L+ +
Sbjct: 401 VTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDI 460
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A + ++M ++ + SP + ++I GLC G+VE L+ M + + P
Sbjct: 461 DQALKLFYEMEYRKM--------SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEP 512
Query: 219 DAVSYIIVISGF 230
+A Y +I F
Sbjct: 513 NADIYDALIKAF 524
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
L M E G+ P L Y +I G+ + KA E EM KG LP+ FTY+S+I+ LC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
EA L +EM S P+ + ++TL+ G+ S+A + +M+ KG
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P + +TTL+ + GE KA M +M KG LP+ +FTYN++I GLC G
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPN--------VFTYNSMIRGLCMAG 773
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
EA +L+ M G +P+ V Y ++ + +L +A ++ EM +K
Sbjct: 774 EFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 34/247 (13%)
Query: 13 KTFRHMVRNGVV-------------CRFTAARNSESIQQDLA--------TYNKIIKQHC 51
+TFR M+R+G V C ++++S L Y+ I+ C
Sbjct: 771 RTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALC 830
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ ++E+ + L + D +Y ++ G KA + M + G P
Sbjct: 831 RIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVH 890
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQM 168
Y+SLI +++L + Q+M P +T+T ++ G+ +A++ M
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+G PDF T Y+ I+ LC + E+AL +L M + G++P +++ V
Sbjct: 951 EERGTSPDFKT--------YSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFY 1002
Query: 229 GFCQNRE 235
G NRE
Sbjct: 1003 GL--NRE 1007
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN--RCPGK 93
I QD T+ +I Q+ + + M + GL P + +++ +IT C R +
Sbjct: 711 ITQD--TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEE 768
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLMHA 151
A EM + G +PD + LC +A + + P + ++ + A
Sbjct: 769 ATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRA 828
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G+ +A + L D +TY +I+HGL G +++AL + M
Sbjct: 829 LCRIGKLEEALSELASFEGERSLLD--------QYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED- 270
E+G P Y +I F + ++L K E M+G S E
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLET-----------------CQKMEGESCEPS 923
Query: 271 --TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY ++I Y + G++ + M +G+ PD S IN L + +++D
Sbjct: 924 VVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSED 977
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 137/336 (40%), Gaps = 60/336 (17%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
++TY +I++ +++ EKG + M E G+ PD+++ V+ G +A++
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP----DDITFTTLMHACCLE 155
M++KGI P +YS ++ LC R E +F +M + DDI F+ ++ +
Sbjct: 493 SMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI-FSWVISSMEKN 551
Query: 156 GEFSK------------------------AFHMHHQMIHKGVLPDFV--TGFSPALFTYN 189
GE K F +++ P V + PAL +
Sbjct: 552 GEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVD 611
Query: 190 AI-IHGLCFL-------GRVEEAL--GILRGMPEM--------GLSPDAV----SYIIVI 227
+ + +C + R +EAL ++ PE+ + +AV S++
Sbjct: 612 KMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKR 671
Query: 228 SGFCQNRELRKAYELKVEMD--RKVVWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGE 284
+G+ N E AY + +++ K + + Y QG L +DT+A +I Y G
Sbjct: 672 NGYKHNSE---AYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGL 728
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGL-DKKAR 319
+ EM G +P S LI L +KK R
Sbjct: 729 TNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGR 764
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 137/362 (37%), Gaps = 56/362 (15%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + G D ++ +I+ + + GK +M + G DA Y+ +I++LC R
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
A ++EM+ ITF + + M I K D V + +
Sbjct: 275 GDLALEFYKEMMEK--GITFGL------------RTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 186 F---------TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
+ ++ C G+++EAL ++R + + DA + I++ G C+ +
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMS 296
A E+ M R+ L D + Y +I+ Y Q ++ K L + +
Sbjct: 381 VDALEIVDIMKRR---------------KLDDSNVYGIIISGYLRQNDVSKALEQFEVIK 425
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
G P + + + HL + + N +++ +IEN +
Sbjct: 426 KSGRPP-------------RVSTYTEIMQHLFKL---KQFEKGCN--LFNEMIENGIEPD 467
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
++ +V + V EA + +M E KP Y++ + + CR + ++
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFN 527
Query: 417 EM 418
+M
Sbjct: 528 QM 529
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 61/331 (18%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR------- 79
F R S + D YN +I+ C+ R + + + M EKG++ +Y+
Sbjct: 247 FEKMRKS-GFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIA 305
Query: 80 ----------------------------YVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
Y++ FC + +A E E+ K + DA
Sbjct: 306 KSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSPP--DDITFTTLMHACCLEGEFSKAFHMHHQMI 169
+ L++ LC R+ +A + M D + ++ + + SKA ++I
Sbjct: 366 YFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALE-QFEVI 424
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
K +G P + TY I+ L L + E+ + M E G+ PD+V+ V++G
Sbjct: 425 KK-------SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAG 477
Query: 230 FCQNRELRKAYELKVEMDRKVV---WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
+ +A+++ M+ K + W +Y+ ++ L Y +I + Q
Sbjct: 478 HLGQNRVAEAWKVFSSMEEKGIKPTWK----SYSIFVKELCRSSRYDEIIKIF-NQMHAS 532
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
K++ DD S VI S+ NG +K
Sbjct: 533 KIVIRDDIFSW-------VISSMEKNGEKEK 556
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 181/449 (40%), Gaps = 88/449 (19%)
Query: 11 TLKTFRHMVR------NGVVC------RFTAARN--SESIQQDLATYNKIIKQHCLMQRV 56
L+ F+ M R NG++ F AR E ++DL ++N +IK + + +
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNL 142
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
K + M E+ D S+ +++G+ N C A M +K + ++++L
Sbjct: 143 GKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNAL 194
Query: 117 IQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHM--HHQMIHKGVL 174
+ A ++ EA LF+ + L+ CL G F K + Q +
Sbjct: 195 LSAYVQNSKMEEACMLFKSREN-------WALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
D V+ +N II G G+++EA + P D ++ ++SG+ QNR
Sbjct: 248 RDVVS--------WNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNR 295
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQG--------LSDE----------DTYASLI 276
+ +A EL +M + +EV++ ++ G ++ E T+ ++I
Sbjct: 296 MVEEARELFDKMPER-----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
Y G++ + L D+M + D V + +I G + + + L L +
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEA---LRLFVQMERE 403
Query: 337 TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
N + + + C++ VV L + H +++G Y+ V N
Sbjct: 404 GGRLNRSSFSSALSTCAD-----VVAL----------ELGKQLHGRLVKGGYETGCFVGN 448
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
L+ +C+ ++ +A +++ EM VS
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 47/211 (22%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN------ 88
+I D +Y +IK +C + EK + I+R M KG+ +++ ++ N
Sbjct: 169 NITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEA 228
Query: 89 ----------------------------RCPGKAYEFKLEMDQKGILPDAFTYSSLIQAL 120
P + E EM G+ PD +Y+ L+ A
Sbjct: 229 ESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAY 288
Query: 121 CSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQ--MIHKGVLPDFV 178
C K +SEA ++ E L P+ TF TL+ C+ G + + + + ++HK +PDF
Sbjct: 289 CVKGMMSEAKKVY-EGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK--IPDFK 345
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
T + GL R+E+A G+ R
Sbjct: 346 TC--------KHLTEGLVKNNRMEDARGVAR 368
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
++PD +SY +I +C++ P KA E +M+ KG+ +++++ +L + EA
Sbjct: 169 NITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEA 228
Query: 130 YHLFQEMLSPPDDITFTT----LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L+ EM++ D+ T LM+A E K + +M G+ PD V
Sbjct: 229 ESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVK--ELMEEMSSVGLKPDTV------- 279
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+YN ++ C G + EA + G+ + P+A ++ +I C N
Sbjct: 280 -SYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCIN 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 142/361 (39%), Gaps = 44/361 (12%)
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE-----FKLEMDQKGIL 107
+Q +K + I + ++ SP LS RY + + + + + I
Sbjct: 43 VQDPDKALAIYKSVSNNSTSP--LSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIK 100
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHM 164
+ F S+LI++ A +F+EM +P ++F L+ AC F + +
