Miyakogusa Predicted Gene
- Lj0g3v0124009.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0124009.1 Non Characterized Hit- tr|D8RLC5|D8RLC5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,26.36,2e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAMI,CUFF.7449.1
(509 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 405 e-113
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 177 3e-44
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 154 3e-37
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 153 4e-37
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 152 5e-37
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 152 7e-37
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 151 2e-36
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 151 2e-36
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 150 2e-36
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 148 1e-35
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 148 1e-35
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 147 3e-35
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 146 4e-35
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 146 4e-35
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 146 4e-35
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 146 4e-35
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 145 9e-35
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 144 1e-34
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 144 2e-34
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 143 3e-34
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 143 4e-34
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 142 9e-34
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 141 1e-33
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 141 1e-33
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 140 2e-33
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 140 2e-33
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 140 3e-33
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 140 3e-33
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 140 3e-33
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 140 4e-33
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 139 4e-33
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 5e-33
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 139 6e-33
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 139 7e-33
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 8e-33
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 8e-33
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 138 1e-32
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 2e-32
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 137 3e-32
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 137 3e-32
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 137 3e-32
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 136 5e-32
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 5e-32
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 6e-32
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 7e-32
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 135 1e-31
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 135 1e-31
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 134 3e-31
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 133 3e-31
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 133 5e-31
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 133 5e-31
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 133 5e-31
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 133 5e-31
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 132 6e-31
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 132 1e-30
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 130 2e-30
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 130 3e-30
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 130 3e-30
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 130 3e-30
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 130 4e-30
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 130 4e-30
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 129 5e-30
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 129 5e-30
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 129 6e-30
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 129 9e-30
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 128 1e-29
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 127 2e-29
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 127 2e-29
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 127 3e-29
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 127 3e-29
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 126 4e-29
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 126 5e-29
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 126 6e-29
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 125 7e-29
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 9e-29
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 125 9e-29
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 1e-28
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 125 1e-28
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 124 2e-28
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 124 3e-28
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 124 3e-28
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 124 3e-28
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 4e-28
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 123 5e-28
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 122 6e-28
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 122 6e-28
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 122 6e-28
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 122 6e-28
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 6e-28
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 122 7e-28
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 122 7e-28
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 9e-28
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 1e-27
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 1e-27
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 121 1e-27
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 121 2e-27
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 121 2e-27
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 121 2e-27
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 120 3e-27
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 9e-27
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 118 1e-26
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 118 1e-26
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 118 2e-26
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 118 2e-26
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 117 2e-26
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 117 3e-26
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 3e-26
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 117 3e-26
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 116 4e-26
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 8e-26
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 115 8e-26
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 115 1e-25
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 2e-25
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 114 2e-25
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 3e-25
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 3e-25
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 114 3e-25
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 113 4e-25
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 113 4e-25
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 112 7e-25
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 112 8e-25
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 112 1e-24
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 112 1e-24
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 111 1e-24
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 111 2e-24
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 111 2e-24
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 111 2e-24
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 3e-24
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 110 5e-24
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 110 5e-24
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 5e-24
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 6e-24
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 7e-24
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 109 7e-24
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 7e-24
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 109 8e-24
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 108 9e-24
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 108 1e-23
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 108 1e-23
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 2e-23
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 3e-23
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 107 3e-23
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 4e-23
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 5e-23
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 105 8e-23
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 105 1e-22
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 105 1e-22
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 105 1e-22
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 104 2e-22
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 104 2e-22
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 104 2e-22
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 3e-22
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 103 3e-22
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 103 5e-22
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 103 5e-22
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 103 6e-22
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 102 7e-22
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 101 1e-21
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 2e-21
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 100 3e-21
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 100 3e-21
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 5e-21
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 5e-21
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 99 7e-21
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 99 7e-21
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 99 7e-21
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 99 7e-21
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 99 7e-21
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 99 1e-20
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 98 2e-20
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 98 2e-20
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 2e-20
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 97 3e-20
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 97 3e-20
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 4e-20
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 96 6e-20
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 96 9e-20
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 95 2e-19
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 95 2e-19
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 3e-19
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 94 3e-19
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 6e-19
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 93 6e-19
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 93 6e-19
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 92 1e-18
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 92 1e-18
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 92 1e-18
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 92 1e-18
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 92 1e-18
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 92 2e-18
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 92 2e-18
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 91 3e-18
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 90 5e-18
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 89 1e-17
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 88 2e-17
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 87 3e-17
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 87 5e-17
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 87 5e-17
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 1e-16
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 85 2e-16
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 85 2e-16
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 2e-16
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 84 2e-16
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 84 3e-16
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 84 3e-16
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 84 3e-16
Medtr8g058400.1 | PPR containing plant-like protein | HC | chr8:... 84 4e-16
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 84 4e-16
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 84 4e-16
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 84 5e-16
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 84 5e-16
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 83 6e-16
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 7e-16
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 9e-16
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 82 1e-15
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 82 1e-15
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 82 1e-15
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 82 2e-15
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 82 2e-15
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-15
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 80 5e-15
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 80 5e-15
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 79 7e-15
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 79 7e-15
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 79 1e-14
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 79 1e-14
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 79 1e-14
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 79 1e-14
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 79 1e-14
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 1e-14
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 1e-14
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 78 2e-14
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 78 2e-14
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 77 4e-14
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 76 7e-14
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 75 1e-13
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 75 1e-13
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 75 1e-13
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 75 1e-13
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 75 1e-13
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-13
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 74 3e-13
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 74 3e-13
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 74 3e-13
Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 4e-13
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 74 4e-13
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 73 5e-13
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 6e-13
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 73 6e-13
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 73 6e-13
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 73 7e-13
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 73 7e-13
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 8e-13
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 72 1e-12
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 2e-12
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 70 4e-12
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 70 5e-12
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 5e-12
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 70 5e-12
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 69 7e-12
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 69 8e-12
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 9e-12
Medtr5g088510.1 | PPR containing plant-like protein | LC | chr5:... 69 1e-11
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 69 1e-11
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 1e-11
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 69 1e-11
Medtr7g005780.1 | PPR containing plant protein | HC | chr7:35224... 69 2e-11
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 68 2e-11
Medtr2g104640.1 | PPR containing plant-like protein | HC | chr2:... 68 2e-11
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr5g088490.2 | PPR containing plant-like protein | LC | chr5:... 68 2e-11
Medtr5g088490.1 | PPR containing plant-like protein | LC | chr5:... 68 2e-11
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr1g037260.1 | PPR containing plant protein | HC | chr1:13702... 68 2e-11
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 68 3e-11
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 67 3e-11
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 67 4e-11
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 67 4e-11
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 67 4e-11
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 67 5e-11
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-11
Medtr8g107230.1 | PPR containing plant-like protein | HC | chr8:... 65 2e-10
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 64 3e-10
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 64 4e-10
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 64 4e-10
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 64 4e-10
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 64 4e-10
Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 5e-10
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 63 6e-10
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 63 6e-10
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 63 7e-10
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 8e-10
Medtr1g064380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 8e-10
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 63 8e-10
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 62 1e-09
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-09
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-09
Medtr2g018820.1 | PPR containing plant-like protein | HC | chr2:... 62 1e-09
Medtr2g018820.2 | PPR containing plant-like protein | HC | chr2:... 62 1e-09
Medtr7g100550.1 | PPR containing plant-like protein | HC | chr7:... 61 2e-09
Medtr1g036840.1 | PPR containing plant protein | LC | chr1:13563... 61 2e-09
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 3e-09
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 61 3e-09
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 4e-09
Medtr3g052970.1 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 60 5e-09
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 60 5e-09
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 60 5e-09
Medtr1g105580.1 | PPR domain protein | LC | chr1:47566832-475695... 60 5e-09
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 60 5e-09
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 6e-09
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 60 6e-09
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 60 6e-09
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 60 6e-09
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 60 7e-09
Medtr8g091670.1 | PPR containing plant-like protein | HC | chr8:... 60 8e-09
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 59 8e-09
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 59 9e-09
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 59 9e-09
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 59 1e-08
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 59 1e-08
Medtr5g048070.1 | PPR containing plant-like protein | HC | chr5:... 59 1e-08
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 59 1e-08
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 59 1e-08
Medtr6g071320.1 | PPR containing plant-like protein | HC | chr6:... 59 1e-08
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 59 1e-08
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 59 2e-08
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-08
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 58 2e-08
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 58 3e-08
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 58 3e-08
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 57 3e-08
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-08
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 57 4e-08
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 57 5e-08
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 57 5e-08
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 5e-08
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 57 5e-08
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 57 6e-08
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 57 6e-08
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 6e-08
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 56 7e-08
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 56 7e-08
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 8e-08
Medtr3g081310.1 | PPR containing plant protein | HC | chr3:36828... 56 8e-08
Medtr5g019860.1 | PPR containing plant-like protein | HC | chr5:... 56 8e-08
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 56 9e-08
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 56 9e-08
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 56 9e-08
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 55 1e-07
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 55 1e-07
Medtr0086s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 1e-07
Medtr1g054655.1 | PPR superfamily protein | LC | chr1:23786289-2... 55 1e-07
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 55 1e-07
Medtr1g039290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 1e-07
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 55 1e-07
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-07
Medtr1g034420.1 | PPR superfamily protein | LC | chr1:12536372-1... 55 1e-07
Medtr7g028623.1 | PPR containing plant-like protein | HC | chr7:... 55 2e-07
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-07
Medtr1g009650.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-07
Medtr1g034440.1 | PPR superfamily protein | LC | chr1:12539755-1... 55 2e-07
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 55 2e-07
Medtr4g108900.1 | PPR containing plant-like protein | HC | chr4:... 54 3e-07
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-07
Medtr4g081220.1 | PPR containing plant-like protein | HC | chr4:... 54 3e-07
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 54 4e-07
Medtr4g123860.1 | PPR containing plant-like protein | HC | chr4:... 54 4e-07
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 54 4e-07
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 54 4e-07
Medtr6g079340.1 | PPR containing plant-like protein | LC | chr6:... 54 5e-07
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 54 5e-07
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 5e-07
Medtr3g030450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 6e-07
Medtr1g113020.1 | PPR containing plant-like protein | LC | chr1:... 53 6e-07
Medtr3g052720.1 | organelle transcript processing protein, putat... 53 8e-07
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 53 8e-07
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 53 8e-07
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 53 8e-07
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 53 9e-07
Medtr5g006420.1 | organelle transcript processing protein, putat... 53 9e-07
Medtr3g104020.1 | PPR superfamily protein | LC | chr3:47925706-4... 52 1e-06
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 52 1e-06
Medtr8g098445.1 | PPR containing plant-like protein | HC | chr8:... 52 1e-06
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 52 1e-06
Medtr5g044120.1 | PPR containing plant-like protein | HC | chr5:... 52 2e-06
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-06
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 52 2e-06
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 51 2e-06
Medtr6g069480.3 | PPR containing plant-like protein | HC | chr6:... 51 2e-06
Medtr6g069480.2 | PPR containing plant-like protein | HC | chr6:... 51 3e-06
Medtr6g069480.4 | PPR containing plant-like protein | HC | chr6:... 51 3e-06
Medtr6g069480.5 | PPR containing plant-like protein | HC | chr6:... 51 3e-06
Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-282396... 51 3e-06
Medtr2g090885.3 | PPR containing plant-like protein | HC | chr2:... 50 4e-06
Medtr2g090885.2 | PPR containing plant-like protein | HC | chr2:... 50 4e-06
Medtr2g090885.4 | PPR containing plant-like protein | HC | chr2:... 50 4e-06
Medtr2g090885.1 | PPR containing plant-like protein | HC | chr2:... 50 4e-06
Medtr6g079320.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 4e-06
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 50 4e-06
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 4e-06
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 50 6e-06
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 6e-06
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 50 7e-06
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 9e-06
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/498 (45%), Positives = 310/498 (62%), Gaps = 39/498 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ +L +YN +I C R+ + + ++ M+ KGLSPD ++Y ++ GFC + +A
Sbjct: 260 VEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQAL 319
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
EM KG+ P+ TY++LI +C + LS A + M P++ T+TTL+
Sbjct: 320 VLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGF 379
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C +G ++A+ + +M+ +GF P++ TYNA+++G C LGRVEEA+G+L+ M
Sbjct: 380 CRQGLMNEAYKVLSEMVD--------SGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMV 431
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------ 266
E GL PD VSY VIS FC+N EL KA+++K+EM K + D VTY+ L+QGL
Sbjct: 432 ERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILP-DAVTYSSLIQGLCCQRKL 490
Query: 267 ----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
DE TY +L+N YC +GEL K L L DEM KG LPD V S+L
Sbjct: 491 SEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVL 550
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMR 370
INGL+KKART++ K LL + D S+PN + Y+TLIENCS NEFKSVVGLVK F M+
Sbjct: 551 INGLNKKARTREAKKLLLKLFYD---ESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMK 607
Query: 371 GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
GL++EA R +TM + N+KPDG VYNL+I HCR NV KAYNMY EMV GFVSHM +V
Sbjct: 608 GLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNMYTEMVHCGFVSHMVTV 667
Query: 431 LALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVLAEI 490
+AL+ AL GM +E S V+QN L SC LND+EL K L I+ ++ +L++L E+
Sbjct: 668 IALIKALSKEGMNDELSSVMQNILNSCTLNDAELSKALVRINFKEGHM--DVVLNLLTEM 725
Query: 491 AMDGLLLDGRKCSYASAS 508
A +GLL DG S ASAS
Sbjct: 726 ANNGLLPDGGDYSCASAS 743
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 200/420 (47%), Gaps = 50/420 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D YN II C V + +LRGM + G+ PD + Y VI+GFC
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A + EM +K I+PD TY+S+I +C ++ EA +F EML PD++T+T L+
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C GE +AF +H+QM+ KG+ P+ V TY A+ GLC G ++ A +L
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVV--------TYTALADGLCKNGEIDVANELLHE 477
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M GL P+ +Y +++G C+ + + +L EMD + D +TY LM
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP-DTITYTTLM------- 529
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
+AYC GE+ K L M +K P V ++L+NG +D + + +
Sbjct: 530 ------DAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583
Query: 331 IADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
+ + MPN +++L++ C N ++ + K+ RG++
Sbjct: 584 LEKGI---MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM---------------- 624
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWV 449
PD YN+LI HC+ N+ +A+ ++ EMV G +SV A G Y + +V
Sbjct: 625 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG-----YSVTAATYDALIRGFYKRKKFV 679
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 57/349 (16%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
E + G+ + + + ++ LC ++ EA++L +M PD +++ ++ C G
Sbjct: 232 EFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIG 291
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
E K + ++ KG+ PD + YN II LC G V EA +LRGM + G+
Sbjct: 292 ELDKVLKLVDELKGKGLKPD--------EYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---------- 266
PD V Y VISGFC+ + A +L EM RK + D VTY ++ G+
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVP-DIVTYTSVIHGICKSGKMVEAR 402
Query: 267 ------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
DE TY +LI+ YC GE+ + ++ ++M KG P+ V + L +GL
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL- 372
K D LL ++ PN Y+T++ C + V L++ + G
Sbjct: 463 CKNGEI-DVANELLHEMSRKGL--QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519
Query: 373 ---------------VNEAARAHD---TMLEGNYKPDGAVYNLLIFDHC 403
+ E A+AH+ ML +P +N+L+ C
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFC 568
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ +Q ++ TYN I+ C + +E+ V ++ M G PD ++Y ++ +C K
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK 540
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A+E M K + P T++ L+ C L + L + ML P+ TF +LM
Sbjct: 541 AHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMK 600
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C++ ++ M +GV+PD TYN +I G C ++EA + +
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSN--------TYNILIKGHCKARNMKEAWFLHKE 652
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M E G S A +Y +I GF + ++ +A +L EM + GL ++++D
Sbjct: 653 MVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKH---GL-----------VAEKD 698
Query: 271 TYASLINAYCAQGELFKVLTLDDE 294
Y ++ +G L L DE
Sbjct: 699 IYDIFVDVNYEEGNWEITLELCDE 722
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 64/367 (17%)
Query: 109 DAFTYSSLIQALCSKRRL--SEAYHLFQEML--------SPPDDITFTTLMHACCLEGEF 158
D T L+ C+K ++ S+++HLF EML S P + F G
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFV 187
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A + H+++ GV+ V+ S LF + C ++ A+ + PE+G+
Sbjct: 188 LEAQKLFHKLLRYGVV---VSVDSCNLF----LSRLSCNFEGIKIAVKVFEEFPELGVCW 240
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
+ VS IV+ CQ ++R+A+ L V+M + D +Y +++
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDR--------------GNFPDVVSYGVVVSG 286
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
YC GEL KVL L DE+ KG PD I + +I L K + + L+ +
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQ---LLRGMRKWGV 343
Query: 339 MPNYIIYDTLIE------NCSNN-----------------EFKSVV-GLVKSFSMRGLVN 374
P+ ++Y T+I N S + SV+ G+ KS G +
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKS----GKMV 399
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
EA + ML +PD Y LI +C+ + +A++++ +MV+ G ++ + AL
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459
Query: 435 TALRDHG 441
L +G
Sbjct: 460 DGLCKNG 466
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC---NNR 89
++ +Q L T+N ++ C+ +E G ++ M EKG+ P+A ++ ++ +C N R
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT-- 147
+ Y+ M +G++PD+ TY+ LI+ C R + EA+ L +EM+ +T T
Sbjct: 610 ATTEIYK---AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666
Query: 148 -LMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
L+ +F +A + +M G++ +
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 190/428 (44%), Gaps = 52/428 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +L+ + + P+ + Y +I C + +A++
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
EM KGI PD TYS+LI C +L +A LF +M+ PD TF L++A C +
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ + + M+ +G+ P+FV TYN+++ G C + V +A I M + G
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFV--------TYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
++PD SY I+I+GFC+ ++ +A L EM RK + D VTY+ L+ GLS
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYA 419
Query: 271 -----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY S+++A C ++ K + L + KG PD S+LI G
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L + + +D + +++ L+ N + + +++ F + GL
Sbjct: 480 LCQSGKLEDARK------------------VFEDLLVKGYNLDVYAYTIMIQGFCVEGLF 521
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLAL 433
NEA M + PD Y ++I ++ A + EM+ G + + +
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFYDLYLT 581
Query: 434 LTALRDHG 441
A HG
Sbjct: 582 RLAQTWHG 589
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 27/288 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I+ D+ T+N ++ C ++++G + M ++G+ P+ ++Y ++ G+C + K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q G+ PD +YS +I C ++ EA +LF+EM PD +T+++L+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G S A + QM +GV P+ + TYN+I+ LC +V++A+ +L
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPN--------ICTYNSILDALCKTHQVDKAIALLTK 460
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ G PD +Y I+I G CQ+ +L A RKV L L++G + D
Sbjct: 461 FKDKGFQPDISTYSILIKGLCQSGKLEDA--------RKVFEDL-------LVKGYNLDV 505
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
Y +I +C +G + L L +M G +PD+ ++I L KK
Sbjct: 506 YAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 45/390 (11%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
V+ V + + + +P A + ++ ++ +M+ +GI P+ +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 116 LIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LI C + A+ +F ++L PD ITFTTL CL+G+ +AF H +++
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVV--- 182
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
GF +Y +IHGLC +G AL +L+ + + P+ V Y +I C+
Sbjct: 183 -----ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTL 291
+ + +A++L EM K G+S D TY++LI+ +C G+L + L
Sbjct: 238 VKLVNEAFDLFSEMVSK---------------GISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
++M + PD ++L+N K + K+ K +++ + PN++ Y++L++
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI---KPNFVTYNSLMDG 339
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
LVK VN+A +TM +G PD Y+++I C+ +A
Sbjct: 340 YC---------LVKE------VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 412 YNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
N++ EM R + + + +L+ L G
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 192/440 (43%), Gaps = 62/440 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ +L N +I C + + + + + G PD +++ + G C +A+
Sbjct: 116 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF 175
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F ++ G D +Y +LI LC A L Q + L P+ + + T++ +
Sbjct: 176 LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSM 235
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C ++AF + +M+ KG+ PD V TY+A+I G C LG++++A+ + M
Sbjct: 236 CKVKLVNEAFDLFSEMVSKGISPDVV--------TYSALISGFCILGKLKDAIDLFNKMI 287
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE--VTYAYLMQGL---- 266
+ PD ++ I+++ FC++ +++ E K D + G+ VTY LM G
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMK---EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344
Query: 267 ------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D +Y+ +IN +C + + + L EM K +PD V S
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIEN-CSNNEFKSVVGLVK 365
LI+GL K R L + D M+ PN Y+++++ C ++ + L+
Sbjct: 405 SLIDGLSKSGRIS-----YALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
F +G ++PD + Y++LI C+ + A ++ +++ G+
Sbjct: 460 KFKDKG----------------FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNL 503
Query: 426 HMFSVLALLTALRDHGMYNE 445
+++ ++ G++NE
Sbjct: 504 DVYAYTIMIQGFCVEGLFNE 523
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ TYN I+ C +V+K + +L +KG PD +Y +I G C + A
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ ++ KG D + Y+ +IQ C + +EA L +M PD T+ ++ +
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDF 177
+ E A + +MI +G+ +F
Sbjct: 551 FKKDENDMAEKLLREMIARGLPLNF 575
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ Q D++TY+ +IK C ++E + + KG + D +Y +I GFC +
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNE 523
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G +PDA TY +I +L K A L +EM++
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 568
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 60/435 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I++ + YN +I HC + + M +GL P A ++ +I+G+C + K
Sbjct: 422 DGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEK 481
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A++ EM++K I P +T+++LI LCS ++EA LF EM+ P ++T+ ++
Sbjct: 482 AFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIE 541
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C KAF + M+H G++PD +TY +I GLC GRV A +
Sbjct: 542 GYCKAHNMDKAFELLEDMLHNGLVPD--------TYTYRPLISGLCSTGRVSAAKDFIDD 593
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM------- 263
+ + L + + Y ++ G+C L +A EM ++ + +D V +A L+
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI-NMDLVCHAVLIDGAMKQQ 652
Query: 264 --------------QGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
QGL D Y S+I+AY +G K D M + P+ V +
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIY----DTLIENCSNNE------ 356
+NGL K D HL + M T+ PN + Y D+L + + E
Sbjct: 713 AFMNGLCKVGEI-DRAGHLF----EKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHH 767
Query: 357 --FKSVVG-------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
K ++ L++ F G + EA + M E PD Y+ +I++HCR +
Sbjct: 768 EMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGD 827
Query: 408 VHKAYNMYMEMVRYG 422
V A ++ M+R G
Sbjct: 828 VGAAVELWDTMLRKG 842
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 37/335 (11%)
Query: 18 MVRNGVVCRFTAARNS---ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
+ + G V R S + +++D+ TY ++ C +Q+ + G+ ++ M E G P
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+ ++ G AY+ +++ + G LP+ F Y++LI ALC L +A L++
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYK 382
Query: 135 EMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
M S P +D+T++ L+ + C G A +MI G+ ++ YN++
Sbjct: 383 NMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGI--------RETIYPYNSL 434
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I+G C G + A + M GL P A ++ +ISG+C++ ++ KA++L EM+ K +
Sbjct: 435 INGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494
Query: 252 WGLDEVTYAYLMQGLSD----------------------EDTYASLINAYCAQGELFKVL 289
T+ L+ GL E TY +I YC + K
Sbjct: 495 -APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
L ++M H G +PD+ LI+GL R K
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK 588
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 173/416 (41%), Gaps = 57/416 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D T + +I+ C ++ + + M ++Y +I G C +A
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEAL 273
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
E + + +KG+ D TY +L+ C ++ + L EM+ P + + L+
Sbjct: 274 EVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGL 333
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
+G A+ + ++ G GF P LF YNA+I+ LC +++A + + M
Sbjct: 334 RKKGNIDSAYDL---VVKLGRF-----GFLPNLFVYNALINALCKGEDLDKAELLYKNMH 385
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
M L + V+Y I+I FC+ L A + R + G+ E Y Y
Sbjct: 386 SMNLPLNDVTYSILIDSFCKRGMLDVA---ESYFGRMIEDGIRETIYP-----------Y 431
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
SLIN +C G+L L +M ++G P + + LI+G K + + A
Sbjct: 432 NSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEK---------A 482
Query: 333 DYMYTSM------PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE 385
+Y M P+ + LI CS NE EA++ D M+E
Sbjct: 483 FKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA----------------EASKLFDEMVE 526
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
KP YN++I +C+ N+ KA+ + +M+ G V ++ L++ L G
Sbjct: 527 RKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG 582
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E ++ TY + C + +++ + M +SP++++Y +
Sbjct: 701 TEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMK 760
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A + EM KG+L + TY+ LI+ C RL EA + EM PD IT++T++
Sbjct: 761 EATDLHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C G+ A + M+ KGV PD V +N +I+G C G +++A +
Sbjct: 820 YEHCRSGDVGAAVELWDTMLRKGVEPDSVA--------FNLLIYGCCVNGALDKAFELRN 871
Query: 210 GMPEMGLSPDAV 221
M GL P +
Sbjct: 872 DMLSRGLKPRQI 883
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 182/378 (48%), Gaps = 49/378 (12%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+N ++ C + V + ++ +GL P +S+ +I+G+C ++ + + K M+
Sbjct: 229 FNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVME 288
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
+ I PD FTYS+LI LC + R+ EA LF EM P+ +TFTTL+ C G+
Sbjct: 289 SERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKID 348
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
A M +G+ PD L TYNA+I+GLC G ++EA +L M G PD
Sbjct: 349 LALRNFEIMKDRGIRPD--------LITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG--LDEVTYAYLMQGL----------- 266
+++ ++ G C++ ++ A E+K DR V G LD+V + L+ GL
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIK---DRMVEEGIELDDVAFTALISGLCRDGRVRDAER 457
Query: 267 -----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
D+ TY +I+ +C +G++ L EM G +P V + L+NG
Sbjct: 458 MLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFC 517
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE-NCSNNE------FKSVVGLVKSF- 367
K+ + K+ K +L+ A +PN I ++ L++ +C + F GLV +
Sbjct: 518 KQGQMKNAK---MLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYA 574
Query: 368 SMRGLVNEAARAHDTMLE 385
S LVNE+ + L+
Sbjct: 575 SYTALVNESIKISKDQLK 592
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 149/310 (48%), Gaps = 29/310 (9%)
Query: 19 VRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSY 78
V G V + + SE I D+ TY+ +I C RVE+ G+ M E GL P+ +++
Sbjct: 277 VEEGFVLK--SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTF 334
Query: 79 RYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
+I G C + A M +GI PD TY++LI LC L EA L EM+
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394
Query: 139 ---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
PD ITFTTLM CC +G+ A + +M+ +G+ D V + A+I GL
Sbjct: 395 NGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV--------AFTALISGL 446
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK-VVWGL 254
C GRV +A +L+ M G PD +Y +VI FC+ +++ +L EM R V G+
Sbjct: 447 CRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGV 506
Query: 255 DEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
TY +L+N +C QG++ L M + +P+ + ++L++G
Sbjct: 507 ---------------VTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGH 551
Query: 315 DKKARTKDTK 324
K + D K
Sbjct: 552 CKHGSSVDFK 561
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 172/413 (41%), Gaps = 55/413 (13%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYEFKLEMDQKGILPDAFTYS 114
+E + LR + + S Y++ N+ PG +EF LE+ G P+ + ++
Sbjct: 171 IEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFN 230
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
L+ C + A +F E+ P ++F TL+ C + F + M +
Sbjct: 231 ILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESE 290
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
+ PD +FTY+A+I+GLC RVEEA G+ M EMGL P+ V++ +I G C
Sbjct: 291 RISPD--------VFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 232 QNRELRKAYE-LKVEMDRKVVWGLDEVTYAYLMQGL----------------------SD 268
++ ++ A ++ DR + D +TY L+ GL D
Sbjct: 343 KHGKIDLALRNFEIMKDRGI--RPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
+ T+ +L++ C G++ L + D M +G D V + LI+GL + R +D + L
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+++ P Y T++ +C F +G V A+ M
Sbjct: 461 DMLSAGHKPDDPTY----TMVIDC--------------FCKKGDVKMGAKLLKEMQRDGR 502
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
P YN L+ C++ + A + M+ V + + LL HG
Sbjct: 503 VPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 201/455 (44%), Gaps = 62/455 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E I D++T+N +IK C ++ + +L MA GL PD +++ ++ GF
Sbjct: 160 NEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLN 219
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
A + K +M G L + L+ C + R+ EA E+ PD +TF +L+
Sbjct: 220 GALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLV 279
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C G + A + MI K GF P ++TYN++I G+C LG E+A+ IL+
Sbjct: 280 NGFCRIGNVNDALDIVDFMIEK--------GFDPDVYTYNSLISGMCKLGEFEKAIEILQ 331
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--- 266
M SP+ V+Y +IS C+ E+ A +L + K + D T+ L+QGL
Sbjct: 332 QMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLP-DVCTFNTLIQGLCLS 390
Query: 267 -------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
DE TY+ LI++ C + L + L L EM G ++V+
Sbjct: 391 KNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVY 450
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYM--YTSMPNYIIYDTLIEN-CSNNEFKSVVGLV 364
+ LI+GL K R +D + I D M + + Y+TLI+ C N
Sbjct: 451 NTLIDGLCKSRRIEDAEE-----IFDQMELLGVSRSSVTYNTLIDGLCKNKR-------- 497
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
V EA++ D M+ KPD YN L+ CR ++ KA ++ M G
Sbjct: 498 --------VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE 549
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNL 459
+F+ L+ L G R V LRS +
Sbjct: 550 PDIFTYGTLIGGLCRAG----RVDVASKLLRSVQM 580
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 199/479 (41%), Gaps = 57/479 (11%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
RF + E D T+N ++ C + V + I+ M EKG PD +Y +I+G
Sbjct: 258 RFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGM 317
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C KA E +M + P+ TY++LI ALC + + A L + ++S PD
Sbjct: 318 CKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDV 377
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
TF TL+ CL A M +M +KG PD FTY+ +I LC+ R++
Sbjct: 378 CTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD--------EFTYSILIDSLCYERRLK 429
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYA 260
EAL +L+ M G + +AV Y +I G C++R + A E+ D+ + G+ VTY
Sbjct: 430 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI---FDQMELLGVSRSSVTYN 486
Query: 261 YLMQGL----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
L+ GL D+ TY SL+ +C G++ K + M+
Sbjct: 487 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 546
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
G PD LI GL + R D + LL + P+ Y+ +I+
Sbjct: 547 GCEPDIFTYGTLIGGLCRAGRV-DVASKLLRSVQMKGIVLTPHA--YNPVIQ-------- 595
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN-VHKAYNMYME 417
+ MR E R M+E + PD + ++ C + +A + +E
Sbjct: 596 -------ALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVE 648
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKF 476
M+ G + S L L M + +I + +++ E + + RKF
Sbjct: 649 MLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERETSMIRGFLKIRKF 707
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 56/364 (15%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-PPDDITFTTLMHACCLEGEF 158
++ G +P+A T+++LIQ+ + + + + L PD + ++A + +
Sbjct: 89 QLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKL 148
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+H +M+++G++ D + T+N +I LC ++ A+ +L M GL P
Sbjct: 149 KLVEMLHSKMVNEGIVLD--------VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKP 200
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG--LDEVTYAYLMQGL---------- 266
D +++ ++ GF + +L A ++K +M + +G L V+ L+ G
Sbjct: 201 DEITFTTLMQGFIEEGDLNGALKMKKQM---LGYGCLLTNVSVKVLVNGFCKEGRVEEAL 257
Query: 267 ------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
D+ T+ SL+N +C G + L + D M KG PD + LI+G+
Sbjct: 258 RFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGM 317
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLV 373
K + L +I + PN + Y+TLI C NE ++ L + +GL+
Sbjct: 318 CKLGEFEKAIEILQQMI---LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLL 374
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLAL 433
PD +N LI C N A M+ EM G F+ L
Sbjct: 375 ----------------PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 418
Query: 434 LTAL 437
+ +L
Sbjct: 419 IDSL 422
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 185/409 (45%), Gaps = 52/409 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +L+ + + P+ + Y +I C + +A++
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
EM KGI PD TYS+LI C +L++A LF +M+ PD TF L++A C +
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ + + M+ +G+ P+FV TYN+++ G C + V +A I M + G
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFV--------TYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
++PD SY I+I+GFC+ ++ +A L EM RK + D VTY+ L+ GLS
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYA 419
Query: 271 -----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY S+++A C ++ K + L ++ KG P+ S+LI G
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L + + +D + +++ L+ N + +++ F + GL
Sbjct: 480 LCQSGKLEDARK------------------VFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
NEA M + PD Y ++I ++ A + EM+ G
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 149/288 (51%), Gaps = 27/288 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I+ D+ T+N ++ C ++++G + M ++G+ P+ ++Y ++ G+C + K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q G+ PD +YS +I C ++ EA +LF+EM PD +T+++L+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G S A + QM +GV P + TYN+I+ LC + +V++A+ +L
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGV--------PPTIRTYNSILDALCKIHQVDKAIALLTK 460
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + G+ P+ +Y I+I G CQ+ +L A RKV GL L++G + +
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDA--------RKVFEGL-------LVKGHNLNV 505
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
DTY +I +C +G + L L +M G +PD+ ++I L KK
Sbjct: 506 DTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 191/443 (43%), Gaps = 51/443 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+NKI+ + + + + M +G+ P+ ++ +I FC A+ ++
Sbjct: 88 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFS 159
+ G +PD T+++LI+ LC K ++ +A+ ++++ D I++ TL+H C GE
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
A + ++ V P+ V YN II +C + V EA + M G+SPD
Sbjct: 208 AALDLLQRVDGNLVQPNVV--------MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPD 259
Query: 220 AVSYIIVISGFCQNRELRKAYEL----KVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
V+Y +ISGFC +L A +L +E + V+ + + A+ G E
Sbjct: 260 VVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFD 319
Query: 271 ------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
TY SL++ YC E+ K ++ + M+ G PD S++ING
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF---C 376
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
+ K + L + +P+ + Y +LI+ GL KS G ++ A +
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID-----------GLSKS----GRISYALQ 421
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
D M + P YN ++ C+ V KA + ++ G +M++ L+ L
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLC 481
Query: 439 DHGMYNERSWVIQNTL-RSCNLN 460
G + V + L + NLN
Sbjct: 482 QSGKLEDARKVFEGLLVKGHNLN 504
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 50/390 (12%)
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+SY T F +N A + ++ P AF ++ ++ +L + +L Q+
Sbjct: 51 ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110
Query: 136 ML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
M P+ + L++ C G AF + +++ G +PD +T + +I
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT--------FTTLI 162
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
GLC G++++A + +G D +SY +I G C+ E R A +L +D +V
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222
Query: 253 G--------LDEVTYAYLM------------QGLS-DEDTYASLINAYCAQGELFKVLTL 291
+D + L+ +G+S D TY++LI+ +C G+L + L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
++M + PD ++L+N K + K+ K +++ + PN++ Y++L++
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI---KPNFVTYNSLMDG 339
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
LVK VN+A +TM +G PD Y+++I C+ +A
Sbjct: 340 YC---------LVKE------VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 412 YNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
N++ EM R + + + +L+ L G
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TYN I+ C + +V+K + +L + +KG+ P+ +Y +I G C + A +
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
+ KG + TY+ +IQ C + +EA L +M PD T+ ++ + +
Sbjct: 495 GLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Query: 157 EFSKAFHMHHQMIHKGVLP 175
E A + +MI +GV P
Sbjct: 555 ENDMAEKLLREMIARGVRP 573
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ ++ TY+ +IK C ++E + G+ KG + + +Y +I GFC +
Sbjct: 464 KGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNE 523
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G +PDA TY +I +L K A L +EM++
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 568
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 183/410 (44%), Gaps = 45/410 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ TYN +++ +C + V + + M ++GL PD L+Y +I G+C + +A
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACC 153
E+ K ++P +Y+SLI LC+ R+S L EM PPD +T+ L+ A C
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG +A + M+ KGV P+ V TYNA++ G C V A I M +
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIV--------TYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
GL PD ++Y ++I+G+C+ + +A L EM K + + D +Y
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL--------------IPDIASYN 514
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
SLI+ C G + V L DEM G PD + ++L++ K + D L I +
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF-CKTQPFDKAISLFRQIVE 573
Query: 334 YMYTSM-PNYIIYDT-----------------LIENCSNNEFKSVVGLVKSFSMRGLVNE 375
++ N+ I D L+ CS N ++ L+ + G E
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN-VQTYTILINALCKDGSFGE 632
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
A M + + PD + ++I +R KA + EM+ G V+
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 199/462 (43%), Gaps = 56/462 (12%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+FT + + H A Q +L T+N II C+ + K + + +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+G D +Y +I G N A EM++ + P+ YS+LI LC +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 127 SEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
S+A L ++ D +T+ +L+ CC G + + + +M+ + V PD
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD------ 265
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+T+N +I LC GR+ EA G+L M + G PD V+Y ++ G+C + +A EL
Sbjct: 266 --YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL- 322
Query: 244 VEMDRKVVWGL--DEVTYAYLMQG-----LSDE-----------------DTYASLINAY 279
+R V GL D + Y L+ G + DE +Y SLI+
Sbjct: 323 --FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C G + V L DEM PD V ++LI+ L K+ R + L++++ +
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV---K 437
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
PN + Y+ +++ + +R VN A + M++ +PD YN+LI
Sbjct: 438 PNIVTYNAMMD---------------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+C+ V +A ++ EM + + S +L+ L + G
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 112/243 (46%), Gaps = 31/243 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TYN ++ +CL V I M + GL PD L+Y +I G+C +
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A EM K ++PD +Y+SLI LC+ R+ L EM PD IT+ L+
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
A C F KA + Q++ +G+ PDF T G SP
Sbjct: 554 AFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSP 612
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ TY +I+ LC G EA+ +L M + PDA+++ I+I Q E KA +L+
Sbjct: 613 NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLR 672
Query: 244 VEM 246
EM
Sbjct: 673 EEM 675
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 167/422 (39%), Gaps = 74/422 (17%)
Query: 121 CSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C R + +A F M+ PP F L+ A G + A + Q+ KG+
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGI---- 86
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
SP++ T+ +I+ A +L + + G P+ V++ +I+GFC N +
Sbjct: 87 ----SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIF 142
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGELFKVLTLDDEMS 296
KA + + L QG L D+ TY +LIN G++ L L EM
Sbjct: 143 KALDFCQNL---------------LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNN 355
P+ V+ S LI+GL K D L L + + + Y++LI+ CS
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDA---LGLCSQIGERGILLDAVTYNSLIDGCCSVG 244
Query: 356 EFKSVVG-------------------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
++ V L+ + G + EA M + KPD YN
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL-----TALRDHGMYNERSWVIQ 451
L+ +C R NVH+A ++ MV+ G + + L+ T + D M + +
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Query: 452 NTLRS-----------CNLND-SELHKVLNEIDTRKFPPIGATLLDVLA-EIAMDGLLLD 498
N + + CN S + K+L+E+ PP DV+ I +D L +
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP------DVVTYNILIDALCKE 418
Query: 499 GR 500
GR
Sbjct: 419 GR 420
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 183/410 (44%), Gaps = 45/410 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ TYN +++ +C + V + + M ++GL PD L+Y +I G+C + +A
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACC 153
E+ K ++P +Y+SLI LC+ R+S L EM PPD +T+ L+ A C
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG +A + M+ KGV P+ V TYNA++ G C V A I M +
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIV--------TYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
GL PD ++Y ++I+G+C+ + +A L EM K + + D +Y
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL--------------IPDIASYN 514
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
SLI+ C G + V L DEM G PD + ++L++ K + D L I +
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF-CKTQPFDKAISLFRQIVE 573
Query: 334 YMYTSM-PNYIIYDT-----------------LIENCSNNEFKSVVGLVKSFSMRGLVNE 375
++ N+ I D L+ CS N ++ L+ + G E
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN-VQTYTILINALCKDGSFGE 632
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
A M + + PD + ++I +R KA + EM+ G V+
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 199/462 (43%), Gaps = 56/462 (12%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+FT + + H A Q +L T+N II C+ + K + + +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+G D +Y +I G N A EM++ + P+ YS+LI LC +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 127 SEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
S+A L ++ D +T+ +L+ CC G + + + +M+ + V PD
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD------ 265
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+T+N +I LC GR+ EA G+L M + G PD V+Y ++ G+C + +A EL
Sbjct: 266 --YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL- 322
Query: 244 VEMDRKVVWGL--DEVTYAYLMQG-----LSDE-----------------DTYASLINAY 279
+R V GL D + Y L+ G + DE +Y SLI+
Sbjct: 323 --FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C G + V L DEM PD V ++LI+ L K+ R + L++++ +
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV---K 437
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
PN + Y+ +++ + +R VN A + M++ +PD YN+LI
Sbjct: 438 PNIVTYNAMMD---------------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+C+ V +A ++ EM + + S +L+ L + G
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 40/277 (14%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TYN ++ +CL V I M + GL PD L+Y +I G+C +
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A EM K ++PD +Y+SLI LC+ R+ L EM PD IT+ L+
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
A C F KA + Q++ +G+ PDF T G SP
Sbjct: 554 AFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSP 612
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ TY +I+ LC G EA+ +L M + PDA+++ I+I Q E KA +L+
Sbjct: 613 NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLR 672
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYC 280
EM + GL + +Y L YAS+I YC
Sbjct: 673 EEM---IARGLVNIEKSYFSSILD----YASII--YC 700
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 167/422 (39%), Gaps = 74/422 (17%)