Sbjct: 101 TETF-LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQL 159
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+ P +P +Y +I C G+ E+A+ I+R M G+ +++
Sbjct: 160 FDE------FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFT 213
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY---------------AYLMQGLS-- 267
++ +N + +A L +EM K LD Y LM+ +S
Sbjct: 214 TILGSLYKNGLVDEAESLWIEMVNKGC-DLDNTVYNVRLMNAAKESPERVKELMEEMSSV 272
Query: 268 ----DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP-DSVIDSLLINGLDKKARTKD 322
D +Y L+ AYC +G + + + + + + ++I L INGL + T
Sbjct: 273 GLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVF 332
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
K+ ++ I D+ + + L++N + + V +VK LV E + +
Sbjct: 333 KKSAIVHKIPDFKTCKH----LTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEK 388
Query: 383 M 383
+
Sbjct: 389 L 389
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 48/266 (18%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
++++LI L A LF +M D + + +M G+ + A + +M HK
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
V+ T+ +IHG C + ++ A + MPE L VS+ +I G+C
Sbjct: 206 TVI------------TWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTMIGGYC 249
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA------------------ 273
QN++ ++ L EM D+VT ++ +SD +
Sbjct: 250 QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKV 309
Query: 274 ----SLINAYCAQGELFKVLTLDDEMSHKG-SLPDSVIDSLLINGLDKKARTKDTKAHLL 328
++++ Y GE+ K + DEM K + +++I +NG + +A L
Sbjct: 310 KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG--------NARAALD 361
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSN 354
L + M P+ I +I C++
Sbjct: 362 LFVT-MMIEEKPDEITMLAVITACNH 386
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 164/416 (39%), Gaps = 81/416 (19%)
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTT 147
G Y KL DQ+ D+F +S+I+A R+ +++ L++++ PD+ TFTT
Sbjct: 25 GIGYARKL-FDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTT 83
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------------GFSPALF------- 186
L +C L + +H Q+ G D G + F
Sbjct: 84 LTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRS 143
Query: 187 --TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
++ A+I G G ++ A + MP + D V Y ++ GF ++ ++ A L
Sbjct: 144 EVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFD 200
Query: 245 EMDRKVVWGLDEVTYAYLMQG---LSDED---------------TYASLINAYCAQGELF 286
EM K V +T+ ++ G + D D ++ ++I YC +
Sbjct: 201 EMTHKTV-----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 287 KVLTLDDEMSHKGSL-PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
+ + L EM SL PD V T +L I+D S+ + +
Sbjct: 256 EGIRLFQEMQATTSLDPDDV-----------------TILSVLPAISDTGALSLGEW-CH 297
Query: 346 DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
+ + + K ++ +S G + +A R D M E A +N +I +
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV----ASWNAMIHGYALN 353
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE-RSWVIQNTLRSCNLN 460
N A ++++ M+ + ++LA++TA G+ E R W + +R LN
Sbjct: 354 GNARAALDLFVTMMIEEKPDEI-TMLAVITACNHGGLVEEGRKWF--HVMREMGLN 406
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 51/242 (21%)
Query: 116 LIQALCSKRRLSEAYHLFQEML-------------------------SPPDDITFTTLMH 150
L+ ALCSKR+ EA L E+ +P D + + +
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPD--------FVTGFSPALFTYNAIIHGLCFLGRVE 202
C E E + M Q++ + L V G SP T NA + C G V+
Sbjct: 352 GC--ELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVD 409
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE-LKVEMDRKVVWGLDEVTYAY 261
EAL + R E+G +P A+SY +I C N + +AY+ LK +DR +
Sbjct: 410 EALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDR-----------GH 458
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+ G T+++L NA C +G+ L + + LP + +I+ L + +
Sbjct: 459 FLGG----KTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVE 514
Query: 322 DT 323
D
Sbjct: 515 DA 516
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + ++ YN ++ Q ++ IL M +G+SP+ + + FC +
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMH 150
A E + G P A +Y+ LI LC+ + +AY + + + + TF+TL +
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
A C +G+ A + + +LP + G II LC +G+VE+AL I
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCK--------IISALCDVGKVEDALMI 519
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 27 FTAARNSESIQQDL--ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG 84
F +R ES + L A Y+ I + + R ++ I + M G PD ++Y ++ G
Sbjct: 355 FRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFG 414
Query: 85 FCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT 144
C + +A +M+ +G PD T++ LIQ C L +A F ML DI
Sbjct: 415 LCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDID 474
Query: 145 ---FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV 201
L+ + +F A +M+ P TY +I L + +
Sbjct: 475 SNLLDVLIDGFVIHNKFEGASIFLMEMVKNA-------NVKPWQSTYKLLIDKLLKIKKS 527
Query: 202 EEALGILRGM 211
EEAL +L+ M
Sbjct: 528 EEALDLLQMM 537
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G+ P TY+ ++ GLC R+EEA G+L M G PD ++ I+I G C+N EL K
Sbjct: 399 AGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDK 458
Query: 239 A 239
A
Sbjct: 459 A 459
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 21/217 (9%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEF- 158
EM G D TY + + R ++E L++ M+ P F + C L +
Sbjct: 288 EMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGP----FKPSIQDCSLLLRYL 343
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
S + + ++ + TG S + Y+ I L +GR +EA I + M G P
Sbjct: 344 SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEP 403
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYASLIN 277
D ++Y ++ G C+ + L +A + +M+ QG D T+ LI
Sbjct: 404 DNITYSQLVFGLCKAKRLEEARGVLDQME---------------AQGCFPDIKTWTILIQ 448
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+C EL K L M KG DS + +LI+G
Sbjct: 449 GHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 42/288 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ T+ +I C + R + I+ M+ G+ ++Y +I G+ GKA
Sbjct: 212 KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY------GKAGM 265
Query: 97 FK------LEMDQKG-ILPDAFTYSSLIQALCSKR---RLSEAYHLFQEMLSPPDDITFT 146
F+ +M + G LPD T +S+I + + R ++ Y FQ M PD TF
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG--FSPALFTYNAIIHGLCFLGRVEEA 204
L+ + F KA M+ +M + DF+ FS TYN +I GR+E+
Sbjct: 326 ILILS------FGKA-GMYKKMCS---VMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+ R M G+ P++++Y +++ + + +K++ + + D V
Sbjct: 376 DDVFRKMKYQGVKPNSITYCSLVNAYS-----KAGLVVKIDSVLRQIVNSDVVL------ 424
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
D + +INAY G+L + L +M + PD + + +I
Sbjct: 425 ---DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIK 469
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 133/356 (37%), Gaps = 58/356 (16%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
P +Y + N + P +A M +G+ P Y+SLI L +A+
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 133 FQEMLS----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+ M S PD TFT L+ CC G F + +M + GV + TY
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV--------GCSTVTY 253
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLS-PDAVSYIIVISGFCQNRELRKAYELKVEMD 247
N II G G EE +L M E G S PD + +I + R +RK ++
Sbjct: 254 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK---MESWYS 310
Query: 248 RKVVWGL--DEVTYAYLMQGLSDED----------------------TYASLINAYCAQG 283
R + G+ D T+ L+ TY +I + G
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI 343
+ K+ + +M ++G P+S+ L+N +KA L++ I + + + +
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAY--------SKAGLVVKIDSVLRQIVNSDV 422
Query: 344 IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
+ DT NC ++ ++ G + + M E KPD + +I
Sbjct: 423 VLDTPFFNC----------IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 127/323 (39%), Gaps = 45/323 (13%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
+D++ K+I C E + R + E PD + + + G+ P + +
Sbjct: 58 EDVSFVAKLI-NFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSL 116
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEA--YHLFQEMLSPPDDI-TFTTL--MHAC 152
+E+ + GILPD +T+ SL++A + L E H L D++ TL M+
Sbjct: 117 FVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTE 176
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + ++ F P + YNA+I G R EAL + R M
Sbjct: 177 CEDVDSARCV--------------FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 213 EMGLSPDAVSYIIVIS---------------------GFCQNRELRKAYELKVEMDRKVV 251
L P+ ++ + V+S FC+ ++ A ++M K
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL---IDMFAK-C 278
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
LD+ + D ++++I AY G+ K + + + M + PD + L+
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 312 NGLDKKARTKDTKAHLLLIIADY 334
N R ++ + + +++ +
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKF 361
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG--K 93
++ + +T+ +I C + V+ ++R M++ + D Y +++ C ++
Sbjct: 175 VRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFD 234
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
+ ++ + P Y+ +++ L R E + +M PD + +T ++
Sbjct: 235 VIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQ 294
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ ++ KA + +++ G+ PD ++TYN I+GLC +E AL ++
Sbjct: 295 GVIADEDYPKADKLFDELLLLGLAPD--------VYTYNVYINGLCKQNDIEGALKMMSS 346
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M ++G P+ V+Y I+I + +L +A L EM+ G++ ++ + +
Sbjct: 347 MNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETN---GVNRNSHTFDIMI----S 399
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
Y + CA G L + ++ + K S + VI L GL +A
Sbjct: 400 AYIEVDEVVCAHGLLEEAFNMN--VFVKSSRIEEVISRLCEKGLMDQA 445
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 11/190 (5%)
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
GV +L M +KGL P + V+ A + M G P +Y +L+
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 119 ALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
AL + EA+ ++ M+ P+ +TT+ + +F+ + +M KG+
Sbjct: 502 ALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI-- 559
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ T+NA+I G G A M + P+ ++Y ++I + +
Sbjct: 560 ------EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK 613
Query: 236 LRKAYELKVE 245
R AYEL V+
Sbjct: 614 PRLAYELHVK 623
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 109/264 (41%), Gaps = 37/264 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q+++ ++ ++ + R E+ V I M G+ PD + I+ N + +
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEG 156
F + G++ +SL+ + ++ LF EM + D +++T ++ A G
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFG 451
Query: 157 EFSKAFHMHHQMIHKGVLPDFVT----------------------------GFSPALFTY 188
+ + +M+ G+ PD VT G P++ Y
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR---ELRK-AYELKV 244
+ +I GR+EEA+ + GMP PDA+ + ++S C+N+ E+ K A E +
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSA-CRNKGNLEIGKWAAESLI 567
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSD 268
E+D G ++ Y +G D
Sbjct: 568 ELDPHHPAGYTLLSSIYASKGKWD 591
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 147/392 (37%), Gaps = 68/392 (17%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
++ YN ++ +E + + RGM + D++S+ +I G N +A E
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE 157
EM +G+ D + + S++ A ++E + HAC +
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI-----------------HACIIRTN 300
Query: 158 FSKAFHMHHQMIHK----GVLPDFVTGF----SPALFTYNAIIHGLCFLGRVEEALGILR 209
F ++ +I L T F + ++ A++ G GR EEA+ I
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYE-------------LKVEMDRKVVWG--- 253
M G+ PD + IS L + + + V ++G
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 254 -LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
+D+ T + + D ++ ++++AY G + + L D+M G PD V + +I+
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
+ + + + L+ ++ Y +P+ Y +I+ FS G
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSE--YGIVPSIGHYSCMID---------------LFSRSGR 523
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+ EA R + M + PD + L+ CR
Sbjct: 524 LEEAMRFINGM---PFPPDAIGWTTLL-SACR 551
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 45/294 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYEF 97
++ T N+ ++ C + VE+ + + E + PD ++YR +I GFC+ A +
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIKLKE-FIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP----DDITFTTLMHACC 153
L MD+ G D +++ L K + EA +F M+S D + ++ C
Sbjct: 239 NLMMDE-GFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLC 297
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G A + +M +GV D + T+ ++I+GL RV EA G++ G+
Sbjct: 298 KNGRIDMARKVFDEMRERGVYVDNL--------TWASLIYGLLVKRRVVEAYGLVEGVE- 348
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+PD Y +I G + + +A E+ +M ++ G + + + YLM
Sbjct: 349 ---NPDISIYHGLIKGLVKIKRASEATEVFRKMIQR---GCEPIMHTYLM---------- 392
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
QG L KG P D++ + G+ K + +T ++
Sbjct: 393 ------LLQGHL-------GRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYI 433
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 125/327 (38%), Gaps = 61/327 (18%)
Query: 108 PDAFTYSS-----LIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLMHACCLEGEFSK 160
PD FT++S ++ + + R + + L QE+ +D TF ++ E K
Sbjct: 106 PD-FTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKK 164
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
+ H M G L + + T N + LC VEEA + + E + PD
Sbjct: 165 CVNYFHLMNGFGYLYN--------VETMNRGVETLCKEKLVEEAKFVFIKLKEF-IKPDE 215
Query: 221 VSYIIVISGFCQ-----------NRELRKAYELKVEMDRKVVWGL------DEVTYAYLM 263
++Y +I GFC N + + +++ +E +K++ L DE + + +
Sbjct: 216 ITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYV 275
Query: 264 Q-----GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
G D Y +I+ C G + + DEM +G D++ + LI GL K
Sbjct: 276 MVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKR 335
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
R ++ Y L+E N + GL+K +EA
Sbjct: 336 R----------VVEAY------------GLVEGVENPDISIYHGLIKGLVKIKRASEATE 373
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRR 405
M++ +P Y +L+ H R
Sbjct: 374 VFRKMIQRGCEPIMHTYLMLLQGHLGR 400
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFH 163
P FT +++I A+ +R SE+ LFQ P+ +++ +++A C EG +A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
++ ++ F+P+ TY + GL GR+ +A +LR M G + D+ Y
Sbjct: 238 VYRHILANAP-------FAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVY 290
Query: 224 IIVISGFCQNRELRKAYELKVEMDRK 249
+I G+ + KA E E+ K
Sbjct: 291 NNLIRGYLDLGDFDKAVEFFDELKSK 316
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 171/446 (38%), Gaps = 67/446 (15%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQ------------QDLATYNKIIKQ 49
KL R S + + + + A R SESI ++ +YN+II
Sbjct: 166 KLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINA 225
Query: 50 HCLMQRVEKGVGILRG-MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILP 108
HC V++ + + R +A +P +++YR++ G G A EM KG
Sbjct: 226 HCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAA 285
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMH 165
D+ Y++LI+ +A F E+ S D I T M +G +A +
Sbjct: 286 DSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESY 345
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
++ K TG N ++ G+ +EA + M + P+ +S
Sbjct: 346 RSLLDKKFRMHPPTG--------NVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNS 397
Query: 226 VISGFCQNRELRKAYELKVEMD--RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG 283
G N E K E ++ +KV G + ++M L Y +++ +C QG
Sbjct: 398 DTVGIMVN-ECFKMGEFSEAINTFKKV--GSKVTSKPFVMDYLG----YCNIVTRFCEQG 450
Query: 284 ELFKVLTLDDEMSHKGSLP-DSVIDSLLINGLDKKARTKDTKAHL-------LLIIADYM 335
L + E + SLP D+ +I+ K R D L L ++AD+
Sbjct: 451 MLTEAERFFAEGVSR-SLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADF- 508
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
++ LI+N G + E+A M E KPD ++Y
Sbjct: 509 -----GARVFGELIKN-------------------GKLTESAEVLTKMGEREPKPDPSIY 544
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRY 421
++++ C + +A ++ EM+R+
Sbjct: 545 DVVVRGLCDGDALDQAKDIVGEMIRH 570
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 33/248 (13%)
Query: 76 LSYRYVITGFCNNRCPGKAYEFKL---EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
S+ ++ FC+ G K+ M +G P+ + +++ C +SEA+ +
Sbjct: 175 FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQV 234
Query: 133 FQEMLSPPDDIT---FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
M+ ++ ++ L+ GE KA + ++MI G SP L TY
Sbjct: 235 VGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQ--------IGCSPNLVTYT 286
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
++I G LG V+EA +L + GL+PD V ++I + + +A RK
Sbjct: 287 SLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA--------RK 338
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK-GSLPDSVIDS 308
V L++ + + D+ T+AS++++ C G+ L ++H G+ D V +
Sbjct: 339 VFTSLEK------RKLVPDQYTFASILSSLCLSGK----FDLVPRITHGIGTDFDLVTGN 388
Query: 309 LLINGLDK 316
LL N K
Sbjct: 389 LLSNCFSK 396
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 169/419 (40%), Gaps = 65/419 (15%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + + +I++ C V + ++ M G+S + +++GF + P K
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQK 265
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + +M Q G P+ TY+SLI+ + EA+ + ++ S PD + ++H
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G F +A + + + ++PD +T+ +I+ LC G+ + I G
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPD--------QYTFASILSSLCLSGKFDLVPRITHG 377