Query: 121 CSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C R + +A F M+ PP F L+ A G + A + Q+ KG+
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGI---- 86
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
SP++ T+ +I+ A +L + + G P+ V++ +I+GFC N +
Sbjct: 87 ----SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIF 142
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGELFKVLTLDDEMS 296
KA + + L QG L D+ TY +LIN G++ L L EM
Sbjct: 143 KALDFCQNL---------------LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNN 355
P+ V+ S LI+GL K D L L + + + Y++LI+ CS
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDA---LGLCSQIGERGILLDAVTYNSLIDGCCSVG 244
Query: 356 EFKSVVG-------------------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
++ V L+ + G + EA M + KPD YN
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL-----TALRDHGMYNERSWVIQ 451
L+ +C R NVH+A ++ MV+ G + + L+ T + D M + +
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Query: 452 NTLRS-----------CNLND-SELHKVLNEIDTRKFPPIGATLLDVLA-EIAMDGLLLD 498
N + + CN S + K+L+E+ PP DV+ I +D L +
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP------DVVTYNILIDALCKE 418
Query: 499 GR 500
GR
Sbjct: 419 GR 420
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 186/417 (44%), Gaps = 52/417 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ Q D +Y +I C + + V +LR + K + P+ + Y +I C ++
Sbjct: 156 AQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVN 215
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
A++ EM K I PD TYSSLI C +L A LF M+S P+ TF+ L+
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C EG+ +A ++ M+ K V D V TYN+++ G C + +V +A +
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVV--------TYNSLMDGYCLVKQVNKAKSLFN 327
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--- 266
M + G++PD SY I+I+GFC+ + + +A +L EM K ++ + VTY L+ GL
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP-NVVTYNSLVDGLCKS 386
Query: 267 -------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
S+ TY S+++A C + K + L ++ KG PD
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTY 446
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
++LINGL K R D + + D L++ S N + + L+ F
Sbjct: 447 TVLINGLCKVGRLDDAQK-----------------VFEDLLVKGYSPNIY-TYTSLINGF 488
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+G +E M + P+ Y +LI + KA + EM+ G +
Sbjct: 489 CNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 128/246 (52%), Gaps = 14/246 (5%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A ++++ D+ TYN ++ +CL+++V K + MA++G++PD SY +I GFC
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKI 351
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+ +A + EM K I P+ TY+SL+ LC R S A L EM P + IT+
Sbjct: 352 KMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITY 411
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+++ A C KA + ++ KG+ PD +FTY +I+GLC +GR+++A
Sbjct: 412 NSILDAICKNNHVDKAIVLLTKIKEKGIQPD--------IFTYTVLINGLCKVGRLDDAQ 463
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQ 264
+ + G SP+ +Y +I+GFC + + +M D + + +TY L+
Sbjct: 464 KVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIP--NAITYEILIH 521
Query: 265 GLSDED 270
L ++D
Sbjct: 522 SLFEKD 527
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 52/337 (15%)
Query: 107 LPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFH 163
+P A + ++ +L ++ A L Q+M PD IT LM+ G +F
Sbjct: 55 IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ +++ KG PD VT + +I GLC G V +AL + G D VSY
Sbjct: 115 VFAKILKKGYHPDAVT--------FTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSY 166
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------------- 266
+I+G C+ E + A +L +D K+V + V Y+ ++ +
Sbjct: 167 GTLINGLCRVGETKAAVQLLRRVDGKLVRP-NVVMYSTIIDSMCKDKLVNDAFDLYCEMV 225
Query: 267 -----SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
D TY+SLI+ +C G+L + L + M P+ S+LI+G K+ + +
Sbjct: 226 SKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVR 285
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
+ K L ++ M + D + N L+ + + VN+A +
Sbjct: 286 EAKNVLAVM--------MKKNVKLDVVTYN----------SLMDGYCLVKQVNKAKSLFN 327
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
M + PD Y+++I C+ V +A ++ EM
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 32/268 (11%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + I+ L + + AL + + M G+ PD ++ ++++ F Q ++ ++ +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
++ +K + D VT+ L++GL C +GE+ K L D++ +G
Sbjct: 116 FAKILKKG-YHPDAVTFTILIKGL-------------CLKGEVHKALYFHDKVVAQGFQL 161
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D V LINGL R +TKA + L+ PN ++Y T+I++ ++
Sbjct: 162 DQVSYGTLINGL---CRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDK------ 212
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
LVN+A + M+ PD Y+ LI C + A +++ M+
Sbjct: 213 ---------LVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263
Query: 423 FVSHMFSVLALLTALRDHGMYNERSWVI 450
++++ L+ G E V+
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVL 291
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 185/407 (45%), Gaps = 48/407 (11%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
AT+N ++ + C + V + + M ++G+ PD +S+ ++ F N G+A + +
Sbjct: 344 ATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEK 403
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGE 157
M G++PD Y+ LI C +S A + EM+ D +T+ TL++ C
Sbjct: 404 MKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKM 463
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A + +M+ +GV PDF +T +IHG C G + +AL + M L
Sbjct: 464 LDDADELFKEMVERGVFPDF--------YTLTTLIHGYCKDGNMTKALSLFETMTLRSLK 515
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD V+Y ++ GFC+ E+ KA EL +M + E+ +Y+ +++ LIN
Sbjct: 516 PDVVTYNTLMDGFCKVGEMEKAKELWYDMISR------EIFPSYI--------SFSILIN 561
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
+C+ G + + L DEM KG P V + +I G + L +I++ +
Sbjct: 562 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGV-- 619
Query: 338 SMPNYIIYDTLIENCSNNE-FKSVVGLVKSFSMRGLV-------------------NEAA 377
P+ I Y+TLI + E F L+ + RGL+ EA
Sbjct: 620 -PPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAE 678
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
M++ PD + Y LI + + N+ +A+ ++ EM++ GFV
Sbjct: 679 MVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFV 725
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 170/392 (43%), Gaps = 51/392 (13%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTA---ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
SF++ + F RNG + R A + D Y +I +C V + +
Sbjct: 380 SFSSIVGVFS---RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 436
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
M E+G D ++Y ++ G C + A E EM ++G+ PD +T ++LI C
Sbjct: 437 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 496
Query: 124 RRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+++A LF+ M PD +T+ TLM C GE KA + + MI + + P ++
Sbjct: 497 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYI-- 554
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+++ +I+G C LG V EA + M E G+ P V+ +I G+ + L KA
Sbjct: 555 ------SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 608
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ M + +G+ D TY +LIN++ + + L + M +G
Sbjct: 609 DFLNTM---------------ISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 653
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
LP+ V + ++ G + R ++ + ++ +I+ N + +
Sbjct: 654 LLPNLVTYNAILGGFSRHGRMQEAE------------------MVLHKMIDKGINPDKST 695
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
L+ + + + EA R HD ML+ + PD
Sbjct: 696 YTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 727
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 177/433 (40%), Gaps = 86/433 (19%)
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACCLEGEFSKAFHMHHQMIH 170
++L+ A+ + A+ ++++ + + + T +++A C +G+ +M
Sbjct: 207 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 266
Query: 171 KGVLPDFVT---------------------------GFSPALFTYNAIIHGLCFLGRVEE 203
KGV D VT G P LFTYNA+I+GLC G E
Sbjct: 267 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 326
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A +L M +GL P+A ++ ++ C+ + VW + V L
Sbjct: 327 AKRVLDEMLGVGLCPNAATFNPMLVESCRKED---------------VWEAERVFNEMLQ 371
Query: 264 QG-LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+G + D +++S++ + GEL + L ++M G +PD+VI ++LING R D
Sbjct: 372 RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY---CRNDD 428
Query: 323 TKAHLLL---------IIADYMYTSMPNYI-----------IYDTLIENCSNNEFKSVVG 362
L + ++ Y ++ N + ++ ++E +F ++
Sbjct: 429 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 488
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ + G + +A +TM + KPD YN L+ C+ + KA ++ +M+
Sbjct: 489 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 548
Query: 423 FVSHMFSVLALLTALRDHGMYNE--RSW------VIQNTLRSCNL---------NDSELH 465
S L+ G+ +E R W I+ TL +CN N S+ +
Sbjct: 549 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 608
Query: 466 KVLNEIDTRKFPP 478
LN + + PP
Sbjct: 609 DFLNTMISEGVPP 621
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF ++ NA++ + +G V+ A + + G + + I+++ C++ +L
Sbjct: 198 GFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNV 257
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
EM+ K V+ +D TY +L+NAYC +G + + L D M+ KG
Sbjct: 258 GVYLSEMEEKGVY--------------ADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 303
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDT-LIENCSNNE- 356
P + LINGL K+ + K ++ + + + PN ++ L+E+C +
Sbjct: 304 LKPGLFTYNALINGLCKEGSYERAKR----VLDEMLGVGLCPNAATFNPMLVESCRKEDV 359
Query: 357 ---------------------FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
F S+VG+ FS G + A + M PD +Y
Sbjct: 360 WEAERVFNEMLQRGVVPDLISFSSIVGV---FSRNGELGRALAYFEKMKGVGLVPDTVIY 416
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+LI +CR +V A M EMV G V + + LL L
Sbjct: 417 TILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL 458
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
SE + D TYN +I + ++ ++ M E+GL P+ ++Y ++ GF +
Sbjct: 616 SEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQ 675
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
+A +M KGI PD TY+SLI SK + EA+ + EML PDD
Sbjct: 676 EAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 728
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 181/413 (43%), Gaps = 52/413 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q + TY +I C M + +LR + K ++ D + Y +I C ++ AYE
Sbjct: 160 QLNQVTYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVIDAYE 219
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM K I PD T++SLI C RL EA+ LF +M+ P+D TF L+ A C
Sbjct: 220 LYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALC 279
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG A + MI + PD V TYN+++ G C + V +A +L +
Sbjct: 280 KEGNVKGAKNALAMMIKGSIKPDVV--------TYNSLMDGYCLVNEVNKAKHVLSTIAR 331
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
MG++PDA SY I+I+GFC+ + + +A L EM R + VTY L+ GL
Sbjct: 332 MGVAPDAQSYNIMINGFCKIKMVNEALSLFNEM-RCQRISPNTVTYNSLIDGLCKSGRIS 390
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D TY+SLI+A C L K + L ++ +G P+ ++LI
Sbjct: 391 HAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILI 450
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+GL K R K+ + + D L + S N ++ L+ G
Sbjct: 451 DGLCKGGRLKNAQD-----------------VFQDLLTKGYSLN-IRTYNILINGLCKEG 492
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
L ++A M + + P+ Y +I + KA + EMV G +
Sbjct: 493 LFDKAEALLSKMEDNDINPNVVTYETIIRSLFYKDYNEKAEKLLREMVARGLL 545
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 12/239 (5%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
SI+ D+ TYN ++ +CL+ V K +L +A G++PDA SY +I GFC + +A
Sbjct: 298 SIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEA 357
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHA 151
EM + I P+ TY+SLI LC R+S A+ L EM PPD T+++L+ A
Sbjct: 358 LSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDA 417
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C KA + ++ +G+ P+ ++TYN +I GLC GR++ A + + +
Sbjct: 418 LCKNNHLDKAIALVKKIKDQGIQPN--------MYTYNILIDGLCKGGRLKNAQDVFQDL 469
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
G S + +Y I+I+G C+ KA L +M+ + + VTY +++ L +D
Sbjct: 470 LTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDI-NPNVVTYETIIRSLFYKD 527
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 154/352 (43%), Gaps = 46/352 (13%)
Query: 72 SPDALSYRYVITGFCNNRCP-GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
+P + + ++T + F +M GI+P T +I C R ++ A+
Sbjct: 54 TPSIVEFNKILTSLVKTKTHYNTVISFFRKMQFNGIVPSIVTLGIVINCYCHLREINFAF 113
Query: 131 HLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
LF ++L PD IT TL+ CL G+ +A H H +++ GF T
Sbjct: 114 SLFGKILKMGYQPDTITLNTLVKGFCLNGKVKEALHFHDRVL--------ALGFQLNQVT 165
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
Y +I+GLC +G AL +LR + ++ D V Y I+I C+++ + AYEL EM
Sbjct: 166 YATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVIDAYELYSEMI 225
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
K + D T+ SLI +C G L + L +M K P+
Sbjct: 226 AKTIS--------------PDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTF 271
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKS 366
++L++ L K+ K K L ++I + P+ + Y++L++ C NE
Sbjct: 272 NILVDALCKEGNVKGAKNALAMMIKGSI---KPDVVTYNSLMDGYCLVNE---------- 318
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
VN+A T+ PD YN++I C+ V++A +++ EM
Sbjct: 319 ------VNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEM 364
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I + TYN +I C R+ ++ M G PD +Y +I C N K
Sbjct: 367 QRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDK 426
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMH 150
A ++ +GI P+ +TY+ LI LC RL A +FQ++L+ + T+ L++
Sbjct: 427 AIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILIN 486
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C EG F KA + +M + P+ V TY II L + E+A +LR
Sbjct: 487 GLCKEGLFDKAEALLSKMEDNDINPNVV--------TYETIIRSLFYKDYNEKAEKLLRE 538
Query: 211 MPEMGL 216
M GL
Sbjct: 539 MVARGL 544
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 186/401 (46%), Gaps = 55/401 (13%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
LR F A K F+ M ++++ D TYN I + C +R+E+ G+L
Sbjct: 264 LRGKFEAASKIFKTM-------------KDKNLKPDCYTYNSFISRLCKERRIEEASGVL 310
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
+ E GL P+A++Y +I G CN KA+ ++ EM +GI+ FTY+ LI AL +
Sbjct: 311 CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE 370
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+R+ EA + +EM PD +T+ ++ C G KA + +M+ K +
Sbjct: 371 KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI------- 423
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P + TY ++I R+ EA + + G+ PD + + +I G C N + +A+
Sbjct: 424 -RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+L EMD V DEVT+ LMQG YC + ++ + L DEM +G
Sbjct: 483 QLLKEMDNAKVVP-DEVTFNTLMQG-------------YCRERKVEEAKKLLDEMKERGI 528
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM--PNYIIYDTLIENCSN-NEF 357
PD + + LI+G K+ KD L + D M + P + Y+ LI+ S E
Sbjct: 529 KPDHISYNTLISGYSKRGDMKDA-----LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEA 583
Query: 358 KSVVGLVKSFSMRGL---------VNEAARAHDTMLEGNYK 389
L++ +G+ V EA + +D ++E + K
Sbjct: 584 DHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDDK 624
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 195/455 (42%), Gaps = 60/455 (13%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
+ ARN +++ L ++ ++ +C ++ ++ + L M E + P + +++
Sbjct: 134 ELSLARNRLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLL 192
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
A+ EM + I T++ +I LC + + +A M P+
Sbjct: 193 LKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNV 252
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+T+ T+++ CL G+F A + M K + PD +TYN+ I LC R+E
Sbjct: 253 VTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPD--------CYTYNSFISRLCKERRIE 304
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAY 261
EA G+L + E GL P+AV+Y +I G C +L KA+ + EM +R +V + TY
Sbjct: 305 EASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASV--FTYNL 362
Query: 262 LMQGL----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
L+ L D TY IN YC G K L+L DEM K
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE-NCSNNEFK 358
P + LI+ K+ R + + I + M +P+ I+++ LI+ +C N
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM---LPDIIMFNALIDGHCVNGNID 479
Query: 359 SVVGLVKSFS--------------MRGL-----VNEAARAHDTMLEGNYKPDGAVYNLLI 399
L+K M+G V EA + D M E KPD YN LI
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+ +R ++ A ++ EM+ GF + + AL+
Sbjct: 540 SGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 201/413 (48%), Gaps = 45/413 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D T+N +IK C+ +V++ + + G D +SY +I G C A +
Sbjct: 130 QPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQ 189
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+++ K + + YS++I +LC + ++EAY L+ EM++ P+ +TF +L++ C
Sbjct: 190 MLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFC 249
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+F AF + H+++ K + PD ++T+N ++ LC G+++EA ++ M +
Sbjct: 250 IVGQFKDAFRLFHEIVLKNINPD--------VYTFNIMVDALCKEGKMKEAKSVIAVMMK 301
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+ PD V+Y ++ G+C E+ KA + + + + ++ D +Y+
Sbjct: 302 ECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISK--------------IRVAPDAHSYS 347
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+IN C + + L+L EM +G P++V S LI+GL K R L+
Sbjct: 348 IMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWD---LVDEM 404
Query: 334 YMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ + PN Y++LI+ C N++ + LVK +G+ +PD
Sbjct: 405 HDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGI----------------QPDM 448
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI C+ +H A +++ +++ G+ + + ++ L G+++E
Sbjct: 449 CTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDE 501
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E + D+ TYN ++ +CL+ V K +L +++ ++PDA SY +I G C
Sbjct: 297 AVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKV 356
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM +GI P+ TYSSLI LC R S A+ L EM PP+ T+
Sbjct: 357 KMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTY 416
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
+L+ A C + KA + ++ +G+ PD T
Sbjct: 417 NSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLI 476
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G+S + TYN +I+GLC +G +EA +L M + G+ PDAV+Y +I F E K
Sbjct: 477 KGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEK 536
Query: 239 AYELKVEM 246
A +L EM
Sbjct: 537 AEKLLREM 544
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 27/303 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D+ T+N ++ C ++++ ++ M ++ + PD ++Y ++ G+C K
Sbjct: 267 KNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNK 326
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + + + + PDA +YS +I LC + + EA LF EM P+ +T+++L+
Sbjct: 327 AKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLID 386
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G +S A+ + +M H G P +FTYN++I LC ++++A+ +++
Sbjct: 387 GLCKSGRYSYAWDLVDEM-HDH-------GHPPNIFTYNSLIDALCKNHQIDKAIALVKK 438
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + G+ PD +Y I+I G C+ L A R V L L++G S D
Sbjct: 439 IKDQGIQPDMCTYNILIDGLCKGGRLHNA--------RDVFQDL-------LIKGYSLDV 483
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +IN C G + L +M G +PD+V +I K + + L
Sbjct: 484 QTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLRE 543
Query: 330 IIA 332
+IA
Sbjct: 544 MIA 546
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 43/392 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ Y+ II C + V + + M K +SP+ +++ +I GFC A+
Sbjct: 199 VNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAF 258
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E+ K I PD +T++ ++ ALC + ++ EA + M+ PD +T+ +LM
Sbjct: 259 RLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGY 318
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL E +KA H+ + V PD +Y+ +I+GLC + V+EAL + M
Sbjct: 319 CLVNEVNKAKHVLIIISKIRVAPD--------AHSYSIMINGLCKVKMVDEALSLFYEMR 370
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
G++P+ V+Y +I G C++ A++L EM G + TY
Sbjct: 371 CRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDH---GHPPNIF-----------TY 416
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
SLI+A C ++ K + L ++ +G PD ++LI+GL K R + +
Sbjct: 417 NSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARD------- 469
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ D LI+ S + ++ ++ GL +EA M + PD
Sbjct: 470 ----------VFQDLLIKGYS-LDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDA 518
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y +I + KA + EM+ G +
Sbjct: 519 VTYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 52/332 (15%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD +TF L++ C E +F M +++ G PD +T +N +I GLC G
Sbjct: 96 PDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTIT--------FNTLIKGLCVNG 147
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+V+EAL + +G D VSY +I+G C+ E R A ++ +++ K+V + V Y
Sbjct: 148 KVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLV-NTNVVMY 206
Query: 260 AYLMQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSH 297
+ ++ L + T+ SLI +C G+ L E+
Sbjct: 207 STIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVL 266
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNE 356
K PD +++++ L K+ + K+ K+ + +++ + + MP+ + Y++L++ C NE
Sbjct: 267 KNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECV---MPDVVTYNSLMDGYCLVNE 323
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
VN+A + + PD Y+++I C+ V +A +++
Sbjct: 324 ----------------VNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFY 367
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
EM G + + +L+ L G Y+ +W
Sbjct: 368 EMRCRGIAPNTVTYSSLIDGLCKSGRYS-YAW 398
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 182 SPALFTYNAIIHGLCFLGR--VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
SP++ +N I+ L A+ + + G++PD V++ I+I+ +C RE+ +
Sbjct: 58 SPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHLREMDFS 117
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ + ++ K+ + D +T+ L++GL C G++ + L D + G
Sbjct: 118 FSMLAKI-LKMGYQPDTITFNTLIKGL-------------CVNGKVKEALHFHDHVISLG 163
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
D V LINGL K T+ L I + T N ++Y T+I++ ++
Sbjct: 164 FHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNT---NVVMYSTIIDSLCKDK--- 217
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
LV EA + M+ P+ +N LI+ C A+ ++ E+V
Sbjct: 218 ------------LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIV 265
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLND 461
+++ ++ AL G E VI ++ C + D
Sbjct: 266 LKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPD 307
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 201/413 (48%), Gaps = 45/413 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D T+N +IK C+ +V++ + + G D +SY +I G C A +
Sbjct: 130 QPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQ 189
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+++ K + + YS++I +LC + ++EAY L+ EM++ P+ +TF +L++ C
Sbjct: 190 MLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFC 249
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+F AF + H+++ K + PD ++T+N ++ LC G+++EA ++ M +
Sbjct: 250 IVGQFKDAFRLFHEIVLKNINPD--------VYTFNIMVDALCKEGKMKEAKSVIAVMMK 301
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+ PD V+Y ++ G+C E+ KA + + + + ++ D +Y+
Sbjct: 302 ECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISK--------------IRVAPDAHSYS 347
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+IN C + + L+L EM +G P++V S LI+GL K R L+
Sbjct: 348 IMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWD---LVDEM 404
Query: 334 YMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ + PN Y++LI+ C N++ + LVK +G+ +PD
Sbjct: 405 HDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGI----------------QPDM 448
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI C+ +H A +++ +++ G+ + + ++ L G+++E
Sbjct: 449 CTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDE 501
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E + D+ TYN ++ +CL+ V K +L +++ ++PDA SY +I G C
Sbjct: 297 AVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKV 356
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM +GI P+ TYSSLI LC R S A+ L EM PP+ T+
Sbjct: 357 KMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTY 416
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
+L+ A C + KA + ++ +G+ PD T
Sbjct: 417 NSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLI 476
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G+S + TYN +I+GLC +G +EA +L M + G+ PDAV+Y +I F E K
Sbjct: 477 KGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEK 536
Query: 239 AYELKVEM 246
A +L EM
Sbjct: 537 AEKLLREM 544
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 27/303 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D+ T+N ++ C ++++ ++ M ++ + PD ++Y ++ G+C K
Sbjct: 267 KNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNK 326
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + + + + PDA +YS +I LC + + EA LF EM P+ +T+++L+
Sbjct: 327 AKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLID 386
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G +S A+ + +M H G P +FTYN++I LC ++++A+ +++
Sbjct: 387 GLCKSGRYSYAWDLVDEM-HDH-------GHPPNIFTYNSLIDALCKNHQIDKAIALVKK 438
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + G+ PD +Y I+I G C+ L A R V L L++G S D
Sbjct: 439 IKDQGIQPDMCTYNILIDGLCKGGRLHNA--------RDVFQDL-------LIKGYSLDV 483
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +IN C G + L +M G +PD+V +I K + + L
Sbjct: 484 QTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLRE 543
Query: 330 IIA 332
+IA
Sbjct: 544 MIA 546
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 43/392 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ Y+ II C + V + + M K +SP+ +++ +I GFC A+
Sbjct: 199 VNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAF 258
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E+ K I PD +T++ ++ ALC + ++ EA + M+ PD +T+ +LM
Sbjct: 259 RLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGY 318
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL E +KA H+ + V PD +Y+ +I+GLC + V+EAL + M
Sbjct: 319 CLVNEVNKAKHVLIIISKIRVAPD--------AHSYSIMINGLCKVKMVDEALSLFYEMR 370
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
G++P+ V+Y +I G C++ A++L EM G + TY
Sbjct: 371 CRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDH---GHPPNIF-----------TY 416
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
SLI+A C ++ K + L ++ +G PD ++LI+GL K R + +
Sbjct: 417 NSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARD------- 469
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ D LI+ S + ++ ++ GL +EA M + PD
Sbjct: 470 ----------VFQDLLIKGYS-LDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDA 518
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y +I + KA + EM+ G +
Sbjct: 519 VTYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 52/332 (15%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD +TF L++ C E +F M +++ G PD +T +N +I GLC G
Sbjct: 96 PDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTIT--------FNTLIKGLCVNG 147
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+V+EAL + +G D VSY +I+G C+ E R A ++ +++ K+V + V Y
Sbjct: 148 KVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLV-NTNVVMY 206
Query: 260 AYLMQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSH 297
+ ++ L + T+ SLI +C G+ L E+
Sbjct: 207 STIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVL 266
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNE 356
K PD +++++ L K+ + K+ K+ + +++ + + MP+ + Y++L++ C NE
Sbjct: 267 KNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECV---MPDVVTYNSLMDGYCLVNE 323
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
VN+A + + PD Y+++I C+ V +A +++
Sbjct: 324 ----------------VNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFY 367
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
EM G + + +L+ L G Y+ +W
Sbjct: 368 EMRCRGIAPNTVTYSSLIDGLCKSGRYS-YAW 398
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 182 SPALFTYNAIIHGLCFLGR--VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
SP++ +N I+ L A+ + + G++PD V++ I+I+ +C RE+ +
Sbjct: 58 SPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHLREMDFS 117
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ + ++ K+ + D +T+ L++GL C G++ + L D + G
Sbjct: 118 FSMLAKI-LKMGYQPDTITFNTLIKGL-------------CVNGKVKEALHFHDHVISLG 163
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
D V LINGL K T+ L I + T N ++Y T+I++ ++
Sbjct: 164 FHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNT---NVVMYSTIIDSLCKDK--- 217
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
LV EA + M+ P+ +N LI+ C A+ ++ E+V
Sbjct: 218 ------------LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIV 265
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLND 461
+++ ++ AL G E VI ++ C + D
Sbjct: 266 LKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPD 307
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 201/413 (48%), Gaps = 45/413 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D T+N +IK C+ +V++ + + G D +SY +I G C A +
Sbjct: 130 QPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQ 189
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+++ K + + YS++I +LC + ++EAY L+ EM++ P+ +TF +L++ C
Sbjct: 190 MLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFC 249
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+F AF + H+++ K + PD ++T+N ++ LC G+++EA ++ M +
Sbjct: 250 IVGQFKDAFRLFHEIVLKNINPD--------VYTFNIMVDALCKEGKMKEAKSVIAVMMK 301
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+ PD V+Y ++ G+C E+ KA + + + + ++ D +Y+
Sbjct: 302 ECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISK--------------IRVAPDAHSYS 347
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+IN C + + L+L EM +G P++V S LI+GL K R L+
Sbjct: 348 IMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWD---LVDEM 404
Query: 334 YMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ + PN Y++LI+ C N++ + LVK +G+ +PD
Sbjct: 405 HDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGI----------------QPDM 448
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI C+ +H A +++ +++ G+ + + ++ L G+++E
Sbjct: 449 CTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDE 501
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E + D+ TYN ++ +CL+ V K +L +++ ++PDA SY +I G C
Sbjct: 297 AVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKV 356
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM +GI P+ TYSSLI LC R S A+ L EM PP+ T+
Sbjct: 357 KMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTY 416
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
+L+ A C + KA + ++ +G+ PD T
Sbjct: 417 NSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLI 476
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G+S + TYN +I+GLC +G +EA +L M + G+ PDAV+Y +I F E K
Sbjct: 477 KGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEK 536
Query: 239 AYELKVEM 246
A +L EM
Sbjct: 537 AEKLLREM 544
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 27/303 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D+ T+N ++ C ++++ ++ M ++ + PD ++Y ++ G+C K
Sbjct: 267 KNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNK 326
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + + + + PDA +YS +I LC + + EA LF EM P+ +T+++L+
Sbjct: 327 AKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLID 386
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G +S A+ + +M H G P +FTYN++I LC ++++A+ +++
Sbjct: 387 GLCKSGRYSYAWDLVDEM-HDH-------GHPPNIFTYNSLIDALCKNHQIDKAIALVKK 438
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + G+ PD +Y I+I G C+ L A R V L L++G S D
Sbjct: 439 IKDQGIQPDMCTYNILIDGLCKGGRLHNA--------RDVFQDL-------LIKGYSLDV 483
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +IN C G + L +M G +PD+V +I K + + L
Sbjct: 484 QTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLRE 543
Query: 330 IIA 332
+IA
Sbjct: 544 MIA 546
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 43/392 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ Y+ II C + V + + M K +SP+ +++ +I GFC A+
Sbjct: 199 VNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAF 258
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E+ K I PD +T++ ++ ALC + ++ EA + M+ PD +T+ +LM
Sbjct: 259 RLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGY 318
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL E +KA H+ + V PD +Y+ +I+GLC + V+EAL + M
Sbjct: 319 CLVNEVNKAKHVLIIISKIRVAPD--------AHSYSIMINGLCKVKMVDEALSLFYEMR 370
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
G++P+ V+Y +I G C++ A++L EM G + TY
Sbjct: 371 CRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDH---GHPPNIF-----------TY 416
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
SLI+A C ++ K + L ++ +G PD ++LI+GL K R + +
Sbjct: 417 NSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARD------- 469
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ D LI+ S + ++ ++ GL +EA M + PD
Sbjct: 470 ----------VFQDLLIKGYS-LDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDA 518
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y +I + KA + EM+ G +
Sbjct: 519 VTYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 52/332 (15%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD +TF L++ C E +F M +++ G PD +T +N +I GLC G
Sbjct: 96 PDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTIT--------FNTLIKGLCVNG 147
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+V+EAL + +G D VSY +I+G C+ E R A ++ +++ K+V + V Y
Sbjct: 148 KVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLV-NTNVVMY 206
Query: 260 AYLMQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSH 297
+ ++ L + T+ SLI +C G+ L E+
Sbjct: 207 STIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVL 266
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNE 356
K PD +++++ L K+ + K+ K+ + +++ + + MP+ + Y++L++ C NE
Sbjct: 267 KNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECV---MPDVVTYNSLMDGYCLVNE 323
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
VN+A + + PD Y+++I C+ V +A +++
Sbjct: 324 ----------------VNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFY 367
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
EM G + + +L+ L G Y+ +W
Sbjct: 368 EMRCRGIAPNTVTYSSLIDGLCKSGRYS-YAW 398
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 182 SPALFTYNAIIHGLCFLGR--VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
SP++ +N I+ L A+ + + G++PD V++ I+I+ +C RE+ +
Sbjct: 58 SPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHLREMDFS 117
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ + ++ K+ + D +T+ L++GL C G++ + L D + G
Sbjct: 118 FSMLAKI-LKMGYQPDTITFNTLIKGL-------------CVNGKVKEALHFHDHVISLG 163
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
D V LINGL K T+ L I + T N ++Y T+I++ ++
Sbjct: 164 FHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNT---NVVMYSTIIDSLCKDK--- 217
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
LV EA + M+ P+ +N LI+ C A+ ++ E+V
Sbjct: 218 ------------LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIV 265
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLND 461
+++ ++ AL G E VI ++ C + D
Sbjct: 266 LKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPD 307
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 183/411 (44%), Gaps = 52/411 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TY +I C M + ++ + +LR + K ++ + + Y VI C ++ AYE
Sbjct: 165 DQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELY 224
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I P T+S+LI C +L EA+ L +M+ PD TF L+ A C E
Sbjct: 225 SEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKE 284
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ A M+ +GV+PD V TYN+I+ G C + V +A +L + +G
Sbjct: 285 GDVKGAKSFLVVMMKEGVIPDVV--------TYNSIMDGHCLVNEVNKAKHLLSIISRIG 336
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
++P A SY I+I+GFC+ + + +A L EM + + + VTY+ L+ GL
Sbjct: 337 VAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGI-APNTVTYSSLIDGLCKSGRFSCA 395
Query: 271 -----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY+SLI+A C L K +TL ++ +G PD ++LI+G
Sbjct: 396 WELVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDG 455
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L K R K+ + + D L + S N +S L+ GL
Sbjct: 456 LCKGGRLKNAQD-----------------VFQDLLTKGYSLN-IRSYNILINGLCKDGLF 497
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
++A M + PD Y +I + KA + EM+ G +
Sbjct: 498 DKAEALLSKMKGNDVIPDAVTYETIIHSLFYKDENEKAEKLLREMLGRGLL 548
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F E + D+ TYN I+ HCL+ V K +L ++ G++P A SY +I GFC
Sbjct: 293 FLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFC 352
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDI 143
+ +A EM +GI P+ TYSSLI LC R S A+ L EM PP+
Sbjct: 353 KIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIF 412
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
T+++L+ A C KA + ++ +G+ PD ++TYN +I GLC GR++
Sbjct: 413 TYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPD--------MYTYNILIDGLCKGGRLKN 464
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A + + + G S + SY I+I+G C++ KA L +M V D VTY ++
Sbjct: 465 AQDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIP-DAVTYETII 523
Query: 264 QGLSDED 270
L +D
Sbjct: 524 HSLFYKD 530
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 202/438 (46%), Gaps = 58/438 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ ++ + + +I +C + ++ IL + + G P+ +++ ++ G C N +A
Sbjct: 92 IKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAI 151
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G D TY +LI LC + EA + + + L + + + T++ +
Sbjct: 152 HFHDHVLALGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSL 211
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + S A+ ++ +MI K + SP + T++A+I+G C +G+++EA G++ M
Sbjct: 212 CKDKLVSDAYELYSEMITKKI--------SPTVVTFSALIYGFCIVGQLKEAFGLVHQMV 263
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG--LSDED 270
++PD ++ I++ C+ +++ A V M ++ V D VTY +M G L +E
Sbjct: 264 LKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIP-DVVTYNSIMDGHCLVNEV 322
Query: 271 --------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+Y+ +IN +C + + L+L EM +G P++V S L
Sbjct: 323 NKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSL 382
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIEN-CSNNEFKSVVGLVKSF 367
I+GL K R + D M+ + PN Y +LI+ C NN + LVK
Sbjct: 383 IDGLCKSGRFSCAWE-----LVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKI 437
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
+G+ +PD YN+LI C+ + A +++ +++ G+ ++
Sbjct: 438 KDQGI----------------QPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNI 481
Query: 428 FSVLALLTALRDHGMYNE 445
S L+ L G++++
Sbjct: 482 RSYNILINGLCKDGLFDK 499
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 160/349 (45%), Gaps = 45/349 (12%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+++ GI P+ + S LI C ++ A+ + ++ P+ ITF TLM CL G
Sbjct: 86 QLEFNGIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNG 145
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ ++A H H ++ GF TY +I+GLC +G+ +EAL +LR + +
Sbjct: 146 KVNEAIHFHDHVL--------ALGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLV 197
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
+ + V Y VI C+++ + AYEL EM K + T+++LI
Sbjct: 198 NTNVVMYNTVIDSLCKDKLVSDAYELYSEMITKKIS--------------PTVVTFSALI 243
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+C G+L + L +M K PD ++L++ L K+ K K+ L++++ + +
Sbjct: 244 YGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGV- 302
Query: 337 TSMPNYIIYDTLIE-NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+P+ + Y+++++ +C NE VN+A + P Y
Sbjct: 303 --IPDVVTYNSIMDGHCLVNE----------------VNKAKHLLSIISRIGVAPSAYSY 344
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYN 444
+++I C+ + +A +++ EM G + + +L+ L G ++
Sbjct: 345 SIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFS 393
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 62/321 (19%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I + T++ +I C++ ++++ G++ M K ++PD ++ ++ C
Sbjct: 229 TKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVK 288
Query: 93 KAYEFKLEMDQKGILPDAFTYSS-----------------------------------LI 117
A F + M ++G++PD TY+S +I
Sbjct: 289 GAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMI 348
Query: 118 QALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
C + + EA LF EM P+ +T+++L+ C G FS A+ + +M
Sbjct: 349 NGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEM------ 402
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
V G P +FTY+++I LC +++A+ +++ + + G+ PD +Y I+I G C+
Sbjct: 403 --HVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGG 460
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDD 293
L+ A +V L +G S + +Y LIN C G K L
Sbjct: 461 RLKNA---------------QDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLS 505
Query: 294 EMSHKGSLPDSVIDSLLINGL 314
+M +PD+V +I+ L
Sbjct: 506 KMKGNDVIPDAVTYETIIHSL 526
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ D+ TYN +I C R++ + + + KG S + SY +I G C + K
Sbjct: 440 QGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDK 499
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M ++PDA TY ++I +L K +A L +EML
Sbjct: 500 AEALLSKMKGNDVIPDAVTYETIIHSLFYKDENEKAEKLLREML 543
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 181/392 (46%), Gaps = 45/392 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+Q ++ YN II C ++ V + + M KG+SPD ++Y +I+GFC A
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ +M + I P+ +T++ L+ C +RRL EA ++ M+ PD T+ +LM
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL E +KA H+ + + +GV +P + +Y+ +IHG C + +V+EA+ + + M
Sbjct: 328 CLVKEVNKAKHIFNTISQRGV--------NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMH 379
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSDEDT 271
+ PD V+Y +I G C+ ++ A +L EM DR V D+ T
Sbjct: 380 CNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH---------------DKIT 424
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y S+++A C ++ K + L +M +G PD + L++GL K R +D +
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR------- 477
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
I+++ L+ + +++ F GL +E+ M E P+
Sbjct: 478 -----------IVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
Y ++I + KA + EM+ G
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 153/318 (48%), Gaps = 35/318 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I D+ TYN +I C++ +++ + M + ++P+ ++ ++ GFC R
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A M ++GI PD FTY+SL+ C + +++A H+F + P+ +++ ++
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H C + +A ++ +M ++PD V TYN++I GLC LG++ AL ++
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVV--------TYNSLIDGLCKLGKISYALKLVD 411
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-- 267
M + G+ D ++Y ++ C+N ++ KA L +M + + D TY L+ GL
Sbjct: 412 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP-DICTYTTLVDGLCKN 470
Query: 268 --------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
D + Y ++I +C+ G + L L +M G +P++V
Sbjct: 471 GRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTY 530
Query: 308 SLLINGL-DKKARTKDTK 324
++I L DK K K
Sbjct: 531 EIIICSLFDKDENDKAEK 548
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 191/434 (44%), Gaps = 50/434 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I DL + +I + + +L + + G P+ ++ +I G C +A
Sbjct: 103 ITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL 162
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
+F ++ G + +Y +LI LC + S A L + + L P+ + + T++ +
Sbjct: 163 QFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C ++AF ++ +M+ KG+ PD V TYNA+I G C +G++++A + M
Sbjct: 223 CKVKLVNEAFDLYSEMVSKGISPDVV--------TYNALISGFCIVGKMKDATDLFNKMI 274
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDT 271
++P+ ++ I++ GFC+ R L++A + M + QG+ D T
Sbjct: 275 FENINPNVYTFNILVDGFCKERRLKEAKNVLAMM---------------MKQGIKPDVFT 319
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y SL++ YC E+ K + + +S +G P+ S++I+G + K + L
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF---CKIKKVDEAMNLFK 376
Query: 332 ADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL------------------ 372
+ +P+ + Y++LI+ C + + LV RG+
Sbjct: 377 EMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNH 436
Query: 373 -VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
V++A M + +PD Y L+ C+ + A ++ +++ G++ +
Sbjct: 437 QVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYT 496
Query: 432 ALLTALRDHGMYNE 445
A++ HG+++E
Sbjct: 497 AMIQGFCSHGLFDE 510
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 150/347 (43%), Gaps = 52/347 (14%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
F + QK P F + ++ +L S L ++M D + + L++
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ +F + +++ G+ P + T +I GLC G++ +AL +
Sbjct: 119 QLGQNPLSFSVLAKILK--------MGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVA 170
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG--------LDEVTYAYLM-- 263
+G + VSY +I+G C+ + A +L +D K+V +D + L+
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230
Query: 264 ----------QGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
+G+S D TY +LI+ +C G++ L ++M + P+ ++L++
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG 371
G K+ R K+ K L +++ + P+ Y++L++ C LVK
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGI---KPDVFTYNSLMDRYC----------LVKE----- 332
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
VN+A +T+ + P+ Y+++I C+ V +A N++ EM
Sbjct: 333 -VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D TYN I+ C +V+K + +L M ++G+ PD +Y ++ G C N G+
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN---GRLE 474
Query: 96 EFKLEMDQ---KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+ ++ + KG + D Y+++IQ CS E+ L +M P+ +T+ ++
Sbjct: 475 DARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVL 174
+ + E KA + +MI +G+
Sbjct: 535 CSLFDKDENDKAEKLLREMITRGLF 559
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 128/322 (39%), Gaps = 57/322 (17%)
Query: 122 SKRRLSEAYHLFQEMLSP-PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+K L +++ +P P F ++ + +S +H QM G+ D V
Sbjct: 51 NKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI- 109
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+ +I+ LG+ + +L + +MG P+ ++ +I G C ++ +A
Sbjct: 110 -------LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL 162
Query: 241 ELKVEMDRKVVWG--LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
+ D+ V G L++V+Y +LIN C G+ L L + K
Sbjct: 163 QFH---DKVVALGFHLNKVSYG-------------TLINGLCKVGQTSAALQLLRRVDGK 206
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENC 352
P+ V+ + +I+ + K + A +Y+ M P+ + Y+ LI
Sbjct: 207 LVQPNVVMYNTIIDSMCKVKLVNE---------AFDLYSEMVSKGISPDVVTYNALIS-- 255
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
F + G + +A + M+ N P+ +N+L+ C+ + +A
Sbjct: 256 -------------GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302
Query: 413 NMYMEMVRYGFVSHMFSVLALL 434
N+ M++ G +F+ +L+
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLM 324
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E IQ D+ TY ++ C R+E + + KG D Y +I GFC++ +
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
+ + +M++ G +P+A TY +I +L K +A L +EM++
Sbjct: 511 SLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMIT 555
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 185/411 (45%), Gaps = 52/411 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y +I C + + + +LR + K + PD + Y +I G C ++ A++
Sbjct: 6 DKVGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I PD FTY++LI C +L +A LF +M S P TF L+ A C E
Sbjct: 66 SEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKE 125
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A ++ M+ +G+ P+ V TY++++ G C + V A GI M G
Sbjct: 126 GNVKEAKNVLAMMMKQGINPNAV--------TYSSLMDGYCLVNEVNNAKGIFSTMSLRG 177
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGLSDEDTYAS 274
++ + SY I+I+GFC+ + +A L EM RK++ D TY S
Sbjct: 178 VTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLI---------------PDVVTYNS 222
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD- 333
LIN C G++ L L DEM +G PD + S L++ L K + D LL + D
Sbjct: 223 LINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQV-DKAIALLTNLKDQ 281
Query: 334 ------YMYTSMPNYI-----------IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
Y YT + + + I++ L+ N + ++ F +GL +EA
Sbjct: 282 GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 341
Query: 377 ARAHDTMLEGNYKPDGAVYNLLI---FDHCRRLNVHKAYNMYMEMVRYGFV 424
M + + P+ Y ++I FD+ KA N+ EM+ G +
Sbjct: 342 LALLSKMKDNSCFPNALTYEIIIRSLFDNDEN---DKAENLLREMITRGLL 389
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I + TY+ ++ +CL+ V GI M+ +G++ + SY +I GFC + +
Sbjct: 141 QGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDE 200
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A EM + ++PD TY+SLI LC ++S A L EM PPD IT+++L+
Sbjct: 201 AMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLD 260
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + + +G+ P+ ++TY +I GLC GR+E+A I
Sbjct: 261 ALCKNHQVDKAIALLTNLKDQGIRPN--------MYTYTILIDGLCKGGRLEDAHNIFED 312
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G + +Y ++I GFC +A L +M + + +TY +++ L D D
Sbjct: 313 LLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFP-NALTYEIIIRSLFDND 371
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 140/321 (43%), Gaps = 62/321 (19%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I D+ TYN +I C++ +++ + M K ++P ++ ++ FC
Sbjct: 70 SKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVK 129
Query: 93 KAYEFKLEMDQKGILPDAFTYSSL-----------------------------------I 117
+A M ++GI P+A TYSSL I
Sbjct: 130 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 189
Query: 118 QALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
C + EA +LF+EM PD +T+ +L++ C G+ S A + +M +G
Sbjct: 190 NGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQP 249
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
PD + TY++++ LC +V++A+ +L + + G+ P+ +Y I+I G C+
Sbjct: 250 PDII--------TYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGG 301
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDD 293
L A+ + ++ L++G + +TY +I+ +C +G + L L
Sbjct: 302 RLEDAHNIFEDL---------------LVKGYNITVNTYTVMIHGFCNKGLFDEALALLS 346
Query: 294 EMSHKGSLPDSVIDSLLINGL 314
+M P+++ ++I L
Sbjct: 347 KMKDNSCFPNALTYEIIIRSL 367
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 151/350 (43%), Gaps = 45/350 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMH 165
D Y +LI LC A L + + L PD + + T++ C + + AF ++
Sbjct: 6 DKVGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+M K + PD +FTYNA+I G C +G++++A + M ++P ++ I
Sbjct: 66 SEMASKRIFPD--------VFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNI 117
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGE 284
++ FC+ +++A + M + QG++ + TY+SL++ YC E
Sbjct: 118 LVDAFCKEGNVKEAKNVLAMM---------------MKQGINPNAVTYSSLMDGYCLVNE 162
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ + MS +G + +++ING + K T + L + +P+ +
Sbjct: 163 VNNAKGIFSTMSLRGVTANVWSYNIMINGF---CKIKMTDEAMNLFEEMHCRKLIPDVVT 219
Query: 345 YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
Y++LI GL KS G ++ A + D M + PD Y+ L+ C+
Sbjct: 220 YNSLIN-----------GLCKS----GKISYALKLVDEMHDRGQPPDIITYSSLLDALCK 264
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
V KA + + G +M++ L+ L G + + ++ L
Sbjct: 265 NHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF Y +I+GLC +G + AL +LR + + PD V Y +I G C+++ + A
Sbjct: 2 GFHLDKVGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDA 61
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
++L EM K ++ D TY +LI+ +C G+L L ++M+ K
Sbjct: 62 FDLYSEMASKRIF--------------PDVFTYNALISGFCIVGKLKDATDLFNKMTSKN 107
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFK 358
P ++L++ K+ K+ K L +++ + PN + Y +L++ C NE
Sbjct: 108 INPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGIN---PNAVTYSSLMDGYCLVNEVN 164
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYK--------------------PDGAVYNLL 398
+ G+ + S+RG V +++ M+ G K PD YN L
Sbjct: 165 NAKGIFSTMSLRG-VTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSL 223
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
I C+ + A + EM G + + +LL AL
Sbjct: 224 INGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDAL 262
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 195/423 (46%), Gaps = 48/423 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TYN ++ C ++ + +L M GL P+ +Y ++ G+C + +A E
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVI 304
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
M KG+LPD +TY+++++ LC + ++ EA L +M S PD +T+ TL+ C
Sbjct: 305 ELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEH 364
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
AF + +M +GV + V T+N +I C G+++EA ++ M E G
Sbjct: 365 RGSDAAFKLVEEMKARGVKENGV--------THNIMIKWFCTEGKIDEASNVMVKMVESG 416
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
SPD +Y +I+G+C+ ++ +AY++ EM RK GL T+ T +L
Sbjct: 417 FSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK---GLKLDTF-----------TLNTL 462
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
++ C + +L TL + +G + D V LI G KD +A L + + M
Sbjct: 463 LHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGY-----FKDEQADRALKLWEEM 517
Query: 336 YTS--MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ + I Y+T+I + + G ++A + +LE PD +
Sbjct: 518 KETGIVATIITYNTII---------------RGLCLSGKTDQAVDKLNELLEKGLVPDES 562
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNT 453
N++I +C V KA+ + +MV + +F+ LL L GM E+ + NT
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGML-EKGLTLFNT 621
Query: 454 LRS 456
S
Sbjct: 622 WIS 624
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 34/317 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ ++++ T+N +IK C ++++ ++ M E G SPD +Y +I G+C
Sbjct: 379 ARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMA 438
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
+AY+ EM +KG+ D FT ++L+ +C +++L +AY L + D++T+ TL+
Sbjct: 439 EAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLI 498
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ + +A + +M TG + TYN II GLC G+ ++A+ L
Sbjct: 499 MGYFKDEQADRALKLWEEMKE--------TGIVATIITYNTIIRGLCLSGKTDQAVDKLN 550
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ E GL PD + I+I G+C + KA++ +M + D T L++GL E
Sbjct: 551 ELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL-KPDIFTCNILLRGLCRE 609
Query: 270 D----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
TY +I+++C + L L EM K PD
Sbjct: 610 GMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTY 669
Query: 308 SLLINGLDKKARTKDTK 324
+ ++ GL K RT++ +
Sbjct: 670 NAIVTGLTKAGRTEEAE 686
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 141/322 (43%), Gaps = 56/322 (17%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-GFSPALFTYNAIIHGLCFL 198
P+ +T TL++A ++ H + + V D V G P + T+N +IHG C
Sbjct: 171 PNLLTCNTLLNA------LVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSD 224
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
EEAL ++ M E G PD V+Y V++ C+ +L + +L ++M GL
Sbjct: 225 NNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNS---GL---- 277
Query: 259 YAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL---- 314
+ +TY L++ YC L + + + M+ KG LPD + ++ GL
Sbjct: 278 -------FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 315 --DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC-----SNNEFKSVVG----- 362
D+ R +D L+ P+ + Y+TLI+ C S+ FK V
Sbjct: 331 KIDEAVRLRDKMESFKLV---------PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381
Query: 363 ----------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
++K F G ++EA+ M+E + PD YN +I +C+ + +AY
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAY 441
Query: 413 NMYMEMVRYGFVSHMFSVLALL 434
M EM R G F++ LL
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLL 463
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 33/317 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D T N ++ CL ++++ + ++G D ++Y +I G+ + +
Sbjct: 450 KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A + EM + GI+ TY+++I+ LC + +A E+L PD+ T ++H
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
C EG KAF H++M+ + PD T G
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM 629
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
TYN II C R+E+A ++ M L PD +Y +++G + +A +L
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLA 689
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
++ K + T L G SD Y+ I++ C QG+ + L + KG +
Sbjct: 690 LKFAEKGQQVKTQDTSPEL--GTSDM-MYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLN 746
Query: 304 SVIDSLLINGLDKKART 320
L++GL K+ ++
Sbjct: 747 KYTYIKLMDGLLKRRKS 763
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARN---SESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
D FT + R + R G++ + N S+ D TYN II C +R+E +
Sbjct: 595 DIFTCNI-LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDL 653
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG-------ILPDAFT--- 112
+ M K L PD +Y ++TG +A + L+ +KG P+ T
Sbjct: 654 MTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDM 713
Query: 113 -YSSLIQALCSKRRLSEAYHLFQE 135
YS I +LC++ + +A LFQ+
Sbjct: 714 MYSEQISSLCTQGKYKDAMKLFQQ 737
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 219/497 (44%), Gaps = 105/497 (21%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + D Y ++ +C M R+E V I M GL + + +I G+C +
Sbjct: 326 ELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCE 385
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + M + PD ++Y++L+ C + ++S+A+ L +EML P +T+ T++
Sbjct: 386 AERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIK 445
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
G + A H+ H M+ +GV P+ ++ GF+
Sbjct: 446 GLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTK 505
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ +N +I GLC +G++ EA + M E+GLSPD ++Y + G+C+N +++A+++K
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIK 565
Query: 244 VEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCA 281
M+R+ + E+ Y L+ GL + TY +LI+ +C
Sbjct: 566 GVMERQAMSASIEM-YNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCD 624
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLING-------------LDK-----------K 317
+ +L K L EM +G P+ V+ S +++ LDK K
Sbjct: 625 EQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNK 684
Query: 318 ARTKDTKAHLLL---IIADYM-----YTSMPNYIIYDTLIEN-CSN---NEFKSVVG--- 362
K K L L IAD + S+ N I+Y+ I+ C + +E +SV+
Sbjct: 685 CSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLM 744
Query: 363 -------------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
L+ + S+ G V+EA + D MLE P+ +YN LI C+ N+
Sbjct: 745 SRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNID 804
Query: 410 KAYNMYMEMVRYGFVSH 426
+A ++ ++ + G V +
Sbjct: 805 RAQRLFYKLYQKGLVPN 821
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 206/474 (43%), Gaps = 76/474 (16%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+ + ++ HC + RV+ + +L M ++GL P+ ++Y ++ G+ R +
Sbjct: 222 IVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYV-GRGDFEGV 280
Query: 96 EFKLE-MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTLMH 150
E L M ++G+ + T + L++ C K ++ EA L +E+ L D+ + L+
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G A + +M+ G+ + V N +I G C LG+V EA + G
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMV--------ICNTLIKGYCKLGQVCEAERVFVG 392
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + L PD SY ++ G+C+ ++ KA+ L EM + VTY +++GL D
Sbjct: 393 MVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITP-TVVTYNTVIKGLVDVG 451
Query: 271 TY----------------------ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
+Y ++++ + G+ + + L E+ +G +V +
Sbjct: 452 SYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFN 511
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYM--YTSMPNYIIYDTLIEN-CSNNEFKSVVGLVK 365
+I+GL K + + A + D M P+ I Y TL + C N + +
Sbjct: 512 TMISGLCKMGKLMEAGA-----VFDRMKELGLSPDEITYRTLSDGYCKNGNVQ------E 560
Query: 366 SFSMRGLVNEAARA-----HDTMLEGNYK--------------------PDGAVYNLLIF 400
+F ++G++ A + ++++++G +K P+ Y LI
Sbjct: 561 AFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLIS 620
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
C + KA+++Y EM+ GF ++ ++++L +E + ++ L
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKML 674
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 46/253 (18%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF------ 85
+ + ++ TY +I C Q+++K + M E+G +P+ + +++
Sbjct: 604 QTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRI 663
Query: 86 -----------------CNNRCPGKAYEFKLEMDQKGI------------LPDAFTYSSL 116
+N+C K + L ++ + I L + Y+
Sbjct: 664 SEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIA 723
Query: 117 IQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
I LC +L EA + ++S PD+ T+ TL+HAC + G +AF + +M+ KG+
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+P+ YNA+I+GLC LG ++ A + + + GL P+AV+Y I+I +C+
Sbjct: 784 IPNITI--------YNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRI 835
Query: 234 RELRKAYELKVEM 246
+L KA L+ +M
Sbjct: 836 GDLDKASRLREKM 848
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 29/297 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+++ + YN +I ++++ +L M +GLSP+ ++Y +I+G+C+ + K
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTL-MHAC 152
A+ EM ++G P+ S ++ +L R+SEA + +ML F L +H
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLD------FDILAVHNK 684
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + Q I + + YN I GLC G+++EA +L +
Sbjct: 685 CSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLM 744
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT- 271
G PD +Y +I + + +A++L+ EM L +GL T
Sbjct: 745 SRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM---------------LEKGLIPNITI 789
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL------INGLDKKARTKD 322
Y +LIN C G + + L ++ KG +P++V ++L I LDK +R ++
Sbjct: 790 YNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLRE 846
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 96/387 (24%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+++ AE+G++ AL Y F EM + G +P + S L+ L
Sbjct: 162 LMKAFAERGMTKHAL------------------YVFD-EMSRIGRVPGLRSCSFLLGKLV 202
Query: 122 SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
K A +F +++ PD + +++A C G A + +M+ +G+ P+ V
Sbjct: 203 QKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVV 262
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
T YN +++G G E +LR M E G+S + V+ +++ G+C+ ++ +
Sbjct: 263 T--------YNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDE 314
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A +L E++ DE+ + DE Y L++ YC G + + + DEM
Sbjct: 315 AEKLLREVEE------DELL-------VVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRV 361
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
G N +I +TLI
Sbjct: 362 GL--------------------------------------KVNMVICNTLI--------- 374
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
K + G V EA R M++ N KPD YN L+ +CR V KA+ + EM
Sbjct: 375 ------KGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEM 428
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNE 445
+ G + + ++ L D G Y++
Sbjct: 429 LGDGITPTVVTYNTVIKGLVDVGSYDD 455
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 181/411 (44%), Gaps = 52/411 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +L+ + K ++ D + Y +I C ++ AY+
Sbjct: 163 DQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLY 222
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I PD T++SLI C +L EA+ LF EM+ PD TF+ L+ A C +
Sbjct: 223 SEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKD 282
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G ++A +M M+ +GV+PD V TY++++ G C + V +A + M +G
Sbjct: 283 GNITRAKNMLAVMMKQGVIPDVV--------TYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--------- 266
++P A SY I+I+G + + + +A L EM K + D VTY L+ GL
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI-APDTVTYNSLIDGLCKLGRISYA 393
Query: 267 -------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+D TY SLI+ C + K + L ++ +G P ++LI+G
Sbjct: 394 WQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L K R K+ + + D LI+ S N + + ++ GL
Sbjct: 454 LCKGGRLKNAQD-----------------VFQDLLIKGYSVNAWTYNI-MINGLCKEGLF 495
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
NEA M PD Y +I R+ KA + EM+ G +
Sbjct: 496 NEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 194/409 (47%), Gaps = 47/409 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I CL ++++ + + G D +SYR +I G C A + ++
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI 190
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ K + D Y+ +I +LC + +S+AY L+ EM++ PD +TF +L+ C+ G+
Sbjct: 191 EGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQL 250
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+AF + H+M+ K + PD ++T++ ++ LC G + A +L M + G+ P
Sbjct: 251 KEAFGLFHEMVLKNINPD--------VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP 302
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
D V+Y ++ G+C E+ KA + M R L +A+ +Y +IN
Sbjct: 303 DVVTYSSLMDGYCLVNEVNKAKHVFSTMSR-----LGVAPHAH---------SYNIMING 348
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
+ + L+L EM KG PD+V + LI+GL K R ++ ++ +
Sbjct: 349 LGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRI----SYAWQLVDEMHNNG 404
Query: 339 MPNYII-YDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
+P I+ Y++LI+ C N+ + LVK +G+ +P YN
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI----------------QPSMYTYN 448
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+LI C+ + A +++ +++ G+ + ++ ++ L G++NE
Sbjct: 449 ILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNE 497
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 12/245 (4%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A + + D+ TY+ ++ +CL+ V K + M+ G++P A SY +I G
Sbjct: 293 AVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKI 352
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM KGI PD TY+SLI LC R+S A+ L EM + P D +T+
Sbjct: 353 KMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTY 412
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ C KA + ++ +G+ P+++TYN +I GLC GR++ A
Sbjct: 413 NSLIDVLCKNHHIDKAIALVKKIKDQGI--------QPSMYTYNILIDGLCKGGRLKNAQ 464
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+ + + G S +A +Y I+I+G C+ +A L +M+ + D VTY +++
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIP-DAVTYETIIRA 523
Query: 266 LSDED 270
L +D
Sbjct: 524 LFRKD 528
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 158/374 (42%), Gaps = 48/374 (12%)
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
NN A +++ KGI P T++ L+ C ++ A+ +F ++L P I
Sbjct: 71 NNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTI 130
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TF TL++ CL G+ +A H H +I GF +Y +I+GLC +G
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVI--------ALGFHLDQVSYRTLINGLCKIGETRA 182
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
AL +L+ + ++ D V Y I+I+ C+++ + AY+L EM K +
Sbjct: 183 ALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS----------- 231
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
D T+ SLI +C G+L + L EM K PD S+L++ L K
Sbjct: 232 ---PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA 288
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG----------- 371
K L +++ + +P+ + Y +L++ C NE + + S G
Sbjct: 289 KNMLAVMMKQGV---IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIM 345
Query: 372 --------LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+V+EA M PD YN LI C+ + A+ + EM G
Sbjct: 346 INGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405
Query: 424 VSHMFSVLALLTAL 437
+ + + +L+ L
Sbjct: 406 PADILTYNSLIDVL 419
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 40/324 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I D+ T+N +I C++ ++++ G+ M K ++PD ++ ++ C +
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A M ++G++PD TYSSL+ C +++A H+F M P ++ ++
Sbjct: 287 RAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ +A + +M KG+ PD V TYN++I GLC LGR+ A ++
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIAPDTV--------TYNSLIDGLCKLGRISYAWQLVD 398
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY-------- 261
M G+ D ++Y +I C+N + KA L ++ + G+ Y Y
Sbjct: 399 EMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ---GIQPSMYTYNILIDGLC 455
Query: 262 ---------------LMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
L++G S + TY +IN C +G + L +M + G +PD+V
Sbjct: 456 KGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAV 515
Query: 306 IDSLLINGLDKKARTKDTKAHLLL 329
+I L +K ++ KA LL
Sbjct: 516 TYETIIRALFRK--DENEKAEKLL 537
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 42/309 (13%)
Query: 128 EAYHLFQEMLSPPDDITFTTLMHACCL--EGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
++H M P + F ++ + ++ A + HQ+ KG+ +P +
Sbjct: 43 SSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGI--------TPTI 94
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
T+N +++ C LG + A I + ++G P +++ +I+G C N +L++A
Sbjct: 95 VTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFH-- 152
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D + G D+ +Y +LIN C GE L + ++ K D V
Sbjct: 153 -DHVIALGFH-----------LDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVV 200
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
+ +++IN L K D Y +Y +I + + + L+
Sbjct: 201 MYNIIINSLCKDKAVSDA------------------YQLYSEMITKRISPDVVTFNSLIL 242
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
F + G + EA M+ N PD +++L+ C+ N+ +A NM M++ G +
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP 302
Query: 426 HMFSVLALL 434
+ + +L+
Sbjct: 303 DVVTYSSLM 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ + TYN +I C R++ + + + KG S +A +Y +I G C +
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNE 497
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M+ GI+PDA TY ++I+AL K +A L +EM+
Sbjct: 498 AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMI 541
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 175/404 (43%), Gaps = 42/404 (10%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + + +LR K + PD + Y +I G C ++ A++
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
E K I PD FTY++LI C +L +A LF +M S PD TF+ L+ C +
Sbjct: 357 SEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKD 416
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A ++ M+ + + PD V TY++++ G C + V +A I M G
Sbjct: 417 GNIKEAKNVLAMMMKQSIKPDVV--------TYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++ + SY I+I+GFC+ + + +A +L EM K Q D TY+SL
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK--------------QIFPDVITYSSL 514
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ C G + L L DEM ++G PD + + +++ L KK L + +
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574
Query: 336 YTSMPNYII-----------------YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
M Y I ++ L+ N + + +++ F +GL +EA
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
M E PD Y ++I + A + EM+ G
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 184/414 (44%), Gaps = 47/414 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T IK CL ++ + + + G D +SY +I G C A E
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
D K + PD Y+++I +C + +++A+ L+ E +S PD T+ L+ C
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFC 379
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+ A + ++M K ++PD ++T++ ++ G C G ++EA +L M +
Sbjct: 380 IVGKLKDAIDLFNKMTSKNIIPD--------VYTFSILVDGFCKDGNIKEAKNVLAMMMK 431
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+ PD V+Y ++ G+C E+ KA + M + V ++ +Y
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV--------------TANVQSYN 477
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+IN +C + + + L EM HK PD + S LI+GL K R ++ L ++ +
Sbjct: 478 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI----SYALELVDE 533
Query: 334 YMYT-SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
Y P+ I Y+++++ C + + L+ +G+ +PD
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI----------------RPD 577
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
Y +L+ C+ + A ++ +++ G+ +++ ++ D G+++E
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+SI+ D+ TY+ ++ +CL+ V K I M+ +G++ + SY +I GFC + +
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A + EM K I PD TYSSLI LC R+S A L EM PD IT+ +++
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + ++ +G+ PD + TY ++ GLC G++E+A +
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPD--------MNTYTILVKGLCQSGKLEDARKVFED 603
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G + D +Y ++I GFC +A L +M+ D TY ++ L ++D
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP-DAKTYEIIILSLFEKD 662
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 62/328 (18%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
+ + S+ I D+ TYN +I C++ +++ + + M K + PD ++ ++ GFC +
Sbjct: 357 SEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKD 416
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSL-------------------------------- 116
+A M ++ I PD TYSSL
Sbjct: 417 GNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSY 476
Query: 117 ---IQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
I C + + EA LF+EM PD IT+++L+ C G S A + +M +
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+G PD + TYN+I+ LC V++A+ +L + G+ PD +Y I++ G
Sbjct: 537 RGQQPDII--------TYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVL 289
CQ+ +L A RKV L L++G + D Y +I +C +G + L
Sbjct: 589 CQSGKLEDA--------RKVFEDL-------LVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKK 317
L +M G +PD+ ++I L +K
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEK 661
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 138/344 (40%), Gaps = 65/344 (18%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G+ P T I G C G++ +AL + MG D VSY +I+G C+ E + A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLIN 277
EL D K+V D V Y ++ G+ D TY +LI+
Sbjct: 318 LELLRRNDGKLVQP-DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALIS 376
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
+C G+L + L ++M+ K +PD S+L++G K K+ K L +++ +
Sbjct: 377 GFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ---S 433
Query: 338 SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG-------------------LVNEAA 377
P+ + Y +L++ C NE + + S RG +V+EA
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM---------VRYGFV---- 424
+ M PD Y+ LI C+ + A + EM + Y +
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Query: 425 ---SHMFSVLALLTALRDHGM---YNERSWVIQNTLRSCNLNDS 462
H+ + LLT L+ G+ N + +++ +S L D+
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA 597
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY ++K C ++E + + KG + D +Y +I GFC+ +
Sbjct: 572 QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M++ G +PDA TY +I +L K A L +EM+
Sbjct: 632 ALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 190/417 (45%), Gaps = 44/417 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL-SPDALSYRYVITGFCNNRCP 91
++ Q +Y +I C + + + + +LR + + L PD + Y +I C ++
Sbjct: 155 AQGFQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHV 214
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
A++ EM +K I PD FTY+SLI C +L E + L EM+ PD TF TL
Sbjct: 215 NDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTL 274
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ A EG+ +A + M+ +GV P+ V TY+ ++ G C + V +A I
Sbjct: 275 VDALFKEGKVKEAKCLIAVMMKEGVEPNIV--------TYSVLMDGYCLVNEVNKAKDIF 326
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M + G++PD SY I+I+G C+ + L +A L EM LD +
Sbjct: 327 NSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEM-HSTNMTLDVI----------- 374
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
TY+SLIN C G L L DEM +G PD + + L++ L K +T D LL
Sbjct: 375 --TYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQT-DKAIALL 431
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+ D + + Y+ LI+ GL K G +++A + +L +Y
Sbjct: 432 SKMKDQGIQA--DIFTYNILID-----------GLCKD----GRLDDAQKIFRDLLIKSY 474
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
D YN++I C+ + +A + +M G + + ++ AL G+ ++
Sbjct: 475 NVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIIIRALFGKGVNDK 531
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E ++ ++ TY+ ++ +CL+ V K I M ++G++PD SY +I G C
Sbjct: 292 AVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKM 351
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+ +A EM + D TYSSLI LC RL A+ LF EML PPD IT+
Sbjct: 352 KMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITY 411
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ A C + KA + +M +G+ D +FTYN +I GLC GR+++A
Sbjct: 412 NSLLDALCKSHQTDKAIALLSKMKDQGIQAD--------IFTYNILIDGLCKDGRLDDAQ 463
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
I R + + D V+Y ++I+G C+ L +A L +M+ K D +TY +++
Sbjct: 464 KIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIP-DAITYEIIIRA 522
Query: 266 LSDE---DTYASLINAYCAQGEL 285
L + D L+ A+G L
Sbjct: 523 LFGKGVNDKAEKLLREMIARGLL 545
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 156/378 (41%), Gaps = 60/378 (15%)
Query: 108 PDAFTYSSLIQALCS--KRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAF 162
P ++ ++ +L K S LF++M P +T + L++ + AF
Sbjct: 53 PPIIEFNQILTSLVKIDKNNFSTVISLFRQMEFQRIHPSIVTLSILINCYSHLRQMKFAF 112
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ +++ G PD + +N +I GLC V+EAL + G VS
Sbjct: 113 SLFGKILKMGCHPDVII--------FNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVS 164
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---------------- 266
Y +I+G C+ + + A +L ++R++++ D V Y+ ++ L
Sbjct: 165 YGTLINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEM 224
Query: 267 ------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
D TY SLI+ +C G+L +V L +EM K PD + L++ L K+ +
Sbjct: 225 IRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKV 284
Query: 321 KDTKAHLLLIIADYMYTSM-PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG------- 371
K+ K +IA M + PN + Y L++ C NE + S RG
Sbjct: 285 KEAKC----LIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQS 340
Query: 372 ------------LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+++EA + M N D Y+ LI C+ + A+ ++ EM+
Sbjct: 341 YTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEML 400
Query: 420 RYGFVSHMFSVLALLTAL 437
G + + +LL AL
Sbjct: 401 DRGQPPDVITYNSLLDAL 418
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 199/437 (45%), Gaps = 56/437 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+ T+N +I +C M + ++ + + G PD +++ +I G C N +A
Sbjct: 99 ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G D F+Y +LI LC A + +++ L + + + T++ +
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C A+ ++ QMI K + PD V T++A+I+G C +G++EEA G+ R M
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVV--------TFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------ 266
++PD ++ I++ C+ L+ A + V M ++ V + VTY+ LM G
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP-NVVTYSSLMDGYCLVNQV 329
Query: 267 ----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+ +Y ++IN +C + + L+L ++M KG PD V + L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFS 368
I+GL K R ++ ++ + P N Y+ LI+ C N+ + LVK
Sbjct: 390 IDGLCKSGRI----SYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMF 428
+G+ +PD +N+LI+ C+ + A +++ +++ G+ + +
Sbjct: 446 DQGI----------------QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAW 489
Query: 429 SVLALLTALRDHGMYNE 445
+ ++ L G+++E
Sbjct: 490 TYNIMVNGLCKEGLFDE 506
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 71/470 (15%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+F + + HM A + D T+N +IK CL +V++ + +
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G D SY +I G C A + ++D K + + Y+++I +LC + +
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---- 179
+AY L+ +M++ PD +TF+ L++ C+ G+ +AF + +M+ K + PD+ T
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNIL 284
Query: 180 -----------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
G P + TY++++ G C + +V +A +L + +MG
Sbjct: 285 VDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------ 270
+P+A SY +I+GFC+ + + +A L +M K + D+VTY L+ GL
Sbjct: 345 APNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI-APDKVTYNSLIDGLCKSGRISYAW 403
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
TY LI+A C + + + L ++ +G PD ++LI GL
Sbjct: 404 ELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGL 463
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
K R K+ + + D L + S N + + +V GL +
Sbjct: 464 CKVGRLKNAQD-----------------VFQDLLSKGYSVNAWTYNI-MVNGLCKEGLFD 505
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
EA M + PD Y LI + KA + EM+ G +
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARGLL 555
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 168/378 (44%), Gaps = 50/378 (13%)
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
NN P A ++ GI PD FT++ LI C ++ A+ + ++L PD I
Sbjct: 81 NNHYP-TAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTI 139
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TF TL+ CL G+ +A H H ++ GF F+Y +I+GLC +G
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVL--------ALGFHLDQFSYGTLINGLCKIGETRT 191
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
AL +LR + + + V Y +I C+++ + AYEL +M K +
Sbjct: 192 ALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS----------- 240
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
D T+++LI +C G+L + L EM K PD ++L++ L K+ K
Sbjct: 241 ---PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGA 297
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG----------- 371
K L++++ + + MPN + Y +L++ C N+ ++ + S G
Sbjct: 298 KNMLVVMMKEGV---MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTM 354
Query: 372 --------LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+V+EA + M PD YN LI C+ + A+ + EM G
Sbjct: 355 INGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ 414
Query: 424 VSHMFSVLALLTAL-RDH 440
+++F+ L+ AL ++H
Sbjct: 415 PANIFTYNCLIDALCKNH 432
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 199/437 (45%), Gaps = 56/437 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+ T+N +I +C M + ++ + + G PD +++ +I G C N +A
Sbjct: 99 ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G D F+Y +LI LC A + +++ L + + + T++ +
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C A+ ++ QMI K + PD V T++A+I+G C +G++EEA G+ R M
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVV--------TFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------ 266
++PD ++ I++ C+ L+ A + V M ++ V + VTY+ LM G
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP-NVVTYSSLMDGYCLVNQV 329
Query: 267 ----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+ +Y ++IN +C + + L+L ++M KG PD V + L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFS 368
I+GL K R ++ ++ + P N Y+ LI+ C N+ + LVK
Sbjct: 390 IDGLCKSGRI----SYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMF 428
+G+ +PD +N+LI+ C+ + A +++ +++ G+ + +
Sbjct: 446 DQGI----------------QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAW 489
Query: 429 SVLALLTALRDHGMYNE 445
+ ++ L G+++E
Sbjct: 490 TYNIMVNGLCKEGLFDE 506
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 71/470 (15%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+F + + HM A + D T+N +IK CL +V++ + +
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
G D SY +I G C A + ++D K + + Y+++I +LC + +
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---- 179
+AY L+ +M++ PD +TF+ L++ C+ G+ +AF + +M+ K + PD+ T
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNIL 284
Query: 180 -----------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
G P + TY++++ G C + +V +A +L + +MG
Sbjct: 285 VDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED------ 270
+P+A SY +I+GFC+ + + +A L +M K + D+VTY L+ GL
Sbjct: 345 APNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI-APDKVTYNSLIDGLCKSGRISYAW 403
Query: 271 ----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
TY LI+A C + + + L ++ +G PD ++LI GL
Sbjct: 404 ELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGL 463
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
K R K+ + + D L + S N + + +V GL +
Sbjct: 464 CKVGRLKNAQD-----------------VFQDLLSKGYSVNAWTYNI-MVNGLCKEGLFD 505
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
EA M + PD Y LI + KA + EM+ G +
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARGLL 555
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 168/378 (44%), Gaps = 50/378 (13%)
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
NN P A ++ GI PD FT++ LI C ++ A+ + ++L PD I
Sbjct: 81 NNHYP-TAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTI 139
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TF TL+ CL G+ +A H H ++ GF F+Y +I+GLC +G
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVL--------ALGFHLDQFSYGTLINGLCKIGETRT 191
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
AL +LR + + + V Y +I C+++ + AYEL +M K +
Sbjct: 192 ALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS----------- 240
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
D T+++LI +C G+L + L EM K PD ++L++ L K+ K
Sbjct: 241 ---PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGA 297
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG----------- 371
K L++++ + + MPN + Y +L++ C N+ ++ + S G
Sbjct: 298 KNMLVVMMKEGV---MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTM 354
Query: 372 --------LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+V+EA + M PD YN LI C+ + A+ + EM G
Sbjct: 355 INGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ 414
Query: 424 VSHMFSVLALLTAL-RDH 440
+++F+ L+ AL ++H
Sbjct: 415 PANIFTYNCLIDALCKNH 432
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 189/455 (41%), Gaps = 69/455 (15%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ TY IK C R + +LR M G +A++Y V+TGF +
Sbjct: 140 KKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDR 199
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E EM + + PD T++ L+ ALC K + E+ LF ++L P+ TF +
Sbjct: 200 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ 259
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
C EG +A + + +G+ PD VT GF P
Sbjct: 260 GLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEP 319
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
FTYN+II G C G V +A IL+ G PD +Y +++GFCQ+ + +A +
Sbjct: 320 NDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA--MA 377
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
V D GL + ++ Y +LI C QG + L L +EM+ KG PD
Sbjct: 378 VFKD-----GLGKGLRPSII-------VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 425
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLIEN-CSNNEFKSVV 361
+L+INGL K D HL I D + +P+ Y+TL++ C + S +
Sbjct: 426 IWTYNLIINGLCKMGCLSDAN-HL---IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 481
Query: 362 GLVKSFSMRGLV-------------------NEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
LV +G+ E M E P+ YN +I
Sbjct: 482 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 541
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
C V++A ++ EM G + S L+T
Sbjct: 542 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGF 576
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 194/449 (43%), Gaps = 59/449 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ ++ + YN +IK C + + ++ MAEKG PD +Y +I G C C
Sbjct: 384 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 443
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
A + KG +PD FTY++L+ C + +L A L M S PD IT+ TL+
Sbjct: 444 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 503
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C + + + M KG P+ + TYN II LC +V EA+ +L
Sbjct: 504 NGLCKTAKSEEVMEIFKAMTEKGCAPNII--------TYNTIIESLCNSKKVNEAVDLLG 555
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M GL+PD VS+ +I+GFC+ +L AY L M+++ + + T
Sbjct: 556 EMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ--YDVSHTT----------- 602
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +I+A+ Q + L L EM G PD+ +LI+G K LL
Sbjct: 603 ATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLE 662
Query: 330 IIADYMYTSMPNY-IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
I S+ + + + L C ++ + VG++ + +V + +T+ E +
Sbjct: 663 NIEKGFIPSLTTFGRVLNCL---CVEHKVQEAVGIIHLMVQKDIVPDTV---NTIFEADK 716
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNER-- 446
K A ++ +H + H Y+ Y L +RD + ++
Sbjct: 717 KVVAAPK--IVVEHLLKKG-HITYHAYE---------------FLYDGVRDKKILKKKHP 758
Query: 447 SWVIQNTLRSC-----NLNDSELHKVLNE 470
+W N+LR C + ELH++LN+
Sbjct: 759 NW---NSLRRCLVLLVDTYSGELHELLNK 784
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
A + ++ TYN II+ C ++V + V +L M KGL+PD +S+ +ITGFC
Sbjct: 521 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG 580
Query: 90 CPGKAYE-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
AY F+ Q + TY+ +I A + + A LF EM PD+ T+
Sbjct: 581 DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTY 640
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
L+ C G ++ + K +L + GF P+L T+ +++ LC +V+EA+
Sbjct: 641 RVLIDGFCKTGNVNQGY--------KFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 692
Query: 206 GILRGMPEMGLSPDAVSYI 224
GI+ M + + PD V+ I
Sbjct: 693 GIIHLMVQKDIVPDTVNTI 711
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 165/408 (40%), Gaps = 88/408 (21%)
Query: 91 PGKAYE-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLM 149
P KA E F +++G FTY S++Q L + +E +L EM S D+
Sbjct: 20 PLKALEIFNSSKNEQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTL----- 74
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS--------PALFTYNAI---------- 191
LEG + +A + + KG + + V F P++++YNAI
Sbjct: 75 ----LEGVYVEAMRFYGR---KGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYF 127
Query: 192 -------------------------IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
I C GR AL +LR MP +G +AV+Y V
Sbjct: 128 NQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTV 187
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
++GF + + +A EL DE+ L D T+ L++A C +G +
Sbjct: 188 VTGFYEFGDNDRAREL-----------FDEMLECCL---CPDVTTFNKLVHALCKKGFVL 233
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYD 346
+ L D++ +G P+ ++ I GL K+ + D LL ++ P+ + Y+
Sbjct: 234 ESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG-SLDRAVRLLGCVSREGLR--PDVVTYN 290
Query: 347 TLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
T+I GL + + V EA M+ G ++P+ YN +I +C++
Sbjct: 291 TVI-----------CGLCR----KSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 335
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
V A + + V GF F+ +L+ G ++ V ++ L
Sbjct: 336 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 383
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F + ATYN II ++ + + M + G PD +YR +I GFC
Sbjct: 589 FRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFC 648
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDI 143
+ Y+F LE +KG +P T+ ++ LC + ++ EA + M+ PD
Sbjct: 649 KTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD-- 706
Query: 144 TFTTLMHA 151
T T+ A
Sbjct: 707 TVNTIFEA 714
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 185/412 (44%), Gaps = 54/412 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K + P + Y +I G C ++ A++
Sbjct: 6 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I PD FTY++LI C +L +A LF +M PD TF L+ A C E
Sbjct: 66 SEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKE 125
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A ++ M+ +G+ P+ V TY+A++ G C + +V +A I M + G
Sbjct: 126 GKMKEAKNVLAMMMKQGMKPNVV--------TYSALMDGYCLVKKVNKAKSIFNTMAQGG 177
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGL-------- 266
++PD SY I+I+G C+ + +A L EM RK++ D VTY L+ GL
Sbjct: 178 VNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIP--DVVTYNSLIDGLCKSGKISY 235
Query: 267 --------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
D TY+S+++A C ++ K + L + +G P+ ++LI+
Sbjct: 236 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILID 295
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
GL K R +D + I++ L+ N + ++ F +GL
Sbjct: 296 GLCKGGRLEDA------------------HNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 337
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+EA M + + P+ Y ++I + KA + EM+ G +
Sbjct: 338 FDEALALLSKMKDNSCFPNALTYEIIIRSLFDKDENDKAEKLLREMITRGLL 389
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 26/295 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I D+ T+N ++ C ++++ +L M ++G+ P+ ++Y ++ G+C + K
Sbjct: 106 ENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNK 165
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q G+ PD +YS LI LC + EA +LF+EM PD +T+ +L+
Sbjct: 166 AKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLID 225
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G+ S A + +M +GV PD + TY++I+ LC +V++A+ +L
Sbjct: 226 GLCKSGKISYALKLVDEMHDRGVPPDII--------TYSSILDALCKNHQVDKAIALLTN 277
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ + G+ P+ +Y I+I G C+ L A+ + ++ +V G + +
Sbjct: 278 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL---LVKGYNITV-----------N 323
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL-DKKARTKDTK 324
TY +I+ +C +G + L L +M P+++ ++I L DK K K
Sbjct: 324 TYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDKDENDKAEK 378
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 160/350 (45%), Gaps = 45/350 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMH 165
D +Y +LI LC A L + + L P + + T++ C + + AF ++
Sbjct: 6 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+M+ K + PD +FTYNA+I G C +G++++A+G+ M ++PD ++ I
Sbjct: 66 SEMVSKRISPD--------VFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNI 117
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGE 284
++ FC+ ++++A + M + QG+ + TY++L++ YC +
Sbjct: 118 LVDAFCKEGKMKEAKNVLAMM---------------MKQGMKPNVVTYSALMDGYCLVKK 162
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ K ++ + M+ G PD S+LINGL + K T + L + +P+ +
Sbjct: 163 VNKAKSIFNTMAQGGVNPDIHSYSILINGL---CKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 345 YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
Y++LI+ GL KS G ++ A + D M + PD Y+ ++ C+
Sbjct: 220 YNSLID-----------GLCKS----GKISYALKLVDEMHDRGVPPDIITYSSILDALCK 264
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
V KA + + G +M++ L+ L G + + ++ L
Sbjct: 265 NHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 314
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF +Y +I+GLC +G AL +LR + + P V Y +I G C+++ + A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
++L EM K + D TY +LI+ +C G+L + L ++M+ +
Sbjct: 62 FDLYSEMVSKRIS--------------PDVFTYNALISGFCIVGKLKDAIGLFNKMTLEN 107
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
PD ++L++ K+ + K+ K L +++ M PN + Y L++
Sbjct: 108 INPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMK---PNVVTYSALMD--------- 155
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ + VN+A +TM +G PD Y++LI C+ +A N++ EM
Sbjct: 156 ------GYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEM 208
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+ D+ TY+ I+ C +V+K + +L + ++G+ P+ +Y +I G C A
Sbjct: 247 GVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDA 306
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+ ++ KG TY+ +I C+K EA L +M P+ +T+ ++ +
Sbjct: 307 HNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRS 366
Query: 152 CCLEGEFSKAFHMHHQMIHKGVL 174
+ E KA + +MI +G+L
Sbjct: 367 LFDKDENDKAEKLLREMITRGLL 389
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 201/438 (45%), Gaps = 49/438 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T+ +IK CL + + + + G D +SY +I G C A E
Sbjct: 81 EPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETRAALE 140
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+D K + DA YSS+I ++C + +++A+ L+ EM + P+ +T++ L+ C
Sbjct: 141 LLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFC 200
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+ A + ++MI + + +P ++T++ ++ G C GRV+EA +L M +
Sbjct: 201 IVGKLKDAIDLFNKMILENI--------NPNVYTFSILVDGFCKEGRVKEAKNVLAMMMK 252
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ PD V+Y ++ G+C E+ KA + M + V ++ +Y+
Sbjct: 253 QGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVT--------------ANVQSYS 298
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+IN +C + + + L EM HK PD + S LI+GL K R L + D
Sbjct: 299 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRIS-----YALELVD 353
Query: 334 YMYT--SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
M+ P+ I Y+++++ C + + L+ +G+ +P
Sbjct: 354 EMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGI----------------RP 397
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
D Y +L+ CR + A ++ +++ G+ +++ ++ D G+++E ++
Sbjct: 398 DMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL 457
Query: 451 QNTLRSCNLNDSELHKVL 468
+ + D++ ++++
Sbjct: 458 SKMEENGCIPDAKTYEII 475
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 177/406 (43%), Gaps = 42/406 (10%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K + DA+ Y +I C ++ A++
Sbjct: 118 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLY 177
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I P+ TYS+LI C +L +A LF +M+ P+ TF+ L+ C E
Sbjct: 178 SEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKE 237
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A ++ M+ +G+ PD V TY++++ G C + V +A I M G
Sbjct: 238 GRVKEAKNVLAMMMKQGIKPDVV--------TYSSLMDGYCLVNEVNKAESIFNTMSHRG 289
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++ + SY I+I+GFC+ + + +A +L EM K ++ D TY++L
Sbjct: 290 VTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIF--------------PDVITYSAL 335
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ C G + L L DEM +G PD + + +++ L KK A L + +
Sbjct: 336 IDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGI 395
Query: 336 YTSMPNYII-----------------YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
M Y I ++ L+ N + + +++ F +GL +EA
Sbjct: 396 RPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 455
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
M E PD Y ++I + A + EM+ G +
Sbjct: 456 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 501
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I ++ T++ ++ C RV++ +L M ++G+ PD ++Y ++ G+C K
Sbjct: 218 ENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNK 277
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M +G+ + +YS +I C + + EA LF+EM PD IT++ L+
Sbjct: 278 AESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALID 337
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G S A + +M +G PD + TYN+I+ LC V++A+ +L
Sbjct: 338 GLCKSGRISYALELVDEMHDRGQQPDII--------TYNSILDALCKKHHVDKAIALLTK 389
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ G+ PD +Y I++ G C++ +L A RKV L L++G + D
Sbjct: 390 LKGQGIRPDMNTYTILVKGLCRSGKLEDA--------RKVFEDL-------LVKGYNLDV 434
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
Y +I +C +G + L L +M G +PD+ ++I L +K
Sbjct: 435 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 482
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 18/254 (7%)
Query: 26 RFTAARN------SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R A+N + I+ D+ TY+ ++ +CL+ V K I M+ +G++ + SY
Sbjct: 239 RVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYS 298
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-- 137
+I GFC + +A + EM K I PD TYS+LI LC R+S A L EM
Sbjct: 299 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDR 358
Query: 138 -SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
PD IT+ +++ A C + KA + ++ +G+ PD + TY ++ GLC
Sbjct: 359 GQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPD--------MNTYTILVKGLC 410
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G++E+A + + G + D +Y ++I GFC +A L +M+ D
Sbjct: 411 RSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP-DA 469
Query: 257 VTYAYLMQGLSDED 270
TY ++ L ++D
Sbjct: 470 KTYEIIILSLFEKD 483
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 172/424 (40%), Gaps = 76/424 (17%)
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFS 159
K P + ++ +L + L Q+M D + + L+++ C G
Sbjct: 7 HKNSTPPDIEFGKILGSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSILINSFCQLGHIP 66
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
AF + +++ G PD +T + +I GLC G + +AL + MG D
Sbjct: 67 FAFSVLAKILKNGYEPDTIT--------FTTLIKGLCLKGDIHQALHFHDKVIAMGFHLD 118
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED--------- 270
VSY +I+G C+ E R A EL +D K+V LD V Y+ ++ + +
Sbjct: 119 QVSYGTLINGLCKVGETRAALELLRRVDGKLVQ-LDAVMYSSIIDSMCKDKHVNDAFDLY 177
Query: 271 -------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
TY++LI+ +C G+L + L ++M + P+ S+L++G K+
Sbjct: 178 SEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKE 237
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG----- 371
R K+ K L +++ + P+ + Y +L++ C NE + + S RG
Sbjct: 238 GRVKEAKNVLAMMMKQGI---KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANV 294
Query: 372 --------------LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
+V+EA + M PD Y+ LI C+ + A + E
Sbjct: 295 QSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDE 354
Query: 418 M---------VRYGFV-------SHMFSVLALLTALRDHGM---YNERSWVIQNTLRSCN 458
M + Y + H+ +ALLT L+ G+ N + +++ RS
Sbjct: 355 MHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGK 414
Query: 459 LNDS 462
L D+
Sbjct: 415 LEDA 418
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY ++K C ++E + + KG + D +Y +I GFC+ +
Sbjct: 393 QGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 452
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M++ G +PDA TY +I +L K A L +EM+
Sbjct: 453 ALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 496
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 200/449 (44%), Gaps = 63/449 (14%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
I+ + T+N ++ C V + V +L M G P+ +SY ++ G +A
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHA 151
E +M G+ A TY+ LI+ C K EA L +EML + P +T+ T+M++
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVT------GFS---------------------PA 184
C G S A M+++ ++PD V+ G+S P+
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+ TYN +I G C G ++ A G+ M + GL PD V++ I++ GFCQ L A EL
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441
Query: 245 EMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
EM L +GL D Y + I G K + +EM +G PD
Sbjct: 442 EM---------------LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPD 486
Query: 304 SVIDSLLINGLDKKARTKDT-----KAHLLLIIADYM-YTSMPNYIIYDTLI---ENCSN 354
+ ++LINGL K D K L I+ D++ YTS+ + + L+ E +
Sbjct: 487 LITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 355 NEFK-----SVVG---LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
+ K SVV L+ S+++RG ++ A + D M + P+ YN LI+ C+
Sbjct: 547 DMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKEN 606
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
+ AYN++ EM G + ++ L+
Sbjct: 607 MMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 167/383 (43%), Gaps = 55/383 (14%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R+ +E + DL +YN +I + + + + + + K L P ++Y +I G
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGG 392
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
C A K +M + G+ PD T++ L++ C L A LF EMLS PD
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
I +TT + G SKAF M +M + GF P L TYN +I+GLC LG +
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAE--------GFPPDLITYNVLINGLCKLGNFD 504
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+A +++ M G+ PD V+Y +I + LRKA E+ +M +K G+
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKK---GIHPSVV--- 558
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY LI++Y +G L DEM KG P+ + + LI GL K+
Sbjct: 559 --------TYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKEN---- 606
Query: 323 TKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
++ +A ++ M PN Y LI SN ++ +A
Sbjct: 607 -----MMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQY---------------WQDA 646
Query: 377 ARAHDTMLEGNYKPDGAVYNLLI 399
+ + ML+ KPD ++ L+
Sbjct: 647 LKLYKDMLDREIKPDSCTHSALM 669
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 124/281 (44%), Gaps = 25/281 (8%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ T+ +++ C M + + M +GL PD ++Y I G P KA+ K
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK 475
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM +G PD TY+ LI LC +A L Q+M PD +T+T+++HA +
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G KA + M+ KG+ P++ TY +IH GR++ A M + G
Sbjct: 536 GLLRKAEEVFSDMLKKGI--------HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+SP+ ++Y +I G C+ + AY L EM+ K G+ Y TY L
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESK---GVSPNKY-----------TYTIL 633
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
IN L L +M + PDS S L+ L K
Sbjct: 634 INENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 154/376 (40%), Gaps = 50/376 (13%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M G+LPD + +++ L K ++E ++ M+ P +TF T+M + C EG
Sbjct: 162 KMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEG 221
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
E +A + M G P+ V+ YN +++GL G + A ++ M +GL
Sbjct: 222 EVGRAVEVLDVMRMFGCDPNDVS--------YNVLVNGLSGKGEFDRAKELIEQMSMLGL 273
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYASL 275
A +Y +I GFC+ +A +L+ EM L +G L TY ++
Sbjct: 274 KVSAHTYNPLIRGFCKKEMFEEANDLRREM---------------LGRGALPTVVTYNTI 318
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
+ + C G + D M ++ +PD V + LI G +R + LLL
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY---SRLGNFAEALLLFSELRS 375
Query: 336 YTSMPNYIIYDTLIEN-CSNNEFKSVVG-------------------LVKSFSMRGLVNE 375
+P+ + Y+TLI+ C G LV+ F G +
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
A D ML KPD Y I + N KA+ M EM GF + + L+
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495
Query: 436 ALRDHGMYNERSWVIQ 451
L G +++ + ++Q
Sbjct: 496 GLCKLGNFDDANELVQ 511
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E DL TYN +I C + + +++ M +G+ PD ++Y +I +
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
KA E +M +KGI P TY+ LI + + RL A F EM P+ IT+ L+
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C E A+++ +M KGV SP +TY +I+ L ++AL + +
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGV--------SPNKYTYTILINENSNLQYWQDALKLYK 651
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
M + + PD+ ++ ++ ++ +L L+ + W
Sbjct: 652 DMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENVIREGDTW 694
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 43/365 (11%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TY K+I C M + + + +LR + K ++ + + + +I C + +AYE +
Sbjct: 177 VTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQ 236
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M K I PD T++SLI C +L EA+ LF EM+ P+ TF L+ A C EG
Sbjct: 237 MIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGN 296
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A ++ M+ +GV+P+ V TY++I+ G C + V +A +L + MG+
Sbjct: 297 LKGAKNLLAVMMKEGVIPNVV--------TYSSIMDGYCLVNEVNKAKHVLSTITRMGVP 348
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------- 266
PDA SY I+I+GFC+ + + +A+ L EM + + + VTY+ L+ GL
Sbjct: 349 PDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGI-SPNTVTYSSLIDGLCKLGRISYAWE 407
Query: 267 -----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
D TY SLI+A C + K + L ++ +G + ++LI+GL
Sbjct: 408 FVDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLC 467
Query: 316 KKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENC-SNNEFKSVVGLVKSFS 368
K+ R KD + LL A+ + + M P+ + +T+I N++ + L++
Sbjct: 468 KQGRLKDAQG--LLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMI 525
Query: 369 MRGLV 373
RGL+
Sbjct: 526 ARGLL 530
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 18/223 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + ++ TY+ I+ +CL+ V K +L + G+ PDA SY +I GFC + +
Sbjct: 310 EGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINE 369
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A+ EM +GI P+ TYSSLI LC R+S A+ EM PPD T+ +L+
Sbjct: 370 AFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLID 429
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR- 209
A C KA + ++ +G+ + ++TYN +I GLC GR+++A G+L
Sbjct: 430 ALCKNHHVDKAIVLVKKIKDQGIQLN--------MYTYNILIDGLCKQGRLKDAQGLLNE 481
Query: 210 ------GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M + G PDAV+ +I +N + +A +L EM
Sbjct: 482 AETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREM 524
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 179/415 (43%), Gaps = 55/415 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D T+N +I +C + + I + + G P +++ +I G C N +A
Sbjct: 102 ITADTVTFNILINCYCHLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEAL 161
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F M + TY+ LI LC + +EA L +++ L + I T++ +
Sbjct: 162 HFHDHMLAHEFHLNQVTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSL 221
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C E ++A+ ++ QMI K + PD VT +N++I+G C +G++ EA G+ M
Sbjct: 222 CKEKLVTEAYELYSQMIVKKISPDVVT--------FNSLIYGFCIVGQLIEAFGLFHEMV 273
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
++P+ ++ I++ C+ L+ A L M ++ V + + TY
Sbjct: 274 LKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGV--------------IPNVVTY 319
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+S+++ YC E+ K + ++ G PD+ +++ING K + A
Sbjct: 320 SSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINE---------A 370
Query: 333 DYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
++ M PN + Y +LI+ GL K G ++ A D M +
Sbjct: 371 FSLFNEMRCRGISPNTVTYSSLID-----------GLCK----LGRISYAWEFVDEMRDN 415
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
PD YN LI C+ +V KA + ++ G +M++ L+ L G
Sbjct: 416 GQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQG 470
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 167/373 (44%), Gaps = 49/373 (13%)
Query: 72 SPDALSYRYVITGFC--NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
+P L + ++ NN A +++ GI D T++ LI C ++ A
Sbjct: 66 TPSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVTFNILINCYCHLGEMTFA 125
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMH-HQMIHKGVLPDFVTGFSPAL 185
+ +F ++L P ITF TL++ CL G+ +A H H H + H+ F
Sbjct: 126 FSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHE---------FHLNQ 176
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TY +I+GLC +G+ EAL +LR + ++ + + + +I C+ + + +AYEL +
Sbjct: 177 VTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQ 236
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
M K + D T+ SLI +C G+L + L EM K P+
Sbjct: 237 MIVKKIS--------------PDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVY 282
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLV 364
++L++ L K+ K K L +++ + + +PN + Y ++++ C NE
Sbjct: 283 TFNILVDALCKEGNLKGAKNLLAVMMKEGV---IPNVVTYSSIMDGYCLVNE-------- 331
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
VN+A T+ PD YN++I C+ +++A++++ EM G
Sbjct: 332 --------VNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGIS 383
Query: 425 SHMFSVLALLTAL 437
+ + +L+ L
Sbjct: 384 PNTVTYSSLIDGL 396
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 140/294 (47%), Gaps = 21/294 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D+ T+N +I C++ ++ + G+ M K ++P+ ++ ++ C
Sbjct: 240 KKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKG 299
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ---EMLSPPDDITFTTLMH 150
A M ++G++P+ TYSS++ C +++A H+ M PPD ++ +++
Sbjct: 300 AKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMIN 359
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C ++AF + ++M +G+ P+ V TY+++I GLC LGR+ A +
Sbjct: 360 GFCKIKMINEAFSLFNEMRCRGISPNTV--------TYSSLIDGLCKLGRISYAWEFVDE 411
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + G PD +Y +I C+N + KA L ++ + + L+ TY L+ GL +
Sbjct: 412 MRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQ-LNMYTYNILIDGLCKQG 470
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL---DKKARTK 321
AQG L + TL +M G +PD+V +I L DK R +
Sbjct: 471 RLKD------AQGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAE 518
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 126/303 (41%), Gaps = 42/303 (13%)
Query: 129 AYHLFQEMLSPPDDITFTTLMHACCL--EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
++H M P + F ++ + ++ A + HQ+ G+ D VT
Sbjct: 56 SFHRMLLMRPTPSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVT------- 108
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
+N +I+ C LG + A I + ++G P +++ +I+G C N ++++A M
Sbjct: 109 -FNILINCYCHLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFHDHM 167
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+ L++VTYA L+ GL C G+ + L L ++ K + ++
Sbjct: 168 LAH-EFHLNQVTYAKLINGL-------------CKMGKTTEALQLLRKIDGKLVNNNVIM 213
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
+ +I+ L K+ + Y +Y +I + + + L+
Sbjct: 214 HNTIIDSLCKEKLVTEA------------------YELYSQMIVKKISPDVVTFNSLIYG 255
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
F + G + EA M+ N P+ +N+L+ C+ N+ A N+ M++ G + +
Sbjct: 256 FCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPN 315
Query: 427 MFS 429
+ +
Sbjct: 316 VVT 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 36/263 (13%)
Query: 182 SPALFTYNAIIHGLCFLGR--VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+P++ +N I+ L A+ + + G++ D V++ I+I+ +C E+ A
Sbjct: 66 TPSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVTFNILINCYCHLGEMTFA 125
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM-SHK 298
+ + ++ + G T T+ +LIN C G++ + L D M +H+
Sbjct: 126 FSIFAKILK---LGHHPTTI-----------TFNTLINGMCLNGKIKEALHFHDHMLAHE 171
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
L + V + LINGL K +T T+A LL D + N I+++T+I+
Sbjct: 172 FHL-NQVTYAKLINGLCKMGKT--TEALQLLRKIDGKLVN-NNVIMHNTIID-------- 219
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
S LV EA + M+ PD +N LI+ C + +A+ ++ EM
Sbjct: 220 -------SLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEM 272
Query: 419 VRYGFVSHMFSVLALLTALRDHG 441
V ++++ L+ AL G
Sbjct: 273 VLKNINPNVYTFNILVDALCKEG 295
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 40/361 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y +I C + + + +LR + K + P+ + Y +I C + +A++ EM
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFS 159
KGI PD TYS+LI C +L++A LF +M+S PD TF+ L+ C EG
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+A ++ M+ +G+ PD V TY +++ G C + +V +A I M + G++ +
Sbjct: 284 EAKNVLAMMMKQGIKPDVV--------TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTAN 335
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------------ 267
SY I+I+GFC+ +++ +A L EM K + D VTY L+ GL
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP-DVVTYNSLIDGLCKSGKISYALKLV 394
Query: 268 ----------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
D+ TY S+++A C ++ K + L +M +G PD ++LI+GL K
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKG 454
Query: 318 ARTKDTKAHLL-LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNE 375
R KD + L++ Y T Y +I+ C N+ F + L+ G +
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYT----YTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510
Query: 376 A 376
A
Sbjct: 511 A 511
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 195/411 (47%), Gaps = 51/411 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T +IK CL ++ + + + G + + Y +I G C A + +
Sbjct: 128 TLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV 187
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
D K + P+ Y+++I ++C + ++EA+ L+ EM+S PD +T++ L+ C+ G+
Sbjct: 188 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKL 247
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+ A + ++MI + + PD ++T++ ++ G C GRV+EA +L M + G+ P
Sbjct: 248 NDAIGLFNKMISEEINPD--------VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG--LSDEDTYASLI 276
D V+Y ++ G+C +++ KA + + + QG ++ +Y +I
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSI----------------FNTMAQGGVTANVQSYNIMI 343
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
N +C ++ + + L EM K +PD V + LI+GL K + ++ L ++ +
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI----SYALKLVDEMHD 399
Query: 337 TSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+P + I Y+++++ C N++ + L+ G+ +PD
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI----------------QPDMYT 443
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
Y +LI C+ + A N++ +++ G+ +++ ++ D+ ++++
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDK 494
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 112/217 (51%), Gaps = 11/217 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY ++ +CL+++V K I MA+ G++ + SY +I GFC + +
Sbjct: 295 QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDE 354
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A EM K I+PD TY+SLI LC ++S A L EM P D IT+ +++
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + +M +G+ PD ++TY +I GLC GR+++A I
Sbjct: 415 ALCKNHQVDKAIALLTKMKDEGIQPD--------MYTYTILIDGLCKGGRLKDAQNIFED 466
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
+ G + +Y ++I GFC N KA L +M+
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 60/323 (18%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I D+ TY+ +I C++ ++ +G+ M + ++PD ++ ++ GFC
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 93 KAYEFKLEMDQKGILPDAFTYSSL-----------------------------------I 117
+A M ++GI PD TY SL I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343
Query: 118 QALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
C +++ EA +LF+EM PD +T+ +L+ C G+ S A + +M +GV
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
D + TYN+I+ LC +V++A+ +L M + G+ PD +Y I+I G C+
Sbjct: 404 HDKI--------TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
L+ A + ++ K + + TY ++QG D D + K L L +
Sbjct: 456 RLKDAQNIFEDLLVK-GYNITVYTYTVMIQGFCDNDLFD-------------KALALLSK 501
Query: 295 MSHKGSLPDSVIDSLLINGLDKK 317
M G +P++ ++I L +K
Sbjct: 502 MEDNGCIPNAKTYEIIILSLFEK 524
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 52/336 (15%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHM 164
P F + ++ +L A L +EM D +TF L++ FS+ H
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC------FSQLGHT 107
Query: 165 HHQM-IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
H + +L G+ P T +I GLC G++ +AL + +G + V Y
Sbjct: 108 HFSFSVFANILK---KGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCY 164
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWG--------LDEVTYAYLM------------ 263
+I+G C+ + A +L +D K+V +D + L+
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 224
Query: 264 QGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+G+S D TY++LI+ +C G+L + L ++M + PD S+L++G K+ R K+
Sbjct: 225 KGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKE 284
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
K L +++ + P+ + Y CS L+ + + VN+A +T
Sbjct: 285 AKNVLAMMMKQGI---KPDVVTY------CS---------LMDGYCLVKQVNKAKSIFNT 326
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
M +G + YN++I C+ V +A N++ EM
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E IQ D+ TY +I C R++ I + KG + +Y +I GFC+N K
Sbjct: 435 EGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDK 494
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G +P+A TY +I +L K A L +EM++
Sbjct: 495 ALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIA 539
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D TYN I+ C +V+K + +L M ++G+ PD +Y +I G C A
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
++ KG +TY+ +IQ C +A L +M P+ T+ ++ +
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL 521
Query: 153 CLEGEFSKAFHMHHQMIHKGVL 174
+ E A + +MI +G+L
Sbjct: 522 FEKDENDMAEKLLREMIARGLL 543
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 43/372 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q + +Y +I C + + + + +LR + K + D + Y +I G C ++ A++
Sbjct: 171 QLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFD 230
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
F EM K I P TY++LI LC +L +A L +M+ P TF+ L+ A C
Sbjct: 231 FYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFC 290
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A ++ M+ K V P+ VT YN++++G C + V +A I M +
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVT--------YNSLMNGYCLVNEVNKAESIFNTMAQ 342
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
+G++PD SY I+ISGFC+ + + +A +L EM K Q D TY
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCK--------------QIFPDVVTYN 388
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
SLI+ C G + L L EM +G P+ + + L++ L K D LL + D
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHV-DKAIELLTKLKD 447
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ P+ Y+ LI GL KS G + +A + + +L Y D
Sbjct: 448 --HNIQPSVCTYNILIN-----------GLCKS----GRLKDAQKVFEDVLVNGYNIDVY 490
Query: 394 VYNLLIFDHCRR 405
YN +I C++
Sbjct: 491 TYNTMIKGFCKK 502
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TYN ++ +CL+ V K I MA+ G++PD SY +I+GFC + +
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A + EM K I PD TY+SLI LC R+S A L EM PP+ IT+ +L+
Sbjct: 368 AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLD 427
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C KA + ++ + P++ TYN +I+GLC GR+++A +
Sbjct: 428 ALCKNHHVDKAIELLTKLKDHNI--------QPSVCTYNILINGLCKSGRLKDAQKVFED 479
Query: 211 MPEMGLSPDAVSYIIVISGFCQ 232
+ G + D +Y +I GFC+
Sbjct: 480 VLVNGYNIDVYTYNTMIKGFCK 501
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 25/253 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I + T++ ++ C +V++ + M +K + P+ ++Y ++ G+C K
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q G+ PD +YS +I C + + EA LF+EM PD +T+ +L+
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G S A + +M +G P+ + TYN+++ LC V++A+ +L
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNII--------TYNSLLDALCKNHHVDKAIELLTK 444
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ + + P +Y I+I+G C++ L+ A ++ + +V G + Y
Sbjct: 445 LKDHNIQPSVCTYNILINGLCKSGRLKDAQKV---FEDVLVNGYNIDVY----------- 490
Query: 271 TYASLINAYCAQG 283
TY ++I +C +G
Sbjct: 491 TYNTMIKGFCKKG 503
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 133/343 (38%), Gaps = 70/343 (20%)
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------ 179
+S HL + P I F ++ + +S +H QM G+ + VT
Sbjct: 53 VSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILIN 112
Query: 180 ---------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
G+ P T +I GLC G + +AL + +G
Sbjct: 113 CFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQL 172
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED-------- 270
+ VSY +I+G C+ + + A E+ +D K+V LD V Y ++ G+ +
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVR-LDVVMYNTIIDGVCKDKLVNDAFDF 231
Query: 271 --------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