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+G D V+ ++ + C ++ +Y LKV L ++Y D
Sbjct: 378 ---IGTDFDLVTGNLLSN--CFSKIGYNSYALKV---------LSIMSYKDFAL---DCY 420
Query: 271 TYASLINAYCAQG------ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
TY ++A C G +++K++ + ++ ++IDSL+ G +T
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKII-IKEKKHLDAHFHSAIIDSLIELG------KYNTA 473
Query: 325 AHLL--LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
HL I+ Y P ++ T+ ++ GLV++ + EA
Sbjct: 474 VHLFKRCILEKY-----PLDVVSYTV----------AIKGLVRA----KRIEEAYSLCCD 514
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF---VSHMFSVLALLTALR 438
M EG P+ Y +I C+ K + E ++ G + F V +LL+ R
Sbjct: 515 MKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYR 573
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 54/261 (20%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G+ DA+S+ I FC AY EM++ G+ PD TY++LI AL
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK------- 224
Query: 130 YHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
H C+ G + + M+ KG P+ L T+N
Sbjct: 225 --------------------HERCVIGN-----GLWNLMVLKGCKPN--------LTTFN 251
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
I L R +A +L MP++ + PD+++Y +VI GF R +M +
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF--------PDMAER 303
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
V + Y + Y ++I+ C G T+ + K P+ +
Sbjct: 304 VYTAMHGKGYK------PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 310 LINGLDKKARTKDTKAHLLLI 330
L+ GL KK + K+ + L+
Sbjct: 358 LLKGLVKKGQLDQAKSIMELV 378
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG-FCNN 88
A + I D ++N IK C + ++ +R M + GL+PD ++Y +I+ + +
Sbjct: 167 APSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHE 226
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDI 143
RC + L M KG P+ T++ IQ L ++RR +A L +L P PD I
Sbjct: 227 RCVIGNGLWNL-MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLL--LLMPKLQVEPDSI 283
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
T+ ++ L A ++ M K G+ P L Y +IH LC G +
Sbjct: 284 TYNMVIKGFFLARFPDMAERVYTAMHGK--------GYKPNLKIYQTMIHYLCKAGNFDL 335
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
A + + P+ + +++ G + +L +A + + R+V
Sbjct: 336 AYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRV 382
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 142/370 (38%), Gaps = 45/370 (12%)
Query: 87 NNRCPGKAYE-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITF 145
+ R P K Y FK + ++ + F + + L RL L + + P
Sbjct: 47 SERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRRE 106
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
++ L G+ M Q + D + G ++ ++NA + L F +
Sbjct: 107 GFIVRIIMLYGKAG----MTKQALDTFFNMD-LYGCKRSVKSFNAALQVLSFNPDLHTIW 161
Query: 206 GILRGMP-EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYL 262
L P + G+ DAVS+ I I FC+ L AY EM++ GL D VTY L
Sbjct: 162 EFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKS---GLTPDVVTYTTL 218
Query: 263 MQGLSDEDTYASLINAYCAQGE-LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+ L + C G L+ ++ L KG P+ ++ I L + R
Sbjct: 219 ISALYKHER--------CVIGNGLWNLMVL------KGCKPNLTTFNVRIQFLVNRRRAW 264
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
D LLL+ P+ I Y+ +I K F + + A R +
Sbjct: 265 DANDLLLLMPK---LQVEPDSITYNMVI---------------KGFFLARFPDMAERVYT 306
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
M YKP+ +Y +I C+ N AY M + +R + ++ +V LL L G
Sbjct: 307 AMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKG 366
Query: 442 MYNERSWVIQ 451
++ +++
Sbjct: 367 QLDQAKSIME 376
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 7 SFTATLKTFRHM-VRNGVVCRFTAARNSES--IQQDLATYNKIIKQHCLMQRVEKGVGIL 63
SF +K+F + + +G + A R E + D+ TY +I +R G G+
Sbjct: 179 SFNIAIKSFCELGILDGA---YMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
M KG P+ ++ I N R A + L M + + PD+ TY+ +I+
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
R A ++ M P+ + T++H C G F A+ M + K
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK--------K 347
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ P L T ++ GL G++++A I+
Sbjct: 348 WYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D++S+ +ITG + +AYE +M K D +++ +I+ K +S+ LF
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF 395
Query: 134 QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI-- 191
M+ D+IT+T ++ A G + +A H+M+ K V P+ T FS L ++
Sbjct: 396 G-MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT-FSSVLSATASLAD 453
Query: 192 ------IHG--------------------LCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
IHG C G +A I + E P+ VSY
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNT 509
Query: 226 VISGFCQNRELRKAYEL 242
+ISG+ N +KA +L
Sbjct: 510 MISGYSYNGFGKKALKL 526
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 20/234 (8%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALS-YRYVITGFCNNRCPGK 93
S QD T II C V++ +G++ + +S + LS YR ++ G+ R +
Sbjct: 168 SCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDV-ISGNELSVYRSLLFGWSVQRNVKE 226
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKR-------RLSEAYHLFQEMLS---PPDDI 143
A +M GI PD F ++SL+ LC + + EA ++ EM S P +
Sbjct: 227 ARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSM 286
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
++ L+ ++ + QM G PD TG +Y ++ L GR +
Sbjct: 287 SYNILLSCLGRTRRVRESCQILEQMKRSGCDPD--TG------SYYFVVRVLYLTGRFGK 338
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
I+ M E G P+ Y +I C + A +L +M R V G +V
Sbjct: 339 GNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQV 392
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY---HLFQEMLSPPDDITFTTLMHACC 153
FK+ +D+ D FT +++I ALCS+ + A H ++++S + + +L+
Sbjct: 161 FKI-LDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWS 219
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL-------GRVEEALG 206
++ +A + M G+ PD LF +N+++ LC G V EAL
Sbjct: 220 VQRNVKEARRVIQDMKSAGITPD--------LFCFNSLLTCLCERNVNRNPSGLVPEALN 271
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
I+ M + P ++SY I++S + R +R++ ++ +M R G D
Sbjct: 272 IMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRS---GCD----------- 317
Query: 267 SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
D +Y ++ G K + DEM +G P+
Sbjct: 318 PDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPE 354
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 44/297 (14%)
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
M + + +GI R + ++ DA+S+ VI + + +A+E +M G+ T
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMI 169
++ + A L M + P D + + AC L G +H I
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 170 HKG------VLPDFVTGFSP-----------------ALFTYNAIIHGLCFLGRVEEALG 206
H V +T +S +L T+N+II G L + EEA
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL-------KVEMDRKVVWGLDEVTY 259
+LR M G P++++ ++ + L+ E K D ++W Y
Sbjct: 368 LLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 260 AYL-----------MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
A + DE TY SLI+ Y QGE L L EM+ G PD V
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHV 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 158/415 (38%), Gaps = 37/415 (8%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT--GFCNNRCPGKAYEFKLE 100
+N +I + + E+ + + M KG+ PDA +Y V+ G + G+ +E
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSK 160
+ + ++LI R + A LF M D +++ +++ EG +S+
Sbjct: 172 VSSYK--SSLYVCNALISMYKRFRNMGIARRLFDRMFE-RDAVSWNAVINCYASEGMWSE 228
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
AF + +M + +G ++ T+N I G G ALG++ M S D
Sbjct: 229 AFELFDKM--------WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI---- 276
V+ II + +R E+ G+D V + +D +LI
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 277 ---NAYCAQGEL---FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
N+ C + + L +E SH ++ +L+ G + T + L
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASH-------LLREMLVAGFQPNSITLASILPLCAR 393
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
IA+ + + I L C + LV ++ G + A + D M K
Sbjct: 394 IANLQHGKEFHCYI---LRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM----SKR 446
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
D Y LI + + A ++ EM R G +V+A+L+A + +E
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHE 501
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 177/431 (41%), Gaps = 59/431 (13%)
Query: 34 ESIQQ-DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++IQ+ +L +N + + H L + + M GL P++ ++ +V+ ++
Sbjct: 92 KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI-TFTTLMHA 151
+ + + + G D + ++SLI RL +A+ +F + SP D+ ++T L+
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK--SPHRDVVSYTALIKG 209
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
G A + ++ K V+ ++NA+I G G +EAL + + M
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVV------------SWNAMISGYAETGNYKEALELFKDM 257