TY +LI C G+L + L +M + P S+L++ K
Sbjct: 232 YSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCK 291
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNE 375
+ + K+ K ++++ PN + Y++L+ C NE VN+
Sbjct: 292 EGKVKEAKNVFVVMMKK---DVKPNIVTYNSLMNGYCLVNE----------------VNK 332
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
A +TM + PD Y+++I C+ V +A ++ EM
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 191/398 (47%), Gaps = 62/398 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I ++ TYN ++ C++ +++ + + + M + ++P ++ ++ GFC G
Sbjct: 236 AKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFNILVDGFCKE---G 292
Query: 93 KAYEFKLE---MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFT 146
K + K+ M + G+ +A TYS+LI+ C +L EA LF +M+ P+ TFT
Sbjct: 293 KVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFT 352
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
L+ A C E + KA ++ + M+ K V P+ +T Y+ +++G C + V EA
Sbjct: 353 ILVDAFCKEEKIDKANYVLNVMMEKDVTPNVIT--------YSCLLYGYCLVNEVNEAKR 404
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
I + M + G++ D +SY I+IS FC+ + + +A +L EM K ++ D VTY+ L+ GL
Sbjct: 405 IFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFP-DVVTYSSLVDGL 463
Query: 267 SDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
+ TY+S+++A + ++ + + L E KG P+
Sbjct: 464 CKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNV 523
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN---NEFKSVV 361
++ I+GL K R +D + +++ L+ N N N++ V
Sbjct: 524 YTYTIFIDGLCKNGRLEDA------------------WEVFEDLLVNSYNHNRNKYTWTV 565
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
++ F +GL +EA M + + PD Y +I
Sbjct: 566 -MIHGFCRKGLFDEALTLLSNMKDNSCIPDTVTYKTII 602
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 25/319 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ T+ ++ C ++++K +L M EK ++P+ ++Y ++ G+C +A
Sbjct: 344 VNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGYCLVNEVNEAK 403
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
M Q+G+ D +Y+ +I C + + EA LF+EM S PD +T+++L+
Sbjct: 404 RIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGL 463
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C A + +M +G P+ +FTY++I+ L +VEEA+ + +
Sbjct: 464 CKSERIPNALKLVDEMHDRGQPPN--------IFTYSSILDALLKKHQVEEAIELFKEFK 515
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ G+ P+ +Y I I G C+N L A+E+ ++ +V + Y T+
Sbjct: 516 DKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDL---LVNSYNHNRNKY---------TW 563
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+I+ +C +G + LTL M +PD+V +I+ L K KD L +IA
Sbjct: 564 TVMIHGFCRKGLFDEALTLLSNMKDNSCIPDTVTYKTIISSLLDKGE-KDKARKLCELIA 622
Query: 333 DYMYTSMPNYIIYDTLIEN 351
+T+ N+I++ ++I N
Sbjct: 623 SGNFTNT-NFIVFVSVISN 640
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 197/430 (45%), Gaps = 52/430 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ ++ +L T+N ++ + + ++ +L + + G PD +++ +I G+C
Sbjct: 96 NDGVKPNLVTFNILLNCYSHLGQMSFAFSVLAKIIKIGYHPDVVTFNTLINGYCLKGEND 155
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLM 149
+ F ++ G + +Y +LI LC EA L +++ L P + + L+
Sbjct: 156 ELLRFYDKVVGLGFQLNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLI 215
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C + + AF ++++M+ K + SP + TYN ++HGLC +G++++A+ + +
Sbjct: 216 DRMCKDKLVNVAFDLYYEMLAKRI--------SPNVITYNTLLHGLCIVGQLKDAISLFK 267
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ-GLS- 267
M ++P ++ I++ GFC+ +++ A +V A +M+ G+
Sbjct: 268 IMVSENINPTVYTFNILVDGFCKEGKVKDA----------------KVVLAVMMKAGVKL 311
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
+ TY++LI +C G+L + + L ++M P+ ++L++ K+ + D ++
Sbjct: 312 NAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKI-DKANYV 370
Query: 328 LLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG--------------- 371
L ++ + T PN I Y L+ C NE + KS + RG
Sbjct: 371 LNVMMEKDVT--PNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKF 428
Query: 372 ----LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
+V+EA + + M PD Y+ L+ C+ + A + EM G ++
Sbjct: 429 CKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNI 488
Query: 428 FSVLALLTAL 437
F+ ++L AL
Sbjct: 489 FTYSSILDAL 498
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R + + D+ +Y +I + C ++ V++ + M K + PD ++Y ++ G
Sbjct: 404 RIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGL 463
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C + A + EM +G P+ FTYSS++ AL K ++ EA LF+E P+
Sbjct: 464 CKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNV 523
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T+T + C G A+ + ++ + +T+ +IHG C G +
Sbjct: 524 YTYTIFIDGLCKNGRLEDAWEVFEDLLVNSY------NHNRNKYTWTVMIHGFCRKGLFD 577
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
EAL +L M + PD V+Y +IS E KA +L
Sbjct: 578 EALTLLSNMKDNSCIPDTVTYKTIISSLLDKGEKDKARKL 617
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 179/389 (46%), Gaps = 35/389 (8%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + + +LR + K + P+ + Y +I C + +A++
Sbjct: 6 DQVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 65
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
EM +GI PD TYS+LI +L +A LF +M+ PD TF L+ C +
Sbjct: 66 SEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 125
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ + + M+ +G+ P+ V TY +++ G C + +V +A I M + G
Sbjct: 126 GKMKEGKTVFAMMMKQGIKPNVV--------TYCSLMDGYCLVKQVNKANSIFNTMAQGG 177
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++PD SY I+I+GFC+ +++ +A L +M K + + + TY SL
Sbjct: 178 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI--------------IPNVVTYTSL 223
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ C G++ L L DEM +G PD + S +++ L K + A L
Sbjct: 224 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL-------- 275
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
T + + + D ++ + + + V +++ F ++GL NEA M + PD Y
Sbjct: 276 -TKLKDQVFEDLFVKGYNLDVYAYTV-MIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 333
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
++I ++ A + EM+ G +
Sbjct: 334 EIIILSLFKKDENDMAEKLLREMIARGLL 362
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ ++ TY ++ +CL+++V K I MA+ G++PD SY +I GFC + +
Sbjct: 141 QGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDE 200
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A +M K I+P+ TY+SLI LC ++S A L EM PPD IT+++++
Sbjct: 201 AMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILD 260
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + ++ + FV G++ ++ Y +I G C G EAL +L
Sbjct: 261 ALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSK 320
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M + G PDA +Y I+I + E A +L EM
Sbjct: 321 MEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 356
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 153/337 (45%), Gaps = 48/337 (14%)
Query: 21 NGVVCRFTAAR---------NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
NG+ C+ AR + + +Q ++ YN II C ++ V + + M +G+
Sbjct: 15 NGL-CKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGI 73
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
SPD ++Y +I+GF A + +M + I PD +T++ L+ C ++ E
Sbjct: 74 SPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 133
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD------FVTGFS 182
+F M+ P+ +T+ +LM CL + +KA + + M GV PD + GF
Sbjct: 134 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFC 193
Query: 183 ---------------------PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
P + TY ++I GLC G++ AL ++ M + G+ PD +
Sbjct: 194 KIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDII 253
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYC 280
+Y ++ C+N ++ KA L ++ D+V ++G + D Y +I +C
Sbjct: 254 TYSSILDALCKNHQVDKAIALLTKLK-------DQVFEDLFVKGYNLDVYAYTVMIQGFC 306
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
+G + L L +M G +PD+ ++I L KK
Sbjct: 307 VKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKK 343
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 34/263 (12%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF +Y +I+GLC +G+ AL +LR + + P+ V Y +I C+ + + +A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 61
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
++L EM + +G+S D TY++LI+ + G+L + L ++M +
Sbjct: 62 FDLYSEM---------------VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE 106
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
PD ++L++G K + K+ K +++ + PN + Y CS
Sbjct: 107 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI---KPNVVTY------CS----- 152
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
L+ + + VN+A +TM +G PD YN++I C+ V +A N++ +M
Sbjct: 153 ----LMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKM 208
Query: 419 VRYGFVSHMFSVLALLTALRDHG 441
+ ++ + +L+ L G
Sbjct: 209 HCKNIIPNVVTYTSLIDGLCKSG 231
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE--------KGLSPDALSYRYVITGFC 86
+ D+ TY+ I+ C +V+K + +L + + KG + D +Y +I GFC
Sbjct: 247 GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFC 306
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
+A +M+ G +PDA TY +I +L K A L +EM++
Sbjct: 307 VKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 358
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 197/483 (40%), Gaps = 90/483 (18%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILR-----------GMAEKGLSPDALSYRYVITGFCNNR 89
+Y +I C RV + V +LR G KG + + Y VI C N
Sbjct: 148 VSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNG 204
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FT 146
+ +EF EM G+ P+ FTY SLI+ LC + E + L EM+ D++ FT
Sbjct: 205 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 264
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------------------------- 179
L+ C G +A M +M+++G P+ VT
Sbjct: 265 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 324
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF ++TYN IHG C +GRV +A+ + M G+ P+ V+Y +I C+ E+ A
Sbjct: 325 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 384
Query: 240 YELKVEMDRKVVWGL--DEVTYAYLMQGLS----------------------DEDTYASL 275
+E+ M R GL D VT L+ GL D +Y L
Sbjct: 385 WEIVKTMHRS---GLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 441
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ C + + + L +M K +P V S LI+GL + R + L+ ++
Sbjct: 442 IHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR---LLNEMHV 498
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
+P+ I Y L++ + + ++EA + M++ +PD Y
Sbjct: 499 KGPLPDTITYSILLD---------------ALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 543
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
++I +C+ + +A N++ EM V + + L A+ G N W N +R
Sbjct: 544 TIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS-NSYEWKFVNVIR 602
Query: 456 SCN 458
N
Sbjct: 603 DIN 605
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 25/287 (8%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
++D+ TYN I +C + RV V + M +G+ P+ ++Y +I C A
Sbjct: 325 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 384
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+E M + G+ PD T L+ LC +RL +A LF +++ PD ++T L+H
Sbjct: 385 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 444
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
CC +A ++ M K ++P V TY+ +I GLC GR+ A +L M
Sbjct: 445 CCTSRRMGEAMNLLRDMHLKNLVPHIV--------TYSCLIDGLCRSGRISNAWRLLNEM 496
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G PD ++Y I++ + + L +A L +M ++ GL+ D
Sbjct: 497 HVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKR---GLE-----------PDVMC 542
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
Y +I+ YC + + + L EM K +PD V ++L N + K
Sbjct: 543 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 589
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 25/259 (9%)
Query: 11 TLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG 70
++ F M R GVV ++ TYN +I C V I++ M G
Sbjct: 349 AVRVFDEMCREGVV-------------PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 395
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
L+PD ++ ++ G C ++ +A ++ + G+ PD ++Y+ LI C+ RR+ EA
Sbjct: 396 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 455
Query: 131 HLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
+L ++M P +T++ L+ C G S A+ + ++M KG LPD + T
Sbjct: 456 NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI--------T 507
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
Y+ ++ L ++EA+ + M + GL PD + Y I+I G+C++ + +A L EM
Sbjct: 508 YSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMH 567
Query: 248 RKVVWGLDEVTYAYLMQGL 266
K + D VTY L +
Sbjct: 568 MKNLVP-DIVTYTILFNAV 585
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 173/426 (40%), Gaps = 61/426 (14%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
I + ++G D ++ V+ G C N KA EF E+ G + +Y LI LC
Sbjct: 99 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 158
Query: 122 SKRRLSEAYHLFQEM-----------LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
R++EA +L + + + + ++ ++ C G + F +++M+
Sbjct: 159 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 218
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
GV P+ FTY ++I GLC +G+ E G++ M GL + ++I G
Sbjct: 219 NGVCPN--------EFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 270
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLT 290
C+N L +A E+ EM V Y + T +L+ YC +G +
Sbjct: 271 CKNGMLVEAREMFDEM----------VNRGY----EPNIVTCTALMGGYCLKGNVDMARE 316
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTL 348
L D + G D ++ I+G K R +D + + D M +PN + Y++L
Sbjct: 317 LFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA-----VRVFDEMCREGVVPNIVTYNSL 371
Query: 349 IEN-CSNNEFKSVVGLVKSFSMRGL-------------------VNEAARAHDTMLEGNY 388
I+ C E +VK+ GL +++A + ++E
Sbjct: 372 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 431
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
PD Y +LI C + +A N+ +M V H+ + L+ L G + +W
Sbjct: 432 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISN-AW 490
Query: 449 VIQNTL 454
+ N +
Sbjct: 491 RLLNEM 496
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 51/329 (15%)
Query: 162 FHMHHQMIHKGVLPDFVT-GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
FH+ H + + G+ N ++ GLC G V +AL + G S +
Sbjct: 88 FHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNE 147
Query: 221 VSYIIVISGFCQNRELRKAYEL--------KVEMDRKVVWGLDEVTYAYLM-----QGLS 267
VSY I+I+G C+N + +A L + E D V G + V Y+ ++ G
Sbjct: 148 VSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG-NVVMYSIVIDCLCRNGFV 206
Query: 268 DED-----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
DE TY SLI C G+ + L DEM +G + ++L
Sbjct: 207 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 266
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMR 370
I+GL K +L+ A M+ M N Y+ I C+ L+ + ++
Sbjct: 267 IDGLCKNG---------MLVEAREMFDEMVNR-GYEPNIVTCT--------ALMGGYCLK 308
Query: 371 GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
G V+ A D + E +K D YN+ I +C+ V A ++ EM R G V ++ +
Sbjct: 309 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 368
Query: 431 LALLTALRDHGMYNERSWVIQNTLRSCNL 459
+L+ L G + +W I T+ L
Sbjct: 369 NSLIDCLCKAGEVSG-AWEIVKTMHRSGL 396
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 190/438 (43%), Gaps = 64/438 (14%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+IQ + ++N +IK C + V++ V + RGM+++ D +Y ++ G CN +A
Sbjct: 170 NIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEA 229
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHA 151
EM +G P+ ++ LI ALC K LS A L M P+++T+ +L+H
Sbjct: 230 VSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHG 289
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPA 184
CL+G+ KA + ++M+ +P+ +T G+
Sbjct: 290 LCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGN 349
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
F+Y+++I GL G+ E + + + M E G P+ + Y +I G C+ + +A E +
Sbjct: 350 EFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLI 409
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
EM K G ++ TY+SL+ Y G++ K + + EM+
Sbjct: 410 EMKNK---GHTPNSF-----------TYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 455
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLV 364
V S+LINGL K + K+ I++ ++ + + ++
Sbjct: 456 VCYSILINGLCKNGKLKEA------------------LIVWKQMLSRGIKLDVVAYSSMI 497
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYK--PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
F LV + + + ML N K PD YN+L+ C + +V +A ++ M+ G
Sbjct: 498 HGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQG 557
Query: 423 FVSHMFSVLALLTALRDH 440
+ L LRD+
Sbjct: 558 CDPDFITCDIFLKTLRDN 575
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 177/387 (45%), Gaps = 54/387 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K + P + Y +I G C ++ A++
Sbjct: 6 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I PD FTY++LI C +L +A LF +M PD TF L+ A C E
Sbjct: 66 SEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKE 125
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A ++ M+ +G+ P+ V TY+A++ G C + +V +A I M + G
Sbjct: 126 GKMKEAKNVLAMMMKQGMKPNVV--------TYSALMDGYCLVKKVNKAKSIFNTMAQGG 177
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGL-------- 266
++PD SY I+I+G C+ + +A L EM RK++ D VTY L+ GL
Sbjct: 178 VNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIP--DVVTYNSLIDGLCKLGKISY 235
Query: 267 --------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
D TY+S+++A C ++ K + L ++ +G P+ ++LI+
Sbjct: 236 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 295
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
GL K R D AH I++ L+ N + ++ F +GL
Sbjct: 296 GLCKGGRLDD--AH----------------NIFEDLLVKGYNITVNTYTVMIHGFCNKGL 337
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLI 399
+EA M + + P+ Y ++I
Sbjct: 338 FDEALALLSKMKDNSCFPNALTYEIII 364
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 25/284 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I D+ T+N ++ C ++++ +L M ++G+ P+ ++Y ++ G+C + K
Sbjct: 106 ENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNK 165
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q G+ PD +YS LI LC + EA +LF+EM PD +T+ +L+
Sbjct: 166 AKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLID 225
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G+ S A + +M +GV PD + TY++I+ LC +V++A+ +L
Sbjct: 226 GLCKLGKISYALKLVDEMHDRGVPPDII--------TYSSILDALCKNHQVDKAIALLTK 277
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ + G+ P+ +Y I+I G C+ L A+ + ++ +V G + +
Sbjct: 278 LKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDL---LVKGYNITV-----------N 323
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
TY +I+ +C +G + L L +M P+++ ++I L
Sbjct: 324 TYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSL 367
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 12/238 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TY+ ++ +CL+++V K I MA+ G++PD SY +I G C + +
Sbjct: 141 QGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDE 200
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A EM + I+PD TY+SLI LC ++S A L EM PPD IT+++++
Sbjct: 201 AMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD 260
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + ++ +G+ P+ ++TY +I GLC GR+++A I
Sbjct: 261 ALCKNHQVDKAIALLTKLKDQGIRPN--------MYTYTILIDGLCKGGRLDDAHNIFED 312
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ G + +Y ++I GFC +A L +M + + +TY +++ L D
Sbjct: 313 LLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFP-NALTYEIIIRSLFD 369
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 161/350 (46%), Gaps = 45/350 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMH 165
D +Y +LI LC A L + + L P + + T++ C + + AF ++
Sbjct: 6 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYII 225
+M+ K + PD +FTYNA+I G C +G++++A+G+ M ++PD ++ I
Sbjct: 66 SEMVSKRISPD--------VFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNI 117
Query: 226 VISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGE 284
++ FC+ ++++A + M + QG+ + TY++L++ YC +
Sbjct: 118 LVDAFCKEGKMKEAKNVLAMM---------------MKQGMKPNVVTYSALMDGYCLVKK 162
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ K ++ + M+ G PD S+LINGL + K T + L + +P+ +
Sbjct: 163 VNKAKSIFNTMAQGGVNPDIHSYSILINGL---CKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 345 YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
Y++LI+ GL K G ++ A + D M + PD Y+ ++ C+
Sbjct: 220 YNSLID-----------GLCK----LGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 264
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
V KA + ++ G +M++ L+ L G ++ + ++ L
Sbjct: 265 NHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLL 314
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF +Y +I+GLC +G AL +LR + + P V Y +I G C+++ + A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
++L EM K + D TY +LI+ +C G+L + L ++M+ +
Sbjct: 62 FDLYSEMVSKRIS--------------PDVFTYNALISGFCIVGKLKDAIGLFNKMTLEN 107
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
PD ++L++ K+ + K+ K L +++ M PN + Y L++
Sbjct: 108 INPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGM---KPNVVTYSALMD--------- 155
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ + VN+A +TM +G PD Y++LI C+ +A N++ EM
Sbjct: 156 ------GYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEM 208
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 178/387 (45%), Gaps = 35/387 (9%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
+Y +I C + + + +LR + K + P+ + Y +I C + +A++ E
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGE 157
M +GI PD TYS+LI +L +A LF +M+ PD TF L+ C +G+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+ + M+ +G+ P+ V TY +++ G C + +V +A I M + G++
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVV--------TYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD SY I+I+GFC+ +++ +A L +M K + + + TY SLI+
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI--------------IPNVVTYTSLID 361
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
C G++ L L DEM +G PD + S +++ L K + A L T
Sbjct: 362 GLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL---------T 412
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
+ + + D ++ + + + V +++ F ++GL NEA M + PD Y +
Sbjct: 413 KLKDQVFEDLFVKGYNLDVYAYTV-MIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEI 471
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+I ++ A + EM+ G +
Sbjct: 472 IILSLFKKDENDMAEKLLREMIARGLL 498
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ ++ TY ++ +CL+++V K I MA+ G++PD SY +I GFC + +
Sbjct: 277 QGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDE 336
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A +M K I+P+ TY+SLI LC ++S A L EM PPD IT+++++
Sbjct: 337 AMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILD 396
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + ++ + FV G++ ++ Y +I G C G EAL +L
Sbjct: 397 ALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSK 456
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M + G PDA +Y I+I + E A +L EM
Sbjct: 457 MEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 38/313 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+Q ++ YN II C ++ V + + M +G+SPD ++Y +I+GF A
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ +M + I PD +T++ L+ C ++ E +F M+ P+ +T+ +LM
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPD------FVTGFS---------------------PAL 185
CL + +KA + + M GV PD + GF P +
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TY ++I GLC G++ AL ++ M + G+ PD ++Y ++ C+N ++ KA L +
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 413
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
+ D+V ++G + D Y +I +C +G + L L +M G +PD+
Sbjct: 414 LK-------DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDA 466
Query: 305 VIDSLLINGLDKK 317
++I L KK
Sbjct: 467 KTYEIIILSLFKK 479
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 160/382 (41%), Gaps = 67/382 (17%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
R + +K +P + ++ C A +M+ KGI + T + LI
Sbjct: 49 RLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQL 108
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+ ++ +F +L P+ IT TTL+ CL+
Sbjct: 109 GQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK------------------------- 143
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+Y +I+GLC +G+ AL +LR + + P+ V Y +I C+ + + +A+
Sbjct: 144 -----VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 198
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+L EM + +G+S D TY++LI+ + G+L + L ++M +
Sbjct: 199 DLYSEM---------------VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN 243
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
PD ++L++G K + K+ K +++ + PN + Y CS
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI---KPNVVTY------CS------ 288
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
L+ + + VN+A +TM +G PD YN++I C+ V +A N++ +M
Sbjct: 289 ---LMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMH 345
Query: 420 RYGFVSHMFSVLALLTALRDHG 441
+ ++ + +L+ L G
Sbjct: 346 CKNIIPNVVTYTSLIDGLCKSG 367
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE--------KGLSPDALSYRYVITGFCN 87
+ D+ TY+ I+ C +V+K + +L + + KG + D +Y +I GFC
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 443
Query: 88 NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
+A +M+ G +PDA TY +I +L K A L +EM++
Sbjct: 444 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 494
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 30/243 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ T+ ++ +CL+ V K + M ++G+ P+ Y VI G C N+ +
Sbjct: 293 QGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDE 352
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A +F EM K I+P+ TYSSLI LC R+S A+ L EM P + ITF++L+H
Sbjct: 353 AMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLH 412
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPD---------------------------FVTGFSP 183
A C KA + ++ + + P+ F+ G++
Sbjct: 413 ALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNL 472
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
++TYN +I+GLC G ++EAL +L M + G P+AV++ I++ +N E KA +L
Sbjct: 473 TVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENEKAEKLL 532
Query: 244 VEM 246
EM
Sbjct: 533 REM 535
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 182/411 (44%), Gaps = 52/411 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K ++ D + Y +I C + +AYE
Sbjct: 158 DQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELY 217
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I P T+SSLI C + +A+ LF EM+ P+ TF L+ A C E
Sbjct: 218 SEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILVDALCKE 277
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A ++ M+ +GV PD V T+ +++ G C + V +A + M + G
Sbjct: 278 GKMKEAKNVLAMMVKQGVKPDIV--------THTSLMDGYCLVNEVNKAKALFNTMVQRG 329
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--------- 266
+ P+ Y +VI+G C+N+ + +A + EM K + + VTY+ L+ GL
Sbjct: 330 VMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIP-NTVTYSSLIDGLCKSGRISHA 388
Query: 267 -------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
++ T++SL++A C + K + L ++ + P+ ++LI+G
Sbjct: 389 WELLDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDG 448
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L K+ R KD + +I ++ N ++ I ++ + GL+
Sbjct: 449 LCKQGRLKDAQ-----VIFQDLFIKGYNLTVWTYNI-------------MINGLCLEGLL 490
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+EA M + P+ + +++ + KA + EM+ G +
Sbjct: 491 DEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENEKAEKLLREMIARGLL 541
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 193/412 (46%), Gaps = 47/412 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ T +IK CL +V++ + + G D +SY +I G C A +
Sbjct: 123 DIVTLTTLIKGMCLNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQML 182
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
+++ K + D Y+++I +LC ++ ++EAY L+ EM++ P +TF++L++ C+
Sbjct: 183 RKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIV 242
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+F AF + ++M+ K + +P ++T+N ++ LC G+++EA +L M + G
Sbjct: 243 GQFKDAFRLFNEMVLKNI--------NPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQG 294
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+ PD V++ ++ G+C E+ KA L M ++ V + + Y+ +
Sbjct: 295 VKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGV--------------MPNVHCYSVV 340
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
IN C + + + EM K +P++V S LI+GL K R +H ++ +
Sbjct: 341 INGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRI----SHAWELLDEMH 396
Query: 336 YTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
P N I + +L+ C N + LVK R + +P+
Sbjct: 397 DRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDI----------------QPNMY 440
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI C++ + A ++ ++ G+ +++ ++ L G+ +E
Sbjct: 441 TYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTYNIMINGLCLEGLLDE 492
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 150/307 (48%), Gaps = 35/307 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I ++ T+N ++ C ++++ +L M ++G+ PD +++ ++ G+C K
Sbjct: 258 KNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNK 317
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q+G++P+ YS +I LC + + EA F+EM S P+ +T+++L+
Sbjct: 318 AKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLID 377
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA-LFTYNAIIHGLCFLGRVEEALGILR 209
C G S A+ + +M +G PA + T+++++H LC V++A+ +++
Sbjct: 378 GLCKSGRISHAWELLDEMHDRG---------QPANVITFSSLLHALCKNRHVDKAIELVK 428
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKA----YELKVEMDRKVVWGLDEVTYAYLMQG 265
+ + + P+ +Y I+I G C+ L+ A +L ++ VW
Sbjct: 429 KLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVW------------- 475
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
TY +IN C +G L + L L +M G +P++V ++++ L K + +
Sbjct: 476 -----TYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENEKAEK 530
Query: 326 HLLLIIA 332
L +IA
Sbjct: 531 LLREMIA 537
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 178/425 (41%), Gaps = 64/425 (15%)
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
+ + + G++P +++ VI +C+ A+ ++ + G PD T ++LI+
Sbjct: 73 AISLFYQLELNGITPSIVTFNIVINCYCHLSEMNFAFSLLGKILKVGFHPDIVTLTTLIK 132
Query: 119 ALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
+C ++ EA H ++S D +++ TL++ C GE A M ++ K V
Sbjct: 133 GMCLNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNT 192
Query: 176 DFV---------------------------TGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
D V SP + T++++I+G C +G+ ++A +
Sbjct: 193 DVVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLF 252
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS- 267
M ++P+ ++ I++ C+ ++++A + M + QG+
Sbjct: 253 NEMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVK---------------QGVKP 297
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
D T+ SL++ YC E+ K L + M +G +P+ S++INGL K +
Sbjct: 298 DIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFF 357
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+ + + +PN + Y +LI+ GL KS G ++ A D M +
Sbjct: 358 KEMQSKKI---IPNTVTYSSLID-----------GLCKS----GRISHAWELLDEMHDRG 399
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERS 447
+ ++ L+ C+ +V KA + ++ +M++ L+ L G +
Sbjct: 400 QPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQ 459
Query: 448 WVIQN 452
+ Q+
Sbjct: 460 VIFQD 464
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F S+ I + TY+ +I C R+ +L M ++G + +++ ++ C
Sbjct: 356 FFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALC 415
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFT 146
NR KA E ++ + I P+ +TY+ LI LC + RL +A +FQ++ ++T
Sbjct: 416 KNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVW 475
Query: 147 T---LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
T +++ CLEG +A + +M G +P+ V T+ I+H L E+
Sbjct: 476 TYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAV--------TFEIIVHALFKNDENEK 527
Query: 204 ALGILRGMPEMGL 216
A +LR M GL
Sbjct: 528 AEKLLREMIARGL 540
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGF--------SPALFTYNAIIHGLCFLGR--VEEALGI 207
F++ + H + + V+ F +P++ +N I+ L A+ +
Sbjct: 17 FTRTLYYSHSRFVPNNVDNVVSSFNHILHMNPTPSIIEFNKILGSLVKSNNKHYPTAISL 76
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
+ G++P V++ IVI+ +C E+ A+ L ++ KV + D VT L++G+
Sbjct: 77 FYQLELNGITPSIVTFNIVINCYCHLSEMNFAFSLLGKI-LKVGFHPDIVTLTTLIKGM- 134
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
C G++ + L D + G D V LINGL K T+ L
Sbjct: 135 ------------CLNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQML 182
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
I + T + ++Y+T+I+ S LV EA + M+
Sbjct: 183 RKIEGKLVNTDV---VMYNTIID---------------SLCKEKLVTEAYELYSEMITKT 224
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERS 447
P ++ LI+ C A+ ++ EMV ++++ L+ AL G E
Sbjct: 225 ISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILVDALCKEGKMKEAK 284
Query: 448 WVI 450
V+
Sbjct: 285 NVL 287
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 166/384 (43%), Gaps = 52/384 (13%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T++ +I C VE+G G+L M + GL D Y +I+GFC+ + E EM
Sbjct: 201 TFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEM 260
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+K + P+ TYS L+ ALC K++ EA + M PD + +T L G
Sbjct: 261 LRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRA 320
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
S A + M+ +G P+ VT YNAII+GLC GRV++ALGIL M + G P
Sbjct: 321 SDAIKVLDLMVKRGEEPNNVT--------YNAIINGLCKEGRVDDALGILETMAKKGKKP 372
Query: 219 DAVSYIIVISGFCQNRELRKAYEL-KVEMDRKVVWGLDEVTYAYLMQGL----------- 266
D V+Y ++ G C ++ +A +L + M ++ D + ++Q L
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKR 432
Query: 267 -----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
S+ TY LI+ Y + G+L K L L + G P++ ++LINGL
Sbjct: 433 VYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC 492
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
K K L + P Y+TL+ S V +
Sbjct: 493 KMQMLSIAKG---LFNKKRASGTRPTVSEYNTLMA---------------SLCRESSVEQ 534
Query: 376 AARAHDTMLEGNYKPDGAVYNLLI 399
A M N+ PD +N++I
Sbjct: 535 ARNLFQEMRNANHDPDVVSFNIII 558
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 185/404 (45%), Gaps = 49/404 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S S+ + + +I+ Q+ G+L + ++G + ++ ++ GFC +
Sbjct: 87 SVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSH 146
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA + M + ++PD +Y+++I LC +RL EA LF+EM P+ +TF+ L+
Sbjct: 147 KAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALI 206
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C G+ + F + +M G+ D +F Y+A+I G C G +E +
Sbjct: 207 DGFCKNGDVEEGFGLLEEMEKMGLEGD--------VFVYSALISGFCSKGDIERGKELFN 258
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M ++P+ V+Y +++ C+ ++ ++A ++ M V D V Y L GLS
Sbjct: 259 EMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRP-DVVAYTVLADGLSKN 317
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
+ I KVL D M +G P++V + +INGL K+ R D L
Sbjct: 318 GRASDAI----------KVL---DLMVKRGEEPNNVTYNAIINGLCKEGRVDDA-----L 359
Query: 330 IIADYMYT--SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
I + M P+ + Y TL+ K + G+ G ++EA + ++
Sbjct: 360 GILETMAKKGKKPDVVTYSTLV--------KGLCGV-------GKIDEAVDLLNLLMSKE 404
Query: 388 Y--KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
+ KPD +NL+I + C++ + A +Y MV GF S++ +
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVT 448
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 152/351 (43%), Gaps = 47/351 (13%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEG 156
+M + P + S+LI++ + ++ S A+ + ++ + F L+ C G
Sbjct: 84 KMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSG 143
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ KA + M ++PD V+ YN +I+GLC R+ EA + + M
Sbjct: 144 DSHKAMDLFCMMKRNCLIPDCVS--------YNTVINGLCKGKRLVEAKELFKEMKGGEC 195
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
P++V++ +I GFC+N ++ + + L EM++ + G D Y++LI
Sbjct: 196 KPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG--------------DVFVYSALI 241
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ +C++G++ + L +EM K P+ V S L+N L KK + K+ L D M
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML-----DTMT 296
Query: 337 TSM--PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
P+ + Y L + S N G ++A + D M++ +P+
Sbjct: 297 GCKVRPDVVAYTVLADGLSKN---------------GRASDAIKVLDLMVKRGEEPNNVT 341
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN +I C+ V A + M + G + + L+ L G +E
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDE 392
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ D+ +N +I++ C +R+ + M E+G + ++Y +I G+ + KA
Sbjct: 407 IKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKAL 466
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E + GI P+A TY+ LI LC + LS A LF + + P + TLM +
Sbjct: 467 ELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C E +A ++ +M + PD V ++N II G G VE A +L M
Sbjct: 527 CRESSVEQARNLFQEMRNANHDPDVV--------SFNIIIDGTLKAGDVESAKELLLEML 578
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
M L PD +++ I+I+ F + +L +A L +R V G + D +
Sbjct: 579 NMNLVPDNITFSILINRFLKLGQLDEAASL---YERMVSCG-----------HVPDAVLF 624
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
SL+ Y +G+ KV+++ +M+ K + DS + S ++
Sbjct: 625 DSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
+ + + ++ YN ++ C VE+ + + M PD +S+ +I G
Sbjct: 507 KRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGD 566
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTT 147
A E LEM ++PD T+S LI +L EA L++ M+S PD + F +
Sbjct: 567 VESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDS 626
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
L+ L+G+ K M QM K V+ D
Sbjct: 627 LLKGYSLKGKTEKVVSMLQQMADKDVVLD 655
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 54/418 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ Q + +Y +I C + + +LR + K + P+ + Y +I G C ++
Sbjct: 163 AQGFQLNQVSYGALINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVN 222
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
A+ EM K I PD TY++LI C +L +A L +M+ P+ T + L+
Sbjct: 223 DAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILV 282
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C +G+ +A + ++ GV P+ V TYN++I G C + +V +A IL
Sbjct: 283 DAFCKDGKPKEAKAVVAVLMKNGVKPNVV--------TYNSLIDGYCLVKQVNKAEVILN 334
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGL-- 266
M + G+ D SY I+I+GFC+ + + +A +L EM R++V D +TY+ L+ GL
Sbjct: 335 TMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVP--DTITYSSLIDGLCK 392
Query: 267 --------------SDED------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
SD TY SL+NA C + K + L + +G P
Sbjct: 393 SGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCT 452
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
++LI GL R KD + +++ L+ N + + +++
Sbjct: 453 YTILIKGLCMSGRLKDAQ------------------VVFQDLLIKGYNLDVYTYTAMIRG 494
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
F GL +EA M + P+ Y ++I ++ A + EM+R G +
Sbjct: 495 FCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKKDENDMAEKLLREMIRRGLL 552
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 207/481 (43%), Gaps = 70/481 (14%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
+ +T + R M NGV +L T + +I C + + +
Sbjct: 79 NHYTTAVSLHRKMELNGVA-------------SNLITMSILINCFCHLGQNPLSFSVFAK 125
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ + G P+ + +I G C +A F ++ +G + +Y +LI LC
Sbjct: 126 ILKMGYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLCKVGE 185
Query: 126 LSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
A L + + + P+ + +T ++ C + + AF+++ +MI K + PD V
Sbjct: 186 TRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVV---- 241
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
TYN +I G C +G++++A+G+L M ++P+ + I++ FC++ + ++A +
Sbjct: 242 ----TYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAV 297
Query: 243 KVEMDRKVVWGLDEVTYAYLMQG----------------------LSDEDTYASLINAYC 280
+ + V + VTY L+ G ++D +Y+ +IN +C
Sbjct: 298 VAVLMKNGVKP-NVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFC 356
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
+ + + L EM + +PD++ S LI+GL K R D L+ ++D P
Sbjct: 357 KIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDA-WELVSEMSD--RGQQP 413
Query: 341 NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG----LVNEAARAHDTMLEGNYKPDGAVY 395
N I Y++L+ C N+ + L++ F +G L + G K V+
Sbjct: 414 NIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVF 473
Query: 396 NLLIFDHCRRLNVHKAYNM----YMEMVRYGFVSHMF-SVLALLTALRDHG-MYNERSWV 449
L+ K YN+ Y M+R +F LALL+ ++D+G M N +++
Sbjct: 474 QDLLI---------KGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYE 524
Query: 450 I 450
I
Sbjct: 525 I 525
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 158/378 (41%), Gaps = 61/378 (16%)
Query: 107 LPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFH 163
+P F + ++ +L + A L ++M + IT + L++ C G+ +F
Sbjct: 62 IPPIFHFGVMLGSLVKANHYTTAVSLHRKMELNGVASNLITMSILINCFCHLGQNPLSFS 121
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ +++ G+ P + II GLC G V EAL + G + VSY
Sbjct: 122 VFAKILK--------MGYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSY 173
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------------- 266
+I+G C+ E R A EL +D K+V + V Y ++ G+
Sbjct: 174 GALINGLCKVGETRAALELLRRVDGKIVQP-NVVMYTMIIDGMCKDKLVNDAFNLYSEMI 232
Query: 267 -----SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
D TY +LI+ +C G+L + L +M + P+ S+L++ K + K
Sbjct: 233 AKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPK 292
Query: 322 DTKAHLLLIIADYMYTSM-PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+ KA ++A M + PN + Y++LI+ C + ++ + + RG++ + ++
Sbjct: 293 EAKA----VVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIAD-VQS 347
Query: 380 HDTMLEGNYK--------------------PDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ M+ G K PD Y+ LI C+ + A+ + EM
Sbjct: 348 YSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMS 407
Query: 420 RYGFVSHMFSVLALLTAL 437
G ++ + +LL AL
Sbjct: 408 DRGQQPNIITYNSLLNAL 425
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 173/388 (44%), Gaps = 52/388 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D Y +I C + + +LR + + P+ + Y +I G C ++ A++
Sbjct: 186 QLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFD 245
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
EM KGI P+ TYS+LI + +L +A LF +M+ PD TF L+ C
Sbjct: 246 LYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFC 305
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G+ + + M+ +G+ P+ V TY +++ G C + V +A IL M +
Sbjct: 306 KDGKMKEGKTVFAMMMKQGIKPNVV--------TYCSLMDGYCLVKEVNKAKSILYTMSQ 357
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------- 266
G++PD SY I+I GFC+ +++ +A L EM K + D VTY L+ GL
Sbjct: 358 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIP-DVVTYNSLIDGLCKLGKIS 416
Query: 267 ---------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D TY+S+++A C ++ K + L ++ +G P+ ++LI
Sbjct: 417 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 476
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+GL K R +D I++ L+ N + ++ F +G
Sbjct: 477 DGLCKGGRLEDAHN------------------IFEDLLVKGYNITVNTYTVMIHGFCNKG 518
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLI 399
L +EA M + + PD Y ++I
Sbjct: 519 LFDEALTLLSKMKDNSCIPDAVTYEIII 546
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 151/295 (51%), Gaps = 26/295 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I+ D+ T+N ++ C ++++G + M ++G+ P+ ++Y ++ G+C + K
Sbjct: 288 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 347
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q+G+ PD +Y+ LI C +++ EA +LF+EM PD +T+ +L+
Sbjct: 348 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 407
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G+ S A + +M +GV PD + TY++I+ LC +V++A+ +L
Sbjct: 408 GLCKLGKISYALKLVDEMHDRGVPPDII--------TYSSILDALCKNHQVDKAIALLTK 459
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ + G+ P+ +Y I+I G C+ L A+ + ++ +V G + +
Sbjct: 460 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL---LVKGYNITV-----------N 505
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL-DKKARTKDTK 324
TY +I+ +C +G + LTL +M +PD+V ++I L DK K K
Sbjct: 506 TYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK 560
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 45/351 (12%)
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
+P A+ + ++ ++ +M+ +GI PD FT++ LI C + A+
Sbjct: 81 TPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFTFNILINCFCQLGLIPFAFS 140
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+F ++L P+ ITFTTL+ CL+G+ +A H ++ GF Y
Sbjct: 141 VFAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVV--------AMGFQLDQVGY 192
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+IHGLC +G AL +LR + + P+ V Y +I G C+++ + A++L EM
Sbjct: 193 GTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVS 252
Query: 249 KVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
K G+S + TY++LI+ + G+L + L ++M + PD
Sbjct: 253 K---------------GISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 297
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
++L++G K + K+ K +++ + PN + Y CS L+ +
Sbjct: 298 NILVDGFCKDGKMKEGKTVFAMMMKQGI---KPNVVTY------CS---------LMDGY 339
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ VN+A TM + PD YN+LI C+ V +A N++ EM
Sbjct: 340 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 390
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ + D+ +YN +I C +++V++ + + + M K + PD ++Y +I G C +
Sbjct: 356 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLC--KLG 413
Query: 92 GKAYEFKL--EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFT 146
+Y KL EM +G+ PD TYSS++ ALC ++ +A L ++ P+ T+T
Sbjct: 414 KISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYT 473
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
L+ C G A ++ ++ V G++ + TY +IHG C G +EAL
Sbjct: 474 ILIDGLCKGGRLEDAHNIFEDLL--------VKGYNITVNTYTVMIHGFCNKGLFDEALT 525
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+L M + PDAV+Y I+I E KA +L+ + R
Sbjct: 526 LLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 567
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 197/472 (41%), Gaps = 105/472 (22%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+NKI+ + + + + M +G++PD ++ +I FC A+ ++
Sbjct: 87 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFTFNILINCFCQLGLIPFAFSVFAKIL 146
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE----MLSPPDDITFTTLMHACCLEGE- 157
+ G P+ T+++LI+ LC K ++ +A LF + M D + + TL+H C GE
Sbjct: 147 RMGYHPNTITFTTLIKGLCLKGQIHQAL-LFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 205
Query: 158 ----------------------------------FSKAFHMHHQMIHKGVLPDFVT---- 179
+ AF ++ +M+ KG+ P+ VT
Sbjct: 206 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 265
Query: 180 --GF---------------------SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
GF P ++T+N ++ G C G+++E + M + G+
Sbjct: 266 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 325
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
P+ V+Y ++ G+C +E+ KA + M ++ V D +Y LI
Sbjct: 326 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVN--------------PDIQSYNILI 371
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ +C ++ + + L EM HK +PD V + LI+GL K K L + D M+
Sbjct: 372 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLG-----KISYALKLVDEMH 426
Query: 337 TS--MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
P+ I Y ++++ C N++ + L+ +G+ +P+
Sbjct: 427 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI----------------RPNMY 470
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
Y +LI C+ + A+N++ +++ G+ + + ++ + G+++E
Sbjct: 471 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 522
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D+ TY+ I+ C +V+K + +L + ++G+ P+ +Y +I G C A+
Sbjct: 430 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 489
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
++ KG TY+ +I C+K EA L +M PD +T+ ++ +
Sbjct: 490 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAVTYEIIIRSL 549
Query: 153 CLEGEFSKAFHMHHQMIHKGVL 174
+ E KA + +MI +G+L
Sbjct: 550 FDKDENDKAEKL-REMITRGLL 570
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 177/406 (43%), Gaps = 42/406 (10%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K + DA+ Y +I C ++ A++
Sbjct: 6 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLY 65
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
EM K I P+ TYS+LI C +L +A LF +M+ P+ TF+ L+ C E
Sbjct: 66 SEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKE 125
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A ++ M+ +G+ PD V TY++++ G C + V +A I M G
Sbjct: 126 GRVKEAKNVLAMMMKQGIKPDVV--------TYSSLMDGYCLVNEVNKAESIFNTMSHRG 177
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++ + SY I+I+GFC+ + + +A +L EM K ++ D TY++L
Sbjct: 178 VTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIF--------------PDVITYSAL 223
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I+ C G + L L DEM +G PD + + +++ L KK A L + +
Sbjct: 224 IDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGI 283
Query: 336 YTSMPNYII-----------------YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
M Y I ++ L+ N + + +++ F +GL +EA
Sbjct: 284 RPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 343
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
M E PD Y ++I + A + EM+ G +
Sbjct: 344 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 389
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 188/405 (46%), Gaps = 49/405 (12%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G D +SY +I G C A E +D K + DA YSS+I ++C + +++A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDA 61
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+ L+ EM + P+ +T++ L+ C+ G+ A + ++MI + + +P ++
Sbjct: 62 FDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENI--------NPNVY 113
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
T++ ++ G C GRV+EA +L M + G+ PD V+Y ++ G+C E+ KA + M
Sbjct: 114 TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 173
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+ V ++ +Y+ +IN +C + + + L EM HK PD +
Sbjct: 174 SHRGVT--------------ANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 219
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIEN-CSNNEFKSVVGL 363
S LI+GL K R L + D M+ P+ I Y+++++ C + + L
Sbjct: 220 YSALIDGLCKSGRIS-----YALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIAL 274
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+ +G+ +PD Y +L+ CR + A ++ +++ G+
Sbjct: 275 LTKLKGQGI----------------RPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGY 318
Query: 424 VSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
+++ ++ D G+++E ++ + + D++ ++++
Sbjct: 319 NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 363
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+I ++ T++ ++ C RV++ +L M ++G+ PD ++Y ++ G+C K
Sbjct: 106 ENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNK 165
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M +G+ + +YS +I C + + EA LF+EM PD IT++ L+
Sbjct: 166 AESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALID 225
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G S A + +M +G PD + TYN+I+ LC V++A+ +L
Sbjct: 226 GLCKSGRISYALELVDEMHDRGQQPDII--------TYNSILDALCKKHHVDKAIALLTK 277
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ G+ PD +Y I++ G C++ +L A RKV L L++G + D
Sbjct: 278 LKGQGIRPDMNTYTILVKGLCRSGKLEDA--------RKVFEDL-------LVKGYNLDV 322
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
Y +I +C +G + L L +M G +PD+ ++I L +K
Sbjct: 323 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 370
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 18/254 (7%)
Query: 26 RFTAARN------SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R A+N + I+ D+ TY+ ++ +CL+ V K I M+ +G++ + SY
Sbjct: 127 RVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYS 186
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-- 137
+I GFC + +A + EM K I PD TYS+LI LC R+S A L EM
Sbjct: 187 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDR 246
Query: 138 -SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
PD IT+ +++ A C + KA + ++ +G+ PD + TY ++ GLC
Sbjct: 247 GQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPD--------MNTYTILVKGLC 298
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G++E+A + + G + D +Y ++I GFC +A L +M+ D
Sbjct: 299 RSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP-DA 357
Query: 257 VTYAYLMQGLSDED 270
TY ++ L ++D
Sbjct: 358 KTYEIIILSLFEKD 371
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 188/434 (43%), Gaps = 69/434 (15%)
Query: 3 LLRDSFTATLKTFRHMVRNGVVCRFTAARNSESI--------QQDLATYNKIIKQHCLMQ 54
+L+ ++ TF ++ NG+ + R E + + D+ TY +I C M
Sbjct: 153 MLKLGLEPSVVTFTILI-NGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMG 211
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+ + VG LR M E+ +P+ + Y V+ G C + +A LEM KGI P+ TY+
Sbjct: 212 KTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYT 271
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
LIQ LC+ R EA L EM+ PD + L+ C EG+ +A + MI
Sbjct: 272 CLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILV 331
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
G +PD +FTYN++I C +++EA + M G PD V+Y +I G+C
Sbjct: 332 GEVPD--------VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWC 383
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
+ + + KA L EM KV + D V T+ +LI +C G L
Sbjct: 384 KIKNINKAMHLLDEM-IKVGFTPDVV-------------TWTTLIGGFCQVGRPLAAKEL 429
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP------NYIIY 345
M G +P+ +++++GL K LL A ++ +M N +IY
Sbjct: 430 FLNMHKYGQVPNLQTCAIILDGLCKSQ---------LLSEALSLFHAMEKSNLDLNIVIY 480
Query: 346 DTLIEN-CSNNEFKSVVGL-------------------VKSFSMRGLVNEAARAHDTMLE 385
+++ CS + + + L + F+ +GL+++A M E
Sbjct: 481 SIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEE 540
Query: 386 GNYKPDGAVYNLLI 399
PD YN+ +
Sbjct: 541 NGCMPDSCTYNVFV 554
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 28/321 (8%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S I+ D N +I C ++ V G +L M + GL P +++ +I G C
Sbjct: 119 SSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDV 178
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
G+A E +++ G D TY LI LC + SEA ++M P+ + ++T+
Sbjct: 179 GRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTV 238
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
M C +G S+A + +M KG+ P+ V TY +I GLC GR +EA +L
Sbjct: 239 MDGLCKDGLVSEALGLCLEMSGKGIKPNLV--------TYTCLIQGLCNFGRWKEAGSLL 290
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M +MG+ PD S I++ C+ ++ +A + + + L+ + D
Sbjct: 291 DEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV--------------IGFMILVGEVPD 336
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
TY SLI+ YC Q ++ + + + M +G LPD V + LI+G K + + HLL
Sbjct: 337 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGW-CKIKNINKAMHLL 395
Query: 329 LIIADYMYTSMPNYIIYDTLI 349
+ +T P+ + + TLI
Sbjct: 396 DEMIKVGFT--PDVVTWTTLI 414
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 48/388 (12%)
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQK-GILPDAF 111
++ +++ + MA+ P + + ++ + A EM GI PD F
Sbjct: 69 LKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTF 128
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+ +I +LC + ++ + + ML P +TFT L++ C++G+ +A
Sbjct: 129 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE----- 183
Query: 169 IHKGVLPDFV--TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
L D V TG+ + TY +I+GLC +G+ EA+G LR M E +P+ V Y V
Sbjct: 184 -----LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTV 238
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
+ G C++ + +A L +EM K + + VTY L+QGL C G
Sbjct: 239 MDGLCKDGLVSEALGLCLEMSGKGI-KPNLVTYTCLIQGL-------------CNFGRWK 284
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYD 346
+ +L DEM G +PD ++L++ L K+ + K+ + +I + +P+ Y+
Sbjct: 285 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI---LVGEVPDVFTYN 341
Query: 347 TLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
+LI+ + ++ ++EA R + M+ PD Y LI C+
Sbjct: 342 SLIDR---------------YCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIK 386
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALL 434
N++KA ++ EM++ GF + + L+
Sbjct: 387 NINKAMHLLDEMIKVGFTPDVVTWTTLI 414
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 12/232 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ Y +I C ++ + K + +L M + G +PD +++ +I GFC P A E
Sbjct: 371 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 430
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD---ITFTTLMHACCLE 155
L M + G +P+ T + ++ LC + LSEA LF M D + ++ ++ C
Sbjct: 431 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 490
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ + A + + KG+ + ++ Y +I+G G +++A +L M E G
Sbjct: 491 GKLNTALELFSCLPAKGLQIN--------VYAYTIMINGFAKQGLLDKAEDLLSNMEENG 542
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
PD+ +Y + + G RE+ ++ + + M R + +D T ++ LS
Sbjct: 543 CMPDSCTYNVFVQGLVAEREIARSIKY-LTMMRDKGFSVDATTTEMIINYLS 593
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 121/330 (36%), Gaps = 77/330 (23%)
Query: 124 RRLSEAYHLFQEM--LSP-PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+ + EA + F M ++P P I FT L+ ++ A + +M H + G
Sbjct: 70 KSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEM-HSSL------G 122
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P F N +I+ LC L V +L M ++GL P V
Sbjct: 123 IKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVV------------------- 163
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
T+ LIN C +G++ + + L D + G
Sbjct: 164 ------------------------------TFTILINGLCVKGDVGRAVELVDHVEKTGY 193
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSV 360
D +LINGL K +T + L + + + PN ++Y T+++
Sbjct: 194 RSDVKTYGVLINGLCKMGKTSEA-VGWLRKMEERNWN--PNVVVYSTVMD---------- 240
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
GL K GLV+EA M KP+ Y LI C +A ++ EM++
Sbjct: 241 -GLCKD----GLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 295
Query: 421 YGFVSHMFSVLALLTALRDHGMYNERSWVI 450
G + + S+ L+ L G + VI
Sbjct: 296 MGVMPDLQSLNILVDVLCKEGKIMQAKSVI 325
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 177/408 (43%), Gaps = 57/408 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR K + PD + Y +I G C ++ A++
Sbjct: 172 DQVSYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLY 231
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEF 158
EM K I P+ TYS+LI C +L +A+ F +M+ L+ C EG
Sbjct: 232 SEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMI--------FILVDGFCKEGRV 283
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A ++ M+ +G+ PD V TY++++ G C + V +A I M G++
Sbjct: 284 KEAKNVLAMMMKQGIKPDVV--------TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTA 335
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED-------- 270
+A SY I+I+GFC+ + + +A +L EM K ++ D +TY+ L+ GL
Sbjct: 336 NAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYSALIDGLCKSGRISYALQL 394
Query: 271 --------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
TY S+++A C ++ K + L + +G P ++LI+GL K
Sbjct: 395 VDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCK 454
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
R KD + I++ L+ N + +++ F GL++E+
Sbjct: 455 GGRLKDARN------------------IFEDLLVKGYNITVNTYTVMIQGFCSHGLLDES 496
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
M E PD Y ++I + KA + EM+ G +
Sbjct: 497 LALLSKMEENGCIPDAVTYEIIICSLFDKDKNDKAEKLLREMITRGLL 544
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 12/240 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY+ ++ +CL+ V K I M+ +G++ +A SY +I GFC + +
Sbjct: 296 QGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDE 355
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + EM K I PD TYS+LI LC R+S A L +M P+ +T+ +++
Sbjct: 356 AMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILD 415
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + + +G+ P+++TY +I GLC GR+++A I
Sbjct: 416 ALCKTHQVDKAIALLTKFKDQGI--------QPSVYTYTILIDGLCKGGRLKDARNIFED 467
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G + +Y ++I GFC + L ++ L +M+ D VTY ++ L D+D
Sbjct: 468 LLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIP-DAVTYEIIICSLFDKD 526
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 178/441 (40%), Gaps = 78/441 (17%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
R + K +P + + +++ N+ P +M+ GI D T S LI + C
Sbjct: 57 RLLHHKNPTPHIIQFNKILSSLVKLNQYP-TVVSLHPQMELNGIASDLVTCSILINSFCQ 115
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
+ A+ + ++L PD ITFTTL+ CL+G+ +A H H ++I
Sbjct: 116 LGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVI--------AM 167
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF +Y +I+GLC +G AL +LR + PD V Y +I G C+++ + A
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDA 227
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGL--------------------------------- 266
++L EM K + + VTY+ L+ G
Sbjct: 228 FDLYSEMVAKRISP-NVVTYSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEGRVKEA 286
Query: 267 -------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
D TY+SL++ YC E+ K ++ + MSH+G ++ S++ING
Sbjct: 287 KNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMING 346
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
+ K + L + P+ I Y LI+ GL KS G +
Sbjct: 347 F---CKIKMVDEAMKLFKEMHHKQIFPDVITYSALID-----------GLCKS----GRI 388
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLAL 433
+ A + D M + P+ YN ++ C+ V KA + + G +++ L
Sbjct: 389 SYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTIL 448
Query: 434 LTALRDHGMYNERSWVIQNTL 454
+ L G + + ++ L
Sbjct: 449 IDGLCKGGRLKDARNIFEDLL 469
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ + TY +I C R++ I + KG + +Y +I GFC++ +
Sbjct: 436 QGIQPSVYTYTILIDGLCKGGRLKDARNIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDE 495
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
+ +M++ G +PDA TY +I +L K + +A L +EM++
Sbjct: 496 SLALLSKMEENGCIPDAVTYEIIICSLFDKDKNDKAEKLLREMIT 540
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 182/417 (43%), Gaps = 64/417 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ TYN ++K + +V + + M KG++P +SY +I G C C KAY
Sbjct: 428 NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSML 487
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
+ ++G+ P+A TY+ LI K A+ +F++M++ P D TF T+++
Sbjct: 488 KSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKT 547
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G S+ + I + GF TYN+II G G V+ AL R M E G
Sbjct: 548 GRVSETQDKLNNFIKQ--------GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--------- 266
+SPD ++Y +I G C++ ++ A E+ +M K + LD V Y+ L+ G
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGM-KLDVVAYSALIDGFCKMHDMESA 658
Query: 267 -------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+ Y S+I+ + + L L EM D + + +I G
Sbjct: 659 SKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGG 718
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSF 367
L K+ + L +A +Y+ M P+ ++Y LI SNN
Sbjct: 719 LLKEGK---------LSLALDLYSEMLSKDIVPDIVMYTVLINGLSNN------------ 757
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
G + A++ M N P VYN+LI + R N+ +A+ ++ EM+ G V
Sbjct: 758 ---GQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 174/431 (40%), Gaps = 78/431 (18%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++ LK + + C S+ I L +YN +I HC ++K +L+ +
Sbjct: 431 TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
E+GL P+A++Y +I GF +A+ +M I P T++++I L R+
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550
Query: 127 SE--------------------------------------AYHLFQEMLSPPDDITFTTL 148
SE AY E PD IT+T+L
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSL 610
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C + A MH M +KG+ D V Y+A+I G C + +E A
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKYKGMKLDVV--------AYSALIDGFCKMHDMESASKFF 662
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ ++GL+P+ V Y +ISGF + A L EM + V D
Sbjct: 663 TELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVP--------------CD 708
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
Y S+I +G+L L L EM K +PD V+ ++LINGL + ++ L
Sbjct: 709 LQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK 768
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+ + + P+ ++Y+ LI F+ G + EA R HD ML+
Sbjct: 769 EMDGNNI---TPSVLVYNILIA----GNFR-----------EGNLQEAFRLHDEMLDKGL 810
Query: 389 KPDGAVYNLLI 399
PD Y++L+
Sbjct: 811 VPDDTTYDILV 821
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 184/413 (44%), Gaps = 53/413 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + ++ ++K +C++ V + + + E G+ PD + + +I G
Sbjct: 318 SVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDME 377
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML--SPPDDITFTTLMH 150
KAYE M GI P+ F +SL++ + L AY LF E + + +T+ L+
Sbjct: 378 KAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLK 437
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G+ ++A ++ +M+ KG+ +P+L +YN +I G C G +++A +L+
Sbjct: 438 WLGELGKVNEACNLWEKMVSKGI--------TPSLVSYNNLILGHCKKGCMDKAYSMLKS 489
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-----------RKVVWGLDEVTY 259
+ E GL P+AV+Y ++I GF + + +A+ + +M V+ GL +
Sbjct: 490 ILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGR 549
Query: 260 A---------YLMQG-LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
++ QG +S TY S+I+ + +G + L EM G PD + +
Sbjct: 550 VSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTS 609
Query: 310 LINGLDKKARTKDTKAHLLLII-ADYMYTSMP-NYIIYDTLIENCSNNEFKSVVGLVKSF 367
LI+GL K K L L + +D Y M + + Y LI+ G K
Sbjct: 610 LIDGL-----CKSNKIGLALEMHSDMKYKGMKLDVVAYSALID-----------GFCKMH 653
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
M A++ +L+ P+ VYN +I N+ A N++ EM++
Sbjct: 654 DMES----ASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK 702
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 25/282 (8%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TYN II V+ + R M E G+SPD ++Y +I G C + G A E +M
Sbjct: 571 TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDM 630
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
KG+ D YS+LI C + A F E+L P+ + + +++
Sbjct: 631 KYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNM 690
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A ++H +MI V D L Y +II GL G++ AL + M + P
Sbjct: 691 EAALNLHQEMIKNKVPCD--------LQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVP 742
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
D V Y ++I+G N +L A ++ EMD + +T + L+ Y LI
Sbjct: 743 DIVMYTVLINGLSNNGQLENASKILKEMDG------NNITPSVLV--------YNILIAG 788
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+G L + L DEM KG +PD +L+NG K + T
Sbjct: 789 NFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 169/436 (38%), Gaps = 91/436 (20%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M E+G+ D + V+ + +F E +G+ DA YS L+QA+C +
Sbjct: 211 MVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLD 270
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L+ A L +EM P T+T ++ AC +G F +A + +M+ G
Sbjct: 271 LNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS--------VGLP 322
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ +++ G C LG V AL + + E G+ PD V + ++I+G + ++ KAYEL
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYEL 382
Query: 243 KVEM--------------------------------DRKVVWGL-DEVTYAYLMQGLSDE 269
M D V G+ + VTY L++ L +
Sbjct: 383 YTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGEL 442
Query: 270 D----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
+Y +LI +C +G + K ++ + +G P++V
Sbjct: 443 GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTY 502
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCS------------N 354
+LLI+G KK ++ ++ M ++ P ++T+I N
Sbjct: 503 TLLIDGFFKKGDSE----RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLN 558
Query: 355 NEFK--------SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
N K + ++ F G V+ A A+ M E PD Y LI C+
Sbjct: 559 NFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618
Query: 407 NVHKAYNMYMEMVRYG 422
+ A M+ +M G
Sbjct: 619 KIGLALEMHSDMKYKG 634
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 30/224 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D+ TY +I C ++ + + M KG+ D ++Y +I GFC A
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+F E+ G+ P+ Y+S+I + A +L QEM+ P D +T+++
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFV---------------------------TGFSPAL 185
EG+ S A ++ +M+ K ++PD V +P++
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSV 779
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
YN +I G G ++EA + M + GL PD +Y I+++G
Sbjct: 780 LVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 195/437 (44%), Gaps = 48/437 (10%)
Query: 2 KLLRDSFTATLKTFRHMVR----NGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQ 54
K+L+ F + TF +++ NG V F S D +Y +I C M
Sbjct: 10 KILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMG 69
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+ + + +LR + K ++ D + Y +I C ++ +AY EM K I PD T+S
Sbjct: 70 KTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFS 129
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
+LI C +L EA+ LF EM+ PD TF L+ A C EG +A ++ M+ +
Sbjct: 130 ALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKE 189
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV+PD V TY +++ G C + +V +A +L + MGL+P+A SY I+I+GFC
Sbjct: 190 GVIPDVV--------TYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFC 241
Query: 232 QNRELRKAYELKVEMDRKVVWG---LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
+ + + +A L EM + + D +A ++ TY S ++A C ++ K
Sbjct: 242 KIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVI-------TYNSFLHALCKNHQVDKA 294
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL-LIIADYMYTSMPNYIIYDT 347
+ ++ G P ++LI+GL K+ R ++ + L+I Y T I
Sbjct: 295 IAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWTYNI---- 350
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
++ + GL ++A + M E PD Y +I +
Sbjct: 351 ---------------MINGLCLEGLFDQAMILLEKMEENGCIPDVVTYETIIRALFKNDE 395
Query: 408 VHKAYNMYMEMVRYGFV 424
+A + EM+ G +
Sbjct: 396 NDRAEKLLREMIARGLL 412
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 189/420 (45%), Gaps = 72/420 (17%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D+ T+N +IK C+ +V++ + + G D +SY +I G C +A +
Sbjct: 17 QPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGKTTEALQ 76
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
++D K + D YS++I +LC + ++EAY L+ EM++ PD +TF+ L++ C
Sbjct: 77 VLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFSALIYGFC 136
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+ +AF + H+M+ K + PD ++T+N ++ C G +EA ++ M +
Sbjct: 137 IVGQLKEAFGLFHEMVLKNINPD--------VYTFNILVDAFCKEGNTKEAKNVIAMMMK 188
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTY 272
G+ PD V+Y ++ G+C ++ KA + + R GL+ + ++Y
Sbjct: 189 EGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISR---------------MGLTPNANSY 233
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+IN +C + + L L +EM +G PD + D H
Sbjct: 234 NIIINGFCKIKMVDEALNLFNEMCCRGIAPD---------------KMHDRGQH------ 272
Query: 333 DYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
N I Y++ + C N++ + VK G+ +P
Sbjct: 273 -------ANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGI----------------QPY 309
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
YN+LI C+ + + A ++ +++ G+ +++ ++ L G++++ +++
Sbjct: 310 INTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDQAMILLE 369
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 43/297 (14%)
Query: 129 AYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
A+ LF ++L PD ITF TL+ C+ G+ +A H H +I GF
Sbjct: 4 AFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVIS--------LGFHLDQ 55
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+Y +I+GLC +G+ EAL +LR + ++ D V Y +I C+++ + +AY L E
Sbjct: 56 VSYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSE 115
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
M K + D T+++LI +C G+L + L EM K PD
Sbjct: 116 MITKRIS--------------PDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVY 161
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
++L++ K+ TK+ K + +++ + + +P+ + Y +L++
Sbjct: 162 TFNILVDAFCKEGNTKEAKNVIAMMMKEGV---IPDVVTYGSLMD--------------- 203
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+ + VN+A + P+ YN++I C+ V +A N++ EM G
Sbjct: 204 GYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRG 260
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 161/353 (45%), Gaps = 54/353 (15%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R+ +A D AT+ II + C + + R + + GL P+ +++ +I G
Sbjct: 184 RWLSAMLERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGL 243
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PD 141
C +A+E EM KG P+ +T++SLI LC K +A+ LF +++ P+
Sbjct: 244 CKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPN 303
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------- 179
+T+T ++ C E + ++A + +M +G++P+ T
Sbjct: 304 VLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMN 363
Query: 180 -----GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
GFSP + TYNAI++GLC GRV+EA +L + GL PD +Y I++S C+
Sbjct: 364 LMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQA 423
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TY 272
+R+A L +M + + D +Y L+ E+ TY
Sbjct: 424 NIRQALVLFNKMVKSGIQP-DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTY 482
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
S+I YC +G L + +S G PDS+ +I+GL K+++ + +
Sbjct: 483 TSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKLDEARG 535
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 50/390 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T N IIK M VE + M +G+ PD++SYR ++ +C +A + M
Sbjct: 130 TLNLIIKVTSEMGLVEYAELLFEEMCVRGVQPDSVSYRVMVVMYCKIGNILEADRWLSAM 189
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
++G + D T++ +I C K + A F+ ++ P+ I FT ++ C G
Sbjct: 190 LERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSI 249
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI-LRGMPEMGLS 217
+AF M +M+ K G+ P ++T+ ++I GLC G E+A + L+ +
Sbjct: 250 KQAFEMLEEMVGK--------GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHK 301
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLI 276
P+ ++Y +ISG+C+ +L +A L M QGL + +TY +LI
Sbjct: 302 PNVLTYTAMISGYCREDKLNRAEMLLSRMKE---------------QGLVPNTNTYTTLI 346
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ +C G + L + MS +G P+ + ++NGL K+ R ++ ++ D
Sbjct: 347 DGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYK----MLEDGFQ 402
Query: 337 TSM-PNYIIYDTLI-ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ P+ Y+ L+ E+C + + L + M++ +PD
Sbjct: 403 NGLKPDRFTYNILMSEHCKQANIRQALVLF----------------NKMVKSGIQPDIHS 446
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y LI CR + ++ + E VR G +
Sbjct: 447 YTTLIAVFCRENRMKESEMFFEEAVRIGII 476
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 189/446 (42%), Gaps = 47/446 (10%)
Query: 15 FRHMVRNGVVC--RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
FRH +R +VC RNSE + + +++ + R+++ V ++ M +GL
Sbjct: 69 FRHFMRLYIVCATSLIGNRNSEKACEVMRC---MVENFSEVGRLKEAVEMVIEMHNQGLV 125
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
P+ + +I A EM +G+ PD+ +Y ++ C + EA
Sbjct: 126 PNTRTLNLIIKVTSEMGLVEYAELLFEEMCVRGVQPDSVSYRVMVVMYCKIGNILEADRW 185
Query: 133 FQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
ML D+ TFT ++ C +G ++A +++ G P L +
Sbjct: 186 LSAMLERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVD--------MGLEPNLINFT 237
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I GLC G +++A +L M G P+ ++ +I G C+ KA+ L +++ R
Sbjct: 238 CMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRS 297
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
+ TY ++I+ YC + +L + L M +G +P++ +
Sbjct: 298 -------------ENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTT 344
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
LI+G KA + L+ +++ ++ PN Y+ ++ GL K
Sbjct: 345 LIDG-HCKAGNFERAYDLMNLMSSEGFS--PNVCTYNAIVN-----------GLCK---- 386
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
RG V EA + + + KPD YN+L+ +HC++ N+ +A ++ +MV+ G + S
Sbjct: 387 RGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHS 446
Query: 430 VLALLTALRDHGMYNERSWVIQNTLR 455
L+ E + +R
Sbjct: 447 YTTLIAVFCRENRMKESEMFFEEAVR 472
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+SE ++ TYN I+ C RV++ +L + GL PD +Y +++ C
Sbjct: 366 SSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANI 425
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A +M + GI PD +Y++LI C + R+ E+ F+E + P + T+T++
Sbjct: 426 RQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSM 485
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C EG + A H++ G PD +T Y AII GLC +++EA G+
Sbjct: 486 ICGYCREGNLTLAMKFFHRLSDHGCAPDSIT--------YGAIISGLCKQSKLDEARGLY 537
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQ 232
M E GL P V+ I + +C+
Sbjct: 538 DSMIEKGLVPCEVTRITLAYEYCK 561
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 25/276 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
SE+ + ++ TY +I +C ++ + +L M E+GL P+ +Y +I G C
Sbjct: 297 SENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFE 356
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+AY+ M +G P+ TY++++ LC + R+ EAY + ++ PD T+ LM
Sbjct: 357 RAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILM 416
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C + +A + ++M+ G+ PD + +Y +I C R++E+
Sbjct: 417 SEHCKQANIRQALVLFNKMVKSGIQPD--------IHSYTTLIAVFCRENRMKESEMFFE 468
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+G+ P +Y +I G+C+ L A K L + A D
Sbjct: 469 EAVRIGIIPTNRTYTSMICGYCREGNLTLAM--------KFFHRLSDHGCA------PDS 514
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
TY ++I+ C Q +L + L D M KG +P V
Sbjct: 515 ITYGAIISGLCKQSKLDEARGLYDSMIEKGLVPCEV 550
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 179/401 (44%), Gaps = 52/401 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ + D Y +I C + R +L+ M + + P+ + Y +I FC +
Sbjct: 155 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 214
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
KA + L++ GI PD TY+SLI+ C + E L EM++ P+ TF L+
Sbjct: 215 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 274
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C +G+ +A M + M+ +G PD V T+N +I G C G V EA +
Sbjct: 275 DAFCRKGKMIEAQGMFNLMVKRGQQPDIV--------TFNTLISGHCLHGNVLEARKLFD 326
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ E G+ PD SY I+I G+C+ + + +A L EM K + LD V Y+ L+ GL
Sbjct: 327 TVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV-LDIVLYSSLIDGLCKS 385
Query: 270 D----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
TY LI+A+C ++ + L M KG P +
Sbjct: 386 GRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTY 445
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
++LING K R ++ L ++ + + P+ I Y++L + GL KS
Sbjct: 446 NILINGYCKSKRIREAMNLLSVMQSKNL---APDSITYNSLFD-----------GLCKS- 490
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
G +++A M G D A YN+L+ C+ +V
Sbjct: 491 ---GRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 528
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++T+ ++ F + G V + +++I ++ T+N +I C ++ + G+ M
Sbjct: 234 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 293
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD---QKGILPDAFTYSSLIQALCSK 123
++G PD +++ +I+G C + G E + D ++GILPD ++Y+ LI C
Sbjct: 294 VKRGQQPDIVTFNTLISGHCLH---GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKC 350
Query: 124 RRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+R+ EA LF EM D + +++L+ C G S A+ + + + G P+ +
Sbjct: 351 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVI-- 408
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
TYN +I C + ++ + + + M GL+P ++Y I+I+G+C+++ +R+A
Sbjct: 409 ------TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAM 462
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
L M K + D +TY L GL + +A+ ELFKV+ H G
Sbjct: 463 NLLSVMQSKNL-APDSITYNSLFDGLCKS---GRISDAW----ELFKVM-------HVGG 507
Query: 301 LPDSV 305
P V
Sbjct: 508 PPVDV 512
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 48/342 (14%)
Query: 118 QALCSKRRLSEAYHLFQEMLS--P-PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
+ L S + +A LF +++ P P I F T++ + A + QM+ KGV
Sbjct: 30 KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV- 88
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
+P++FT + I+ C LG + A +L + + G P+ ++ V+ G C N
Sbjct: 89 -------TPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCING 141
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
E++KA + D G+ L DE Y +LIN C G L E
Sbjct: 142 EVQKAMDFH---DNVAAQGM-----------LLDEVCYGTLINGLCKIGRSIDAFQLLQE 187
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CS 353
M + P+ VI +++I+ K T + L L I D P+ + Y +LI C
Sbjct: 188 MEGQVVKPNIVIYNMIIDSFCKDELTCKAR-DLYLKIVDMGID--PDILTYTSLIRGFCR 244
Query: 354 NNEFKSVVGL-------------------VKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
++ V L + +F +G + EA + M++ +PD
Sbjct: 245 TGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVT 304
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
+N LI HC NV +A ++ + G + ++S L+
Sbjct: 305 FNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIG 346
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N++ ++ TYN +I C +Q ++ G+ + + M KGL+P L+Y +I G+C ++
Sbjct: 399 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 458
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML--SPPDDI-TFTTL 148
+A M K + PD+ TY+SL LC R+S+A+ LF+ M PP D+ T+ L
Sbjct: 459 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 518
Query: 149 MHACC 153
+ A C
Sbjct: 519 LDAFC 523
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 179/401 (44%), Gaps = 52/401 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ + D Y +I C + R +L+ M + + P+ + Y +I FC +
Sbjct: 155 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 214
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
KA + L++ GI PD TY+SLI+ C + E L EM++ P+ TF L+
Sbjct: 215 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 274
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C +G+ +A M + M+ +G PD V T+N +I G C G V EA +
Sbjct: 275 DAFCRKGKMIEAQGMFNLMVKRGQQPDIV--------TFNTLISGHCLHGNVLEARKLFD 326
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ E G+ PD SY I+I G+C+ + + +A L EM K + LD V Y+ L+ GL
Sbjct: 327 TVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV-LDIVLYSSLIDGLCKS 385
Query: 270 D----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
TY LI+A+C ++ + L M KG P +
Sbjct: 386 GRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTY 445
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
++LING K R ++ L ++ + + P+ I Y++L + GL KS
Sbjct: 446 NILINGYCKSKRIREAMNLLSVMQSKNL---APDSITYNSLFD-----------GLCKS- 490
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
G +++A M G D A YN+L+ C+ +V
Sbjct: 491 ---GRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 528
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++T+ ++ F + G V + +++I ++ T+N +I C ++ + G+ M
Sbjct: 234 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 293
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD---QKGILPDAFTYSSLIQALCSK 123
++G PD +++ +I+G C + G E + D ++GILPD ++Y+ LI C
Sbjct: 294 VKRGQQPDIVTFNTLISGHCLH---GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKC 350
Query: 124 RRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+R+ EA LF EM D + +++L+ C G S A+ + + + G P+ +
Sbjct: 351 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVI-- 408
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
TYN +I C + ++ + + + M GL+P ++Y I+I+G+C+++ +R+A
Sbjct: 409 ------TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAM 462
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
L M K + D +TY L GL + +A+ ELFKV+ H G
Sbjct: 463 NLLSVMQSKNL-APDSITYNSLFDGLCKS---GRISDAW----ELFKVM-------HVGG 507
Query: 301 LPDSV 305
P V
Sbjct: 508 PPVDV 512
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 48/342 (14%)
Query: 118 QALCSKRRLSEAYHLFQEMLS--P-PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
+ L S + +A LF +++ P P I F T++ + A + QM+ KGV
Sbjct: 30 KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV- 88
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
+P++FT + I+ C LG + A +L + + G P+ ++ V+ G C N
Sbjct: 89 -------TPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCING 141
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
E++KA + D G+ L DE Y +LIN C G L E
Sbjct: 142 EVQKAMDFH---DNVAAQGM-----------LLDEVCYGTLINGLCKIGRSIDAFQLLQE 187
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CS 353
M + P+ VI +++I+ K T + L L I D P+ + Y +LI C
Sbjct: 188 MEGQVVKPNIVIYNMIIDSFCKDELTCKAR-DLYLKIVDMGID--PDILTYTSLIRGFCR 244
Query: 354 NNEFKSVVGL-------------------VKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
++ V L + +F +G + EA + M++ +PD
Sbjct: 245 TGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVT 304
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
+N LI HC NV +A ++ + G + ++S L+
Sbjct: 305 FNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIG 346
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N++ ++ TYN +I C +Q ++ G+ + + M KGL+P L+Y +I G+C ++
Sbjct: 399 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 458
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML--SPPDDI-TFTTL 148
+A M K + PD+ TY+SL LC R+S+A+ LF+ M PP D+ T+ L
Sbjct: 459 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 518
Query: 149 MHACC 153
+ A C
Sbjct: 519 LDAFC 523
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 31/323 (9%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D +Y +I C + + +L+ + EK + D + Y +I G C ++ A++
Sbjct: 165 QLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFD 224
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
EM K + PD FTY+++I C RL +A LF +M D+ TF TL+ A C
Sbjct: 225 LYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFC 284
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG + + M+ +GV PD + TYN+++ G C + V++A I M +
Sbjct: 285 KEGNVREGKAVVAVMMKEGVKPDII--------TYNSLMDGYCLVKEVDKAKNIFNTMVQ 336
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G++ + SY I+I+GFC+ + + +A L EM K + + D Y+
Sbjct: 337 RGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEI--------------IPDTIAYS 382
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
SLI+ +C G + + L L DEM +G P+ + + ++ L K + T A L I
Sbjct: 383 SLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVK 442
Query: 334 ------YMYTSMPNYIIYDTLIE 350
Y YT + N + D +E
Sbjct: 443 GIQPDAYTYTILTNGLFKDGRLE 465
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 20 RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R + F + + I+ DL TYN +I + + + ++G PD +++
Sbjct: 78 RYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFN 137
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--- 136
+I G C KA F ++ D +Y +LI LC A L +E+
Sbjct: 138 TLINGLCLKGEVHKALNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLKEVNEK 197
Query: 137 LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
+ D + +T +++ C + AF ++ +M+ K V PD +FTYNA+I+G C
Sbjct: 198 IVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPD--------VFTYNAMIYGFC 249
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
+GR+++A+G+ M + D ++ ++S FC+ +R+ + M ++ V D
Sbjct: 250 VVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKP-DI 308
Query: 257 VTYAYLMQG----------------------LSDEDTYASLINAYCAQGELFKVLTLDDE 294
+TY LM G ++ +Y+ +IN +C + + + L E
Sbjct: 309 ITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQE 368
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIEN- 351
M K +PD++ S LI+G K R L + D M+ PN I Y++++
Sbjct: 369 MHCKEIIPDTIAYSSLIDGFCKSGRIPQA-----LELVDEMHDRGQPPNIITYNSILYAL 423
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEA 376
C + + + L++ ++G+ +A
Sbjct: 424 CKIHHVEKTIALLRKIKVKGIQPDA 448
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E+++ D T+N ++ C V +G ++ M ++G+ PD ++Y ++ G+C + K
Sbjct: 267 ENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDK 326
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A M Q+G+ + +YS +I C + + EA +LFQEM PD I +++L+
Sbjct: 327 AKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSLID 386
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G +A + +M +G P+ + TYN+I++ LC + VE+ + +LR
Sbjct: 387 GFCKSGRIPQALELVDEMHDRGQPPNII--------TYNSILYALCKIHHVEKTIALLRK 438
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ G+ PDA +Y I+ +G ++ L +A E+
Sbjct: 439 IKVKGIQPDAYTYTILTNGLFKDGRLEEAREI 470
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 27/303 (8%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R N + +Q D+ Y II C + V+ + M K +SPD +Y +I GF
Sbjct: 189 RLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGF 248
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
C A +M + + D +T+++L+ A C + + E + M+ PD
Sbjct: 249 CVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDI 308
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
IT+ +LM CL E KA ++ + M+ +GV + + +Y+ +I+G C + ++
Sbjct: 309 ITYNSLMDGYCLVKEVDKAKNIFNTMVQRGV--------TANVRSYSIMINGFCKVKMMD 360
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAY 261
EA+ + + M + PD ++Y +I GFC++ + +A EL EM DR +
Sbjct: 361 EAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNI------- 413
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
TY S++ A C + K + L ++ KG PD+ ++L NGL K R +
Sbjct: 414 --------ITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLE 465
Query: 322 DTK 324
+ +
Sbjct: 466 EAR 468
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 137/353 (38%), Gaps = 60/353 (16%)
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------ 179
+S L ++ +PP F ++ + L +S A H ++ KG+ PD T
Sbjct: 48 ISRFNRLTNQIPTPPIS-QFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLIN 106
Query: 180 ---------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
G+ P + T+N +I+GLC G V +AL + +
Sbjct: 107 CFSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLKFQL 166
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
D VSY +I+G C+ E R A L E++ K+V Y +M Y ++IN
Sbjct: 167 DRVSYETLINGLCKVGETRAALRLLKEVNEKIVQ------YDVVM--------YTAIING 212
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C + L EM K PD + +I G R KD
Sbjct: 213 LCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIG------------- 259
Query: 339 MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
+ D +EN +E+ + LV +F G V E M++ KPD YN L
Sbjct: 260 ----LFNDMKLENVEADEY-TFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSL 314
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
+ +C V KA N++ MV+ G +++ S ++ M +E + Q
Sbjct: 315 MDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQ 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D Y+ +I C R+ + + ++ M ++G P+ ++Y ++ C K
Sbjct: 372 KEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEK 431
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM 136
++ KGI PDA+TY+ L L RL EA +F ++
Sbjct: 432 TIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 474
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 56/333 (16%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I +L T+N I C ++ K + M G+SP ++Y ++ G+C GK Y
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMY 255
Query: 96 E---FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+ F EM I P+ T+++LI C ++ A F+EM P+ +T+ +L+
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT------GFS--------------------- 182
+ C G+ +A + +M+ G+ P+ VT GF
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELV 375
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + T+N +I C G +EE + M E G+ P+ +Y +I+G C+ ++L+ A EL
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKEL 435
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYC 280
EM+ K + G D VTY L+ GL D TY +L++ YC
Sbjct: 436 LNEMENKGLKG-DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+G+L L + M + P+ V ++LI G
Sbjct: 495 MEGKLKAALNVRKRMEKERKQPNVVTYNVLIKG 527
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 181/389 (46%), Gaps = 53/389 (13%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+ + M ++ + + ++ I G C KA + +M GI P TY++L+ C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYC 246
Query: 122 ---SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
S ++ +A +EML+ P+++TF TL+ C + + A +M +G+ P
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ V TYN++I+GLC G++EEA+ + M +GL P+ V+Y +I+GFC+ +
Sbjct: 307 NIV--------TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 236 LRKAYELKVEMDRKV----VWGLDEVTYAYLMQGLSDE-----------------DTYAS 274
+++A ++ ++ ++ V + + AY +G+ +E TY
Sbjct: 359 MKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKC 418
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI C + +L L +EM +KG D V ++LI+GL K ++++ + L+ +
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK---LLNEMF 475
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
PN++ Y+TL++ + M G + A M + +P+
Sbjct: 476 NLGLKPNHVTYNTLMD---------------GYCMEGKLKAALNVRKRMEKERKQPNVVT 520
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
YN+LI +C+ + A + EM+ G
Sbjct: 521 YNVLIKGYCKINKLEAANGLLNEMLEKGL 549
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 38/325 (11%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
++ A K F M + G ++ ++ TYN +I C ++E+ + +
Sbjct: 287 ENVAAAKKAFEEMQKQG-------------LKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M GL P+ ++Y +I GFC + +A + ++ ++ ++P+ T++++I A C +
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGM 393
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ E + L ML P+ T+ L+ C + + A + ++M +KG+ D V
Sbjct: 394 MEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV---- 449
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
TYN +I GLC + A +L M +GL P+ V+Y ++ G+C +L+ A +
Sbjct: 450 ----TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ M+++ + + TY LI YC +L L +EM KG P
Sbjct: 506 RKRMEKE--------------RKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
Query: 303 DSVIDSLLINGLDKKARTKDTKAHL 327
+ ++ + +K + D + HL
Sbjct: 552 NRTTYDIVRLEMLEKGFSPDIEGHL 576
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 50/314 (15%)
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
L+ A E + +++ +MI + + + L T+N I+GLC G++ +A
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTN--------LNTFNIFINGLCRAGKLNKAEDA 222
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQG 265
+ M G+SP V+Y ++ G+C+ K Y+ + M + + +EVT+ L+ G
Sbjct: 223 IEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282
Query: 266 L-SDED---------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
DE+ TY SLIN C G+L + + L D+M G P+
Sbjct: 283 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGL 363
V + LING KK K+ L + + +PN I ++T+I+
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVLDDVSKQEL---VPNVITFNTMID------------- 386
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
++ G++ E +MLE P+ + Y LI CR+ ++ A + EM G
Sbjct: 387 --AYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGL 444
Query: 424 VSHMFSVLALLTAL 437
+ + L+ L
Sbjct: 445 KGDVVTYNILIDGL 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 107/269 (39%), Gaps = 35/269 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF + + N ++ L ++ + + + M + + + ++ I I+G C+ +L KA
Sbjct: 160 GFKLSQTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG---ELFKVLTLDDEMS 296
+ +M WG+ TY +L++ YC +G +++K EM
Sbjct: 220 EDAIEDMK---AWGISPKVV-----------TYNTLVDGYCKRGSAGKMYKAEAFMKEML 265
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
P+ V + LI+G K K + + PN + Y++LI NN
Sbjct: 266 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGL---KPNIVTYNSLINGLCNN- 321
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
G + EA D M+ KP+ YN LI C++ + +A +
Sbjct: 322 --------------GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLD 367
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNE 445
++ + V ++ + ++ A GM E
Sbjct: 368 DVSKQELVPNVITFNTMIDAYCKEGMMEE 396
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 176/395 (44%), Gaps = 52/395 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y +I C + R +L+ M + + P+ + Y +I FC + KA +
Sbjct: 145 DEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLY 204
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
L++ GI PD TY+SLI+ C + E L EM++ P+ TF L+ A C +
Sbjct: 205 LKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRK 264
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A M + M+ +G PD V T+N +I G C G V EA + + E G
Sbjct: 265 GKMIEAQGMFNLMVKRGQQPDIV--------TFNTLISGHCLHGNVLEARKLFDTVFERG 316
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
+ PD SY I+I G+C+ + + +A L EM K + LD V Y+ L+ GL
Sbjct: 317 ILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV-LDIVLYSSLIDGLCKSGRISYA 375
Query: 271 -----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY LI+A+C ++ + L M KG P + ++LING
Sbjct: 376 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 435
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
K R ++ L ++ + + P+ I Y++L + GL KS G +
Sbjct: 436 YCKSKRIREAMNLLSVMQSKNL---APDSITYNSLFD-----------GLCKS----GRI 477
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
++A M G D A YN+L+ C+ +V
Sbjct: 478 SDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 512
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D+ T+N +I HCL V + + + E+G+ PD SY +I G+C + +A
Sbjct: 283 QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVS 342
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM K ++ D YSSLI LC R+S A+ LF + + PP+ IT+ L+ A C
Sbjct: 343 LFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFC 402
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ + M KG+ +P + TYN +I+G C R+ EA+ +L M
Sbjct: 403 KIQDIDMGIELFKLMCGKGL--------TPTVLTYNILINGYCKSKRIREAMNLLSVMQS 454
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYEL 242
L+PD+++Y + G C++ + A+EL
Sbjct: 455 KNLAPDSITYNSLFDGLCKSGRISDAWEL 483
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++T+ ++ F + G V + +++I ++ T+N +I C ++ + G+ M
Sbjct: 218 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 277
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD---QKGILPDAFTYSSLIQALCSK 123
++G PD +++ +I+G C + G E + D ++GILPD ++Y+ LI C
Sbjct: 278 VKRGQQPDIVTFNTLISGHCLH---GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKC 334
Query: 124 RRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+R+ EA LF EM D + +++L+ C G S A+ + + + G P+ +
Sbjct: 335 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVI-- 392
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
TYN +I C + ++ + + + M GL+P ++Y I+I+G+C+++ +R+A
Sbjct: 393 ------TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAM 446
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
L M K + D +TY L GL + +A+ ELFKV+ H G
Sbjct: 447 NLLSVMQSKNL-APDSITYNSLFDGLCKS---GRISDAW----ELFKVM-------HVGG 491
Query: 301 LPDSV 305
P V
Sbjct: 492 PPVDV 496
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N++ ++ TYN +I C +Q ++ G+ + + M KGL+P L+Y +I G+C ++
Sbjct: 383 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 442
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDI-TFTTL 148
+A M K + PD+ TY+SL LC R+S+A+ LF+ M PP D+ T+ L
Sbjct: 443 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 502
Query: 149 MHACC 153
+ A C
Sbjct: 503 LDAFC 507
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
I D+ +Y +I +C +R+++ V + M K + D + Y +I G C +
Sbjct: 315 RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISY 374
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A+E ++ G P+ TY+ LI A C + + LF+ M P +T+ L++
Sbjct: 375 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 434
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +A ++ M K + PD + TYN++ GLC GR+ +A + +
Sbjct: 435 GYCKSKRIREAMNLLSVMQSKNLAPDSI--------TYNSLFDGLCKSGRISDAWELFKV 486
Query: 211 MPEMGLSPDAVSYIIVISGFCQNREL 236
M G D +Y +++ FC+ +++
Sbjct: 487 MHVGGPPVDVATYNVLLDAFCKAQDV 512
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 45/317 (14%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P I F T++ + A + QM+ KGV +P++FT + I+ C LG
Sbjct: 39 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV--------TPSIFTLSIWINCYCHLG 90
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+ A +L + + G P+ ++ V+ G C N E++KA + D G+
Sbjct: 91 EMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH---DNVAAQGM----- 142
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
L DE Y +LIN C G L EM + P+ VI +++I+ K
Sbjct: 143 ------LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDEL 196
Query: 320 TKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGL--------------- 363
T + L L I D P+ + Y +LI C ++ V L
Sbjct: 197 TCKAR-DLYLKIVDMGID--PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYT 253
Query: 364 ----VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ +F +G + EA + M++ +PD +N LI HC NV +A ++ +
Sbjct: 254 FNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVF 313
Query: 420 RYGFVSHMFSVLALLTA 436
G + ++S L+
Sbjct: 314 ERGILPDVWSYTILIIG 330
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 54/340 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D AT+ II + + + R + + GL P+ +++ +I G C +A+E
Sbjct: 179 DNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEML 238
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCL 154
EM KG P+ +T++SLI LC K +A+ LF +++ P+ +T+T ++ C
Sbjct: 239 EEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR 298
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFT 187
E + ++A + +M +G++P+ T GFSP L T
Sbjct: 299 EDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCT 358
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YNAI++GLC GRV+EA +L + GL PD +Y I++S C+ +R+A L +M
Sbjct: 359 YNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM- 417
Query: 248 RKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYCAQGEL 285
K+ D +Y L+ E+ TY S+I YC +G L
Sbjct: 418 LKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNL 477
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
+ +S G PDS+ +I+GL K+++ + ++
Sbjct: 478 TLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARS 517
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 50/390 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T N IIK M VE + M +G+ PD++SYR ++ +C +A ++ M
Sbjct: 112 TLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVM 171
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
++G + D T++ +I K + A F+ ++ P+ I FT ++ C G
Sbjct: 172 LERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSI 231
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI-LRGMPEMGLS 217
+AF M +M+ K G+ P ++T+ ++I GLC G E+A + L+ +
Sbjct: 232 KQAFEMLEEMVGK--------GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHK 283
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL-SDEDTYASLI 276
P+ ++Y +ISG+C+ +L +A L M QGL + +TY +LI
Sbjct: 284 PNVLTYTAMISGYCREDKLNRAEMLLSRMKE---------------QGLVPNTNTYTTLI 328
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
+ +C G + L + MS +G P+ + ++NGL K+ R ++ ++ D
Sbjct: 329 DGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYK----MLEDGFQ 384
Query: 337 TSM-PNYIIYDTLI-ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ P+ Y+ L+ E+C + + L + ML+ +PD
Sbjct: 385 NGLKPDKFTYNILMSEHCKQENIRQALALF----------------NKMLKIGIQPDIHS 428
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y LI CR + ++ + E VR G +
Sbjct: 429 YTTLIAVFCRENRMKESEMFFEEAVRIGII 458
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 190/446 (42%), Gaps = 47/446 (10%)
Query: 15 FRHMVRNGVVCRFT--AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
FRH +R +VC + RNSE + + +++ + R+++ V ++ M +GL
Sbjct: 51 FRHFMRLYIVCAMSLIGNRNSEKACEVMRC---MVESFSEVGRLKEAVEMVIEMHNQGLV 107
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
P+ + ++I A EM +G+ PD+ +Y ++ C + EA
Sbjct: 108 PNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKW 167
Query: 133 FQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
ML D+ TFT ++ +G ++A +++ G P L +
Sbjct: 168 LSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD--------MGLEPNLINFT 219
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I GLC G +++A +L M G P+ ++ +I G C+ KA+ L +++ R
Sbjct: 220 CMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRS 279
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
+ TY ++I+ YC + +L + L M +G +P++ +
Sbjct: 280 -------------ENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTT 326
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
LI+G KA + L+ +++ ++ PN Y+ ++ GL K
Sbjct: 327 LIDG-HCKAGNFERAYDLMNLMSSEGFS--PNLCTYNAIVN-----------GLCK---- 368
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
RG V EA + + + KPD YN+L+ +HC++ N+ +A ++ +M++ G + S
Sbjct: 369 RGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHS 428
Query: 430 VLALLTALRDHGMYNERSWVIQNTLR 455
L+ E + +R
Sbjct: 429 YTTLIAVFCRENRMKESEMFFEEAVR 454
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+SE +L TYN I+ C RV++ +L + GL PD +Y +++ C
Sbjct: 348 SSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENI 407
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A +M + GI PD +Y++LI C + R+ E+ F+E + P + T+T++
Sbjct: 408 RQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSM 467
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ C EG + A H++ G PD + TY AII GLC + +EA +
Sbjct: 468 ICGYCREGNLTLAMKFFHRLSDHGCAPDSI--------TYGAIISGLCKQSKRDEARSLY 519
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQ 232
M E GL P V+ I + +C+
Sbjct: 520 DSMIEKGLVPCEVTRITLAYEYCK 543
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 25/276 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
SE+ + ++ TY +I +C ++ + +L M E+GL P+ +Y +I G C
Sbjct: 279 SENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFE 338
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+AY+ M +G P+ TY++++ LC + R+ EAY + ++ PD T+ LM
Sbjct: 339 RAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILM 398
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C + +A + ++M+ G+ PD + +Y +I C R++E+
Sbjct: 399 SEHCKQENIRQALALFNKMLKIGIQPD--------IHSYTTLIAVFCRENRMKESEMFFE 450
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+G+ P +Y +I G+C+ L A K L + A D
Sbjct: 451 EAVRIGIIPTNKTYTSMICGYCREGNLTLAM--------KFFHRLSDHGCA------PDS 496
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
TY ++I+ C Q + + +L D M KG +P V
Sbjct: 497 ITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEV 532
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 13/225 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY +I HC E+ ++ M+ +G SP+ +Y ++ G C +AY+ +
Sbjct: 323 TYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDG 382
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
Q G+ PD FTY+ L+ C + + +A LF +ML PD ++TTL+ C E
Sbjct: 383 FQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRM 442
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
++ + + G++P TY ++I G C G + A+ + + G +P
Sbjct: 443 KESEMFFEEAVRIGIIPTNK--------TYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 494
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRK--VVWGLDEVTYAY 261
D+++Y +ISG C+ + +A L M K V + +T AY
Sbjct: 495 DSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAY 539
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 186/441 (42%), Gaps = 54/441 (12%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D +N +I C + + L M EKG P+ ++Y +I GFC + A++
Sbjct: 310 EPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQ 369
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM KG PD +T++SLI LC ++ EA L+ +M + IT+ TL+HA
Sbjct: 370 MYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFL 429
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG-----RVEEALGIL 208
+A+ + ++M+ +G D + TYN +I LC G ++EE LG+
Sbjct: 430 RGDSIQQAYKLVNEMLFRGFPLDNI--------TYNGLIKALCKTGLCKNDKMEETLGLY 481
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS- 267
M G+ + ++Y +I F + +++AY+L EM L +G
Sbjct: 482 HDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEM---------------LFRGFPL 526
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
D TY LI A C G + K L L +EM KG P ++L N + D
Sbjct: 527 DNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDA---- 582
Query: 328 LLIIADYMYTSM-PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE 385
L + D ++ + P+ + Y++LI C N + + L G+
Sbjct: 583 LRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMC------------ 630
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
P+ YN LI C + A + + V GF+ + + L+ +
Sbjct: 631 ----PNAVTYNTLISSFCYEDLFNDACLLLFKGVSNGFIPNEITWSILINCFVKKYQRDY 686
Query: 446 RSWVIQNTLRSCNLNDSELHK 466
+I NT + +L ++HK
Sbjct: 687 PPSIIDNTGLNIHLFLKQVHK 707
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 199/460 (43%), Gaps = 77/460 (16%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-----------NRC 90
T+N +I C R+ + +L M G + DAL Y ++ G C ++
Sbjct: 213 TFNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSKI 272
Query: 91 P-----------------GKAYEFKLEMDQK----GILPDAFTYSSLIQALCSKRRLSEA 129
P G+ E K + Q G PDAF ++ +I LC K L A
Sbjct: 273 PNPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSA 332
Query: 130 YHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
EM+ P+ IT+T L++ C +G+ AF M+ +M KG PD ++
Sbjct: 333 LEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPD--------IY 384
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
T+N++I+GLC ++EEALG+ M G+ + ++Y +I F + +++AY+L EM
Sbjct: 385 TFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEM 444
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+ + LD +TY L++ L C ++ + L L +M +G + +++
Sbjct: 445 LFR-GFPLDNITYNGLIKALCK--------TGLCKNDKMEETLGLYHDMFLEGVIANTIT 495
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLV 364
+ LI+ + D+ ++ + ++ P + I Y+ LI+ C + +GL+
Sbjct: 496 YNTLIHAFLR----GDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLI 551
Query: 365 K-------------------SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
+ SF G VN+A R M+ PD YN LI C+
Sbjct: 552 EEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLINGLCKN 611
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ +A N++ + G + + L+++ ++N+
Sbjct: 612 GRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFND 651
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 183/420 (43%), Gaps = 68/420 (16%)
Query: 66 MAEKGLSPDALSYRYVITGFC-------NNRC-PGKAYEFKLEMDQ---KGILPDAFTYS 114
M +G+SP ++ V+ FC + C G+ +E +D+ G DA Y
Sbjct: 191 MLSRGISPTVHTFGIVMKAFCMTFNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYG 250
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
L+ LC ++ EA L + + P+ + + TL++ G F +A + +Q +
Sbjct: 251 CLMPGLCRMGQVDEARVLLSK-IPNPNTVLYNTLINGYVASGRFEEAKDLLYQNM----- 304
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
+ GF P F +N +I GLC G + AL L M E G P+ ++Y I+I+GFC++
Sbjct: 305 --VIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDG 362
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
+++ A+++ EM K G Y T+ SLI C ++ + L L +
Sbjct: 363 KIQDAFQMYGEMSSK---GCKPDIY-----------TFNSLIYGLCKNDKMEEALGLYHD 408
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-- 351
M +G + +++ + LI+ + D+ ++ + ++ P + I Y+ LI+
Sbjct: 409 MFLEGVIANTITYNTLIHAFLR----GDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALC 464
Query: 352 ----CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
C N++ + +GL HD LEG + YN LI R +
Sbjct: 465 KTGLCKNDKMEETLGLY---------------HDMFLEG-VIANTITYNTLIHAFLRGDS 508
Query: 408 VHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN--------TLRSCNL 459
+ +AY + EM+ GF + L+ AL G + +I+ ++ SCN+
Sbjct: 509 IQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNI 568
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 69/331 (20%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + D+ T+N +I C ++E+ +G+ M +G+ + ++Y +I F
Sbjct: 375 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSI 434
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSK---------------------------- 123
+AY+ EM +G D TY+ LI+ALC
Sbjct: 435 QQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTI 494
Query: 124 ------------RRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+ +AY L EML P D+IT+ L+ A C G K + +M
Sbjct: 495 TYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEM 554
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
KG+ P++ + N + + C +G+V +AL LR M GL+PD V+Y +I+
Sbjct: 555 FGKGIF--------PSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLIN 606
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
G C+N +++A L +R G+ + VTY L+ ED L N C LF
Sbjct: 607 GLCKNGRIQEALNL---FNRLQTEGMCPNAVTYNTLISSFCYED----LFNDACLL--LF 657
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
K ++ G +P+ + S+LIN KK
Sbjct: 658 KGVS-------NGFIPNEITWSILINCFVKK 681
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 141/390 (36%), Gaps = 118/390 (30%)
Query: 181 FSPALFTYNA----------------------------------------------IIHG 194
F P +YN +IHG
Sbjct: 161 FEPTFKSYNVVLEILVSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFCMTFNDVIHG 220
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL 254
LC GR+ EA +L M G + DA+ Y ++ G C+ ++ +A L ++
Sbjct: 221 LCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSKIPNPNTVLY 280
Query: 255 DEVTYAYLMQGLSDEDT------------------YASLINAYCAQGELFKVLTLDDEMS 296
+ + Y+ G +E + +I+ C +G L L +EM
Sbjct: 281 NTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMV 340
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIE 350
KG P+ + ++LING K + +D A MY M P+ +++LI
Sbjct: 341 EKGFEPNVITYTILINGFCKDGKIQD---------AFQMYGEMSSKGCKPDIYTFNSLIY 391
Query: 351 N-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
C N++ + +GL HD LEG + YN LI R ++
Sbjct: 392 GLCKNDKMEEALGLY---------------HDMFLEG-VIANTITYNTLIHAFLRGDSIQ 435
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTAL------------RDHGMYNER--SWVIQNTLR 455
+AY + EM+ GF + L+ AL G+Y++ VI NT+
Sbjct: 436 QAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTIT 495
Query: 456 SCNL------NDS--ELHKVLNEIDTRKFP 477
L DS + +K++NE+ R FP
Sbjct: 496 YNTLIHAFLRGDSIQQAYKLVNEMLFRGFP 525
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 196/464 (42%), Gaps = 54/464 (11%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L + M F+ + IQ ++ T + +I C + ++ IL +
Sbjct: 57 FGKILGSLVKMNHFSTAISFSHQMELKGIQPNIVTLSILINSFCHLNQLNYAFSILGKIL 116
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P+ ++ +I G C N KA F + KG + +Y LI LC
Sbjct: 117 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 176
Query: 128 EAYHLFQE---MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
A L ++ +L PD + + T++ A C + S + ++ +MI V P
Sbjct: 177 AALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMI--------VNKIHPN 228
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+ TYN +I+G LG+++EA+G+L M +SPD +++ ++ G C+ E++KA +
Sbjct: 229 VITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLA 288
Query: 245 EMDRKVVWGLDEVTYAYLMQG----------------------LSDEDTYASLINAYCAQ 282
M ++ V D VTY+ LM G + +Y +IN C
Sbjct: 289 VMIKQRVEP-DIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKN 347
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
+ + L EM PD+V + LI+GL K R D L++ + N
Sbjct: 348 KMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWD---LLVEMHDIGQPANV 404
Query: 343 IIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
I Y++L++ C N++ + L+K +G+ +P+ Y +L+
Sbjct: 405 ITYNSLLDALCKNHQVDKAIALLKKIKDQGI----------------QPNMYTYTILVDG 448
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
C+ + A +Y +++ G+ ++ ++ G+++E
Sbjct: 449 LCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDE 492
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 140/285 (49%), Gaps = 27/285 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D+ T+ ++ C V+K +L M ++ + PD ++Y ++ G+ + K
Sbjct: 258 KNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNK 317
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A + +G+ P+ F+Y+ +I LC + ++EA +LF+EM S PD +++ +L+
Sbjct: 318 AKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLID 377
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA-LFTYNAIIHGLCFLGRVEEALGILR 209
C G S + + +M G PA + TYN+++ LC +V++A+ +L+
Sbjct: 378 GLCKSGRISDVWDLLVEMHDIG---------QPANVITYNSLLDALCKNHQVDKAIALLK 428
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ + G+ P+ +Y I++ G C+N L A E+ D +T Y + +
Sbjct: 429 KIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIY----------HDLLTKGYPL----NV 474
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y ++N +C +G + L+L +M G P+++ LI L
Sbjct: 475 SMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICAL 519
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 150/371 (40%), Gaps = 74/371 (19%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------- 179
P F ++ + FS A HQM KG+ P+ VT
Sbjct: 52 PPIFEFGKILGSLVKMNHFSTAISFSHQMELKGIQPNIVTLSILINSFCHLNQLNYAFSI 111
Query: 180 -------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
G+ P T +I+GLC G++ +AL + G + VSY I+I+G C+
Sbjct: 112 LGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCK 171
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED---------------------- 270
+ E + A +L +E + ++ D V Y ++ L +
Sbjct: 172 SGETKAALQL-LEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVI 230
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +LI + G++ + + L ++MS K PD + + L++GL K+ K + L ++
Sbjct: 231 TYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVM 290
Query: 331 IADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG------------------ 371
I + P+ + Y +L++ E L + +RG
Sbjct: 291 IKQRVE---PDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKN 347
Query: 372 -LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
+VNEAA M N PD YN LI C+ + +++ +EM G +++ +
Sbjct: 348 KMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITY 407
Query: 431 LALLTAL-RDH 440
+LL AL ++H
Sbjct: 408 NSLLDALCKNH 418
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S ++ D +YN +I C R+ +L M + G + ++Y ++ C N
Sbjct: 362 SSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVD 421
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA ++ +GI P+ +TY+ L+ LC RL +A ++ ++L+ P + + ++
Sbjct: 422 KAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMV 481
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C EG F +A + +M G P+ + TY +I L + ++A+ +LR
Sbjct: 482 NEFCKEGLFDEALSLLSKMEDNGCTPNAI--------TYQTLICALFENNKNDKAVKLLR 533
Query: 210 GMPEMGL 216
M GL
Sbjct: 534 EMIVRGL 540
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ TYN ++ C +V+K + +L+ + ++G+ P+ +Y ++ G C N A E
Sbjct: 403 NVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIY 462
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++ KG + Y+ ++ C + EA L +M P+ IT+ TL+ A
Sbjct: 463 HDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFEN 522
Query: 156 GEFSKAFHMHHQMIHKGVL 174
+ KA + +MI +G+L
Sbjct: 523 NKNDKAVKLLREMIVRGLL 541
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 204/463 (44%), Gaps = 50/463 (10%)
Query: 2 KLLRDSFTATLKTFRHMVR----NGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQ 54
K+L+ + + T+ ++R NG V F S+ I+ D +Y +I C +
Sbjct: 70 KILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIG 129
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+ + +LR + + PD + Y +I G C ++ A++ EM +K + P+ TY+
Sbjct: 130 QTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYT 189
Query: 115 SLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
SLI C +L +A+ L EM+ P+ TF TL+ C EG+ +A + M+ +
Sbjct: 190 SLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKE 249
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV PD +FTYNA++ G + +A + M +MG++ D SY ++ISG
Sbjct: 250 GVGPD--------VFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLS 301
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
+ + L +A +L M + V + D Y+SLI+ C G + L
Sbjct: 302 KMKMLDEAMDLFEGMRNENV--------------IPDVVAYSSLIDGLCKSGRINSALKY 347
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
DEM +G P+ + + LI+ L K + D LL I D + N Y+ L++
Sbjct: 348 VDEMHDRGQPPNVITYTSLIDALCKSHQV-DKAIALLKKIKDQGIQA--NMYTYNILVD- 403
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
GL K G + +A + +L + D Y+++I C+ +A
Sbjct: 404 ----------GLCKD----GRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEA 449
Query: 412 YNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
+ +M G V + ++ A + M ++ +++ +
Sbjct: 450 LTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 492
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 136 MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
M PP I F ++ + + H+ +M G+ +++T N +I+
Sbjct: 4 MRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYIT--------LNILINSY 55
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD 255
C L ++ A + + ++G PD ++Y +I G C N +++++ DR V G+
Sbjct: 56 CHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFH---DRLVSQGIK 112
Query: 256 EVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
D +Y +LIN C G+ L L ++ + PD V+ + +I+GL
Sbjct: 113 -----------LDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLC 161
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
K +D L + PN + Y +LI F V L K+F GL+NE
Sbjct: 162 KDKLVRDA---FDLYCEMFEKRVFPNVVTYTSLIYG-----FCIVGQLDKAF---GLLNE 210
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
M+ N P+ +N L+ C+ + +A ++ M++ G +F+ AL+
Sbjct: 211 -------MVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALM 262
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ ++ TYN ++ C R+ + + + KG + D ++Y +I G C +
Sbjct: 389 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDE 448
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ KG +PDA Y ++I A K +A L +EM++
Sbjct: 449 ALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIA 493
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 173/385 (44%), Gaps = 53/385 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ Q + +Y +I C + +LR + + P+ + Y +I C ++
Sbjct: 77 AKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVI 136
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
A++ +M K I PD TY++L+ RL EA LF +ML PD TF L+
Sbjct: 137 DAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILV 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C EGE KA ++ MI + V PD + TYN+++ G + + +A +
Sbjct: 197 DGLCKEGEMKKARNVLAVMIKQSVDPDVI--------TYNSLMDGYFLVKQENKATFVFN 248
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--- 266
M G++PD SY ++I+G C+ + + +A L EM K + + VTY+ L+ GL
Sbjct: 249 TMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSM-APNTVTYSSLIDGLHKS 307
Query: 267 -------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
+D TY SL++A C ++ K +TL ++ +G PD
Sbjct: 308 GRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTY 367
Query: 308 SLLINGLDKKARTKDTK-AHLLLIIADYMYTSM-----------------PNYIIYDTLI 349
++L++GL K R KD + + +L+I Y S+ PN + ++ LI
Sbjct: 368 TILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILI 427
Query: 350 ENCSNNEFK-SVVGLVKSFSMRGLV 373
N+ V L++ RGL+
Sbjct: 428 RALFENDMNDKAVELLREMIARGLL 452
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 181/411 (44%), Gaps = 64/411 (15%)
Query: 66 MAEKGLSPDALSYRYVITGFCN------NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
M +G+ D ++ ++ FC+ N + F ++ KG + +Y +LI
Sbjct: 34 MELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDG 93
Query: 120 LCSKRRLSEAYHLFQE---MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
LC A + + +L P+ + ++T++++ C + AF ++ QM+ K + PD