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
+ + PD + + V+S Q+ +E+ R+V +D+ + S+
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGS--------IELGRQVHLWIDDHGFG------SNLKI 303
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+LI+ Y GEL L + + +K D + + LI G K+ LLL
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEA---LLLFQ 356
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEF------------KSVVGLVKSFSMR-GLVNEAAR 378
PN + +++ C++ K + G+ + S+R L++ A+
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 379 AHDTMLEGNYKPDGAV-------YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
D +E ++ ++ +N +IF +++++ M + G + +
Sbjct: 417 CGD--IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 432 ALLTALRDHGM 442
LL+A GM
Sbjct: 475 GLLSACSHSGM 485
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + ++ T+N II +V++ + M G+ P+ +S+ ++ G N C +
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTL----- 148
A F +M + G+ P+AF+ + + A L + ++ + ++
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 149 -MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
M+A C G+ +KA + F + L NA+I G ++EA+ +
Sbjct: 590 DMYAKC--GDINKAEKV------------FGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
R + +GL PD ++ V+S ++ +A E+ D V+ + L
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT----------DIVSKRSMKPCL- 684
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+ Y +++ + GE K L L +EM K PD+ + L+ +K+ +T+
Sbjct: 685 --EHYGLMVDLLASAGETEKALRLIEEMPFK---PDARMIQSLVASCNKQRKTE 733
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 163/422 (38%), Gaps = 71/422 (16%)
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
+ R GV I G L+Y Y + NR P A EM + PD
Sbjct: 181 LGRCFHGVVITHGFEWNHFISSTLAYLYGV-----NREPVDARRVFDEMPE----PDVIC 231
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+++++ A EA LF M PD TF T++ AC + +H ++
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
I G+ + V +L ++G C G V EA + GM + ++VS+ ++
Sbjct: 292 ITNGIGSNVVV--ESSLLD----MYGKC--GSVREARQVFNGMSK----KNSVSWSALLG 339
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
G+CQN E KA E+ EM+ K D + +++ A +
Sbjct: 340 GYCQNGEHEKAIEIFREMEEK------------------DLYCFGTVLKACAGLAAVRLG 381
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTL 348
+ + +G + +++S LI+ L K+ D+ + + Y S+ N I ++ +
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALID-LYGKSGCIDSASRV------YSKMSIRNMITWNAM 434
Query: 349 IENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN- 407
+ + N G EA + M++ KPD + + I C
Sbjct: 435 LSALAQN---------------GRGEEAVSFFNDMVKKGIKPDYISF-IAILTACGHTGM 478
Query: 408 VHKAYNMYMEMVR-YGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHK 466
V + N ++ M + YG ++ L G++ E +++ R+ ND+ L
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE---RAECRNDASLWG 535
Query: 467 VL 468
VL
Sbjct: 536 VL 537
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PD +SY +I +C++ P KA E +M KG+ +++++ +L K L A +L
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 133 FQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
+ EM+ D+ + + + E + + +M G+ PD + +YN
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTI--------SYN 282
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
++ C G ++EA + G+ +P+A ++ +I C +R + Y +
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 45/211 (21%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF---------- 85
I D +Y +IK +C EK + I+R M KG+ +++ +++
Sbjct: 170 IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229
Query: 86 ------------------------CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
P + E EM G+ PD +Y+ L+ A C
Sbjct: 230 NLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC 289
Query: 122 SKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
+ L EA +++ + P+ TF TL+ C + + + + + ++ +PDF
Sbjct: 290 ERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFN 349
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
T ++ GL + ++A G++R
Sbjct: 350 --------TLKHLVVGLVENKKRDDAKGLIR 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 52/338 (15%)
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSS--LIQALCSKRRLSEAYHLFQEMLSPP---DDITF 145
P KA + + P + Y+ ++ L RR S+ L + + P ++ +
Sbjct: 46 PDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFY 105
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+TL+ + F+ A QM G P F+ L NA +H F ++
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGT-PRSAVSFNALL---NACLHSKNF----DKVP 157
Query: 206 GILRGMPEM--GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
+ +P+ + PD +SY I+I +C + KA E+ +M K G++ T A
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGK---GMEVTTIA--- 211
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA--RTK 321
+ +++++ +GEL L +EM KG D+ ++ I K++ R K
Sbjct: 212 --------FTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVK 263
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
+ LI P+ I Y+ L+ ++ RG+++EA + ++
Sbjct: 264 E------LIEEMSSMGLKPDTISYNYLM---------------TAYCERGMLDEAKKVYE 302
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ N P+ A + LIF C + Y ++ + V
Sbjct: 303 GLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 29/206 (14%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
++ ++L T+N +I + R E G+ + R M E+G+ P++ + G
Sbjct: 244 TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCL 154
+ + + + D +SLI C L +A+ LF E++ D + + ++
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF-EVMKKKDVVAWNAMISGYAQ 362
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVT----------------------------GFSPALF 186
G KA + +MI + PD++T P
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMP 212
Y ++ L G++EEAL ++R MP
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMP 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 43/261 (16%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PD SY +++ + N KA F M K DA +++++I + + +A L
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKAREL 177
Query: 133 FQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP--DFVTGFSPA------ 184
F M+ +++++ ++ G+ KA H +GV+ +TG+ A
Sbjct: 178 FYSMMEK-NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 185 ------------LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
L T+NA+I G R E+ L + R M E G+ P++ + G +
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
L+ ++ + + + +D SLI+ YC GEL L
Sbjct: 297 LSALQLGRQIHQIVSKSTL--------------CNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 293 DEMSHKGSLPDSVIDSLLING 313
+ M K D V + +I+G
Sbjct: 343 EVMKKK----DVVAWNAMISG 359
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/351 (18%), Positives = 137/351 (39%), Gaps = 49/351 (13%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA-FTYS 114
+E+ V + + M +G++P +++ ++ +F ++ ++G + +
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
SL+ + R ++EA LF E+ SP + +T +M G + +A + +M H GVL
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
PD T+ ++ L + E I + + D ++ +I + +
Sbjct: 730 PDQA--------TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCG 781
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
+++ + ++ EM R+ S+ ++ SLIN Y G L + D
Sbjct: 782 DMKGSSQVFDEMRRR-----------------SNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN 354
M +PD + ++ + D + ++I Y + ++
Sbjct: 825 MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH------------ 872
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG-NYKPDGAVYNLLIFDHCR 404
V +V G + EA D +E N KPD +++ L+ CR
Sbjct: 873 -----VACMVDLLGRWGYLQEA----DDFIEAQNLKPDARLWSSLL-GACR 913
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 182/422 (43%), Gaps = 48/422 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E +++D ++ ++ + + G +L GM + + ++Y +I+G+ N +
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQE 269
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS-----EAYHLFQEMLSPPDDITFTTL 148
A E M GI D FTY S+I+A + L AY L +E S D + +L
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSL 329
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C G+F +A + +M K L ++NA++ G G + EA I
Sbjct: 330 YYKC---GKFDEARAIFEKMPAKD------------LVSWNALLSGYVSSGHIGEAKLIF 374
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ M E + +S++I+ISG +N + +L M R+ G + YA+ S
Sbjct: 375 KEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKRE---GFEPCDYAF-----SG 422
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK------- 321
+++ AYC G+ + L S +++I G+ ++AR
Sbjct: 423 AIKSCAVLGAYC-NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL 481
Query: 322 DTKAHLLLIIADYMYTSMPNYI-IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
D+ + LI A + + +Y+ +++ + +++ ++ + S GLV++ +
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 381 DTMLEGNYKPDGAV-YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
D+M P GA Y LI CR A ++ +E + + + ++ ALL+ R
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESV-IESLPFKPTAEIWE--ALLSGCRV 598
Query: 440 HG 441
HG
Sbjct: 599 HG 600
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M ++GL+P Y ++ C +A + +++++G+ PD+ TY+S+I+ LC +
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L A ++ M+S T T HA F K + QM ++ P
Sbjct: 380 LDVARNVLATMISENLSPTVDTF-HAFLEAVNFEKTLEVLGQMK--------ISDLGPTE 430
Query: 186 FTYNAIIHGLCFLGRV-EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
T+ +I G F G+ E AL I M + + Y+ I G L KA E+
Sbjct: 431 ETF-LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYS 489
Query: 245 EMDRK 249
EM K
Sbjct: 490 EMKSK 494
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 38/295 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
++D+ +YN II + E + ++R M L PD+ + V+ F K E
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEG 156
+ +KGI D + SSL+ R+ ++ +F + D I++ +L+ G
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC-RDGISWNSLVAGYVQNG 322
Query: 157 EFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYN 189
+++A + QM+ V P V GF +F +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
A++ G ++ A I M + D VS+ +I G + +A L EM R+
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLIN-AYCAQGELFKVLTLDDEMSHKGSLPD 303
V ++V + ++ S + L++ A+ + KV L+ E+ H ++ D
Sbjct: 439 GV-KPNQVAFVAVLTACS----HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 126/328 (38%), Gaps = 69/328 (21%)
Query: 138 SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL-----------------PD---- 176
+ PD+ F +L+HAC + + H+H Q++ +GVL PD
Sbjct: 25 ASPDESHFISLIHAC---KDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLS 81
Query: 177 -FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
F F NA+I GL R E ++ M +G+ PD +++ V
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFV--------- 132
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA--SLINAYCAQGELFKVLTLDD 293
LK W L +A ++ D D++ SL++ Y G+L + +
Sbjct: 133 ------LKSNSKLGFRW-LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFE 185
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCS 353
E + +I ++LING R KD + +A ++ SMP
Sbjct: 186 ESPDRIKKESILIWNVLINGY---CRAKD------MHMATTLFRSMP------------- 223
Query: 354 NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
S L+K + G +N A + + M E N + LI + + A +
Sbjct: 224 ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV----VSWTTLINGFSQTGDYETAIS 279
Query: 414 MYMEMVRYGFVSHMFSVLALLTALRDHG 441
Y EM+ G + +++ A+L+A G
Sbjct: 280 TYFEMLEKGLKPNEYTIAAVLSACSKSG 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 143/371 (38%), Gaps = 63/371 (16%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT-----GF 85
RNSE +++ N +I+ R E V M G+ PD L++ +V+ GF
Sbjct: 84 RNSE--ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITF 145
R G+A + + D+F SL+ +L A+ +F+E PD I
Sbjct: 142 ---RWLGRA--LHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE---SPDRIKK 193
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+++ L + +A MH +P+ +G +++ +I G G + A
Sbjct: 194 ESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG------SWSTLIKGYVDSGELNRAK 247
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+ MPE + VS+ +I+GF Q + A EM L +G
Sbjct: 248 QLFELMPE----KNVVSWTTLINGFSQTGDYETAISTYFEM---------------LEKG 288
Query: 266 LS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
L +E T A++++A G L + + + G D I + L++
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVD------------ 336
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
MY T+ N ++ + S +++ +++ G ++A + M+
Sbjct: 337 ----------MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 385 EGNYKPDGAVY 395
KPD V+
Sbjct: 387 YSGEKPDEVVF 397
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 38/306 (12%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK--GL---SPDALSYRYV 81
F+ +NS + D + YN +I H + K + +RG +K G+ P+ ++Y +
Sbjct: 156 FSEMKNS-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--- 138
+ F + + ++D + PD +T++ ++ A + E + M S
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
PD ITF L+ + + EF K ++ + P L T+N++I
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR--------SKEKPTLPTFNSMIINYGKA 326
Query: 199 GRVEEALGILRGMPEMGLSPDAVSY--IIVISGFCQN-RELRKAYELKVEMDRKV-VWGL 254
+++A + + M +M P ++Y +I++ G+C + R+ +E E DR + L
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 255 DEVTYAYLMQGL-----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+ + Y GL D TY L AY +V L +M
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 298 KGSLPD 303
G +P+
Sbjct: 447 DGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 38/306 (12%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK--GL---SPDALSYRYV 81
F+ +NS + D + YN +I H + K + +RG +K G+ P+ ++Y +
Sbjct: 156 FSEMKNS-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--- 138
+ F + + ++D + PD +T++ ++ A + E + M S
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
PD ITF L+ + + EF K ++ + P L T+N++I
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR--------SKEKPTLPTFNSMIINYGKA 326
Query: 199 GRVEEALGILRGMPEMGLSPDAVSY--IIVISGFCQN-RELRKAYELKVEMDRKV-VWGL 254
+++A + + M +M P ++Y +I++ G+C + R+ +E E DR + L
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 255 DEVTYAYLMQGL-----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+ + Y GL D TY L AY +V L +M
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 298 KGSLPD 303
G +P+
Sbjct: 447 DGIVPN 452
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 135/340 (39%), Gaps = 60/340 (17%)
Query: 62 ILRGMAEKGLSPDALSY-----RYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
+L +++ G +P+ +SY Y G CNN A M G P A TY +
Sbjct: 161 VLSVLSKMGSTPNVISYTALMESYGRGGKCNN-----AEAIFRRMQSSGPEPSAITYQII 215
Query: 117 IQALCSKRRLSEAYHLFQEML----SP--PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
++ + EA +F+ +L SP PD + +++ G + KA + M+
Sbjct: 216 LKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 275
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
KGV V TYN++ + F +E I M + PD VSY ++I +
Sbjct: 276 KGVPQSTV--------TYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVL 289
+ R +A + EM L G+ Y L++A+ G + +
Sbjct: 325 GRARREEEALSVFEEM---------------LDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 290 TLDDEMSHKGSLPD----SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
T+ M PD + + S +N D + K K I D PN + Y
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR----IKVDGF---EPNIVTY 422
Query: 346 DTLIENCSN-NEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
TLI+ + N+ + ++ + + + G+ +A+ T+L
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGI-----KANQTIL 457
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 96/272 (35%), Gaps = 68/272 (25%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D Y+ +I + EK + M KG+ ++Y +++ + + K Y
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY 302
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ +M + I PD +Y+ LI+A RR EA +F+EML P + L+ A
Sbjct: 303 D---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDF---------------------------VTGFSPAL 185
+ G +A + M + PD V GF P +
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 186 FTYNAIIHGLCFLGRVEE-----------------------------------ALGILRG 210
TY +I G VE+ ALG +
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 479
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
M G+ PD + +++S EL +A EL
Sbjct: 480 MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 29/226 (12%)
Query: 13 KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
K F MV GV Q TYN ++ + V K I M +
Sbjct: 268 KVFSSMVGKGV-------------PQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQ 311
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PD +SY +I + R +A EM G+ P Y+ L+ A + +A +
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
F+ M PD ++TT++ A + A ++ V GF P + TY
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK--------VDGFEPNIVTYG 423
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDA--VSYIIVISGFCQN 233
+I G VE+ + + M G+ + ++ I+ SG C+N
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN 469
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 131/338 (38%), Gaps = 52/338 (15%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHM 164
P S+I A L +AY LF E P +T + L++A G+ +A H+
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+ K + D V YN +I + G+++ A I M G+ +Y
Sbjct: 762 SRTCLEKNIELDTVG--------YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGE 284
+IS + + +L KA E+ R GL YL DE Y ++I Y G+
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRS---GL------YL-----DEKIYTNMIMHYGKGGK 859
Query: 285 LFKVLTLDDEMSHKGSLPDSV-----------------IDSLLINGLDKKARTKDTKAHL 327
+ + L+L EM KG P + +D LL +++ R D +L
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELL-QAMERNGRCTDLSTYL 918
Query: 328 LLI-----IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
LI + + ++ + I ++ + LVK+ G++ EA R +
Sbjct: 919 TLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKA----GMMEEAERTYCK 974