Sbjct: 94 LCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPD 153
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
+T YN +++G +GR++EA+G+ M + PD ++ I++ G C+ E+
Sbjct: 154 VIT--------YNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEM 205
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQG----------------------LSDEDTYAS 274
+KA + M ++ V D +TY LM G D +Y+
Sbjct: 206 KKARNVLAVMIKQSV-DPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSV 264
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
+IN C + + + L EM K P++V S LI+GL K R D ++ +
Sbjct: 265 MINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWD----LVNEM 320
Query: 335 MYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
P + I Y++L++ C N++ + L+ +G+ +PD
Sbjct: 321 HNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI----------------QPDI 364
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF-VSHMF-SVLALLTALRDHG 441
Y +L+ C+ + A +Y ++ G+ + +F L+LL+ + D+G
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNG 415
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 29/286 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ I + T+N +I C + V M ++GL P+ ++Y +I G CNN
Sbjct: 132 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 191
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF-----QEMLSPPDDITFTT 147
+A + +M G+ P+ TY++LI C K+ + EA +F QE++ P+ ITF T
Sbjct: 192 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV--PNVITFNT 249
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
++ A C EG + F + M+ +G+LP+ + TYN +I GLC ++ A +
Sbjct: 250 MIDAYCKEGMMEEGFSLCSSMLDEGILPN--------VSTYNCLIAGLCRKQDLQAAKEL 301
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
L M GL D V+Y I+I G C+N + R A +L EM GL
Sbjct: 302 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM---FNLGLK-----------P 347
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+ TY +L++ YC +G+L L + M + P+ V ++LI G
Sbjct: 348 NHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 393
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 182/389 (46%), Gaps = 53/389 (13%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+ + M ++ + + ++ I G C KA + +M GI P+ TY++L+ C
Sbjct: 53 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 112
Query: 122 ---SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
S ++ +A +EML+ P+++TF TL+ C + + A +M +G+ P
Sbjct: 113 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 172
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ V TYN++I+GLC G++EEA+ + M +GL P+ V+Y +I+GFC+ +
Sbjct: 173 NIV--------TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 224
Query: 236 LRKAYELKVEMDRKV----VWGLDEVTYAYLMQGLSDE-----------------DTYAS 274
+++A ++ ++ ++ V + + AY +G+ +E TY
Sbjct: 225 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 284
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI C + +L L +EM +KG D V ++LI+GL K ++++ + L+ +
Sbjct: 285 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK---LLNEMF 341
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
PN++ Y+TL++ + M G + A M + +P+
Sbjct: 342 NLGLKPNHVTYNTLMD---------------GYCMEGKLKAALNVRTRMEKERKQPNVVT 386
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
YN+LI +C+ + A + EM+ G
Sbjct: 387 YNVLIKGYCKINKLEAANGLLNEMLEKGL 415
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 38/325 (11%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
++ A K F M + G ++ ++ TYN +I C ++E+ + +
Sbjct: 153 ENVAAAKKAFEEMQKQG-------------LKPNIVTYNSLINGLCNNGKLEEAIDLWDK 199
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M GL P+ ++Y +I GFC + +A + ++ ++ ++P+ T++++I A C +
Sbjct: 200 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 259
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ E + L ML P+ T+ L+ C + + A + ++M +KG+ D V
Sbjct: 260 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV---- 315
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
TYN +I GLC + A +L M +GL P+ V+Y ++ G+C +L+ A +
Sbjct: 316 ----TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 371
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ M+++ + + TY LI YC +L L +EM KG P
Sbjct: 372 RTRMEKE--------------RKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 417
Query: 303 DSVIDSLLINGLDKKARTKDTKAHL 327
+ ++ + +K + D + HL
Sbjct: 418 NRTTYDIVRLEMLEKGFSPDIEGHL 442
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 55/350 (15%)
Query: 116 LIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMHACCLEGEFSKAFHMHHQMIHKG 172
L+ A L AY F ++ T+ L+ A E + +++ +MI +
Sbjct: 2 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 61
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+ + L T+N I+GLC G++ +A + M G+SP+ V+Y ++ G+C+
Sbjct: 62 IHTN--------LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 113
Query: 233 NRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGL-SDED------------------- 270
K Y+ + M + + +EVT+ L+ G DE+
Sbjct: 114 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 173
Query: 271 --TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
TY SLIN C G+L + + L D+M G P+ V + LING KK K+
Sbjct: 174 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATK--- 230
Query: 329 LIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+ D + PN I ++T+I+ ++ G++ E +ML+
Sbjct: 231 -VFDDVSKQELVPNVITFNTMID---------------AYCKEGMMEEGFSLCSSMLDEG 274
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
P+ + YN LI CR+ ++ A + EM G + + L+ L
Sbjct: 275 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 35/269 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF +L + N ++ L ++ + + + M + + + ++ I I+G C+ +L KA
Sbjct: 26 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 85
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG---ELFKVLTLDDEMS 296
+ +M WG+ TY +L++ YC +G +++K EM
Sbjct: 86 EDAIEDMK---AWGISPNVV-----------TYNTLVDGYCKRGSAGKMYKAEAFMKEML 131
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
P+ V + LI+G K K + + PN + Y++LI NN
Sbjct: 132 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGL---KPNIVTYNSLINGLCNN- 187
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
G + EA D M+ KP+ YN LI C++ + +A ++
Sbjct: 188 --------------GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 233
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNE 445
++ + V ++ + ++ A GM E
Sbjct: 234 DVSKQELVPNVITFNTMIDAYCKEGMMEE 262
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 29/278 (10%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
T+N +I C + V M ++GL P+ ++Y +I G CNN +A + +
Sbjct: 274 VTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF-----QEMLSPPDDITFTTLMHACCLE 155
M G+ P+ TY++LI C K+ + EA +F QE++ P+ ITF T++ A C E
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV--PNVITFNTMIDAYCKE 391
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G + F + M+ +G+LP+ + TYN +I GLC ++ A +L M G
Sbjct: 392 GMMEEGFSLCSSMLDEGILPN--------VSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L D V+Y I+I G C+N + R A +L EM GL + TY +L
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEM---FNLGLK-----------PNHVTYNTL 489
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
++ YC +G+L L + M + P+ V ++LI G
Sbjct: 490 MDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 182/390 (46%), Gaps = 55/390 (14%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+ + M ++ + + ++ I G C KA + +M GI P+ TY++L+ C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 122 ---SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
S ++ +A +EML+ P+++TF TL+ C + + A +M +G+ P
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ V TYN++I+GLC G++EEA+ + M +GL P+ V+Y +I+GFC+ +
Sbjct: 307 NIV--------TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 236 LRKAYEL-----KVEMDRKVVWGLDEVTYAYLMQGLSDE-----------------DTYA 273
+++A ++ K E+ V+ + + AY +G+ +E TY
Sbjct: 359 MKEATKVFDDVSKQELVPNVI-TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYN 417
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
LI C + +L L +EM +KG D V ++LI+GL K ++++ + L+
Sbjct: 418 CLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK---LLNEM 474
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ PN++ Y+TL++ + M G + A M + +P+
Sbjct: 475 FNLGLKPNHVTYNTLMD---------------GYCMEGKLKAALNVRTRMEKERKQPNVV 519
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
YN+LI +C+ + A + EM+ G
Sbjct: 520 TYNVLIKGYCKINKLEAANGLLNEMLEKGL 549
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 38/325 (11%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
++ A K F M + G ++ ++ TYN +I C ++E+ + +
Sbjct: 287 ENVAAAKKAFEEMQKQG-------------LKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M GL P+ ++Y +I GFC + +A + ++ ++ ++P+ T++++I A C +
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ E + L ML P+ T+ L+ C + + A + ++M +KG+ D V
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV---- 449
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
TYN +I GLC + A +L M +GL P+ V+Y ++ G+C +L+ A +
Sbjct: 450 ----TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+ M+++ + + TY LI YC +L L +EM KG P
Sbjct: 506 RTRMEKE--------------RKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
Query: 303 DSVIDSLLINGLDKKARTKDTKAHL 327
+ ++ + +K + D + HL
Sbjct: 552 NRTTYDIVRLEMLEKGFSPDIEGHL 576
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 147/356 (41%), Gaps = 55/356 (15%)
Query: 110 AFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMHACCLEGEFSKAFHMHH 166
A L+ A L AY F ++ T+ L+ A E + +++
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
+MI + + + L T+N I+GLC G++ +A + M G+SP+ V+Y +
Sbjct: 190 EMIKRRIHTN--------LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTL 241
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGL-SDED------------- 270
+ G+C+ K Y+ + M + + +EVT+ L+ G DE+
Sbjct: 242 VDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQK 301
Query: 271 --------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY SLIN C G+L + + L D+M G P+ V + LING KK K+
Sbjct: 302 QGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKE 361
Query: 323 TKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
+ D + PN I ++T+I+ ++ G++ E
Sbjct: 362 ATK----VFDDVSKQELVPNVITFNTMID---------------AYCKEGMMEEGFSLCS 402
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+ML+ P+ + YN LI CR+ ++ A + EM G + + L+ L
Sbjct: 403 SMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 35/269 (13%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
GF +L + N ++ L ++ + + + M + + + ++ I I+G C+ +L KA
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG---ELFKVLTLDDEMS 296
+ +M WG+ TY +L++ YC +G +++K EM
Sbjct: 220 EDAIEDMK---AWGISPNVV-----------TYNTLVDGYCKRGSAGKMYKAEAFMKEML 265
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
P+ V + LI+G K K + + PN + Y++LI NN
Sbjct: 266 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGL---KPNIVTYNSLINGLCNN- 321
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
G + EA D M+ KP+ YN LI C++ + +A ++
Sbjct: 322 --------------GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 367
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNE 445
++ + V ++ + ++ A GM E
Sbjct: 368 DVSKQELVPNVITFNTMIDAYCKEGMMEE 396
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 179/409 (43%), Gaps = 52/409 (12%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TY +I C M + + +LR + K ++ + + Y +I G C ++ AY E
Sbjct: 159 VTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSE 218
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M K I P T+SSLI C + +A+ LF EM+ PD TF L+ A C EG+
Sbjct: 219 MIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGK 278
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A ++ M+ +GV P + TYN ++ G C + V +A +L + M ++
Sbjct: 279 IKEAKNVIAVMMKEGV--------EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA 330
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------- 266
P++ SY I+I+GFC+ + + +A L EM + + +VTY L+ GL
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGI-APHKVTYNSLIDGLCKAGRIPYAWE 389
Query: 267 -----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
+D TY SLI+ +C + K + L ++ G P+ ++LI+GL
Sbjct: 390 LVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLC 449
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
K + K+ + + D LI+ + N + + ++ GL +E
Sbjct: 450 KGGQLKNAQD-----------------VFQDLLIKGYNVNAWTYNI-MINGLCKEGLFDE 491
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
A M + PD Y +I + KA + EMV G +
Sbjct: 492 AEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGLL 540
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 191/412 (46%), Gaps = 48/412 (11%)
Query: 40 LATYNKIIKQH-CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+ + KI+K CL +V + + + G + ++Y +I G C A +
Sbjct: 122 FSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVL 181
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
+++ K + + YS++I LC + +++AY L+ EM+ PP +TF++L++ C+
Sbjct: 182 RQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIV 241
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+F AF + ++M+ K + PD +T+N ++ LC G+++EA ++ M + G
Sbjct: 242 GKFKDAFRLFNEMVMKNINPD--------AYTFNILVDALCKEGKIKEAKNVIAVMMKEG 293
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+ P V+Y ++ G+C E+ KA + + R M+ + +Y +
Sbjct: 294 VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISR--------------MRVAPNSRSYNIM 339
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
IN +C + + L L EM +G P V + LI+GL K R + ++ +
Sbjct: 340 INGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRI----PYAWELVDEMH 395
Query: 336 YTSMPNYII-YDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+P I+ Y++LI+ C N + LVK G+ +P+
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI----------------QPNMC 439
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI C+ + A +++ +++ G+ + ++ ++ L G+++E
Sbjct: 440 TYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDE 491
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 33/256 (12%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E ++ + TYN ++ +CL+ V K +L ++ ++P++ SY +I GFC
Sbjct: 287 AVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKI 346
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM +GI P TY+SLI LC R+ A+ L EM + P D +T+
Sbjct: 347 KMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTY 406
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
+L+ C KA + ++ G+ P+ T
Sbjct: 407 NSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLI 466
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G++ +TYN +I+GLC G +EA +L M + G+ PDAV+Y +I E K
Sbjct: 467 KGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEK 526
Query: 239 AYELKVEMDRKVVWGL 254
A +L EM V+ GL
Sbjct: 527 AQKLLREM---VIKGL 539
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 29/300 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D T+N ++ C ++++ ++ M ++G+ P ++Y ++ G+C GK
Sbjct: 257 KNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGK 316
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A + + + P++ +Y+ +I C + + EA LF EM P +T+ +L+
Sbjct: 317 AKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G A+ + +M H +P + TYN++I C V++A+ +++
Sbjct: 377 GLCKAGRIPYAWELVDEM-HNNCIP-------ADIVTYNSLIDVFCKNQHVDKAIALVKK 428
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ E G+ P+ +Y I+I G C+ +L+ A +V L++G + +
Sbjct: 429 IKEHGIQPNMCTYNILIDGLCKGGQLKNA---------------QDVFQDLLIKGYNVNA 473
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +IN C +G + L +M G +PD+V +I L K ++ KA LL
Sbjct: 474 WTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHK--DENEKAQKLL 531
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 147/344 (42%), Gaps = 55/344 (15%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFS 159
+M+ KG+ PD FT S LI C +++ A+ +F ++L CL G+ +
Sbjct: 92 QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILK-----------MGLCLNGKVN 140
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+A H ++ GF TY +I+GLC +G+ AL +LR + ++ +
Sbjct: 141 EALLFHDHVL--------ALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTN 192
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAY 279
V Y +I G C+++ + AY L EM K + T++SLI +
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP--------------PTVVTFSSLIYGF 238
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C G+ L +EM K PD+ ++L++ L K+ + K+ K +IA M +
Sbjct: 239 CIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN----VIAVMMKEGV 294
Query: 340 -PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P + Y+TL++ C NE V +A + P+ YN+
Sbjct: 295 EPTVVTYNTLMDGYCLVNE----------------VGKAKHVLSIISRMRVAPNSRSYNI 338
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+I C+ V +A ++ EM G H + +L+ L G
Sbjct: 339 MINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAG 382
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 185/440 (42%), Gaps = 71/440 (16%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T N IK CL ++ + + + G D +SY +I G C A E
Sbjct: 137 EPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALE 196
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+D K + D YS++I ++C + +++A+ L+ EM+S + +T++ L+ C
Sbjct: 197 LLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC 256
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALF 186
+ G+ A + ++M + + PD T G P +
Sbjct: 257 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIV 316
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TYN+++ G C + V A IL M G++ SY IVI+GFC+ + + +A +L EM
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM 376
Query: 247 DRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGE 284
K ++ + +TY L+ GL D TY+S+++A C
Sbjct: 377 HHKQIFP-NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL 435
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ K + L ++ +G P+ ++LI+GL K R +D + I
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN------------------I 477
Query: 345 YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
++ L+ N + +++ F GL +EA M + + PD Y ++I
Sbjct: 478 FEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFD 537
Query: 405 RLNVHKAYNMYMEMVRYGFV 424
+ KA + EM+ G +
Sbjct: 538 KDENDKAEKLLREMITRGLL 557
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 14/241 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TYN ++ +CL+ V IL M+ +G++ SY VI GFC + +
Sbjct: 309 QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQ 368
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A + EM K I P+ TY+SLI LC R+S A L M PD IT+++++
Sbjct: 369 AMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C KA + ++ +G+ P+ ++TY +I GLC GR+E+A I
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPN--------MYTYTILIDGLCKGGRLEDARNIFED 480
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSDE 269
+ G + +Y ++I GFC + +A L +M D + D +TY ++ L D+
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP--DAITYEIIICSLFDK 538
Query: 270 D 270
D
Sbjct: 539 D 539
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 190/438 (43%), Gaps = 58/438 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ + +N +I C + + +L + + G PD ++ I GFC +A
Sbjct: 101 IKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQAL 160
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F ++ G D +Y +LI LC A L + + L D + ++T++ +
Sbjct: 161 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSM 220
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + AF ++ +M+ + + S + TY+A+I G C +G++++A+G+ M
Sbjct: 221 CKDKNVNDAFDLYSEMVSRRI--------SSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG--LSDE- 269
++PD ++ I++ FC+ +++A M ++ + D VTY LM G L +E
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP-DIVTYNSLMDGYCLVNEV 331
Query: 270 -------------------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+Y +IN +C + + + L EM HK P+ + + L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSF 367
I+GL K R L + D M+ P+ I Y ++++ C N+ + L+
Sbjct: 392 IDGLCKSGRIS-----YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL 446
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
+G+ +P+ Y +LI C+ + A N++ +++ G+ +
Sbjct: 447 KDQGI----------------RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTV 490
Query: 428 FSVLALLTALRDHGMYNE 445
+ ++ HG+++E
Sbjct: 491 NTYTVMIQGFCSHGLFDE 508
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 35/318 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I ++ TY+ +I C++ +++ +G+ M + ++PD ++ ++ FC
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLM 149
+A M ++GI PD TY+SL+ C ++ A + M T + ++
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C +A + +M HK + P+ + TYN++I GLC GR+ AL ++
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVI--------TYNSLIDGLCKSGRISYALELID 409
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD- 268
M + G PD ++Y ++ C+N + KA L +++ + + + TY L+ GL
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP-NMYTYTILIDGLCKG 468
Query: 269 ---ED------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
ED TY +I +C+ G + L+L +M +PD++
Sbjct: 469 GRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITY 528
Query: 308 SLLINGL-DKKARTKDTK 324
++I L DK K K
Sbjct: 529 EIIICSLFDKDENDKAEK 546
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 54/337 (16%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHM 164
P + ++ +L + LFQ+M P+ + F L++ C G AF +
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+++ G PD +T N I G C G++ +AL + +G D VSY
Sbjct: 128 LAKILKMGYEPDTIT--------LNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYG 179
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------------------ 266
+I+G C+ E R A EL +D K+V LD V Y+ ++ +
Sbjct: 180 TLINGLCKVGETRAALELLRRVDGKLVQ-LDVVMYSTIIDSMCKDKNVNDAFDLYSEMVS 238
Query: 267 ----SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
S+ TY++LI+ +C G+L + L ++M+ + PD ++L++ K+ R K+
Sbjct: 239 RRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKE 298
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
K L +++ + P+ + Y++L++ C NE ++ + S RG V R+
Sbjct: 299 AKNGLAMMMKQGI---KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG-VTATVRS-- 352
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
YN++I C+ V +A ++ EM
Sbjct: 353 -------------YNIVINGFCKIKMVDQAMKLFKEM 376
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 188/439 (42%), Gaps = 69/439 (15%)
Query: 18 MVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALS 77
M+RN + R ++ DL+ N I ++EK + L M G+ PD +S
Sbjct: 247 MLRNAL--RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVS 304
Query: 78 YRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
Y +I G+C+ A E EM KG PD +Y +++ LC R++ E L + M+
Sbjct: 305 YNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMV 364
Query: 138 SP----PDDITFTTLMHACCLEGEF-----------SKAFHM-------------HHQMI 169
PD +T+ TL++A G K FH+ ++ I
Sbjct: 365 QNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNI 424
Query: 170 HKG---VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
K V+ + G +P + TY AII G C +G+++EA +L+ M + G P+ V+Y ++
Sbjct: 425 DKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVL 484
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
++G C N + +A E+ + + + W + +TY+ +M GL E G+L
Sbjct: 485 LNGLCHNGKSLEAREM-INVSEEHWWTPNAITYSAVMHGLRRE-------------GKLS 530
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYD 346
+ L EM KG LP+ V +LLI L + K +L +
Sbjct: 531 EACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYL-----------------EE 573
Query: 347 TLIENCSNN--EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
L + C+ N F SV + F G ++ A + M N PD Y L +
Sbjct: 574 CLHKGCAVNVVNFTSV---IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGK 630
Query: 405 RLNVHKAYNMYMEMVRYGF 423
+ + +A + ++M+ G
Sbjct: 631 KSRLDEASELIVKMLGKGI 649
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 167/386 (43%), Gaps = 47/386 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TYN +I + + LR EKG D + Y V+ FC N+ KA
Sbjct: 372 DQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLV 431
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++M KG PD TY+++I C ++ EA + Q+M P+ +T+T L++ C
Sbjct: 432 IDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHN 491
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A +MI+ ++P TY+A++HGL G++ EA + R M E G
Sbjct: 492 GKSLEA----REMINVSE----EHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG 543
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYAS 274
P+ V ++I C+N+ V G + L +G + + + S
Sbjct: 544 FLPNPVDINLLIQSLCRNQN---------------VVGAKKYLEECLHKGCAVNVVNFTS 588
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
+I +C G+L L++ ++M PD++ + L + L KK+R + ++ ++
Sbjct: 589 VIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKG 648
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ P + Y +I F G V++ + + M+ +P V
Sbjct: 649 ID---PTPVTYRAVIHR---------------FCQWGRVDDMMKLLEKMIA--RQPFKTV 688
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVR 420
YN +I C N +A + +++R
Sbjct: 689 YNQVIEKLCYFGNREEAEKLLGKVLR 714
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 165/400 (41%), Gaps = 79/400 (19%)
Query: 62 ILRGMAEKGL--SPDALSY---RYVITGFCNNR------------------CPG------ 92
ILR M +G+ SP+A SY Y G N C
Sbjct: 219 ILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLV 278
Query: 93 ------KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDI 143
KA F M GI PD +Y+ LI+ C R+ +A L EM PPD +
Sbjct: 279 KGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKV 338
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKG-VLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
++ T+M C + + + + M+ ++PD V TYN +I+ L G +
Sbjct: 339 SYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV--------TYNTLIYALSKHGHAD 390
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+AL LR E G D V Y V+ FC+N+ + KA L ++M Y
Sbjct: 391 DALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM--------------YS 436
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
D TY ++I+ +C G++ + + +M G P++V ++L+NGL ++ +
Sbjct: 437 KGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLE 496
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
+ ++ + ++ +T PN I Y ++ GL + G ++EA
Sbjct: 497 AR-EMINVSEEHWWT--PNAITYSAVMH-----------GLRRE----GKLSEACDLTRE 538
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
M+E + P+ NLLI CR NV A E + G
Sbjct: 539 MIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 13/246 (5%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+++A + R + C T + + N +I+ C Q V L
Sbjct: 515 TYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC 574
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
KG + + +++ VI GFC A +M PDA TY++L AL K RL
Sbjct: 575 LHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRL 634
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
EA L +ML P +T+ ++H C G + +MI + P
Sbjct: 635 DEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR----------QP 684
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
YN +I LC+ G EEA +L + DA + I+I + + AY++
Sbjct: 685 FKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVA 744
Query: 244 VEMDRK 249
+M R+
Sbjct: 745 CQMFRR 750
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 121/340 (35%), Gaps = 50/340 (14%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEML------SPPDDITFTTLMHACCLEGEFSKAF 162
DA Y +++ L R A + + M SP F+ +M + G A
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPE---AFSYVMVSYSRAGMLRNAL 252
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ M GV PD L N I+ L ++E+AL L M G+ PD VS
Sbjct: 253 RILTLMQKAGVEPD--------LSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVS 304
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y +I G+C + A EL EM K D+V+Y +M L C
Sbjct: 305 YNCLIKGYCDVHRIDDALELIAEMPFKGC-PPDKVSYYTVMAFL-------------CKD 350
Query: 283 GELFKVLTLDDEMSHKGSL-PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPN 341
++ +V L + M +L PD V + LI L K D L +
Sbjct: 351 RKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVG 410
Query: 342 YIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
Y +V SF +++A M PD Y +I
Sbjct: 411 Y------------------SAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDG 452
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
CR + +A M +M ++G + + LL L +G
Sbjct: 453 FCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNG 492
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 148/324 (45%), Gaps = 38/324 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ ++ TY+ ++ + + V K + M G+SP+ SY +I G CN++ +A
Sbjct: 303 VKLNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAV 362
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
+M + ++P+ TY+SLI LC R+S L EM + IT+T+LM A
Sbjct: 363 NLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDAL 422
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C KA + +M GV P ++TYN +I LC GR+ +A ++ M
Sbjct: 423 CKNHNLDKAIALFTKMKDLGV--------EPNVYTYNILIDRLCKSGRIADAWYLIDEMH 474
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLS--- 267
+ G + V+Y +I G C+N L KA E +++ WG+ D TY L+ GL
Sbjct: 475 DRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKIND---WGIQADVHTYTVLIDGLCKGG 531
Query: 268 -------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D TY +I+ C +G +VLTL +M G PD++
Sbjct: 532 RLKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYE 591
Query: 309 LLINGLDKKARTKDTKAHLLLIIA 332
++I L K + + L +IA
Sbjct: 592 IIICALFGKGKIDMAEKLLCEMIA 615
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 202/486 (41%), Gaps = 80/486 (16%)
Query: 1 MKLLRDSFTATLKTFRH-MVRNGVVCR---FTAARNSESIQQDLATYNKIIKQHCLMQRV 56
+KL + T TL T + + NG V + F ++ Q + +Y +I C
Sbjct: 124 LKLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGET 183
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
+ + +LR + + PD + Y +I C ++ AYE EM +K I P+ TYS+L
Sbjct: 184 KAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTL 243
Query: 117 IQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
I C +L +A LF EM+ PD TF L+ C GE KA ++ MI GV
Sbjct: 244 IYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGV 303
Query: 174 LPDFVT---------------------------GFSPALFTYNAIIHGLCFLGRVEEALG 206
+ VT G SP + +YN +I GLC V+EA+
Sbjct: 304 KLNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVN 363
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQG 265
+ + M + P+ V+Y +I G C++ + +L EM DR
Sbjct: 364 LFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQA-------------- 409
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
++ TY SL++A C L K + L +M G P+ ++LI+ L K R D
Sbjct: 410 -ANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIAD--- 465
Query: 326 HLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA 379
A Y+ M N + Y +LI+ GL K+ ++ + +
Sbjct: 466 ------AWYLIDEMHDRGQPANVVTYTSLID-----------GLCKNHNLDKAIEFFTKI 508
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRD 439
+D ++ D Y +LI C+ + A ++ ++ G+ + + +++ L
Sbjct: 509 NDWGIQA----DVHTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGLCK 564
Query: 440 HGMYNE 445
G+++E
Sbjct: 565 EGLFDE 570
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 198/475 (41%), Gaps = 105/475 (22%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F+ + IQ ++ T +I C + ++ IL + + G P+ ++ +I G C
Sbjct: 84 FSQQMELKGIQPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLC 143
Query: 87 NNRCPGKAY---------EFKLEMDQKGIL--------------------------PDAF 111
N KA+ EF+L GIL PD
Sbjct: 144 LNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVV 203
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQM 168
Y+++I +LC + +++AY L+ EM+ P+ +T++TL++ C+ G+ A + ++M
Sbjct: 204 MYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEM 263
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+ K + PD ++T+N +I GLC G + +A +L M + G+ + V+Y ++
Sbjct: 264 MLKNIDPD--------VYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMD 315
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY--LMQGLSDED---------------- 270
G+ Q E+ KA ++ M R WG+ ++Y ++ GL +
Sbjct: 316 GYFQVNEVNKAKDVFEIMVR---WGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRN 372
Query: 271 ------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
TY SLI C G + VL L DEM +G + + + L++ L K
Sbjct: 373 MVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAI 432
Query: 325 AHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
A ++T M PN Y+ LI+ L KS G + +A
Sbjct: 433 A---------LFTKMKDLGVEPNVYTYNILIDR-----------LCKS----GRIADAWY 468
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS--HMFSVL 431
D M + + Y LI C+ N+ KA + ++ +G + H ++VL
Sbjct: 469 LIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVL 523
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 173/421 (41%), Gaps = 78/421 (18%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+ KI+ + + + M KG+ P+ ++ +I FC+ A+ ++
Sbjct: 65 FGKILSSLVKLNHFHTAISFSQQMELKGIQPNIVTLTILINSFCHLNQLNFAFSILGKIL 124
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAF 162
+ G P+ T ++LI LC L GE KAF
Sbjct: 125 KLGYEPNTVTLTTLINGLC--------------------------------LNGEVKKAF 152
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
H + +I K F F+Y +I+GLC G + AL +LR + + + PD V
Sbjct: 153 HFYDDVIAK--------EFQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVM 204
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y +I C+++ + AYEL EM K ++ + VTY+ L+ G +C
Sbjct: 205 YTTIIDSLCKDKLVTDAYELYSEMVEKKIFP-NVVTYSTLIYG-------------FCIV 250
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
G+L + L +EM K PD ++LI+GL K + + L L+I + N
Sbjct: 251 GQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKL---NV 307
Query: 343 IIYDTLIE--------NCSNNEFKSVVG------------LVKSFSMRGLVNEAARAHDT 382
+ Y +L++ N + + F+ +V ++ +V+EA
Sbjct: 308 VTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKK 367
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL-RDHG 441
M N P+ YN LI+ C+ + ++ EM G +++ + +L+ AL ++H
Sbjct: 368 MHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHN 427
Query: 442 M 442
+
Sbjct: 428 L 428
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
F N IQ D+ TY +I C R++ + + R + KG D L+Y +I+G
Sbjct: 503 EFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGL 562
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
C + +M++ G PDA TY +I AL K ++ A L EM++
Sbjct: 563 CKEGLFDEVLTLLSKMEENGCAPDAITYEIIICALFGKGKIDMAEKLLCEMIA 615
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 170/384 (44%), Gaps = 45/384 (11%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+ + +GL P ++Y ++ CN A + EM Q+GI+P+ Y++LI+ C
Sbjct: 110 VYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFC 169
Query: 122 SKRRLSEA---YHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
++ + EA L +E P+ T+ TL+ C G + F ++ M+ G+ PD V
Sbjct: 170 NEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVV 229
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
T + ++ LC +G +E A M + G+ P+ Y +I G+C+ +L +
Sbjct: 230 T--------FAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVE 281
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A L+ EM+R V+G D T + L++GL C G + L +EM
Sbjct: 282 AMRLRDEMERNGVFG-DVFTCSILVKGL-------------CDSGRFEEAKNLMEEMEKA 327
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEF 357
G ++V + +I+G K D + + + PN I + TLI+ C
Sbjct: 328 GVFANAVTYNAVIDGYCKMG---DMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNM 384
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
K+ +GL ++GLV PD Y LI HC+ N A+ ++ E
Sbjct: 385 KAAMGLYIEMVIKGLV----------------PDVVTYTALIDGHCKVENSKVAFELHKE 428
Query: 418 MVRYGFVSHMFSVLALLTALRDHG 441
M+ G ++ +V +L+ L G
Sbjct: 429 MMEAGLTPNVVTVTSLIDGLLKEG 452
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 183/421 (43%), Gaps = 49/421 (11%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
RF ++ +L TY +I +C V++ I M GL PD +++ ++
Sbjct: 179 RFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVL 238
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DD 142
C A + MD+ G+ P+ + Y+ LI C L EA L EM D
Sbjct: 239 CKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDV 298
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T + L+ C G F +A ++ +M GV + VT YNA+I G C +G +E
Sbjct: 299 FTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVT--------YNAVIDGYCKMGDME 350
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+A+ + M E + P+ +++ +I GFC+ ++ A L +EM V+ GL
Sbjct: 351 KAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEM---VIKGL-------- 399
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART-- 320
+ D TY +LI+ +C L EM G P+ V + LI+GL K+ +T
Sbjct: 400 ---VPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYG 456
Query: 321 ------KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
+ T+ D+ PN ++Y LI+ GL K G +
Sbjct: 457 AIKLFLEKTEVGSPGGKTDHSGVCSPNEVMYAALIQ-----------GLCKD----GRIF 501
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+A + M +KPD +Y +++ H R ++ ++ +M++ G + + SV +L
Sbjct: 502 KATKFFKDMRCSGFKPDMVLYVIMLEAHFRFKHMFDVMMLHADMLKTGVLRNT-SVCRVL 560
Query: 435 T 435
T
Sbjct: 561 T 561
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 36/297 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ T + ++K C R E+ ++ M + G+ +A++Y VI G+C KA E
Sbjct: 297 DVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVC 356
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+M ++ I P+ T+S+LI C K + A L+ EM+ PD +T+T L+ C
Sbjct: 357 SQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKV 416
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
AF +H +M+ G+ P+ V T ++I GL G+ A+ + E+G
Sbjct: 417 ENSKVAFELHKEMMEAGLTPNVV--------TVTSLIDGLLKEGKTYGAIKLFLEKTEVG 468
Query: 216 -----------LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
SP+ V Y +I G C++ + KA + +M R + D V Y +++
Sbjct: 469 SPGGKTDHSGVCSPNEVMYAALIQGLCKDGRIFKATKFFKDM-RCSGFKPDMVLYVIMLE 527
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
A+ +F V+ L +M G L ++ + +L G ++ K
Sbjct: 528 -------------AHFRFKHMFDVMMLHADMLKTGVLRNTSVCRVLTRGYEENGGLK 571
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 110/291 (37%), Gaps = 36/291 (12%)
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
+ +K + Q +H P + P+L NA++H L + + + +
Sbjct: 62 KNNITKTTSLKKQHLHISNKPTTL----PSLRECNALLHSLVKSKKFDSVWSVYNNLLSR 117
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
GL P ++Y I+++ C + A ++ EM ++ + + + Y +
Sbjct: 118 GLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRGI--------------VPNVVVYTT 163
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LI +C +G++ + M G P+ LI+G K K
Sbjct: 164 LIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRV----------- 212
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ IY ++ N + + + LV G + A M + P+ V
Sbjct: 213 -------FEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYV 265
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN LI +C+ ++ +A + EM R G +F+ L+ L D G + E
Sbjct: 266 YNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEE 316
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 171/403 (42%), Gaps = 51/403 (12%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
+Y +I C + + +LR + K +S D + Y +I G C ++ AYE E
Sbjct: 168 VSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSE 227
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M K I P T +SLI C + EA+ L +EM+ PD TF L+ A C EG+
Sbjct: 228 MITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 287
Query: 158 FSKAFHMHHQMIHKGVLPDFVT------GF----------SPALFTYNAIIHGLCFLGRV 201
+A M+ +GV+PD VT G+ +P +Y+ +I+G C + V
Sbjct: 288 IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLYIISRMRVAPNARSYSIVINGFCKIKMV 347
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
++AL + M ++PD V+Y +I G C++ + A+EL EM
Sbjct: 348 DKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDS------------ 395
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+D TY SLI+A C + K + L ++ +G D ++LI+GL K+ R K
Sbjct: 396 --GQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLK 453
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
D + +I+ L+ N + ++ + GL+NEA
Sbjct: 454 DAQ------------------VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLS 495
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
M + PD +I +A + EM+ G +
Sbjct: 496 KMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 538
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 199/427 (46%), Gaps = 47/427 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ ++ + + +I +C + ++ I + + G P+ ++ ++ GFC N +A
Sbjct: 93 IKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEAL 152
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G + +Y +LI LC A + +++ L D + ++T++
Sbjct: 153 HFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGL 212
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + A+ ++ +MI K + SP + T N++I+G C +G+ +EA G+LR M
Sbjct: 213 CKDKLVNDAYELYSEMITKRI--------SPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 264
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYE-LKVEMDRKVVWGLDEVTYAYLMQGL----- 266
++PD ++ I++ C+ ++++A + V M V+ D VTY+ LM G
Sbjct: 265 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMP--DVVTYSSLMDGYCLYII 322
Query: 267 ------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+ +Y+ +IN +C + K L+L EM + PD+V + LI+GL K R
Sbjct: 323 SRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI 382
Query: 321 KDTKAHLLLIIADYMYTSMPNYII-YDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAAR 378
++ ++ + + P II Y++LI+ C N+ + LVK +G+
Sbjct: 383 ----SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGI------ 432
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
+ D YN+LI C++ + A ++ +++ G+ +++ ++ L
Sbjct: 433 ----------QLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLC 482
Query: 439 DHGMYNE 445
G+ NE
Sbjct: 483 LEGLLNE 489
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 42/314 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I + T N +I +C++ + ++ G+LR M K ++PD ++ ++ C
Sbjct: 230 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 289
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A M ++G++PD TYSSL+ C ++ M P+ +++ +++
Sbjct: 290 EAKSGIAVMMKEGVMPDVVTYSSLMDGYC--------LYIISRMRVAPNARSYSIVINGF 341
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C KA + ++M + + PD V TYN++I GLC GR+ A ++ M
Sbjct: 342 CKIKMVDKALSLFYEMRCRRIAPDTV--------TYNSLIDGLCKSGRISYAWELVDEMR 393
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED-- 270
+ G D ++Y +I C+N + KA L ++ + + LD TY L+ GL +
Sbjct: 394 DSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQ-LDMYTYNILIDGLCKQGRL 452
Query: 271 --------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
TY +IN C +G L + TL +M G +PD+V +
Sbjct: 453 KDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETI 512
Query: 311 INGL---DKKARTK 321
I L DK R +
Sbjct: 513 IRALFENDKNERAE 526
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 41/352 (11%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+++ GI P+ + S LI C ++ A+ +F ++L P+ IT TTL+ CL
Sbjct: 87 QLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNH 146
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ +A H H ++ GF +Y +I+GLC +G AL +LR + +
Sbjct: 147 KVKEALHFHDHVL--------ALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLV 198
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
S D V Y +I G C+++ + AYEL EM K + T SLI
Sbjct: 199 STDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRIS--------------PTVVTLNSLI 244
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
YC G+ + L EM K PD ++L++ L K+ + K+ K+ + +++ + +
Sbjct: 245 YGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGV- 303
Query: 337 TSMPNYIIYDTLIEN-----------CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE 385
MP+ + Y +L++ N S+V + F +V++A M
Sbjct: 304 --MPDVVTYSSLMDGYCLYIISRMRVAPNARSYSIV--INGFCKIKMVDKALSLFYEMRC 359
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
PD YN LI C+ + A+ + EM G + + + +L+ AL
Sbjct: 360 RRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDAL 411
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E + D+ TY+ ++ +CL ++ ++P+A SY VI GFC
Sbjct: 296 AVMMKEGVMPDVVTYSSLMDGYCLYI-----------ISRMRVAPNARSYSIVINGFCKI 344
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+ KA EM + I PD TY+SLI LC R+S A+ L EM P D IT+
Sbjct: 345 KMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITY 404
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ A C KA + ++ +G+ D ++TYN +I GLC GR+++A
Sbjct: 405 NSLIDALCKNHHVDKAIALVKKIKDQGIQLD--------MYTYNILIDGLCKQGRLKDAQ 456
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
I + + G + +Y I+I+G C L +A L +M+ D VT +++
Sbjct: 457 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVP-DAVTCETIIRA 515
Query: 266 LSDED 270
L + D
Sbjct: 516 LFEND 520
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I D TYN +I C R+ ++ M + G D ++Y +I C N KA
Sbjct: 362 IAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAI 421
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHAC 152
++ +GI D +TY+ LI LC + RL +A +FQ++L ++ T+T +++
Sbjct: 422 ALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGL 481
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CLEG ++A + +M G +PD VT II L + E A +LR M
Sbjct: 482 CLEGLLNEAETLLSKMEDNGCVPDAVTC--------ETIIRALFENDKNERAEKLLREMI 533
Query: 213 EMGL 216
GL
Sbjct: 534 ARGL 537
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ D+ TYN +I C R++ I + + KG + +Y +I G C +
Sbjct: 430 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNE 489
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G +PDA T ++I+AL + A L +EM++
Sbjct: 490 AETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIA 534
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 196/441 (44%), Gaps = 45/441 (10%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L + + + F+ + IQ D+ T + +I C + ++ IL +
Sbjct: 57 FNKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILGKIL 116
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P+ ++ +I G C N KA F ++ KG + +Y +LI LC
Sbjct: 117 KLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETR 176
Query: 128 EAYHLFQE----MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
A L ++ +L PD I +T ++ + C + A+ ++ +MI K + P+ V
Sbjct: 177 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV----- 231
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
T+N++I+G C +G+ EEA+G+ M +P+ ++ I++ G C+ E+++A +
Sbjct: 232 ---TFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVL 288
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
M ++ V D TY SL++ Y E+ K + D ++ +G P+
Sbjct: 289 TVMIKQHVE--------------PDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPN 334
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG 362
S++INGL + K ++L + + PN I Y++LI+ C + V
Sbjct: 335 VRSYSVMINGL---CKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWY 391
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ ++ L KPD Y++LI C+ + A+ + EM G
Sbjct: 392 LIDEMQIKDL--------------GVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRG 437
Query: 423 FVSHMFSVLALLTAL-RDHGM 442
+++ + +L+ L ++H +
Sbjct: 438 QPANVVTYTSLIDGLCKNHNL 458
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 171/361 (47%), Gaps = 44/361 (12%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A F +M+ KGI PD FT S LI C +++ A+ + ++L P+ +T TTL+
Sbjct: 73 AISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILGKILKLGYEPNTVTLTTLIK 132
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
CL GE KA + H+ +I KG + V+ Y +I+GLC G AL +LR
Sbjct: 133 GLCLNGEVRKALYFHNDVIAKGFYLNEVS--------YGTLINGLCKSGETRAALQLLRK 184
Query: 211 MPEMGL-SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ + L PD + Y +I FC+++ + AY+L EM K ++ +
Sbjct: 185 IEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIY--------------PNV 230
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
T+ SLI +C G+ + + L +EM K + P+ ++L++GL K+ K K+ L +
Sbjct: 231 VTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTV 290
Query: 330 IIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
+I ++ P+ + Y++L++ LVK VN+A DT+
Sbjct: 291 MIKQHV---EPDVVTYNSLMDG---------YFLVKE------VNKATYVFDTLARRGVT 332
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWV 449
P+ Y+++I C+ V +A ++ EM + + +L+ L G ++ ++
Sbjct: 333 PNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYL 392
Query: 450 I 450
I
Sbjct: 393 I 393
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 162/380 (42%), Gaps = 51/380 (13%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGL---SPDALSYRYVITGFCNNRCPGKAYEF 97
+Y +I C + +LR + +GL PD + Y +I FC ++ AY+
Sbjct: 160 VSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL 217
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCL 154
EM K I P+ T++SLI C + EA LF EM+ + P+ TF L+ C
Sbjct: 218 YSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCK 277
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
EGE +A + MI + V PD V TYN+++ G + V +A + +
Sbjct: 278 EGEVKRAKSVLTVMIKQHVEPDVV--------TYNSLMDGYFLVKEVNKATYVFDTLARR 329
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G++P+ SY ++I+G C+ + + +A L EM K + + TY S
Sbjct: 330 GVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSL--------------TPNTITYNS 375
Query: 275 LINAYCAQGELFKVLTLDDEMSHK--GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
LI+ C G + V L DEM K G PD S+LI+ L K R D A
Sbjct: 376 LIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIAD---------A 426
Query: 333 DYMYTSM------PNYIIYDTLIEN-CSNNEFKSVVGL---VKSFSMRGLVNEAARAHDT 382
Y+ M N + Y +LI+ C N+ + L +K + V D
Sbjct: 427 WYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDR 486
Query: 383 MLEGNYKPDGAVYNLLIFDH 402
+ + D V+N LI +
Sbjct: 487 LCKSGRIADACVWNWLIMER 506
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 15/212 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ TYN ++ + L++ V K + +A +G++P+ SY +I G C + +
Sbjct: 294 QHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDE 353
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-----SPPDDITFTTL 148
A EM K + P+ TY+SLI LC R+S+ ++L EM PD T++ L
Sbjct: 354 AVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSIL 413
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA-LFTYNAIIHGLCFLGRVEEALGI 207
+ C G + A+++ +M +G PA + TY ++I GLC +++A+ +
Sbjct: 414 IDRLCKSGRIADAWYLIDEMHDRG---------QPANVVTYTSLIDGLCKNHNLDKAIAL 464
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
M ++G+ P+ +Y I+I C++ + A
Sbjct: 465 FTKMKDLGVEPNVYTYNILIDRLCKSGRIADA 496
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 136/295 (46%), Gaps = 29/295 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I ++ T+N +I C++ + E+ VG+ M K +P+ ++ ++ G C +
Sbjct: 224 KKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKR 283
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A M ++ + PD TY+SL+ + +++A ++F + P+ +++ +++
Sbjct: 284 AKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMIN 343
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +A + +M K + P+ + TYN++I GLC GR+ + ++
Sbjct: 344 GLCKVKMVDEAVILFKEMHSKSLTPNTI--------TYNSLIDGLCKSGRISDVWYLIDE 395
Query: 211 M--PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLS 267
M ++G+ PD +Y I+I C++ + A+ L EM DR +
Sbjct: 396 MQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDR---------------GQPA 440
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+ TY SLI+ C L K + L +M G P+ ++LI+ L K R D
Sbjct: 441 NVVTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIAD 495
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 50/324 (15%)
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
F ++ + F+ A QM KG+ PD +FT + +I+ C LG++ A
Sbjct: 57 FNKILSSLAKLNHFNIAISFSQQMELKGIQPD--------IFTLSILINCFCQLGQINFA 108
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
IL + ++G P+ V+ +I G C N E+RKA ++ K + L+EV
Sbjct: 109 FSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFY-LNEV------- 160
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL---PDSVIDSLLINGLDKKARTK 321
+Y +LIN C GE L L ++ +G L PD ++ + +I+ K
Sbjct: 161 ------SYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVI 212
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGL------------VKSFS 368
D +I +Y PN + +++LI C +F+ VGL V +F+
Sbjct: 213 DAYDLYSEMIVKKIY---PNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFN 269
Query: 369 M-------RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
+ G V A M++ + +PD YN L+ + V+KA ++ + R
Sbjct: 270 ILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARR 329
Query: 422 GFVSHMFSVLALLTALRDHGMYNE 445
G ++ S ++ L M +E
Sbjct: 330 GVTPNVRSYSVMINGLCKVKMVDE 353
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 47/295 (15%)
Query: 159 SKAFHMHHQMIHKGVLPDF-------VTGF--------SPALFTYNAIIHGLCFLGRVEE 203
++ + H+ +H LP F V+ F + +F +N I+ L L
Sbjct: 13 TRNLFLLHRRLHIQPLPSFIHNVDDVVSSFNRILNINPTQPIFEFNKILSSLAKLNHFNI 72
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A+ + M G+ PD + I+I+ FCQ ++ A+ + ++ K+ + + VT L+
Sbjct: 73 AISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILGKI-LKLGYEPNTVTLTTLI 131
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
+GL C GE+ K L +++ KG + V LINGL K T+
Sbjct: 132 KGL-------------CLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETRAA 178
Query: 324 KA------HLLLIIADY-MYTSMPNYIIYDTLI--------ENCSNNEFKSVV---GLVK 365
LLL+ D MYT++ + D L+ E + +VV L+
Sbjct: 179 LQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIY 238
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
F + G EA + M+ N P+ +N+L+ C+ V +A ++ M++
Sbjct: 239 GFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIK 293
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 191/445 (42%), Gaps = 61/445 (13%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L + + + F+ + IQ D+ T + +I C + ++ IL +
Sbjct: 58 FNKILSSLAKLNHFNIAISFSQQMELKPIQPDIFTLSILINCFCHLNQLNYAFSILGKIL 117
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P+ ++ +I G C N KA F ++ KG + +Y +LI LC
Sbjct: 118 KLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETK 177
Query: 128 EAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
A L +++ L PD + + T++ + C + S + ++ +MI K + PD +
Sbjct: 178 AALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAI------ 231
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
TYN +I+G LG+++EA+G+L M ++P+ ++ I+I C++ E++KA +
Sbjct: 232 --TYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLA 289
Query: 245 EMDRKVVWGLDEVTYAYLMQGLS----------------------DEDTYASLINAYCAQ 282
M ++ V + TY+ LM G D +Y+ +IN +C
Sbjct: 290 VMIKQGVEP-NIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKN 348
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMP 340
+ + + L EM K +P++V + LI+GL K R D + D M+
Sbjct: 349 KMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFI-----DEMHDRGQPA 403
Query: 341 NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL-------------------VNEAARAH 380
N I Y +L++ C N++ + L+ +G+ + +A +
Sbjct: 404 NIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVY 463
Query: 381 DTMLEGNYKPDGAVYNLLIFDHCRR 405
+L Y D +Y ++I C+
Sbjct: 464 QVLLNNTYHLDARIYTVMINGLCKE 488
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 188/443 (42%), Gaps = 77/443 (17%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + T +IK CL V K + + KG + +SY +I G C + A
Sbjct: 122 EPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAALS 181
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
+++ + PD Y+++I +LC + +S+ Y L+ EM+ PD IT+ TL++
Sbjct: 182 LLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFS 241
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALF 186
+ G+ +A + ++M K V P+ T G P +
Sbjct: 242 ILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIA 301
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TY++++ G + V +A + + G++ D SY ++I+GFC+N+ + +A L EM
Sbjct: 302 TYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEM 361
Query: 247 DRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGE 284
K + + VTY L+ GL ++ TY+SL++ C +
Sbjct: 362 HSKNMVP-NTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQ 420
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ K +TL ++ ++G D ++L++GL K + +D + +
Sbjct: 421 VDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQE------------------V 462
Query: 345 YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI---FD 401
Y L+ N + + + ++ G +EA M + PDG Y ++I F+
Sbjct: 463 YQVLLNNTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFE 522
Query: 402 HCRRLNVHKAYNMYMEMVRYGFV 424
+ R KA + EM+ G +
Sbjct: 523 NNRN---DKAVKLIREMIARGLL 542
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 34/311 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D TYN +I ++ ++++ VG+L M K ++P+ ++ +I C + K
Sbjct: 224 KKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKK 283
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A M ++G+ P+ TYSSL+ S + +++A ++F + D +++ +++
Sbjct: 284 ARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMIN 343
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C +A ++ +M K ++P+ V TYN++I GLC LGR+ +A +
Sbjct: 344 GFCKNKMVDEAVNLFKEMHSKNMVPNTV--------TYNSLIDGLCKLGRMSDAWDFIDE 395
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS--- 267
M + G + ++Y ++ G C+N ++ KA L ++ + + LD TY L+ GL
Sbjct: 396 MHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQ-LDIYTYTILVDGLCKNG 454
Query: 268 -------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D Y +IN C +G + L+L +M G PD V
Sbjct: 455 KLRDAQEVYQVLLNNTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYE 514
Query: 309 LLINGLDKKAR 319
++I L + R
Sbjct: 515 IIIRALFENNR 525
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 30/243 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ATY+ ++ ++ V K + +A +G++ D SY +I GFC N+ +
Sbjct: 294 QGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDE 353
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A EM K ++P+ TY+SLI LC R+S+A+ EM P + IT+++L+
Sbjct: 354 AVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLD 413
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
C + KA + ++ ++G+ D T +
Sbjct: 414 GLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHL 473
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
Y +I+GLC G +EAL +L M + G +PD V+Y I+I +N KA +L
Sbjct: 474 DARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAVKLI 533
Query: 244 VEM 246
EM
Sbjct: 534 REM 536
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+++ + TYN +I C + R+ + M ++G + ++Y ++ G C N
Sbjct: 363 SKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVD 422
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
KA ++ +GI D +TY+ L+ LC +L +A ++Q +L+ D +T ++
Sbjct: 423 KAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMI 482
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C EG F +A + +M G PD V TY II L R ++A+ ++R
Sbjct: 483 NGLCKEGFFDEALSLLSKMEDNGCTPDGV--------TYEIIIRALFENNRNDKAVKLIR 534
Query: 210 GMPEMGL 216
M GL
Sbjct: 535 EMIARGL 541
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 136/326 (41%), Gaps = 53/326 (16%)
Query: 166 HQMIHKGVLPDFVTGFSPALFTYNAIIH----------------GLCFLGRVEEALGILR 209
H+ +H LP F+ + A+ ++N I+H L L A+ +
Sbjct: 20 HRRLHIQPLPSFIDNVNDAVSSFNRILHMKNPTPPIFEFNKILSSLAKLNHFNIAISFSQ 79
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M + PD + I+I+ FC +L A+ + ++ K+ + + VT L++GL
Sbjct: 80 QMELKPIQPDIFTLSILINCFCHLNQLNYAFSILGKI-LKLGYEPNTVTLTTLIKGL--- 135
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
C GE+ K L +++ KG + V LINGL ++ +TKA L L
Sbjct: 136 ----------CLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGL---CKSGETKAALSL 182
Query: 330 IIADYMYTSMPNYIIYDTLIENCSNNEFKS---------VVG-----------LVKSFSM 369
+ P+ ++Y+T+I++ ++ S +V L+ FS+
Sbjct: 183 LRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSI 242
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
G + EA + M N P+ +++LI C+ V KA N+ M++ G ++ +
Sbjct: 243 LGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIAT 302
Query: 430 VLALLTALRDHGMYNERSWVIQNTLR 455
+L+ N+ ++V R
Sbjct: 303 YSSLMDGCFSVKEVNKATYVFNTIAR 328
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 185/434 (42%), Gaps = 54/434 (12%)
Query: 3 LLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLAT-----YNKIIKQHCLMQRVE 57
LLRD FTA +++ +CR + ++ + YN +I + + R E
Sbjct: 297 LLRD-FTADALIQGYLMHG--LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFE 353
Query: 58 KGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
+ +L + M G PDA ++ +I G C A EF EM +KG P+ TY+ L
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 117 IQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
I C + EA + M + + + + L+ A C +G+ A M+ +M KG
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
PD ++T+N++I+GLC ++EEALG+ R M G+ + V+Y +I F +
Sbjct: 474 KPD--------IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRL 525
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
+++A +L EM R LD +TY LI A C G K L L +
Sbjct: 526 ELIQQADKLVGEM-RFRGCPLDNITYN-------------GLIKALCKTGATEKCLGLIE 571
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-C 352
+M + P ++LIN + + D L +I + P+ + Y++LI C
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL---TPDIVTYNSLINGLC 628
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
F+ + L +G+ PD YN LI +C + A
Sbjct: 629 KMGRFQEALNLFNGLQAKGI----------------HPDAVTYNTLISRYCYEGLFNDAC 672
Query: 413 NMYMEMVRYGFVSH 426
+ + V GF+ +
Sbjct: 673 QLLFKGVSNGFIPN 686
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 185/463 (39%), Gaps = 70/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I + T+ ++K C++ V+ +LR M + G P+++ Y+ +I N
Sbjct: 193 SRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVN 252
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A + EM G PD T++ +I LC R+ EA L ML D + LM
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 150 HACCLEGEFSKAFHM-----------HHQMIHKGVLPD-------------FVTGFSPAL 185
H C G+ +A M ++ +I+ V+ + GF P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FT+N +I GLC G + AL L M + G P+ ++Y I+I GFC+ +A ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
M K GLS + Y LI A C G++ L + EMS KG PD
Sbjct: 433 MSAK---------------GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLI-------------- 349
+ LI GL K + ++ L + D + + N + Y+TLI
Sbjct: 478 YTFNSLIYGLCKNDKMEEA----LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 350 -------ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