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
M E PD A ++ + + K Y +M+R
Sbjct: 975 MSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIR 1012
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 45/257 (17%)
Query: 78 YRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
Y ++++ GK + LEM ++G+ P+ FTY+ ++ + + EA F EM
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 138 S---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------GFS 182
S P+++T+++++ G++ KA ++ M +G++P T +
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 183 PALFTY----------NAIIHGLCF-----LGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
AL + + +I GL LG +A + + L D +Y+ +
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
+ + KA ++ +EM + L Y ++Q YA + N CA+ E F+
Sbjct: 441 QVHLNSGNVVKALDV-IEMMKTRDIPLSRFAYIVMLQ------CYAKIQNVDCAE-EAFR 492
Query: 288 VLTLDDEMSHKGSLPDS 304
L+ K LPD+
Sbjct: 493 ALS-------KTGLPDA 502
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 49 QHC-LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGIL 107
+HC +Q ++G I + ++G+S + VI+ + + R A++ EM ++ I+
Sbjct: 13 RHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIV 72
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEML----SPPDDITFTTLMHACCLEGEFSKAFH 163
T+++++ S + ++A L++ ML ++ ++ ++ AC L G+
Sbjct: 73 ----TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 164 MHHQM-------------------IHKGVLPDFVTGFS----PALFTYNAIIHGLCFLGR 200
++ ++ + G L + + F P+ ++N +I G C G
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
++EA+ + MP+ P+ VS+ +ISGF R A E V M R+
Sbjct: 189 MDEAVTLFHRMPQ----PNVVSWNCLISGFVDKGSPR-ALEFLVRMQRE 232
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 135/340 (39%), Gaps = 60/340 (17%)
Query: 62 ILRGMAEKGLSPDALSY-----RYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
+L +++ G +P+ +SY Y G CNN A M G P A TY +
Sbjct: 168 VLSVLSKMGSTPNVISYTALMESYGRGGKCNN-----AEAIFRRMQSSGPEPSAITYQII 222
Query: 117 IQALCSKRRLSEAYHLFQEML----SP--PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
++ + EA +F+ +L SP PD + +++ G + KA + M+
Sbjct: 223 LKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 282
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
KGV V TYN++ + F +E I M + PD VSY ++I +
Sbjct: 283 KGVPQSTV--------TYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVL 289
+ R +A + EM L G+ Y L++A+ G + +
Sbjct: 332 GRARREEEALSVFEEM---------------LDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 290 TLDDEMSHKGSLPD----SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
T+ M PD + + S +N D + K K I D PN + Y
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR----IKVDGFE---PNIVTY 429
Query: 346 DTLIENCSN-NEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
TLI+ + N+ + ++ + + + G+ +A+ T+L
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGI-----KANQTIL 464
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 96/272 (35%), Gaps = 68/272 (25%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D Y+ +I + EK + M KG+ ++Y +++ + + K Y
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY 309
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ +M + I PD +Y+ LI+A RR EA +F+EML P + L+ A
Sbjct: 310 D---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDF---------------------------VTGFSPAL 185
+ G +A + M + PD V GF P +
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 186 FTYNAIIHGLCFLGRVEE-----------------------------------ALGILRG 210
TY +I G VE+ ALG +
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
M G+ PD + +++S EL +A EL
Sbjct: 487 MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 29/226 (12%)
Query: 13 KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
K F MV GV Q TYN ++ + V K I M +
Sbjct: 275 KVFSSMVGKGV-------------PQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQ 318
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PD +SY +I + R +A EM G+ P Y+ L+ A + +A +
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
F+ M PD ++TT++ A + A ++ V GF P + TY
Sbjct: 379 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK--------VDGFEPNIVTYG 430
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDA--VSYIIVISGFCQN 233
+I G VE+ + + M G+ + ++ I+ SG C+N
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN 476
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 110/540 (20%), Positives = 222/540 (41%), Gaps = 83/540 (15%)
Query: 1 MKLLRDSFTATLKTFRH------MVRNGVVCRFTA------ARN--SESIQQDLATYNKI 46
MK L+D F +++ + + N +V ++ ARN E +++++ ++N +
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 47 IKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC-NNRCPGKAYEFKLEMDQK- 104
I + V++ + D ++Y +++GF + C +A E EM +K
Sbjct: 61 IAAYVKFNNVKEARELFES---DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 105 --GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLMHACCLEGEFS 159
I D FT +++++ + L ++ +D T ++L+H G+F
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFK 177
Query: 160 KAFHM-------------HHQMI----HKGVLPDFVTGF--SPAL---FTYNAIIHGLCF 197
+ ++ + MI +G + ++ F +P L ++N +I G
Sbjct: 178 EVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-------DRKV 250
G EEAL + M E GL D S+ V++ + L+ E+ + ++ V
Sbjct: 238 NGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFV 297
Query: 251 VWGLDEV----------TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
G+ +V A+L+ G + + +S+I Y +QG++ + L D +S K
Sbjct: 298 SSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNL 357
Query: 301 L--------------PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIY 345
+ PDSV++ L + + T D+ + ++ A + M P I+
Sbjct: 358 VVWTAMFLGYLNLRQPDSVLE-LARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIH 416
Query: 346 DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
+ + K V V +S G V A R D+ +++ D +YN +I
Sbjct: 417 GHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS----SFERDTVMYNAMIAGCAHH 472
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELH 465
+ K++ + +M GF + +ALL+A R G+ E ++ + + N++ H
Sbjct: 473 GHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGH 532
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 177/444 (39%), Gaps = 82/444 (18%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
++ +DL K+I L ++ V + + E P+ +I N P +A
Sbjct: 46 NLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQA 101
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS--EAYHLFQEMLSPPDDITFTTLMHAC 152
+ EM + G+ D FTY L++A + L + H E L DI + C
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 153 ---CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C A + +M + + ++N+++ GL G + +A +
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTV------------SWNSMLGGLVKAGELRDARRLFD 209
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSD 268
MP+ D +S+ ++ G+ + RE+ KA+EL +M +R V
Sbjct: 210 EMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTV----------------- 248
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP--DSVIDSLLINGLDKKARTKDTKAH 326
++++++ Y G++ + D+M LP + V +++I G +K K+
Sbjct: 249 --SWSTMVMGYSKAGDMEMARVMFDKMP----LPAKNVVTWTIIIAGYAEKGLLKE---- 298
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
AD + D ++ + + +V+ ++ + + GL++ R H +
Sbjct: 299 -----ADRLV---------DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS------------HMFSVLALL 434
N + V N L+ + + N+ KA++++ ++ + VS H + L
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 435 TALRDHGMYNERSWVIQNTLRSCN 458
+ +R G+ ++ I L SCN
Sbjct: 405 SRMRREGIRPDKVTFIA-VLCSCN 427
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
ES+ DL +Y +I +VE+ ++ M +K L ++ Y ++ G+ K
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMH 150
E EM +G+ P+ TY L+ LC ++ EA E+ D+ ++TL
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSE 394
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLP 175
C G K+ + +MI G +P
Sbjct: 395 ECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
+ ++ L K R+ EA+ + + M S P D ++ + + C +G+ ++A + +M
Sbjct: 163 FHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKME 222
Query: 170 HK--GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+ GV+ SP TY+A++ G C GRVE A+ ILR M E GLS
Sbjct: 223 EEEEGVM-------SPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLS 265
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 173/426 (40%), Gaps = 58/426 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+D+ ++N +IK + +E+ + M+EK + +++ ++ G+C +AY
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYR 252
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-----PPDDITFTTLMHA 151
EM ++ I+ +++++I EA LF EM P+ T +L +A
Sbjct: 253 LFCEMPERNIV----SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G F + +H V+ + +++H G + A +L
Sbjct: 309 C---GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE- 364
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKA---YELKVEMDRKVVWG--------LDEVTYA 260
S D S I+I+ + +N +L +A +E + KV W +V+ A