C + + GL+K+ G + + M P N+LI
Sbjct: 534 LVGEMRFRGCPLDNI-TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
CR V+ A +M++ G + + +L+ L G + E
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 141/336 (41%), Gaps = 60/336 (17%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY +I C E+ ++ M+ KGLS + + Y +I C +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---------------- 137
A + EM KG PD +T++SLI LC ++ EA L+++ML
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 138 ----------------------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
P D+IT+ L+ A C G K + QM + +
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF- 579
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ + N +I+ C G+V +AL LR M + GL+PD V+Y +I+G C+
Sbjct: 580 -------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
++A L + K + D TY +LI+ YC +G L +
Sbjct: 633 FQEALNLFNGLQAKGIH--------------PDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
G +P+ + S+LIN KK + ++ + I+
Sbjct: 679 VSNGFIPNEITWSILINYFVKKHQRDNSDSEQFTIL 714
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 171/414 (41%), Gaps = 50/414 (12%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
P SY V+ CP A +M +GI P +T+ +++A C + A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 131 HLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
L ++M P+ I + L+HA ++A + +M F+ G P + T
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM--------FLMGCEPDVQT 272
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
+N +IHGLC GR+ EA + M + DA+ ++ G C+ ++ +A + ++
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 248 RKVVWGLDEVTYAYLMQGLSDED------------------TYASLINAYCAQGELFKVL 289
+ + Y++ G +E T+ +I+ C +G L L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTL 348
DEM KG P+ + ++LI+G K+ ++ A + SM + +T+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE---------ASKVVNSMSAKGLSLNTV 443
Query: 349 IENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
NC L+ + G + +A + + M KPD +N LI+ C+ +
Sbjct: 444 GYNC----------LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493
Query: 409 HKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNERSWVIQNTLRSCNLND 461
+A +Y +M+ G +++ + L+ A LR + V + R C L++
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 46/389 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
YN +I + + R E+ +L + M G PDA ++ +I G C A EF EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEF 158
+KG P+ TY+ LI C + EA + M + + + + L+ A C +G+
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A M+ +M KG PD ++T+N++I+GLC ++EEALG+ R M G+
Sbjct: 459 QDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
+ V+Y +I F + +++A +L EM R LD +TY LI A
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYN-------------GLIKA 556
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C G K L L ++M + P ++LIN + + D L +I +
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL--- 613
Query: 339 MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ + Y++LI C F+ + L +G+ PD YN
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI----------------HPDAVTYNT 657
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
LI +C + A + + V GF+ +
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPN 686
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 185/463 (39%), Gaps = 70/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I + T+ ++K C++ V+ +LR M + G P+++ Y+ +I N
Sbjct: 193 SRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVN 252
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A + EM G PD T++ +I LC R+ EA L ML D + LM
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 150 HACCLEGEFSKAFHM-----------HHQMIHKGVLPD-------------FVTGFSPAL 185
H C G+ +A M ++ +I+ V+ + GF P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FT+N +I GLC G + AL L M + G P+ ++Y I+I GFC+ +A ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
M K GLS + Y LI A C G++ L + EMS KG PD
Sbjct: 433 MSAK---------------GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLI-------------- 349
+ LI GL K + ++ L + D + + N + Y+TLI
Sbjct: 478 YTFNSLIYGLCKNDKMEEA----LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 350 -------ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
C + + GL+K+ G + + M P N+LI
Sbjct: 534 LVGEMRFRGCPLDNI-TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
CR V+ A +M++ G + + +L+ L G + E
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 60/322 (18%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY +I C E+ ++ M+ KGLS + + Y +I C +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---------------- 137
A + EM KG PD +T++SLI LC ++ EA L+++ML
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 138 ----------------------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
P D+IT+ L+ A C G K + QM + +
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF- 579
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ + N +I+ C G+V +AL LR M + GL+PD V+Y +I+G C+
Sbjct: 580 -------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
++A L + K + D TY +LI+ YC +G L +
Sbjct: 633 FQEALNLFNGLQAKGIH--------------PDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 296 SHKGSLPDSVIDSLLINGLDKK 317
G +P+ + S+LIN KK
Sbjct: 679 VSNGFIPNEITWSILINYFVKK 700
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 16/238 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + D+ T+N +I C ++E+ +G+ R M +G+ + ++Y +I F
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + EM +G D TY+ LI+ALC + L ++M P + L
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+++ C G+ + A MI +G+ PD VT YN++I+GLC +GR +EAL +
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVT--------YNSLINGLCKMGRFQEALNLF 640
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQ 264
G+ G+ PDAV+Y +IS +C A +L + + V G +E+T++ L+
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL---LFKGVSNGFIPNEITWSILIN 695
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 173/432 (40%), Gaps = 86/432 (19%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT------------------ 112
P SY V+ CP A +M +GI P +T
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 113 -----------------YSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
Y LI AL R++EA L +EM PD TF ++H
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPD-FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G +A +H +M+ + D + G+ ++HGLC +G+V+EA +L +
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGY---------LMHGLCRMGKVDEARAMLSKI 331
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
P +P+ V Y +I+G+ + +A +L + V+ G + D T
Sbjct: 332 P----NPNTVLYNTLINGYVVSGRFEEAKDLLYK--NMVIAGFE-----------PDAFT 374
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+ +I+ C +G L L DEM KG P+ + ++LI+G K+ ++
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE--------- 425
Query: 332 ADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A + SM + +T+ NC L+ + G + +A + + M KP
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNC----------LIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNERSWV 449
D +N LI+ C+ + +A +Y +M+ G +++ + L+ A LR + V
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 450 IQNTLRSCNLND 461
+ R C L++
Sbjct: 536 GEMRFRGCPLDN 547
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ D+ TYN +I C M R ++ + + G+ KG+ PDA++Y +I+ +C
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
A + + G +P+ T+S LI K +
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 46/389 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
YN +I + + R E+ +L + M G PDA ++ +I G C A EF EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEF 158
+KG P+ TY+ LI C + EA + M + + + + L+ A C +G+
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A M+ +M KG PD ++T+N++I+GLC ++EEALG+ R M G+
Sbjct: 459 QDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
+ V+Y +I F + +++A +L EM R LD +TY LI A
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYN-------------GLIKA 556
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C G K L L ++M + P ++LIN + + D L +I +
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL--- 613
Query: 339 MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ + Y++LI C F+ + L +G+ PD YN
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI----------------HPDAVTYNT 657
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
LI +C + A + + V GF+ +
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPN 686
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 185/463 (39%), Gaps = 70/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I + T+ ++K C++ V+ +LR M + G P+++ Y+ +I N
Sbjct: 193 SRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVN 252
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A + EM G PD T++ +I LC R+ EA L ML D + LM
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 150 HACCLEGEFSKAFHM-----------HHQMIHKGVLPD-------------FVTGFSPAL 185
H C G+ +A M ++ +I+ V+ + GF P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FT+N +I GLC G + AL L M + G P+ ++Y I+I GFC+ +A ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
M K GLS + Y LI A C G++ L + EMS KG PD
Sbjct: 433 MSAK---------------GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLI-------------- 349
+ LI GL K + ++ L + D + + N + Y+TLI
Sbjct: 478 YTFNSLIYGLCKNDKMEEA----LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 350 -------ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
C + + GL+K+ G + + M P N+LI
Sbjct: 534 LVGEMRFRGCPLDNI-TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
CR V+ A +M++ G + + +L+ L G + E
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 60/322 (18%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY +I C E+ ++ M+ KGLS + + Y +I C +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---------------- 137
A + EM KG PD +T++SLI LC ++ EA L+++ML
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 138 ----------------------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
P D+IT+ L+ A C G K + QM + +
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF- 579
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ + N +I+ C G+V +AL LR M + GL+PD V+Y +I+G C+
Sbjct: 580 -------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
++A L + K + D TY +LI+ YC +G L +
Sbjct: 633 FQEALNLFNGLQAKGIH--------------PDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 296 SHKGSLPDSVIDSLLINGLDKK 317
G +P+ + S+LIN KK
Sbjct: 679 VSNGFIPNEITWSILINYFVKK 700
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 16/238 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + D+ T+N +I C ++E+ +G+ R M +G+ + ++Y +I F
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + EM +G D TY+ LI+ALC + L ++M P + L
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+++ C G+ + A MI +G+ PD VT YN++I+GLC +GR +EAL +
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVT--------YNSLINGLCKMGRFQEALNLF 640
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQ 264
G+ G+ PDAV+Y +IS +C A +L + + V G +E+T++ L+
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL---LFKGVSNGFIPNEITWSILIN 695
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 173/432 (40%), Gaps = 86/432 (19%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT------------------ 112
P SY V+ CP A +M +GI P +T
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 113 -----------------YSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
Y LI AL R++EA L +EM PD TF ++H
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPD-FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G +A +H +M+ + D + G+ ++HGLC +G+V+EA +L +
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGY---------LMHGLCRMGKVDEARAMLSKI 331
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
P +P+ V Y +I+G+ + +A +L + V+ G + D T
Sbjct: 332 P----NPNTVLYNTLINGYVVSGRFEEAKDLLYK--NMVIAGFE-----------PDAFT 374
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+ +I+ C +G L L DEM KG P+ + ++LI+G K+ ++
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE--------- 425
Query: 332 ADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A + SM + +T+ NC L+ + G + +A + + M KP
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNC----------LIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNERSWV 449
D +N LI+ C+ + +A +Y +M+ G +++ + L+ A LR + V
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 450 IQNTLRSCNLND 461
+ R C L++
Sbjct: 536 GEMRFRGCPLDN 547
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ D+ TYN +I C M R ++ + + G+ KG+ PDA++Y +I+ +C
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
A + + G +P+ T+S LI K +
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 46/389 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
YN +I + + R E+ +L + M G PDA ++ +I G C A EF EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEF 158
+KG P+ TY+ LI C + EA + M + + + + L+ A C +G+
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A M+ +M KG PD ++T+N++I+GLC ++EEALG+ R M G+
Sbjct: 459 QDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
+ V+Y +I F + +++A +L EM R LD +TY LI A
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYN-------------GLIKA 556
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C G K L L ++M + P ++LIN + + D L +I +
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL--- 613
Query: 339 MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ + Y++LI C F+ + L +G+ PD YN
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI----------------HPDAVTYNT 657
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
LI +C + A + + V GF+ +
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPN 686
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 185/463 (39%), Gaps = 70/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I + T+ ++K C++ V+ +LR M + G P+++ Y+ +I N
Sbjct: 193 SRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVN 252
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A + EM G PD T++ +I LC R+ EA L ML D + LM
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 150 HACCLEGEFSKAFHM-----------HHQMIHKGVLPD-------------FVTGFSPAL 185
H C G+ +A M ++ +I+ V+ + GF P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FT+N +I GLC G + AL L M + G P+ ++Y I+I GFC+ +A ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
M K GLS + Y LI A C G++ L + EMS KG PD
Sbjct: 433 MSAK---------------GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLI-------------- 349
+ LI GL K + ++ L + D + + N + Y+TLI
Sbjct: 478 YTFNSLIYGLCKNDKMEEA----LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 350 -------ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
C + + GL+K+ G + + M P N+LI
Sbjct: 534 LVGEMRFRGCPLDNI-TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
CR V+ A +M++ G + + +L+ L G + E
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 60/322 (18%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY +I C E+ ++ M+ KGLS + + Y +I C +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---------------- 137
A + EM KG PD +T++SLI LC ++ EA L+++ML
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 138 ----------------------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
P D+IT+ L+ A C G K + QM + +
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF- 579
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ + N +I+ C G+V +AL LR M + GL+PD V+Y +I+G C+
Sbjct: 580 -------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
++A L + K + D TY +LI+ YC +G L +
Sbjct: 633 FQEALNLFNGLQAKGIH--------------PDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 296 SHKGSLPDSVIDSLLINGLDKK 317
G +P+ + S+LIN KK
Sbjct: 679 VSNGFIPNEITWSILINYFVKK 700
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 16/238 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + D+ T+N +I C ++E+ +G+ R M +G+ + ++Y +I F
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + EM +G D TY+ LI+ALC + L ++M P + L
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+++ C G+ + A MI +G+ PD VT YN++I+GLC +GR +EAL +
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVT--------YNSLINGLCKMGRFQEALNLF 640
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQ 264
G+ G+ PDAV+Y +IS +C A +L + + V G +E+T++ L+
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL---LFKGVSNGFIPNEITWSILIN 695
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 173/432 (40%), Gaps = 86/432 (19%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT------------------ 112
P SY V+ CP A +M +GI P +T
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 113 -----------------YSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
Y LI AL R++EA L +EM PD TF ++H
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPD-FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G +A +H +M+ + D + G+ ++HGLC +G+V+EA +L +
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGY---------LMHGLCRMGKVDEARAMLSKI 331
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
P +P+ V Y +I+G+ + +A +L + V+ G + D T
Sbjct: 332 P----NPNTVLYNTLINGYVVSGRFEEAKDLLYK--NMVIAGFE-----------PDAFT 374
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+ +I+ C +G L L DEM KG P+ + ++LI+G K+ ++
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE--------- 425
Query: 332 ADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A + SM + +T+ NC L+ + G + +A + + M KP
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNC----------LIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNERSWV 449
D +N LI+ C+ + +A +Y +M+ G +++ + L+ A LR + V
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 450 IQNTLRSCNLND 461
+ R C L++
Sbjct: 536 GEMRFRGCPLDN 547
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ D+ TYN +I C M R ++ + + G+ KG+ PDA++Y +I+ +C
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
A + + G +P+ T+S LI K +
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 46/389 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
YN +I + + R E+ +L + M G PDA ++ +I G C A EF EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEF 158
+KG P+ TY+ LI C + EA + M + + + + L+ A C +G+
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A M+ +M KG PD ++T+N++I+GLC ++EEALG+ R M G+
Sbjct: 459 QDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
+ V+Y +I F + +++A +L EM R LD +TY LI A
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYN-------------GLIKA 556
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C G K L L ++M + P ++LIN + + D L +I +
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL--- 613
Query: 339 MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ + Y++LI C F+ + L +G+ PD YN
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI----------------HPDAVTYNT 657
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
LI +C + A + + V GF+ +
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPN 686
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 185/463 (39%), Gaps = 70/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I + T+ ++K C++ V+ +LR M + G P+++ Y+ +I N
Sbjct: 193 SRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVN 252
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A + EM G PD T++ +I LC R+ EA L ML D + LM
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 150 HACCLEGEFSKAFHM-----------HHQMIHKGVLPD-------------FVTGFSPAL 185
H C G+ +A M ++ +I+ V+ + GF P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FT+N +I GLC G + AL L M + G P+ ++Y I+I GFC+ +A ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
M K GLS + Y LI A C G++ L + EMS KG PD
Sbjct: 433 MSAK---------------GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLI-------------- 349
+ LI GL K + ++ L + D + + N + Y+TLI
Sbjct: 478 YTFNSLIYGLCKNDKMEEA----LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 350 -------ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
C + + GL+K+ G + + M P N+LI
Sbjct: 534 LVGEMRFRGCPLDNI-TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
CR V+ A +M++ G + + +L+ L G + E
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 60/322 (18%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY +I C E+ ++ M+ KGLS + + Y +I C +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---------------- 137
A + EM KG PD +T++SLI LC ++ EA L+++ML
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 138 ----------------------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
P D+IT+ L+ A C G K + QM + +
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF- 579
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ + N +I+ C G+V +AL LR M + GL+PD V+Y +I+G C+
Sbjct: 580 -------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
++A L + K + D TY +LI+ YC +G L +
Sbjct: 633 FQEALNLFNGLQAKGIH--------------PDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 296 SHKGSLPDSVIDSLLINGLDKK 317
G +P+ + S+LIN KK
Sbjct: 679 VSNGFIPNEITWSILINYFVKK 700
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 16/238 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + D+ T+N +I C ++E+ +G+ R M +G+ + ++Y +I F
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + EM +G D TY+ LI+ALC + L ++M P + L
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+++ C G+ + A MI +G+ PD VT YN++I+GLC +GR +EAL +
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVT--------YNSLINGLCKMGRFQEALNLF 640
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQ 264
G+ G+ PDAV+Y +IS +C A +L + + V G +E+T++ L+
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL---LFKGVSNGFIPNEITWSILIN 695
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 173/432 (40%), Gaps = 86/432 (19%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT------------------ 112
P SY V+ CP A +M +GI P +T
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 113 -----------------YSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
Y LI AL R++EA L +EM PD TF ++H
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPD-FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G +A +H +M+ + D + G+ ++HGLC +G+V+EA +L +
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGY---------LMHGLCRMGKVDEARAMLSKI 331
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
P +P+ V Y +I+G+ + +A +L + V+ G + D T
Sbjct: 332 P----NPNTVLYNTLINGYVVSGRFEEAKDLLYK--NMVIAGFE-----------PDAFT 374
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+ +I+ C +G L L DEM KG P+ + ++LI+G K+ ++
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE--------- 425
Query: 332 ADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A + SM + +T+ NC L+ + G + +A + + M KP
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNC----------LIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNERSWV 449
D +N LI+ C+ + +A +Y +M+ G +++ + L+ A LR + V
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 450 IQNTLRSCNLND 461
+ R C L++
Sbjct: 536 GEMRFRGCPLDN 547
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ D+ TYN +I C M R ++ + + G+ KG+ PDA++Y +I+ +C
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
A + + G +P+ T+S LI K +
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 46/389 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
YN +I + + R E+ +L + M G PDA ++ +I G C A EF EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEF 158
+KG P+ TY+ LI C + EA + M + + + + L+ A C +G+
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A M+ +M KG PD ++T+N++I+GLC ++EEALG+ R M G+
Sbjct: 459 QDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
+ V+Y +I F + +++A +L EM R LD +TY LI A
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYN-------------GLIKA 556
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C G K L L ++M + P ++LIN + + D L +I +
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL--- 613
Query: 339 MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ + Y++LI C F+ + L +G+ PD YN
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI----------------HPDAVTYNT 657
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
LI +C + A + + V GF+ +
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPN 686
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 185/463 (39%), Gaps = 70/463 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I + T+ ++K C++ V+ +LR M + G P+++ Y+ +I N
Sbjct: 193 SRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVN 252
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
+A + EM G PD T++ +I LC R+ EA L ML D + LM
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 150 HACCLEGEFSKAFHM-----------HHQMIHKGVLPD-------------FVTGFSPAL 185
H C G+ +A M ++ +I+ V+ + GF P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FT+N +I GLC G + AL L M + G P+ ++Y I+I GFC+ +A ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 246 MDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
M K GLS + Y LI A C G++ L + EMS KG PD
Sbjct: 433 MSAK---------------GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYDTLI-------------- 349
+ LI GL K + ++ L + D + + N + Y+TLI
Sbjct: 478 YTFNSLIYGLCKNDKMEEA----LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 350 -------ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
C + + GL+K+ G + + M P N+LI
Sbjct: 534 LVGEMRFRGCPLDNI-TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
CR V+ A +M++ G + + +L+ L G + E
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 60/322 (18%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY +I C E+ ++ M+ KGLS + + Y +I C +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---------------- 137
A + EM KG PD +T++SLI LC ++ EA L+++ML
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 138 ----------------------SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
P D+IT+ L+ A C G K + QM + +
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF- 579
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P++ + N +I+ C G+V +AL LR M + GL+PD V+Y +I+G C+
Sbjct: 580 -------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
++A L + K + D TY +LI+ YC +G L +
Sbjct: 633 FQEALNLFNGLQAKGIH--------------PDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 296 SHKGSLPDSVIDSLLINGLDKK 317
G +P+ + S+LIN KK
Sbjct: 679 VSNGFIPNEITWSILINYFVKK 700
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 16/238 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + D+ T+N +I C ++E+ +G+ R M +G+ + ++Y +I F
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A + EM +G D TY+ LI+ALC + L ++M P + L
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+++ C G+ + A MI +G+ PD VT YN++I+GLC +GR +EAL +
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVT--------YNSLINGLCKMGRFQEALNLF 640
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQ 264
G+ G+ PDAV+Y +IS +C A +L + + V G +E+T++ L+
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL---LFKGVSNGFIPNEITWSILIN 695
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 173/432 (40%), Gaps = 86/432 (19%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT------------------ 112
P SY V+ CP A +M +GI P +T
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 113 -----------------YSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHAC 152
Y LI AL R++EA L +EM PD TF ++H
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPD-FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C G +A +H +M+ + D + G+ ++HGLC +G+V+EA +L +
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGY---------LMHGLCRMGKVDEARAMLSKI 331
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
P +P+ V Y +I+G+ + +A +L + V+ G + D T
Sbjct: 332 P----NPNTVLYNTLINGYVVSGRFEEAKDLLYK--NMVIAGFE-----------PDAFT 374
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
+ +I+ C +G L L DEM KG P+ + ++LI+G K+ ++
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE--------- 425
Query: 332 ADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A + SM + +T+ NC L+ + G + +A + + M KP
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNC----------LIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDHGMYNERSWV 449
D +N LI+ C+ + +A +Y +M+ G +++ + L+ A LR + V
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 450 IQNTLRSCNLND 461
+ R C L++
Sbjct: 536 GEMRFRGCPLDN 547
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ D+ TYN +I C M R ++ + + G+ KG+ PDA++Y +I+ +C
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
A + + G +P+ T+S LI K +
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 161/371 (43%), Gaps = 61/371 (16%)
Query: 48 KQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGIL 107
+Q L QR + +LR + K L P+ + Y +I C ++ A++ EM K I
Sbjct: 216 EQGSLSQRAP--LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIF 273
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHM 164
PD TY++LI C +L +A LF +M S PD TF L+ A C EG +A +
Sbjct: 274 PDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNG 333
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
M+ +G+ PD V TYN+++ C + V +A I M G++ + SY
Sbjct: 334 LAMMMKQGIKPDVV--------TYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYS 385
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGE 284
I+I+ FC+ + + +A +L EM K Q + TY+SLI+ C G
Sbjct: 386 IMINRFCKIKMVDQAMKLFKEMHHK--------------QIFPNVITYSSLIDGLCKSGR 431
Query: 285 LFKVLTLDDEMSHKGSLPDSV----------------IDSLLINGLDKKARTKDTKAHLL 328
+ L L+DEM +G PD + ++LI+GL K R +D +
Sbjct: 432 ISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARN--- 488
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
I++ L+ N + ++ F +GL +EA M +
Sbjct: 489 ---------------IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533
Query: 389 KPDGAVYNLLI 399
P+ Y ++I
Sbjct: 534 IPNAVTYEIII 544
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TYN ++ ++CL+ V K I M+ +G++ + SY +I FC + +
Sbjct: 340 QGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQ 399
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSP---------- 139
A + EM K I P+ TYSSLI LC R+S A L EM P
Sbjct: 400 AMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLK 459
Query: 140 -----PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHG 194
P+ T+T L+ C G A ++ ++ V G++ + TY +IHG
Sbjct: 460 DQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLL--------VKGYNITVNTYTVMIHG 511
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
C G +EA+ +L M + P+AV+Y I+I N E KA
Sbjct: 512 FCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 47/284 (16%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I D+ TYN +I C++ +++ +G+ M + ++PD ++ ++ FC
Sbjct: 269 SKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 328
Query: 93 KAYEFKLEMDQKGILPDAFTYSSL-----------------------------------I 117
+A M ++GI PD TY+SL I
Sbjct: 329 EAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMI 388
Query: 118 QALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
C + + +A LF+EM P+ IT+++L+ C G S A ++ +M +G
Sbjct: 389 NRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQ 448
Query: 175 PDFVT--------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
PD +T G P +FTY +I GLC GR+E+A I + G + +Y ++
Sbjct: 449 PDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVM 508
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
I GFC +A L +M + VTY +++ L D D
Sbjct: 509 IHGFCNKGLFDEAMTLLSKMKDNCCIP-NAVTYEIIIRSLFDND 551
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
L +LR + L P+ V Y +I C+++ A++L EM K ++
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIF------------ 273
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
D +TY +LIN +C G+L + L ++M+ + PD ++L++ K+ R K+ K
Sbjct: 274 --PDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 331
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
L +++ + P+ + Y++L++ C NE VN+A +TM
Sbjct: 332 NGLAMMMKQGI---KPDVVTYNSLMDRYCLVNE----------------VNKAKSIFNTM 372
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+ Y+++I C+ V +A ++ EM ++ + +L+ L G
Sbjct: 373 SHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSG 430
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 174/400 (43%), Gaps = 43/400 (10%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +L+ + K + +A+ Y VI G C ++ A++
Sbjct: 167 DQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLY 226
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
EM KGI P+ TYS+LI +L +A LF +++ PD TF L+ C +
Sbjct: 227 SEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKD 286
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+ + + M+ +G++PD VT YN+++ G C + V A I M + G
Sbjct: 287 RKMKEGKTVFAMMMKQGIIPDVVT--------YNSLMDGYCLVKEVNTAKSIFNTMAQGG 338
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++PD SY I+I+GFC+ +++ KA L EM K + + + TY SL
Sbjct: 339 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNI--------------IPNVVTYNSL 384
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLP-----DSVIDSLLINGLDKKARTKDTKAHLLLI 330
I+ G + L L D+M +G P +S+ID+L +T + LI
Sbjct: 385 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF--------KTHQVDKAIALI 436
Query: 331 IADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVG----LVKSFSMRGLVNEAARAHDTMLE 385
P+ Y LI+ C + V ++ F +GL +EA M +
Sbjct: 437 TKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKD 496
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+ P+ Y + I KA ++ EM+ G ++
Sbjct: 497 SSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLN 536
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D+ TYN ++ +CL++ V I MA+ G++PD SY +I GFC + K
Sbjct: 302 QGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 361
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A EM K I+P+ TY+SLI L R+S A L +M PP+ +T+ +++
Sbjct: 362 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 421
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------GFSPALFTYNAIIHGLCFL 198
A + KA + + +G+ P T G+ + TYN +IHG C
Sbjct: 422 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKK 481
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
G +EAL +L M + P+AV+Y I I N E KA +L EM
Sbjct: 482 GLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 529
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+AT++ I+ + ++ + + + G P+ ++ +I G C +A+ F
Sbjct: 101 IATFSSIVSVNWVLSL---AFSVFAKILKMGYHPNTITLNTLIKGLCLKGQIHQAFLFHD 157
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLEG 156
++ G D +Y +LI LC A L Q + L + + + T+++ C +
Sbjct: 158 KLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDK 217
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ AF ++ +M+ KG+ SP + TY+A+I G +G++++A+ + + +
Sbjct: 218 HVNDAFDLYSEMVSKGI--------SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENI 269
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---------- 266
PD ++ I++ GFC++R++++ + M ++ + D VTY LM G
Sbjct: 270 KPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP-DVVTYNSLMDGYCLVKEVNTAK 328
Query: 267 ------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
D +Y LIN +C ++ K + L +EM K +P+ V + LI+GL
Sbjct: 329 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 388
Query: 315 DKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENC-SNNEFKSVVGLVKSFSMRG 371
K R L + D M+ PN + Y+++I+ ++ + L+ F +G
Sbjct: 389 SKSGRIS-----YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 443
Query: 372 LVNEAARAHDTMLEGNYKPDG-----AVYNLLIFDHCRR 405
+ + + +++G K +G YN++I C++
Sbjct: 444 -IQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKK 481
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 146/302 (48%), Gaps = 24/302 (7%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I ++ TY+ +I ++ +++ + + + + + PD ++ ++ GFC +R
Sbjct: 231 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 290
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+ M ++GI+PD TY+SL+ C + ++ A +F M PD ++ L+
Sbjct: 291 EGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 350
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C + KA ++ ++M K ++P+ V TYN++I GL GR+ AL ++
Sbjct: 351 NGFCKIKKVDKAMNLFNEMHCKNIIPNVV--------TYNSLIDGLSKSGRISYALQLVD 402
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M + G+ P+ ++Y +I + ++ KA L + + + TY L+ GL
Sbjct: 403 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP-SMYTYTILIDGLCKV 461
Query: 270 D-------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV-----IDSLLINGLDKK 317
+ TY +I+ +C +G + L+L +M +P++V I SLL N + K
Sbjct: 462 EGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDK 521
Query: 318 AR 319
A
Sbjct: 522 AE 523
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 50/353 (14%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A+EF +++ + T+SS++ LS A+ +F ++L P+ IT TL+
Sbjct: 85 AFEFNKILEELNLTYSIATFSSIVSV---NWVLSLAFSVFAKILKMGYHPNTITLNTLIK 141
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
CL+G+ +AF H +++ GF +Y +IHGLC +G AL +L+
Sbjct: 142 GLCLKGQIHQAFLFHDKLV--------ALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR 193
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + +AV Y VI G C+++ + A++L EM K G+S +
Sbjct: 194 VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK---------------GISPNV 238
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY++LI+ + G+L + L +++ + PD ++L++G K + K+ K +
Sbjct: 239 VTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAM 298
Query: 330 IIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
++ + +P+ + Y++L++ C LVK VN A +TM +G
Sbjct: 299 MMKQGI---IPDVVTYNSLMDGYC----------LVKE------VNTAKSIFNTMAQGGV 339
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
PD YN+LI C+ V KA N++ EM + ++ + +L+ L G
Sbjct: 340 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSG 392
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 172/402 (42%), Gaps = 43/402 (10%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +TY+K+I C +VEK + M G+ P +Y +I FC +A ++
Sbjct: 459 DDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWF 518
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
EM KG P+ TY++LI A +++ A LF+ ML P+ +T+T L+ C
Sbjct: 519 DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA 578
Query: 156 GEFSKAFHMHHQM--------IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
G+ KA ++ +M + K D P + TY A++ GLC RV+EA +
Sbjct: 579 GQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
L M G P+ + Y VI GFC+ +L+ A E+ +M + G Y
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER---GYSPNLY-------- 687
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
TY+S I+ L VL + +M P+ VI + +++GL K +T D L
Sbjct: 688 ---TYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT-DEAYKL 743
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+L + + PN + Y +I+ F G + + M
Sbjct: 744 MLKMEE--KGCNPNVVTYTAMID---------------GFGKSGKIEQCLELFRDMCSKG 786
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
P+ Y +LI C + +AY + EM + + H+ S
Sbjct: 787 CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILS 828
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 184/473 (38%), Gaps = 70/473 (14%)
Query: 11 TLKTFRHMVRNGVVCR--FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAE 68
TL F + + G CR F +E D YN+++ C E+ + IL M
Sbjct: 248 TLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRS 307
Query: 69 KGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSE 128
P+ ++YR +++G G+ M +G P+ ++SLI A C R S
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSY 367
Query: 129 AYHLFQEML-----------------------SPPDDI---------------------T 144
AY LF++M+ P DI
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVN 427
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+ C G+F +AF + +M+ KG +PD TY+ +I LC +VE+A
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDS--------TYSKVIGFLCDASKVEKA 479
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+ M G+ P +Y I+I FC+ +++A RK W DE+ +
Sbjct: 480 FSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA--------RK--W-FDEMLHKGCTP 528
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
+ TY +LI+AY ++ L + M +G P+ V + LI+G K + +
Sbjct: 529 NVV---TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC 585
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
+ D + M Y D NC + LV V EA DTML
Sbjct: 586 QIYARMRGDIESSDMDKYFKLDH--NNCEGPNVITYGALVDGLCKANRVKEAHELLDTML 643
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+P+ VY+ +I C+ + A ++ +M G+ ++++ + + L
Sbjct: 644 AHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 167/412 (40%), Gaps = 40/412 (9%)
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP 139
+++ C N A E + G P TY++LIQ +L AY + +EMLS
Sbjct: 181 FLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSY 240
Query: 140 P---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
D T + ++ C G+ +AF L D F P YN ++ GLC
Sbjct: 241 AFVMDRYTLSCFAYSLCKGGKCREAFD----------LIDEAEDFVPDTVFYNRMVSGLC 290
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
EEA+ IL M P+ V+Y I++SG + +L + + M + E
Sbjct: 291 EASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM-------ITE 343
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
Y + + + SLI+AYC + L +M G P ++ ++ I +
Sbjct: 344 GCYP-------NREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSV-- 394
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
++ + +L + + Y+ M + + + N SN + G ++A
Sbjct: 395 -CSNEEQPSSDILDLVEKAYSEMLDLGVVLNKV-NVSN--------FARCLCGAGKFDQA 444
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
+ M+ + PD + Y+ +I C V KA++++ EM R G V +++ L+ +
Sbjct: 445 FKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDS 504
Query: 437 LRDHGMYNE-RSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVL 487
G+ + R W + + C N +++ K P+ L +++
Sbjct: 505 FCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMM 556
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 24/247 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
S ++ Y +++ C + + ++ ++ M EKG +P+ ++Y +I GF + +
Sbjct: 716 SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQC 775
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP--PDDITFTTLMHAC 152
E +M KG P+ TY LI CS L EAY L EM P I L H
Sbjct: 776 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHI----LSHRK 831
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFS-PALFTYNAIIHGLCFLGRVEEALGILRGM 211
+EG FS+ F + G+L + S P Y +I GR+E AL +L
Sbjct: 832 IIEG-FSQEF-----ITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLE-- 883
Query: 212 PEMGLSPD-AVS----YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT-YAYLMQG 265
E+ SP AVS Y +I ++ KA EL M K V + E++ +L++G
Sbjct: 884 -EISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNV--VPELSILVHLIKG 940
Query: 266 LSDEDTY 272
L D +
Sbjct: 941 LIKVDKW 947
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 198/478 (41%), Gaps = 81/478 (16%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D Y K + +++ + K ++ M + G+ P Y V+ G C + A
Sbjct: 150 VRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDGIRPTTYVYNLVLGGLCKAKKIKDAR 209
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ EM Q+ ++P+ T+++LI C + EA+ L M P + +T+ L+
Sbjct: 210 KVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRLRARMNGPYSKANVVTYNCLLSGL 269
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF-----------------------TYN 189
C G A + +M KG LP GFS +F T N
Sbjct: 270 CGLGRLEDAKRVLLEMERKGFLP---RGFSSLVFDDQLMSGNENGLLNGNGTQVDEWTCN 326
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
A+++GLC +G+VE+A IL + G+ P VSY I+++ +CQ +L K EM+++
Sbjct: 327 ALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKR 386
Query: 250 VVWGLDE--VTYAYLM---------------------QGLSDE-DTYASLINAYCAQGEL 285
GL VT+ L+ +G+S +TY SLIN Y +
Sbjct: 387 ---GLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDF 443
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYII 344
+ + +E+ +KG P+ LIN L K + D + +++ D + + PN I
Sbjct: 444 VRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAE----IVLGDMVTRGVSPNADI 499
Query: 345 YDTLIE-NCSNNEFKSVV-------------------GLVKSFSMRGLVNEAARAHDTML 384
Y+ LIE +CS ++ K L+ G V EA M
Sbjct: 500 YNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMT 559
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
YKPD YN L+ + N K +Y M + G + + L+ + R G+
Sbjct: 560 RKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLINSCRKKGV 617
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 193/468 (41%), Gaps = 80/468 (17%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP------------ 73
R A N + ++ TYN ++ C + R+E +L M KG P
Sbjct: 245 RLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVFDDQL 304
Query: 74 ----------------DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLI 117
D + ++ G C KA E +++ G++P +Y+ L+
Sbjct: 305 MSGNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILV 364
Query: 118 QALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
A C K L++ +EM P +TF TL++ C G+ ++A +MI KGV
Sbjct: 365 NAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGV- 423
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
SP L TYN++I+G I + G+ P+ SY +I+ C++
Sbjct: 424 -------SPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDG 476
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDD 293
+L +D ++V G D VT +G+S + D Y LI A C+ + +
Sbjct: 477 KL---------LDAEIVLG-DMVT-----RGVSPNADIYNMLIEASCSLSKPKDAFRFLN 521
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI---- 349
EM G V + LING+ K R + + +L L + Y P+ I Y++L+
Sbjct: 522 EMIQNGIDATIVTYNTLINGIGKNGRVTEAE-NLFLHMTRKGYK--PDVITYNSLMSVYA 578
Query: 350 ------------ENCSNNEFKSVVG----LVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+N K +G L+ S +G+V + ML PD A
Sbjct: 579 MSGNPEKCLELYDNMKKRGIKPSIGTFHPLINSCRKKGVVT-MEKMFQEMLGMKLIPDRA 637
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-LRDH 440
VYN +I+ + NV KA +++ +MV G S + L+ A LRD
Sbjct: 638 VYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSDKVTYNCLILAHLRDQ 685
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 191/471 (40%), Gaps = 74/471 (15%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N Q D T N ++ C + +VEK IL + G+ P +SY ++ +C
Sbjct: 314 NGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDL 373
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
K EM+++G+ P T+++LI C L++A ++M+ P T+ +L
Sbjct: 374 NKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSL 433
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ + +F + F + ++ +KG+ P+ + +Y ++I+ LC G++ +A +L
Sbjct: 434 INGYGMTCDFVRCFEIFEEIENKGMKPN--------VKSYGSLINCLCKDGKLLDAEIVL 485
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE--VTYAYLMQGL 266
M G+SP+A Y ++I C + + A+ EM + G+D VTY L+ G+
Sbjct: 486 GDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEM---IQNGIDATIVTYNTLINGI 542
Query: 267 S----------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
D TY SL++ Y G K L L D M +G P
Sbjct: 543 GKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSI 602
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIEN-CSNNEF 357
LIN KK ++ + M+ M P+ +Y+ +I +
Sbjct: 603 GTFHPLINSCRKKG----------VVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNV 652
Query: 358 KSVVGLVKSFSMRGL-------------------VNEAARAHDTMLEGNYKPDGAVYNLL 398
+ L + +G+ V+E D M P Y +L
Sbjct: 653 LKAMSLHQQMVDQGIDSDKVTYNCLILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKIL 712
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWV 449
+ HC + + AY Y EM GF+ + L++ LR+ M +E V
Sbjct: 713 VKGHCDLKDFNGAYFWYREMFDSGFILNDCICSQLISGLREEEMLHEAEIV 763
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
RF I + TYN +I RV + + M KG PD ++Y +++ +
Sbjct: 518 RFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVY 577
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
+ P K E M ++GI P T+ LI + C K+ + +FQEML PD
Sbjct: 578 AMSGNPEKCLELYDNMKKRGIKPSIGTFHPLINS-CRKKGVVTMEKMFQEMLGMKLIPDR 636
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+ +++ +G KA +H QM+ +G+ D V TYN +I RV
Sbjct: 637 AVYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSDKV--------TYNCLILAHLRDQRVS 688
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAY 261
E IL M GL P A +Y I++ G C ++ AY EM D + L++ +
Sbjct: 689 EIKHILDDMKAKGLVPKADTYKILVKGHCDLKDFNGAYFWYREMFDSGFI--LNDCICSQ 746
Query: 262 LMQGLSDED 270
L+ GL +E+
Sbjct: 747 LISGLREEE 755
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D TYN +I H QRV + IL M KGL P A +Y+ ++ G C+ +
Sbjct: 665 QGIDSDKVTYNCLILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKILVKGHCDLKDFNG 724
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
AY + EM G + + S LI L + L EA + E+ S
Sbjct: 725 AYFWYREMFDSGFILNDCICSQLISGLREEEMLHEAEIVSSELTS 769
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 185/455 (40%), Gaps = 85/455 (18%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F +NS I D+ +Y+ +I C RV++ + + M G+ P+ SY +I GFC
Sbjct: 274 FKEMKNS-GILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFC 332
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
KA E EM GILPD ++YS LI C K + A ++EM S P
Sbjct: 333 KEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAF 392
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------GFSPAL------ 185
+ +L+ +F+ A M G+ PD + F+ AL
Sbjct: 393 NYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF 452
Query: 186 ---------FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
++YN IH +C E+AL +L M + + PD V+Y +IS F +
Sbjct: 453 QENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNS 512
Query: 237 RKAYELKVEMDRKVVWGLDEVTY---------------AY-LMQGLS------DEDTYAS 274
KA L ++M KV + TY AY L +G+ D+ Y S
Sbjct: 513 EKAVMLFIKMT-KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTS 571
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
L+ +C GE+ + L DEMS +G P+ V + IN K K+ +AH L
Sbjct: 572 LVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK--LNKNNQAHKL------ 623
Query: 335 MYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM-LEGN 387
Y M P+ I+Y LI +F G +N A D M EG
Sbjct: 624 -YEKMKERGVYPDQILYTMLI---------------AAFCNTGEMNRAEALFDEMKQEGR 667
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
P+ +Y LI + + +A +Y EM G
Sbjct: 668 CTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 702
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 176/449 (39%), Gaps = 86/449 (19%)
Query: 38 QDLATYNKIIKQHCLMQRV---------EKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
Q+L N+ + HC + ++ + + M G+ PD SY +I GFC
Sbjct: 240 QNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRK 299
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITF 145
+A E EM GILP+ ++YS LI C + R+ +A +F+EM + PD ++
Sbjct: 300 GRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSY 359
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+ L+ C +G+ A +M FSP+ F Y ++I G + AL
Sbjct: 360 SILIDGFCRKGDMDSAIKFWEEMTS--------NNFSPSAFNYCSLIKGYYKSKQFANAL 411
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
R M ++G+ PD ++ ++S +C+ + KA L + G+ Y
Sbjct: 412 KEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQEN---GVHFNPY------ 462
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK---- 321
+Y I+ C K L L M + LPD V S LI+ K+ ++
Sbjct: 463 -----SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVM 517
Query: 322 ------------DTKAHLLLI----------IADYMYTSM------PNYIIYDTLIEN-C 352
+ K + +LI +A ++ M P+ I Y +L+ C
Sbjct: 518 LFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFC 577
Query: 353 SNNEFKSVVGLVKSFSMRGLV-------------------NEAARAHDTMLEGNYKPDGA 393
+ E L S G N+A + ++ M E PD
Sbjct: 578 NTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQI 637
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+Y +LI C +++A ++ EM + G
Sbjct: 638 LYTMLIAAFCNTGEMNRAEALFDEMKQEG 666
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
++T + F + V R + D Y ++ C + + + M
Sbjct: 533 TYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 592
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ +G SP+ ++Y I + +A++ +M ++G+ PD Y+ LI A C+ +
Sbjct: 593 SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEM 652
Query: 127 SEAYHLFQEMLS----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
+ A LF EM P+ + +T L+++ + +A ++ +M KG+
Sbjct: 653 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 703
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 174/389 (44%), Gaps = 53/389 (13%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+ ++ C + + VG +R M E+ P+ + Y ++ GFC +A EM
Sbjct: 179 TFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEM 238
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
++KG+ TY+ LIQ +CS +AY L EM+ PD TFT L+ C EG
Sbjct: 239 NEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLI 298
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A + M+ GV P+ V TYN++I G C + ++EA+ + R M P
Sbjct: 299 LEAKSVISFMVQMGVEPNVV--------TYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLP 350
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
V+Y +I G+C+ +++ KA L EM ++E Y D T+ +L++
Sbjct: 351 SVVTYNSLIHGWCKVKDVDKAMCLLNEM-------VNEGLYP-------DVVTWTTLVSG 396
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH-----LLLIIAD 333
+C G+ L M G +P + +++++GL K H +LL A
Sbjct: 397 FCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGL--------IKCHFRFEAMLLFRAL 448
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ +IY+ +I+ GL K G +N+A + +L + D
Sbjct: 449 EESDLDLDIVIYNVMID-----------GLCKD----GKLNDARKVLARLLVKGLRFDSY 493
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+N++I CR+ + A ++ M+M G
Sbjct: 494 TFNIMIGGLCRKGLLDDAEDLLMKMEENG 522
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 45/340 (13%)
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAF 162
I D +T + +I LC A+ + +M P +T T+++ C+EG ++A
Sbjct: 103 INADTYTLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAV 162
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ +M + G+ P +T+ A+++GLC +G + A+G +R M E P+ V
Sbjct: 163 CLTREMEN--------AGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVV 214
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y ++ GFC+ + +A L EM+ K V G VTY L+QG+ C+
Sbjct: 215 YNAIMDGFCKGGFVSEALSLFAEMNEKGVKG-SLVTYNCLIQGV-------------CSI 260
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
GE K L +EM KG +PD ++L++G K+ + K+ + ++ PN
Sbjct: 261 GEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQ---MGVEPNV 317
Query: 343 IIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
+ Y++LI C NE ++EA + M+ P YN LI
Sbjct: 318 VTYNSLIGGYCLMNE----------------IDEAIKVFRLMVLKKCLPSVVTYNSLIHG 361
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
C+ +V KA + EMV G + + L++ + G
Sbjct: 362 WCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVG 401
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 145/330 (43%), Gaps = 46/330 (13%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A N + ++ L TYN +I+ C + +K +L M EKG+ PD ++ ++ GFC
Sbjct: 236 AEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKE 295
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+A M Q G+ P+ TY+SLI C + EA +F+ M+ P +T+
Sbjct: 296 GLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTY 355
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT-------------------------- 179
+L+H C + KA + ++M+++G+ PD VT
Sbjct: 356 NSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQ 415
Query: 180 -GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G P L T ++ GL EA+ + R + E L D V Y ++I G C++ +L
Sbjct: 416 YGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGKLND 475
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSH 297
A RKV+ L L++GL D T+ +I C +G L L +M
Sbjct: 476 A--------RKVLARL-------LVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEE 520
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
G P+ ++ + GL +K +K +L
Sbjct: 521 NGCQPNKCSYNIFVQGLLRKRDVLRSKKYL 550
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 147/371 (39%), Gaps = 45/371 (12%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
++ D + VI C+ A+ +M + G+ P T ++++ LC + ++ A
Sbjct: 103 INADTYTLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAV 162
Query: 131 HLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
L +EM + P+ TF L++ C G+ A M+ + + P +
Sbjct: 163 CLTREMENAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVER--------NYEPNVVV 214
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YNAI+ G C G V EAL + M E G+ V+Y +I G C E +KAY L EM
Sbjct: 215 YNAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMM 274
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
K V + D T+ L++ +C +G + + ++ M G P+ V
Sbjct: 275 EKGV--------------MPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTY 320
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKS 366
+ LI G + L++ + +P+ + Y++LI C + + L+
Sbjct: 321 NSLIGGYCLMNEIDEAIKVFRLMV---LKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNE 377
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
GL PD + L+ C A ++ M +YG V
Sbjct: 378 MVNEGLY----------------PDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPT 421
Query: 427 MFSVLALLTAL 437
+ + +L L
Sbjct: 422 LLTCAVVLDGL 432
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 175/413 (42%), Gaps = 59/413 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D TY +I C + + + +LR + + + D + + +I C ++ AYE
Sbjct: 159 QLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTIIDSLCKHKFVTDAYE 218
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
EM K I P+ T++SLI C +L EA+ LF +ML PD TF L+ C
Sbjct: 219 LYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLC 278
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG+ +A ++ M+ +GV PD V TYN+++ G C + V EA +L +
Sbjct: 279 KEGKIKEAKNVIAVMMKEGVEPDVV--------TYNSLMDGYCLVKEVYEAKHVLNIISR 330
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------ 267
MG +PD I C+ + + +A L EM K + D+VTY L+ GL
Sbjct: 331 MGAAPD-------IQSLCKIKMIDEALSLFNEMRSKGITP-DKVTYNSLIDGLCKARRIP 382
Query: 268 ------DED----------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
DE TY SLI+A C + K + L ++ +G D S+LI
Sbjct: 383 CAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILI 442
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+GL K+ R KD + +I+ L+ N + ++ +G
Sbjct: 443 DGLCKQGRLKDAQ------------------VIFQDLLIKGYNLNVCTYSIMINGLCSKG 484
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
L +EA M + PD Y + + KA + EM+ G +
Sbjct: 485 LFDEATTLLSKMEDNGCIPDAVTYEPINRALFKNDENDKAEQLLREMIARGLL 537
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 199/456 (43%), Gaps = 91/456 (19%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ D+ T N +I +C +Q++ I + + G DA++ ++ G C N ++
Sbjct: 88 IRPDIFTLNILINCYCHVQQMPFAFSIFAKILKMGFESDAITLTTLMKGLCLNGKVKESL 147
Query: 96 EFKLEMDQKGILPDAFTYSSLIQ-----------------------------------AL 120
F + G D TY +LI +L
Sbjct: 148 HFHDHVLALGFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTIIDSL 207
Query: 121 CSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C + +++AY L+ EM++ P+ ITF +L++ C+ G+ +AF + +QM+ K + PD
Sbjct: 208 CKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPD- 266
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
++T+N ++ LC G+++EA ++ M + G+ PD V+Y ++ G+C +E+
Sbjct: 267 -------IYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVY 319
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+A + + R M D I + C + + L+L +EM
Sbjct: 320 EAKHVLNIISR--------------MGAAPD-------IQSLCKIKMIDEALSLFNEMRS 358
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MP-NYIIYDTLIEN-CSN 354
KG PD V + LI+GL K R D M+ + +P N Y++LI+ C N
Sbjct: 359 KGITPDKVTYNSLIDGLCKARRIPCAWE-----FVDEMHANGIPANIFTYNSLIDALCKN 413
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
+ + LVK +G+ + D Y++LI C++ + A +
Sbjct: 414 HHVDKAIVLVKKIKDQGI----------------QSDMYTYSILIDGLCKQGRLKDAQVI 457
Query: 415 YMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+ +++ G+ ++ + ++ L G+++E + ++
Sbjct: 458 FQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLL 493
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 180/412 (43%), Gaps = 55/412 (13%)
Query: 50 HCLMQR-----VEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGK-AYEFKLEMD 102
HC R V+ + M +P + + ++T N+ P + KLE
Sbjct: 30 HCSHSRFVPNTVDNAISSFNHMLHMNPTPSIIQFNKILTSLVKLNQYPTVISLSKKLE-- 87
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
I PD FT + LI C +++ A+ +F ++L D IT TTLM CL G+
Sbjct: 88 ---IRPDIFTLNILINCYCHVQQMPFAFSIFAKILKMGFESDAITLTTLMKGLCLNGKVK 144
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
++ H H ++ G D VT Y +I+GLC +G + AL +LR + + D
Sbjct: 145 ESLHFHDHVLALGFQLDHVT--------YGTLINGLCKIGETKAALLMLRKIEGRLVESD 196
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAY 279
V + +I C+++ + AYEL EM K + + T+ SLI +
Sbjct: 197 VVMHNTIIDSLCKHKFVTDAYELYSEMITKRIS--------------PNIITFNSLIYGF 242
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C G+L + L +M K PD ++L++ L K+ + K+ K +IA M +
Sbjct: 243 CIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKN----VIAVMMKEGV 298
Query: 340 -PNYIIYDTLIEN-CSNNEF---KSVVGL---------VKSFSMRGLVNEAARAHDTMLE 385
P+ + Y++L++ C E K V+ + ++S +++EA + M
Sbjct: 299 EPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRS 358
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
PD YN LI C+ + A+ EM G +++F+ +L+ AL
Sbjct: 359 KGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDAL 410
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 57/306 (18%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I ++ T+N +I C++ ++++ G+ M K ++PD ++ ++ C
Sbjct: 225 TKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIK 284
Query: 93 KAYEFKLEMDQKGILPDAFTYSSL----------------------------IQALCSKR 124
+A M ++G+ PD TY+SL IQ+LC +
Sbjct: 285 EAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIK 344
Query: 125 RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
+ EA LF EM S PD +T+ +L+ C A+ +M G+
Sbjct: 345 MIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGI-------- 396
Query: 182 SPA-LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
PA +FTYN++I LC V++A+ +++ + + G+ D +Y I+I G C+ L+
Sbjct: 397 -PANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLK--- 452
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
D +V++ L++G + + TY+ +IN C++G + TL +M G
Sbjct: 453 ------DAQVIFQ------DLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNG 500
Query: 300 SLPDSV 305
+PD+V
Sbjct: 501 CIPDAV 506
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E ++ D+ TYN ++ +CL++ V + +L ++ G +PD I C
Sbjct: 291 AVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPD-------IQSLCKI 343