Sbjct: 365 -----SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRA 419
Query: 261 Y-LMQGLSDED--TYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+ L Q L D+D T+ +I+ Q ELF + +L +M G P + S+L++
Sbjct: 420 FGLFQKLHDKDGVTWTVMISGL-VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
+ D H+ +IA P+ I+ ++L V ++ G + +A
Sbjct: 479 TSNL-DQGKHIHCVIAKTTACYDPDLILQNSL---------------VSMYAKCGAIEDA 522
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
M++ D +N +I KA N++ EM+ G + + L +L+A
Sbjct: 523 YEIFAKMVQ----KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 437 LRDHGM 442
G+
Sbjct: 579 CSHSGL 584
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 32/188 (17%)
Query: 106 ILPD--AFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFH 163
++P+ T ++++ RR++EA+ LF+EM P + +++T ++ A C +G A
Sbjct: 102 VMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM--PKNVVSWTVMLTALCDDGRSEDAVE 159
Query: 164 MHHQMIHKGVLP--DFVTGF-----------------SPALFTYNAIIHGLCFLGRVEEA 204
+ +M + V+ VTG S + ++NA+I G +EEA
Sbjct: 160 LFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEA 219
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+ M E + V++ ++ G+C+ ++R+AY L EM + + V++ ++
Sbjct: 220 KLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI-----VSWTAMIS 270
Query: 265 GLSDEDTY 272
G + + Y
Sbjct: 271 GFAWNELY 278
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 29/189 (15%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP 140
++TG+ R +A+ EM + + +++ ++ ALC R +A LF EM
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEM-PER 167
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP--DFVTGF--------SPALF---- 186
+ +++ TL+ G+ KA + M + V+ + G+ + LF
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 187 -----TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
T+ ++++G C G V EA + MPE + VS+ +ISGF N R+A
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALM 283
Query: 242 LKVEMDRKV 250
L +EM + V
Sbjct: 284 LFLEMKKDV 292
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
D ++ +I + V + G+ + + +K D +++ +I+G N +A
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASL 453
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTL--MH 150
+M + G+ P TYS L+ + + L + H+ + PD I +L M+
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C G A+ + +M+ K + ++N++I GL G ++AL + +
Sbjct: 514 AKC--GAIEDAYEIFAKMVQKDTV------------SWNSMIMGLSHHGLADKALNLFKE 559
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
M + G P++V+++ V+S + + + EL
Sbjct: 560 MLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 159/389 (40%), Gaps = 61/389 (15%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
++E V +L E+ D + V++GF N +A LEM G+ P+ FTY
Sbjct: 273 SKMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIH--- 170
S+++ +LCS R + F +H+ ++ F + + + ++
Sbjct: 329 SAIL-SLCSAVR----------------SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 171 ----KGVLPDFVTG--FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
V V G SP + ++ +I GL G V++ G+L M + + P+ V+
Sbjct: 372 KCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 225 IVISGFCQNRELRK-----AYELKVEMDRKVVWGLD---------EVTYAY-LMQGLSDE 269
V+ + R +R+ AY L+ +D ++V G +V YA+ +++ +
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Query: 270 D--TYASLINAYCAQGELFKVLTLDDEMSHKG------SLPDSVIDSLLINGLDK----- 316
D TY SL+ + G+ L++ + M G SLP + S + L+
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH 551
Query: 317 --KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
++ + A +L MY+ + + E + + S GLV + G ++
Sbjct: 552 CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFIS 611
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
A A + M +PD + L++ C
Sbjct: 612 SALSAFEEMRMKETEPDSVTF-LILLSAC 639
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 26/262 (9%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY ++ +C EK G+L M E ++P ++SY ++T + K E+
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQEL 184
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTLMHACCLEGE 157
+ ++PD++TY+ ++AL + +S + +EM PD T++ + G
Sbjct: 185 KAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGL 244
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
KA ++ K DF Y +I LG++ E I R +
Sbjct: 245 SQKAEKALQELEMKNTQRDFT--------AYQFLITLYGRLGKLTEVYRIWRSLRLAIPK 296
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
V+Y+ +I + +L A L E W + TY D LI
Sbjct: 297 TSNVAYLNMIQVLVKLNDLPGAETLFKE------WQANCSTY--------DIRIVNVLIG 342
Query: 278 AYCAQGELFKVLTLDDEMSHKG 299
AY +G + K L ++ +G
Sbjct: 343 AYAQEGLIQKANELKEKAPRRG 364
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN---RC 90
E + D++ N +++ + EK V + M ++G+SPD ++ +V+ C+ R
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA-CSKLEWRS 129
Query: 91 PGKAYE--------------------FKLEMDQKGILPDAF---------TYSSLIQALC 121
G A+ F GI + F +SS+
Sbjct: 130 NGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 122 SKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
+ ++ EA LF EM D + + ++ C E A + + K V+
Sbjct: 190 KRGKIDEAMRLFDEM-PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV------- 241
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
T+NA+I G G +EALGI + M + G PD V+ + ++S
Sbjct: 242 -----TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 116/283 (40%), Gaps = 26/283 (9%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
+DL +N + + E+ + + + PD ++ ++T N EF
Sbjct: 518 KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE 157
++ ++G+ + + ++L+ +A+ F S D + + +++ + GE
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGE 636
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
KA M +M+ +G+ P+++ T+ ++ G VE+ L M G+
Sbjct: 637 GKKALQMLEKMMSEGIEPNYI--------TFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRK---VVW-----------GLDEVTYAYLM 263
P+ Y+ ++S + L KA EL +M K +VW ++ +A M
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 264 QGLS---DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
LS D ++ L N Y ++G + + + M +G + +
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 149/349 (42%), Gaps = 56/349 (16%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQR-VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
S + D ATY+++IK C+ R V +G I R + G P +I +
Sbjct: 53 QSHGLWADSATYSELIKC-CISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTT 147
A++ +M Q+ ++ +++++I A + +A L ML P+ T+++
Sbjct: 112 LNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
++ +C + +M+H G++ + G +F +A+I LG E+AL +
Sbjct: 168 VLRSCNGMSDV--------RMLHCGIIKE---GLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
M ++ DA+ + +I GF QN A EL M R ++ T +++ +
Sbjct: 217 FDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA-EQATLTSVLRACT 271
Query: 268 ------------------DEDTY--ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
D+D +L++ YC G L L + ++M + D +
Sbjct: 272 GLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITW 327
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSN 354
S +I+GL + +++ L + + M +S PNYI ++ CS+
Sbjct: 328 STMISGLAQNGYSQEA-----LKLFERMKSSGTKPNYITIVGVLFACSH 371
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 23/230 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG--FCNNRCP 91
E ++ ++N +I H E +G M E GL PD++S V+T C
Sbjct: 512 EMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHA 151
G Y F+ GI P Y+ ++ L R +EA L EM PD+I ++++++A
Sbjct: 572 GTEY-FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C + S A ++ L D Y ++ + G E+ + + M
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAA--------AYVSMSNIYAAAGEWEKVRDVKKAM 682
Query: 212 PEMGLSP-DAVSYIIV---ISGFCQNRE--------LRKAYELKVEMDRK 249
E G+ A S++ V I F N + +RK EL E++R+
Sbjct: 683 RERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D +++ +I GF +A EM Q+ + +++S+I R +A +F
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMF 246
Query: 134 QEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK------------------- 171
+EM PD T +L++AC G + +H ++
Sbjct: 247 REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 172 GVLPDFVTGFSPA----LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
G + + + F A L +N++I GL G E A+ + + GL PD+VS+I V+
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 228 SGFCQNRELRKAYELKVEMDRK 249
+ + E+ +A E M K
Sbjct: 367 TACAHSGEVHRADEFFRLMKEK 388
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F +L+ FR M G++ D T ++ + +E G I +
Sbjct: 349 FNESLEIFREMQSAGMI-------------PDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ + D + +I + C KA + +MDQ+ D FT+++++ L + +
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQ 451
Query: 128 EAYHLF---QEMLSPPDDITFTTLMHACCLEGEFSKA--FHMHHQMIHKGVLPDFVTGFS 182
EA +F Q+M PDDIT+ ++ AC G +A F + H+
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR---------IE 502
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
P+L Y ++ L G V+EA ILR MP ++P+++ +
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIVW 540