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM KGI PD TY+SLI LC RR+ A+ EM + P + T+
Sbjct: 344 KMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTY 403
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ A C KA + ++ +G+ D ++TY+ +I GLC GR+++A
Sbjct: 404 NSLIDALCKNHHVDKAIVLVKKIKDQGIQSD--------MYTYSILIDGLCKQGRLKDAQ 455
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
I + + G + + +Y I+I+G C +A L +M+ D VTY + +
Sbjct: 456 VIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIP-DAVTYEPINRA 514
Query: 266 L--SDE-DTYASLINAYCAQGEL 285
L +DE D L+ A+G L
Sbjct: 515 LFKNDENDKAEQLLREMIARGLL 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
F ++ I ++ TYN +I C V+K + +++ + ++G+ D +Y +I G
Sbjct: 386 EFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGL 445
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C A ++ KG + TYS +I LCSK EA L +M PD
Sbjct: 446 CKQGRLKDAQVIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDA 505
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
+T+ + A E KA + +MI +G+L
Sbjct: 506 VTYEPINRALFKNDENDKAEQLLREMIARGLL 537
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 163/387 (42%), Gaps = 53/387 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y II C + + + + M + + P+ + Y VI G C +A
Sbjct: 174 DEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLC 233
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCL 154
EM + GI D ++Y+S+I CS R A L EM+ PD TF L+ C
Sbjct: 234 TEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G S+A+++ MI +G PD V+ YNA+++G C G V EA + M E
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVS--------YNALMNGYCLSGSVGEAKQVFDKMVER 345
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------- 267
P+ +SY +I+G+C+ R + +A L EM K + D VTY L+ GLS
Sbjct: 346 TALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVP-DTVTYNCLLDGLSKSGRSLY 404
Query: 268 ---------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
D TY L++ Y + K L L + G P+ ++L++
Sbjct: 405 EWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLD 464
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
GL K R K K L+ A PN Y+ +I GL K G
Sbjct: 465 GLCKSGRLKYAKEIFQLLSAK---GCQPNIRTYNIMIH-----------GLCK----EGF 506
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLI 399
++EA M+ NY P+ ++ ++
Sbjct: 507 LDEAEALLYKMVNNNYLPNYITFDTIV 533
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 26/318 (8%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+F+ + F + + G Q D+ ++K CL RV + V +L
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEY 166
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
++G D + Y +I G C A + +M + + P+ Y+++I LC + +
Sbjct: 167 VDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLV 226
Query: 127 SEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKG-VLPDFVTGFS 182
EA L EM+ D ++ +++H C G F A + +M+ +G V PD
Sbjct: 227 DEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD------ 280
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
++T+N +I GLC LGRV EA ++ M + G PD VSY +++G+C + + +A ++
Sbjct: 281 --VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+M + L + +Y +LIN YC + + + L EM +K +P
Sbjct: 339 FDKMVERT--------------ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVP 384
Query: 303 DSVIDSLLINGLDKKART 320
D+V + L++GL K R+
Sbjct: 385 DTVTYNCLLDGLSKSGRS 402
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 142/340 (41%), Gaps = 44/340 (12%)
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACCLEGEFSKAF 162
I P T+S LI A ++ A+ L +L I TTLM CL+G +A
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+ H+ + +G D V Y II+GLC +G+ +A+ + M ++ + P+ +
Sbjct: 161 SLLHEYVDRGFRFDEVC--------YGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIM 212
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y VI G C+ + +A L EM V G++ Y+Y S+I+ +C+
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEM---VENGIELDVYSY-----------NSMIHGFCSV 258
Query: 283 GELFKVLTLDDEMSHKGSL-PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPN 341
G + L DEM +G + PD ++LI+GL K R +
Sbjct: 259 GRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEA------------------ 300
Query: 342 YIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
Y + +I+ + S L+ + + G V EA + D M+E P+ Y LI
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLING 360
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+C+ V +A + EM V + LL L G
Sbjct: 361 YCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 42/269 (15%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F A +K MV G + D+ T+N +I C + RV + ++ M
Sbjct: 261 FQAAVKLLDEMVVRG------------KVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMI 308
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
++G PD +SY ++ G+C + G+A + +M ++ LP+ +Y +LI C R +
Sbjct: 309 KRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVD 368
Query: 128 EAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT----- 179
EA L EM + PD +T+ L+ G + + M G D +T
Sbjct: 369 EAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL 428
Query: 180 ----------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
G SP + TYN ++ GLC GR++ A I + + G
Sbjct: 429 DDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQ 488
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEM 246
P+ +Y I+I G C+ L +A L +M
Sbjct: 489 PNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 129/326 (39%), Gaps = 68/326 (20%)
Query: 165 HHQMIHKGVLPDF---VTGFSPALFT--------YNAIIHGLCFLGRVEEALG---ILRG 210
HH+ +HK LP F V+ F L +N ++ L L R + IL+
Sbjct: 40 HHKKLHK--LPTFNDTVSSFHHILHHHPPPPIQHFNKLLSTLIKLKRYNAVVSLYTILQS 97
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
P + P +++ I+I+ F Q ++ A+ L + K+ + +D LM+GL
Sbjct: 98 KPT--IKPSLITFSILINAFAQLGQMGFAFSLLGNI-LKMGFQIDVRILTTLMKGL---- 150
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
C +G + + ++L E +G D V +INGL K +T+D
Sbjct: 151 ---------CLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRD-------- 193
Query: 331 IADYMYTSM------PNYIIYDTLIEN-CSNNEFKSVVGL-------------------V 364
A M+ M PN I+Y+T+I+ C GL +
Sbjct: 194 -AIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 365 KSFSMRGLVNEAARAHDTML-EGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
F G A + D M+ G PD +N+LI C+ V +AYN+ M++ G+
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312
Query: 424 VSHMFSVLALLTALRDHGMYNERSWV 449
+ S AL+ G E V
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQV 338
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
DL TYN ++ + ++ +K + + + + E G+SP+ +Y ++ G C + A E
Sbjct: 420 DLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIF 479
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+ KG P+ TY+ +I LC + L EA L +M++ P+ ITF T++ A
Sbjct: 480 QLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I D T + ++ C RV+ V +++ ++ K SPD SY +++ C +R
Sbjct: 156 SDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLS 215
Query: 93 KAYEFKLEMDQK-GILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDDITFTTL 148
Y F EM K + P+ TY+ LI +C+ + L EA L +E PD + T+
Sbjct: 216 LVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTI 275
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
M C+ S+A ++++M KGV PD L TYN +I GL GRV EA +L
Sbjct: 276 MKGYCMLSRGSEAIEVYNRMKEKGVEPD--------LITYNTLIFGLSKSGRVSEAKKLL 327
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS- 267
R M E G PD V+Y +++G C+ E A L EM+ K + TY L+ GL
Sbjct: 328 RVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGC-SPNTCTYNTLLHGLCK 386
Query: 268 ---------------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
D +YA+ + A C+ G + + D SL D
Sbjct: 387 SRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAA 446
Query: 307 DSLLINGLD--KKARTKDTK 324
S L + L KKA+ + K
Sbjct: 447 YSTLESTLKWFKKAKEEGLK 466
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 33/292 (11%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGI------LRGMAEKGLSPDALSYRYVITGFCNN 88
S D +TY+ I+ HC K + L M G+SPD + + C
Sbjct: 118 SFSPDKSTYH-ILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTA 176
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDIT 144
A E E+ K PD ++Y+ L++ LC R LS Y EM + P+ +T
Sbjct: 177 DRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVT 236
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+T L+ C +A + + + GF P F YN I+ G C L R EA
Sbjct: 237 YTILIDNVCNTKNLREATRLVDILEEE--------GFKPDCFLYNTIMKGYCMLSRGSEA 288
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+ + M E G+ PD ++Y +I G ++ + +A +L M K
Sbjct: 289 IEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEK--------------G 334
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
DE TY SL+N C +GE L L +EM KG P++ + L++GL K
Sbjct: 335 HFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCK 386
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 25/248 (10%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
R ++ +L TY +I C + + + ++ + E+G PD Y ++ G+C
Sbjct: 225 RTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSR 284
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTT 147
+A E M +KG+ PD TY++LI L R+SEA L + M PD++T+T+
Sbjct: 285 GSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTS 344
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
LM+ C +GE A + +M KG SP TYN ++HGLC ++A+ +
Sbjct: 345 LMNGMCRKGETLAALALLEEMEMKGC--------SPNTCTYNTLLHGLCKSRMFDKAMEL 396
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS 267
M GL D SY + C + AYE+ YA + LS
Sbjct: 397 YGAMKSDGLKLDMASYATFVRALCSVGRVADAYEV--------------FDYAVESKSLS 442
Query: 268 DEDTYASL 275
D Y++L
Sbjct: 443 DVAAYSTL 450
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 154/388 (39%), Gaps = 50/388 (12%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLS-----PPDDITFTTLMHACCLEGEFSKAFH 163
D+ ++SL+Q+ S ++++ + M PD T+ L+ CC + + + +
Sbjct: 85 DSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCC---KSTDSKY 141
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+IH+ + G SP T + + LC RV++A+ +++ + SPD SY
Sbjct: 142 STLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSY 201
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT------------ 271
++ C++R L Y EM K + VTY L+ + +
Sbjct: 202 NFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILE 261
Query: 272 ----------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
Y +++ YC + + + + M KG PD + + LI GL K R
Sbjct: 262 EEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVS 321
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
+ K LL ++A+ + P+ + Y +L+ C E + + L++ M+G
Sbjct: 322 EAK-KLLRVMAEKGH--FPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGC-------- 370
Query: 381 DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDH 440
P+ YN L+ C+ KA +Y M G M S + AL
Sbjct: 371 --------SPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSV 422
Query: 441 GMYNERSWVIQNTLRSCNLNDSELHKVL 468
G + V + S +L+D + L
Sbjct: 423 GRVADAYEVFDYAVESKSLSDVAAYSTL 450
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 207/512 (40%), Gaps = 78/512 (15%)
Query: 8 FTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGV 60
F TL+T+ ++ + VV + N + ++ +N II V+K
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330
Query: 61 GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQAL 120
++R M E G PD +Y +I C+ +A EF ++ +LP+ F+Y+ L+ A
Sbjct: 331 EMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390
Query: 121 CSKRRLSEAYHLF---QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C + A + E PD +++ +H GE A + +M+ KGV PD
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
YN ++ GLC GR A +L M ++ L PDA Y ++ GF +N EL
Sbjct: 451 QI--------YNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELD 502
Query: 238 KAYEL-KVEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYAS 274
KA EL +V M + + G+ V Y +++GL DE T+++
Sbjct: 503 KATELFEVVMSKGIDPGV--VGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
+I+ Y Q +L L + +M + P+ V + LING K A D + A
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIA---DMSRAEKVFRAMQ 617
Query: 335 MYTSMPNYIIYDTLI---------------------ENCSNNE--FKSVVGLVKSFSMRG 371
+ PN + Y LI NC N+ F ++ + + +
Sbjct: 618 SFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTT 677
Query: 372 LVNEAARAHD---------TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ E +D TM+ + A YN +I C+ V A + +M+R G
Sbjct: 678 LLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKG 737
Query: 423 FVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
F+ ALL L G E +I L
Sbjct: 738 FLMDSVCFSALLHGLCQTGKSKEWRNIISGDL 769
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 50/416 (12%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
++K C + +VE+G ++ G P+ + Y +I G+C +A E+ KG
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACCLEGEFSKAF 162
LP TY +LI C + L EM ++ F +++ A G KA
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
M M G PD TYN +I+ C GR++EA L E L P+ S
Sbjct: 331 EMMRMMTEMGCEPDIT--------TYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFS 382
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y ++ +C+ + Y + +M K+ D+ D +Y + I+ A
Sbjct: 383 YTPLMHAYCKQGD----YVMASDMLFKIAETGDK----------PDLVSYGAFIHGSVAG 428
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PN 341
GE+ L + ++M KG PD+ I ++L++GL KK R K L++++ + ++ P+
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAK----LLLSEMLDLNLQPD 484
Query: 342 YIIYDTLIEN-CSNNEF----------------KSVVG---LVKSFSMRGLVNEAARAHD 381
+Y TL++ NNE VVG ++K G + +A +
Sbjct: 485 AYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVN 544
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
M N+ PD ++ +I + ++ ++ A M+ +M++ + ++ + +L+
Sbjct: 545 KMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGF 600
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 180/434 (41%), Gaps = 81/434 (18%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D T +IK CL +V + + + +G + +SY +I G C A +
Sbjct: 117 DTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVL 176
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
++D K + + YS++I +LC ++ ++EAY L+ +M+ PD +TF+ L++ C+
Sbjct: 177 RKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMV 236
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT------------------------------------ 179
G+F +AF + H+M+ + PD T
Sbjct: 237 GQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKH 296
Query: 180 --------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
+P + +Y II LC + V+EAL + M G++PD V+Y +I G C
Sbjct: 297 VFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLC 356
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
++ + A+EL +M + +D TY S ++A C ++ K + L
Sbjct: 357 KSERISHAWELLDQMHAR--------------GQPADVITYTSFLHALCKNHQVDKAVAL 402
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL-LIIADYMYTSMPNYIIYDTLIE 350
++ +G P+ ++LI+GL K+ R ++ + L+I Y T I
Sbjct: 403 VKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI------- 455
Query: 351 NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK 410
++ + GL +EA + M + PD Y +I + HK
Sbjct: 456 ------------MINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHK 503
Query: 411 AYNMYMEMVRYGFV 424
A + EM+ G +
Sbjct: 504 AEKLLREMIARGLL 517
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 189/420 (45%), Gaps = 38/420 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I + T+N +I +C + ++ +L + + G PD ++ +I G C N +A
Sbjct: 78 AITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEA 137
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHA 151
F + +G + +Y LI LC A + +++ L + + ++T++ +
Sbjct: 138 LHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDS 197
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C E ++A+ ++ QMI K V PD V T++A+I+G C +G+ +EA G+ M
Sbjct: 198 LCKEKLVTEAYELYSQMIVKKVSPDVV--------TFSALIYGFCMVGQFKEAFGLFHEM 249
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG----LS 267
++PD ++ I++ C+ ++ + M K V +++ + + + G
Sbjct: 250 VLTNINPDVCTFNILVDALCKEGSTKETKNVLAVM-MKEVNQVNKAKHVFNIIGKRRVTP 308
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
D +Y +I C + + L+L +EM KG PD V S LI+GL K R +H
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERI----SHA 364
Query: 328 LLIIADYMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE 385
++ P + I Y + + C N++ V LVK +G+
Sbjct: 365 WELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGI------------- 411
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+P+ YN+LI C+ A ++ +++ G+ +++ ++ L G+++E
Sbjct: 412 ---QPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDE 468
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 11/214 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D+ +Y IIK+ C ++ V++ + + M KG++PD ++Y +I G C + A+
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAW 365
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
E +M +G D TY+S + ALC ++ +A L +++ P+ T+ L+
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C EG F A Q+I + +L + G+ ++TYN +I+GLC G +EA+ +L M
Sbjct: 426 CKEGRFENA-----QVIFQDLL---IKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKME 477
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
+ G +PD V+Y +I +N E KA +L EM
Sbjct: 478 DNGCTPDVVTYETIIRALFKNDENHKAEKLLREM 511
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 143/330 (43%), Gaps = 32/330 (9%)
Query: 130 YHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
YH Q P +TF T+++ C GE AF + +++ G PD +T
Sbjct: 71 YHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTIT--------LT 122
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I GLC G+V EAL + G + VSY I+I+G C+ E R A ++ ++D K
Sbjct: 123 TLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGK 182
Query: 250 VVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYCAQGELFK 287
+V + V Y+ ++ L E T+++LI +C G+ +
Sbjct: 183 LV-NTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKE 241
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
L EM PD ++L++ L K+ TK+TK L +++ + + + +++
Sbjct: 242 AFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKH-VFNI 300
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
+ + + S ++K +V+EA + M PD Y+ LI C+
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360
Query: 408 VHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+ A+ + +M G + + + + L AL
Sbjct: 361 ISHAWELLDQMHARGQPADVITYTSFLHAL 390
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I D TY+ +I C +R+ +L M +G D ++Y + C N K
Sbjct: 339 KGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDK 398
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMH 150
A ++ +GI P+ TY+ LI LC + R A +FQ++L +T T +++
Sbjct: 399 AVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMIN 458
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
CLEG F +A + +M G PD V TY II L +A +LR
Sbjct: 459 GLCLEGLFDEAMTLLEKMEDNGCTPDVV--------TYETIIRALFKNDENHKAEKLLRE 510
Query: 211 MPEMGLSPDAV 221
M GL + V
Sbjct: 511 MIARGLLEEKV 521
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 108/301 (35%), Gaps = 68/301 (22%)
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ +P++ T+N +I+ C LG ++ A +L + +MG PD +
Sbjct: 76 LNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTI---------------- 119
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
T +LI C G++ + L D +
Sbjct: 120 ---------------------------------TLTTLIKGLCLNGKVHEALHFHDHVIA 146
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
+G + V +LINGL K T+ L I + T N ++Y T+I+
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT---NVVMYSTIID------- 196
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
S LV EA + M+ PD ++ LI+ C +A+ ++ E
Sbjct: 197 --------SLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHE 248
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFP 477
MV + + L+ AL G E V+ ++ N + H V N I R+
Sbjct: 249 MVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKH-VFNIIGKRRVT 307
Query: 478 P 478
P
Sbjct: 308 P 308
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 177/411 (43%), Gaps = 55/411 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K ++ + + Y +I C + +AYE
Sbjct: 116 DQVSYGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELY 175
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+M K I P+ T SSLI C +L EA+ LF EML P+ TFT L+ A C E
Sbjct: 176 SQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKE 235
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G+ +A ++ M+ +GV P + TYN ++ G C V +A + + +
Sbjct: 236 GKIKEAKNVIAVMMKEGV--------EPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRR 287
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----- 270
++P+ SY I+I+G C+ + + +A EM + + VTY+ L+ L
Sbjct: 288 MTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCEP----NTVTYSSLIDALCKSGRISHA 343
Query: 271 -----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY SL++A C ++ K + L ++ +G P+ ++LI+G
Sbjct: 344 WELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDG 403
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L K+ R ++ + +I+ L+ + + ++ + GL
Sbjct: 404 LCKEGRLENAQ------------------VIFQDLLIKGYKVKVWTYNTMINGLCLEGLF 445
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+EA + M + PD Y +I+ + KA + EM+ G +
Sbjct: 446 DEAMTLLEKMEDNGCTPDVVTYETIIYALFKNDENDKAEKLLREMITRGLL 496
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 149/301 (49%), Gaps = 34/301 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I ++ T+ +I C ++++ ++ M ++G+ P ++Y ++ G+C + K
Sbjct: 216 KNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVNK 275
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACC 153
A + ++ + P+ +Y+ +I LC + + EA + F+EM P+ +T+++L+ A C
Sbjct: 276 AKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCEPNTVTYSSLIDALC 335
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA-LFTYNAIIHGLCFLGRVEEALGILRGMP 212
G S A+ + QM +G PA + TYN+++H LC +V++A+ +++ +
Sbjct: 336 KSGRISHAWELLDQMHDRG---------QPANIITYNSLLHALCKNHQVDKAIALVKKIK 386
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKA----YELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ G+ P+ +Y I+I G C+ L A +L ++ + VW
Sbjct: 387 DQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVW---------------- 430
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
TY ++IN C +G + +TL ++M G PD V +I L K ++ KA L
Sbjct: 431 --TYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFK--NDENDKAEKL 486
Query: 329 L 329
L
Sbjct: 487 L 487
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 33/248 (13%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E ++ + TYN ++ +CL V K + + ++ ++P+ SY +I G C
Sbjct: 246 AVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKI 305
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+ +A F EM + P+ TYSSLI ALC R+S A+ L +M P + IT+
Sbjct: 306 KMVDEALNFFKEMHCE---PNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITY 362
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPD---------------------------FV 178
+L+HA C + KA + ++ +G+ P+ +
Sbjct: 363 NSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLI 422
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
G+ ++TYN +I+GLC G +EA+ +L M + G +PD V+Y +I +N E K
Sbjct: 423 KGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFKNDENDK 482
Query: 239 AYELKVEM 246
A +L EM
Sbjct: 483 AEKLLREM 490
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 189/450 (42%), Gaps = 85/450 (18%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I + T N +I + + + I + + G P +++ +I G C +A
Sbjct: 43 ITPTIVTLNILINCYGHLGEITFAFSIFAKILKLGYHPTTITFSTLINGMCLKGKLKEAL 102
Query: 96 EFKLEMDQKGILPDAFTYSSLIQ-----------------------------------AL 120
F ++ G D +Y +LI +L
Sbjct: 103 HFHDDVIGLGFHLDQVSYGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSL 162
Query: 121 CSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C ++ ++EAY L+ +M+ P+ +T ++L++ C+ G+ +AF + H+M+ K +
Sbjct: 163 CKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNI---- 218
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+P ++T+ +I LC G+++EA ++ M + G+ P V+Y ++ G+C + E+
Sbjct: 219 ----NPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVN 274
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
KA + + ++ + + +Y +IN C + + L EM
Sbjct: 275 KAKNVFNVIGKR--------------RMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHC 320
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-CSNN 355
+ P++V S LI+ L K R +H ++ P N I Y++L+ C N+
Sbjct: 321 E---PNTVTYSSLIDALCKSGRI----SHAWELLDQMHDRGQPANIITYNSLLHALCKNH 373
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
+ + LVK +G+ +P+ YN+LI C+ + A ++
Sbjct: 374 QVDKAIALVKKIKDQGI----------------QPNINTYNILIDGLCKEGRLENAQVIF 417
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+++ G+ +++ ++ L G+++E
Sbjct: 418 QDLLIKGYKVKVWTYNTMINGLCLEGLFDE 447
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 130 YHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
+H + P +T L++ GE + AF + +++ G+ P T++
Sbjct: 35 FHQLELNRITPTIVTLNILINCYGHLGEITFAFSIFAKILK--------LGYHPTTITFS 86
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I+G+C G+++EAL + +G D VSY +ISG C+ E R A ++ +++ K
Sbjct: 87 TLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLCKIGETRAALKMLRQIEGK 146
Query: 250 VVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYCAQGELFK 287
+V + V Y ++ L E T +SLI +C G+L +
Sbjct: 147 LV-NTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKE 205
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYD 346
L EM K P+ ++LI+ L K+ + K+ K +IA M + P + Y+
Sbjct: 206 AFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKN----VIAVMMKEGVEPTVVTYN 261
Query: 347 TLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
TL++ C +NE VN+A + + + P+ Y ++I C+
Sbjct: 262 TLMDGYCLDNE----------------VNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKI 305
Query: 406 LNVHKAYNMYMEM 418
V +A N + EM
Sbjct: 306 KMVDEALNFFKEM 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ ++ TYN +I C R+E I + + KG +Y +I G C +
Sbjct: 388 QGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDE 447
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G PD TY ++I AL +A L +EM++
Sbjct: 448 AMTLLEKMEDNGCTPDVVTYETIIYALFKNDENDKAEKLLREMIT 492
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 35/225 (15%)
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
T+++LIN C +G+L + L D++ G D V LI+GL K T+ L I
Sbjct: 84 TFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLCKIGETRAALKMLRQI 143
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+ T N ++Y+ +I+ S LV EA + M+ P
Sbjct: 144 EGKLVNT---NVVMYNIIID---------------SLCKEKLVTEAYELYSQMILKKISP 185
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+ + LI+ C + +A+ ++ EM+ ++++ L+ AL G E VI
Sbjct: 186 NVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVI 245
Query: 451 Q--------------NTLRSCNLNDSELHK---VLNEIDTRKFPP 478
NTL D+E++K V N I R+ P
Sbjct: 246 AVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTP 290
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 211/511 (41%), Gaps = 74/511 (14%)
Query: 29 AARNSESIQQD----LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG 84
A R + ++QD L TYN +I C +E + + M E GL P+ ++ +I
Sbjct: 397 ALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDR 456
Query: 85 FCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PD 141
C + +A L +D K PD+ T+ SLI L + R+ +AY L+++ML P+
Sbjct: 457 LCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPN 516
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV----------------------- 178
+ +T+L+ G ++ +M+H+G PD +
Sbjct: 517 VVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576
Query: 179 ----TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
G P + +Y+ +IHGL G E + M E GL D ++Y VI GFC++
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636
Query: 235 ELRKAYELKVEMDRKVVWGLDE--VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
++ KAY+L EM K GL VTY ++ GL+ D L AY L
Sbjct: 637 KVDKAYQLLEEMKTK---GLQPTVVTYGSVVDGLAKID---RLDEAY----------MLF 680
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIEN 351
+E G + VI S LI+G K R + LI+ + M + PN ++ L++
Sbjct: 681 EEAKSIGVDLNVVIYSSLIDGFGKVGRIDEA----YLILEELMQKGLTPNSYTWNCLLD- 735
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
LVK+ ++EA M P+ Y+++I C +KA
Sbjct: 736 ----------ALVKAEE----IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKA 781
Query: 412 YNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEI 471
+ + EM + G + + ++ L G E + S + DS + + E
Sbjct: 782 FVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEG 841
Query: 472 DTRKFPPIGATLLDVLAEIAMDGLLLDGRKC 502
+ + A + V E + G ++ + C
Sbjct: 842 LSSANKAMDAYI--VFEETRLKGCRVNSKTC 870
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 172/441 (39%), Gaps = 53/441 (12%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
FT ++ F R S S DL YN I + +V+ M
Sbjct: 241 FTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMK 300
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+GL PD ++Y +I C R +A E E+D +P + Y+++I S +
Sbjct: 301 AQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFD 360
Query: 128 EAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
EAY L + P I + ++ +G+ +A +H +M +P
Sbjct: 361 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA---------APN 411
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
L TYN +I LC G +E AL + M E GL P+ ++ I+I C+ ++L +A + +
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 245 EMDRKVVWGLDEVTYAYLMQGLS----------------DED------TYASLINAYCAQ 282
+D KV D T+ L+ GL D D Y SLI +
Sbjct: 472 GLDHKVC-SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
G + EM H+G PD ++ + ++ + K + +A I A + +P+
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL---VPDV 587
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
Y LI GLVK+ G E + M E D YN +I
Sbjct: 588 RSYSILIH-----------GLVKA----GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632
Query: 403 CRRLNVHKAYNMYMEMVRYGF 423
C+ V KAY + EM G
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGL 653
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 135/326 (41%), Gaps = 53/326 (16%)
Query: 99 LEMDQKGILPDAFT-YSSLIQALCSKRR---LSEAYHLFQEMLSPPDDITFTTLMHACCL 154
+EM +K AF+ Y++LI AL + R + +H QE+ + FTTL+
Sbjct: 191 IEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAR 250
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
EG A + +M F+ L YN I +G+V+ A M
Sbjct: 251 EGRIDAALSLLDEMKS--------NSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ 302
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMD--RKVVWGLDEVTYAYLMQGLSDEDTY 272
GL PD V+Y +I C+ R L +A EL E+D R V YA Y
Sbjct: 303 GLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSV-----PCVYA-----------Y 346
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
++I Y + G+ + +L + KG +P + + ++ L +K + ++ L I
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA-----LRIH 401
Query: 333 DYMYT-SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
D M + PN Y+ LI+ C E ++ A + DTM E P
Sbjct: 402 DEMRQDAAPNLTTYNILIDMLCKAGELEA----------------ALKVQDTMKEAGLFP 445
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYM 416
+ N++I C+ + +A ++++
Sbjct: 446 NIMTVNIMIDRLCKAQKLDEACSIFL 471
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
AA + + ++ TY+ ++ +CL++ V K I MA+ G++PD SY +I GFC
Sbjct: 150 AAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKI 209
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+ A EM + I+P+ TY+SLI LC ++S A L EM PPD IT+
Sbjct: 210 KMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITY 269
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
++L+ A C KA + ++ +G+ P+ ++TY +I+GLC GR E+A
Sbjct: 270 SSLLDALCKNHHVDKAIALLTKLKDQGLQPN--------MYTYTILINGLCKGGRPEDAQ 321
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
I + G + + +Y ++I FC N +A + +M+ + VTY +++
Sbjct: 322 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIP-NAVTYEIIIRS 380
Query: 266 LSDED 270
L D+D
Sbjct: 381 LFDKD 385
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 65/423 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L T + +I + + +L + +KG PDA++ +I G C +A F
Sbjct: 9 NLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQIHQALHFH 68
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ----EMLSP-----PDDITFTTLM 149
++ G + +Y +LI LC + A L + +++ P P+ +T++ L+
Sbjct: 69 DKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALI 128
Query: 150 HACCL-----EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
C+ EG+ +A ++ M+ K GF P + TY++++ G C + V +A
Sbjct: 129 SGFCILAFCKEGKVKEAKNVFAAMMKK--------GFKPNVVTYSSLMDGYCLVKEVNKA 180
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLM 263
I M + G++PD SY I+I+GFC+ + A L EM RK++ + VTY L+
Sbjct: 181 KSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNV--VTYNSLI 238
Query: 264 QGL----------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
GL D TY+SL++A C + K + L ++ +G
Sbjct: 239 DGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQ 298
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV 361
P+ ++LINGL K R +D + I++ L+ N +
Sbjct: 299 PNMYTYTILINGLCKGGRPEDAQN------------------IFEDLLVKGYNINVNTYT 340
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
++ F G+ EA M E P+ Y ++I + KA + +EM+
Sbjct: 341 VMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITR 400
Query: 422 GFV 424
G +
Sbjct: 401 GLL 403
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 33/306 (10%)
Query: 35 SIQQDLATYNKIIKQHCLMQ-----RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
I ++ TY+ +I C++ +V++ + M +KG P+ ++Y ++ G+C +
Sbjct: 116 GISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVK 175
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFT 146
KA M Q G+ PD +Y+ LI C + A +LF+EM P+ +T+
Sbjct: 176 EVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYN 235
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
+L+ C G+ S A + +M +G PD + TY++++ LC V++A+
Sbjct: 236 SLIDGLCKSGKISYALKLVDEMHDRGQPPDII--------TYSSLLDALCKNHHVDKAIA 287
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+L + + GL P+ +Y I+I+G C+ A + ++ L++G
Sbjct: 288 LLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDL---------------LVKGY 332
Query: 267 S-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL-DKKARTKDTK 324
+ + +TY +I+ +C G + L + +M G +P++V ++I L DK K K
Sbjct: 333 NINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEK 392
Query: 325 AHLLLI 330
L +I
Sbjct: 393 LLLEMI 398
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 47/371 (12%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M+ G + + T S LI + + ++ + ++ PD IT T+L+ CL+G+
Sbjct: 1 MELNGFVSNLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQ 60
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM------ 211
+A H H ++ GF +Y +I+GLC +G+ AL +LR +
Sbjct: 61 IHQALHFHDKLA--------ALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQ 112
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DED 270
P++G+SP+ V+Y +ISGFC L E KV+ + V A + +G +
Sbjct: 113 PDVGISPEVVTYSALISGFCI---LAFCKEGKVKEAKNVFA-------AMMKKGFKPNVV 162
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY+SL++ YC E+ K ++ + M+ G PD ++LING + K T A + L
Sbjct: 163 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGF---CKIKMTDAAMNLF 219
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+ +PN + Y++LI+ GL KS G ++ A + D M + P
Sbjct: 220 EEMHCRKIIPNVVTYNSLID-----------GLCKS----GKISYALKLVDEMHDRGQPP 264
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
D Y+ L+ C+ +V KA + ++ G +M++ L+ L G + +
Sbjct: 265 DIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIF 324
Query: 451 QNTL-RSCNLN 460
++ L + N+N
Sbjct: 325 EDLLVKGYNIN 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ +Q ++ TY +I C R E I + KG + + +Y +I FCNN G+
Sbjct: 295 QGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGE 354
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M++ G +P+A TY +I++L K +A L EM++
Sbjct: 355 ALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMIT 399
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 185/428 (43%), Gaps = 86/428 (20%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I CL + ++ + M + ++Y +I G C +A +F ++
Sbjct: 57 TFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGLCKMGKTTEALQFLRKI 116
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
D K + + ++++I +LC ++ ++EAY L+ +M+ PD +TF +L++ C G+
Sbjct: 117 DGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCFVGQL 176
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE---------------- 202
+AF + H+M+ K + +P ++T+N ++ LC G V+
Sbjct: 177 IEAFGLFHEMVLKNI--------NPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEV 228
Query: 203 -EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
+A +L + +MG+ PDA SY I+I+GFC+ + + +A+ L EM
Sbjct: 229 NKAKHVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMR-------------- 274
Query: 262 LMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD-----SVIDSL------ 309
+G+S + TY+SLI+ C G + L DEM G PD S+ID+L
Sbjct: 275 -CRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHV 333
Query: 310 -------------LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE 356
LI+GL K+ R KD + +I+ L+ N
Sbjct: 334 DQGIQLDMYTYNILIDGLCKQGRLKDAQ------------------VIFQDLLIKGYNLT 375
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
+ ++ + GL++EA M + PD +I +A +
Sbjct: 376 VWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLR 435
Query: 417 EMVRYGFV 424
EM+ G +
Sbjct: 436 EMIVRGLL 443
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 143/341 (41%), Gaps = 65/341 (19%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
+F + + + ++ +N II C + V + + M K +SPD +++ +I GF
Sbjct: 111 QFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGF 170
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS------- 138
C +A+ EM K I P+ +T++ L+ ALC + + A +L M+
Sbjct: 171 CFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNK 230
Query: 139 -------------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
PPD ++ +++ C ++AF + ++M +G+ SP
Sbjct: 231 AKHVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGI--------SPNT 282
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TY+++I GLC LGR+ A ++ M + G PD +Y +I C+N + + +
Sbjct: 283 VTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQ---- 338
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAYCAQG 283
LD TY L+ GL + TY +IN C +G
Sbjct: 339 --------LDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEG 390
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGL---DKKARTK 321
L + L +M G +PD+V +I L DK R +
Sbjct: 391 LLDEAEALLSKMEDNGCVPDAVTCETIIRALFENDKNERAE 431
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 26/316 (8%)
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
++ A+ +F ++L P ITF TL++ CL G+F +A H H M+ F
Sbjct: 35 EMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHML--------AHVF 86
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
TY +I+GLC +G+ EAL LR + ++ + + + +I C+ + + +AYE
Sbjct: 87 HLNQVTYAILINGLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYE 146
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
L +M K + D T+ SLI +C G+L + L EM K
Sbjct: 147 LYSQMIVKKIS--------------PDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNIN 192
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV 361
P+ ++L++ L K+ K K L +++ + +++ T+ + + +S
Sbjct: 193 PNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVL-STITQMGVPPDAQSYN 251
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
++ F +VNEA + M P+ Y+ LI C+ + A+ + EM
Sbjct: 252 IMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDN 311
Query: 422 GFVSHMFSVLALLTAL 437
G + + +L+ AL
Sbjct: 312 GQQPDICTYNSLIDAL 327
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 160/384 (41%), Gaps = 50/384 (13%)
Query: 108 PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFH- 163
P T+++LI +C + EA H ML+ + +T+ L++ C G+ ++A
Sbjct: 53 PTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGLCKMGKTTEALQF 112
Query: 164 --------------MHHQMIHKGVLPDFVT------------GFSPALFTYNAIIHGLCF 197
MH+ +I VT SP + T+N++I+G CF
Sbjct: 113 LRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCF 172
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV--VWGLD 255
+G++ EA G+ M ++P+ ++ I++ C+ ++ A L M ++V V
Sbjct: 173 VGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAK 232
Query: 256 EVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
V G+ D +Y +IN +C + + +L +EM +G P++V S LI+GL
Sbjct: 233 HVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGL 292
Query: 315 DKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIEN-CSNNEFKSVVG--------L 363
K R + D M + P+ Y++LI+ C N+ + L
Sbjct: 293 CKLGRISYAWE-----LVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQLDMYTYNIL 347
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+ +G + +A +L Y Y ++I C + +A + +M G
Sbjct: 348 IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGC 407
Query: 424 VSHMFSVLALLTALRDHGMYNERS 447
V + ++ AL ++ NER+
Sbjct: 408 VPDAVTCETIIRALFEND-KNERA 430
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 22/185 (11%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
I + TY+ +I C + R+ ++ M + G PD +Y +I C N
Sbjct: 277 GISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNH----- 331
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHA 151
+DQ GI D +TY+ LI LC + RL +A +FQ++L ++ T+T +++
Sbjct: 332 -----HVDQ-GIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMING 385
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
CLEG +A + +M G +PD VT II L + E A +LR M
Sbjct: 386 LCLEGLLDEAEALLSKMEDNGCVPDAVTC--------ETIIRALFENDKNERAEKLLREM 437
Query: 212 PEMGL 216
GL
Sbjct: 438 IVRGL 442
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ D+ TYN +I C R++ I + + KG + +Y +I G C +
Sbjct: 335 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDE 394
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M+ G +PDA T ++I+AL + A L +EM+
Sbjct: 395 AEALLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMI 438
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
T+ +LIN C G+ + L D M + V ++LINGL K +T T+A L
Sbjct: 57 TFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGLCKMGKT--TEALQFLR 114
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
D ++ N ++++T+I+ S LV EA + M+ P
Sbjct: 115 KIDGKLVNI-NVLMHNTIID---------------SLCKEKLVTEAYELYSQMIVKKISP 158
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
D +N LI+ C + +A+ ++ EMV ++++ L+ AL G ++
Sbjct: 159 DVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLL 218
Query: 451 QNTLRSCNLNDSELHKVLNEIDTRKFPP 478
++ N + H VL+ I PP
Sbjct: 219 AMMMKQVNEVNKAKH-VLSTITQMGVPP 245
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 184/423 (43%), Gaps = 61/423 (14%)
Query: 3 LLRDSFTATL-KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVG 61
LL+D T+ + K ++ MV++GVV ++ YN +I + VE+
Sbjct: 175 LLKDGITSMVWKVYKRMVQDGVV-------------PNIYVYNCLIHACSKSRDVERAEF 221
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
IL M KG+ PD +Y +I +C +A + +M+++GI D +Y+SLI C
Sbjct: 222 ILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFC 281
Query: 122 SKRRLSEAYHLFQEMLSP-PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+ ++ EA +F E+ P+ +T+TTL+ C EF +A + M+ KG+ P V
Sbjct: 282 KEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVV-- 339
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
TYN+I+ LC GR+ +A +L M E + D+V+ +I+ +C+ +L A
Sbjct: 340 ------TYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSAL 393
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDED-TYASLINAYCAQGELFKVLTLDDEMSHKG 299
+ K +M L GL+ TY +LI+ +C EL L M G
Sbjct: 394 KFKTKM---------------LEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAG 438
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-CSNNEF 357
P+ S +++ K KD +L + +++ N +Y LI C
Sbjct: 439 FSPNYRTYSWIVDSYCK----KDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERI 494
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
+ L+ +G+ D +Y L F + + N + A +M E
Sbjct: 495 ECAEKLLYHMEGKGI----------------SGDSVIYTSLAFSYWKSGNTNAASDMLEE 538
Query: 418 MVR 420
M R
Sbjct: 539 MAR 541
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 145/366 (39%), Gaps = 82/366 (22%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL-EMDQKGILPDAFTYSSLIQAL 120
+ + M + G+ P+ Y +I +R +A EF L EM+ KG++PD FTY++LI
Sbjct: 187 VYKRMVQDGVVPNIYVYNCLIHACSKSRDVERA-EFILNEMEVKGVVPDIFTYNTLIALY 245
Query: 121 CSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
C K EA + +M D +++ +L++ C EG+ +A M ++ K +P+
Sbjct: 246 CKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNH 303
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
VT Y +I G C EEAL + M GL P V+Y ++ C + +R
Sbjct: 304 VT--------YTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIR 355
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
A +L EM + V +D T +LINAYC G+L L +M
Sbjct: 356 DANKLLHEMSERKV--------------QADSVTCNTLINAYCKIGDLNSALKFKTKMLE 401
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
G P+S LI+G C +E
Sbjct: 402 AGLTPNSFTYKALIHGF-------------------------------------CKTSEL 424
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
+S L+ ML+ + P+ Y+ ++ +C++ N + E
Sbjct: 425 ESAKELLFG----------------MLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDE 468
Query: 418 MVRYGF 423
+ GF
Sbjct: 469 FLSKGF 474
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TYN I+++ C R+ +L M+E+ + D+++ +I +C A +FK
Sbjct: 338 VVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKT 397
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
+M + G+ P++FTY +LI C L A L ML P+ T++ ++ + C +
Sbjct: 398 KMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKD 457
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ + + K GF + Y A+I LC + R+E A +L M G+
Sbjct: 458 NTDAVLALPDEFLSK--------GFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGI 509
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
S D+V Y + + ++ A ++ EM R+
Sbjct: 510 SGDSVIYTSLAFSYWKSGNTNAASDMLEEMARR 542
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 192/459 (41%), Gaps = 83/459 (18%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALS--------------YRYVITGFCNN 88
++K+ ++ C + G+ ++RG G + AL Y +++ FC
Sbjct: 174 FDKMSEKGCQPNKFTVGI-LVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQ 232
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM-------LSPPD 141
+A + M +KG+LPD T++S I ALC ++ EA +F++M L P+
Sbjct: 233 DMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPN 292
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV 201
+TF ++ C EG +A + M G +FV +L +YN + GL G++
Sbjct: 293 VVTFNLMLKGFCQEGMMEEARSLVETMKKGG---NFV-----SLESYNTWLLGLLRNGKL 344
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
E +L M E G+ P+ SY IV+ G C+N + A L MD V G+
Sbjct: 345 LEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRL---MDLMVSNGV------- 394
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
D TY +L++ YC++G++F+ + +EM KG P++ + L+N L K+ R
Sbjct: 395 ----YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKS 450
Query: 322 DTKAHLL-LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV---------GLVKSFSMRG 371
+ + L + Y ++ I+ + L N + VV L K + G
Sbjct: 451 EAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAG 510
Query: 372 LVN-----------------------------EAARAHDTMLEGNYKPDGAVYNLLIFDH 402
LVN EA + M+ N PD Y+ + +
Sbjct: 511 LVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNF 570
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
C++ + A + +M R G + + +L+ L G
Sbjct: 571 CKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKG 609
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 198/468 (42%), Gaps = 77/468 (16%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
L +YN + ++ +G +L M E G+ P+ SY V+ G C N A
Sbjct: 328 LESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMD 387
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
M G+ PD TY++L+ CSK ++ EA + EM+ P+ T TL+++ EG
Sbjct: 388 LMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEG 447
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM----- 211
S+A M +M K D V T N +++GLC G +E+A ++ M
Sbjct: 448 RKSEAEEMLQKMNEKSYQLDTV--------TCNIVVNGLCRNGELEKASEVVSEMWTDGT 499
Query: 212 -------PEMGL----------SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL 254
P GL PD ++Y +I+G C+ +L +A + +EM K +
Sbjct: 500 NSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHP- 558
Query: 255 DEVTY-----AYLMQG--------LSDED---------TYASLINAYCAQGELFKVLTLD 292
D VTY + QG L D + TY SLI ++G++F++ L
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM 618
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN- 351
DEM +G PD + +IN L + +TKD + LL + D S PN + LI+
Sbjct: 619 DEMRERGIHPDICTYNNMINCLCEGGKTKDATS-LLHEMLDKGVVS-PNVSSFKILIKAF 676
Query: 352 CSNNEFK----------SVVG--------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
C + +FK SV G + G +++A + LE +
Sbjct: 677 CKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNF 736
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+Y LI C+ + A+ + +++ G+ S + ++ L G
Sbjct: 737 MYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRG 784
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 30/240 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++++ D TY+ + C ++ + +L+ M G S +Y +I G +
Sbjct: 553 AKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIF 612
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTL 148
+ Y EM ++GI PD TY+++I LC + +A L EML P+ +F L
Sbjct: 613 EMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKIL 672
Query: 149 MHACCLEGEFSKAFH------------------MHHQMIHKGVLPDFVTGFSPAL----- 185
+ A C G+F A M ++++ G L D F +L
Sbjct: 673 IKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLL 732
Query: 186 ---FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
F Y +I LC GR+++A G+L+ + + G D S+I VI G + ++A EL
Sbjct: 733 SKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 46/316 (14%)
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
TG +P +T+N +I LC ++ A + M E G P+ + I++ GFC+ ++
Sbjct: 145 TGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQ 204
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLI 276
A E +D K+ ++ V Y L+ +D T+ S I
Sbjct: 205 ALEF---VDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRI 261
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSL----PDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+A C G++F+ + +M G L P+ V +L++ G ++ ++ ++ + +
Sbjct: 262 SALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKK 321
Query: 333 DYMYTSMPNYIIY-----------------DTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
+ S+ +Y + D ++EN S ++ ++ +
Sbjct: 322 GGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLD 381
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
A R D M+ PD Y L+ +C + V +A + EM+R G + ++ LL
Sbjct: 382 ARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLN 441
Query: 436 ALRDHGMYNERSWVIQ 451
+L G +E ++Q
Sbjct: 442 SLWKEGRKSEAEEMLQ 457
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 139/337 (41%), Gaps = 47/337 (13%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P+ TF L+ + C A + +M KG P+ FT ++ G C G
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPN--------KFTVGILVRGFCRAG 200
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
R ++AL + G +MG + + V Y ++S FC+ +A +L M K GL
Sbjct: 201 RTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEK---GL----- 250
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL----PDSVIDSLLINGLD 315
L D T+ S I+A C G++F+ + +M G L P+ V +L++ G
Sbjct: 251 ------LPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFC 304
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
++ ++ ++ + + + S+ +Y + ++GL+++ G + E
Sbjct: 305 QEGMMEEARSLVETMKKGGNFVSLESYNTW--------------LLGLLRN----GKLLE 346
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLT 435
D M+E +P+ YN+++ CR + A + MV G + LL
Sbjct: 347 GRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLH 406
Query: 436 ALRDHGMYNERSWVIQNTLR-SCNLNDSELHKVLNEI 471
G E ++ +R C+ N + +LN +
Sbjct: 407 GYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSL 443
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 187/442 (42%), Gaps = 59/442 (13%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+ D+ TYN +I +C ++ IL M E G++PD +SY + +G K+
Sbjct: 37 GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMH 150
+ EM Q GI PD ++Y+ L+ + EA +F+++ P ++ +++
Sbjct: 97 LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMIN 156
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G + A + + + GF P + TYNA+I+GLC R+ +A +L
Sbjct: 157 GLCKNGYVNNALMLFRNLRRR--------GFVPEVLTYNAMINGLCKARRLADARRVLNE 208
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK-----------VVWGL----- 254
+ G P+A++Y V+ + L + E+ EM RK VV L
Sbjct: 209 FCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGR 268
Query: 255 ----DEVTYAYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
DE+ + GL D +Y ++IN +C QG + L L DE+ +G D ++
Sbjct: 269 IEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTI 328
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
+I+GL K + + HL DYM T N + ++++++
Sbjct: 329 IIHGLCKDGNFEGAEKHL-----DYMNTLGFGFNLVAFNSILD---------------CL 368
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
G +++A + D+M D Y L+ + CR A + + + GF
Sbjct: 369 GKAGDIDKAVKVFDSM----EVKDSFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQILR 424
Query: 428 FSVLALLTALRDHGMYNERSWV 449
+ A++ L G+ E V
Sbjct: 425 ATQRAVIDGLTTSGLVYEARKV 446
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 28/234 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY ++K R+E+G+ IL M KG + D +Y V+ +A E +M
Sbjct: 220 TYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKM 279
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEF 158
G++PD +Y+++I C + R EA L E+ D T T ++H C +G F
Sbjct: 280 MSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNF 339
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPAL------------------------FTYNAIIHG 194
A M G + V F+ L FTY +++H
Sbjct: 340 EGAEKHLDYMNTLGFGFNLV-AFNSILDCLGKAGDIDKAVKVFDSMEVKDSFTYTSLLHN 398
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
LC + A +L E G + VI G + + +A ++K+++ R
Sbjct: 399 LCRAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEARKVKLKIQR 452
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + DLA+YN +I C R ++ + ++ + ++G+ D ++ +I G C +
Sbjct: 281 SNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFE 340
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
A + M+ G + ++S++ L + +A +F M D T+T+L+H
Sbjct: 341 GAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM-EVKDSFTYTSLLHNL 399
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
C +F ++ K ++ GF T A+I GL G V EA
Sbjct: 400 CRAKKF--------RIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEA 443
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 33/314 (10%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R + ++ I ++ T++ ++ C ++ ++ + +L M +KG+ P+ ++Y ++ G+
Sbjct: 168 RLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGY 227
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C KA M Q+G+ P+ + Y+ +I LC K+R+ EA +LF+EM PD
Sbjct: 228 CLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDV 287
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+T+ L+ C G+ S + + +M G D + TYN+++H LC ++
Sbjct: 288 VTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDII--------TYNSLLHALCKNHHLD 339
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY----ELKVEMDRKVVWGLDEVT 258
+A+ +++ + + G+ P+ +Y +I G C++ L AY E+ E VW
Sbjct: 340 QAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVW------ 393
Query: 259 YAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
TY +IN C +G + L L M +PD+V +I L +K
Sbjct: 394 ------------TYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441
Query: 319 RTKDTKAHLLLIIA 332
T T L +I
Sbjct: 442 ETVKTNKLLCAMIV 455
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 188/471 (39%), Gaps = 89/471 (18%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
+ + + FR + NG I+ + T ++ +C + IL
Sbjct: 24 NHYPTAISLFRQLEFNG-------------IKPSIVTLTILMNCYCHTGGITFLFSILTK 70
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ---KGILPDAFTYSSLIQALCS 122
+ + G P+++++ +I G C N G+AYE L D G D +Y+ L+ LC
Sbjct: 71 ILKMGYEPNSITFTTLIKGMCLN---GQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
Query: 123 KRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEF-SKAFHMHHQMIHKGVLPDFVT-- 179
A + ++ D + ++T++ + C +G+F + A+ ++ +MI KG+ P+ T
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTIIDSLC-KGKFVTDAYRLYSEMIAKGIFPNVYTFS 186
Query: 180 -------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G P + TY AI+ G C + +V +AL I M +
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------- 267
G+ P+ Y I+I+G C+ + + +A L EM K + D VTY L+ GL
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKI-NPDVVTYNILIDGLCKLGKIST 305
Query: 268 ---------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
D TY SL++A C L + +TL E+ +G P+ + LI+
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
GL K R +D Y+I+ ++ + + ++ +GL
Sbjct: 366 GLCKDGRLEDA------------------YVIFQEILTEGYHITVWTYNVMINGLCKKGL 407
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+EA M + PD Y +I+ + K + M+ G
Sbjct: 408 FDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 33/253 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TY I+ +CL+ +V K + I M ++G+ P+ Y +I G C + +
Sbjct: 211 KGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDE 270
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A EM K I PD TY+ LI LC ++S + L EM S D IT+ +L+H
Sbjct: 271 AMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLH 330
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
A C +A + ++ +G+ P+ T G+
Sbjct: 331 ALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHI 390
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
++TYN +I+GLC G +EAL +L M + PDAVSY +I + E K +L
Sbjct: 391 TVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLL 450
Query: 244 VEMDRKVVWGLDE 256
M +V GL +
Sbjct: 451 CAM---IVRGLSK 460
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 171/415 (41%), Gaps = 57/415 (13%)
Query: 66 MAEKGLSPDALSYRYVITGFCN-NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
M + +P L + +++ N P F+ +++ GI P T + L+ C
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFR-QLEFNGIKPSIVTLTILMNCYCHTG 59
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
++ + + ++L P+ ITFTTL+ CL G+ +A H ++ G D V+
Sbjct: 60 GITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVS-- 117
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
Y +++GLC +G A+ +LR + ++ D V Y +I C+ + + AY
Sbjct: 118 ------YAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYR 168
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TYASLINAY 279
L EM K ++ + T++ L+ L + TY ++++ Y
Sbjct: 169 LYSEMIAKGIFP-NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGY 227
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C ++ K L + + M +G P+ +++INGL KK R + + L +
Sbjct: 228 CLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEA---MNLFKEMHWKKIN 284
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
P+ + Y+ LI+ GL K G ++ + D M D YN L+
Sbjct: 285 PDVVTYNILID-----------GLCK----LGKISTSLELVDEMRSIGKTVDIITYNSLL 329
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
C+ ++ +A + E+ G ++ + L+ L G + + Q L
Sbjct: 330 HALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEIL 384
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 165/395 (41%), Gaps = 47/395 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D Y II C +VE + + M E G+ PD +Y +I G C + A+
Sbjct: 190 VPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAF 249
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
EF EM I P +TYS+L+ LC ++R+ E+ L M+ PD F TLM
Sbjct: 250 EFFKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLMEGH 309
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR--VEEALGILRG 210
C + KA + + + +G+ PD +++YN + GL G EE L +
Sbjct: 310 CSLHQMQKAKRIFYSLPQRGITPD--------IYSYNILFKGLLSQGLNIPEETLPLFED 361
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M +SPD ++Y +I G C + A++ EM K + D
Sbjct: 362 MKSKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQ--------------PDAA 407
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL-L 329
TY L+ A C + ++ + + L + +S +G D+ ++LI+ K R + +A
Sbjct: 408 TYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAAQATFWDA 467
Query: 330 IIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
Y T +++ L C N+ F + ++ +G
Sbjct: 468 FKKGYDLTLAVFHVMLKGL---CENHMFDEAIKILSKMKKKGCT---------------- 508
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
P+ A+Y ++++ + KA + EM R GF+
Sbjct: 509 PNKAIYEVIVYALFENDEIEKATKLVYEMSRMGFL 543
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 40/316 (12%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
+ D+F A + F+ MV N I + TY+ ++ C +RV + +L
Sbjct: 241 ISDNFKAAFEFFKEMVSN-------------EINPTVYTYSALMAYLCKRKRVRESKALL 287
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
M + GL PD + ++ G C+ KA + Q+GI PD ++Y+ L + L S+
Sbjct: 288 NTMIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQ 347
Query: 124 --RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
E LF++M S PD IT+ T++H C A+ +M+ KG+ PD
Sbjct: 348 GLNIPEETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAA 407
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
TYN ++ LC +++EA+ + + G+ DA ++ I+I F ++
Sbjct: 408 --------TYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEA 459
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A + +K + L + +++GL + + E K+L+ +M K
Sbjct: 460 AQATFWDAFKK-GYDLTLAVFHVMLKGLCENHMF----------DEAIKILS---KMKKK 505
Query: 299 GSLPDSVIDSLLINGL 314
G P+ I +++ L
Sbjct: 506 GCTPNKAIYEVIVYAL 521
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 167/412 (40%), Gaps = 42/412 (10%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+++ + T N ++ ++ + + + G P+ +++ ++ C N A
Sbjct: 85 NMKPNFHTINILLNCFAQAKKANLAFSMFAKLLKLGYEPNIITFNSLLKAMCFNGEVQMA 144
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLMHAC 152
+ ++ + G+ +Y +LI LC R A + ++M PPD I + T++
Sbjct: 145 LDLHDKLKKAGVPLTIVSYGTLISGLCKINRHDAAMLVLKKMKVCVPPDAIIYKTIIDCL 204
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + A ++ +MI G+ PD +FTY +IHGLC + A + M
Sbjct: 205 CKDSKVETALELYTEMIESGIFPD--------VFTYTTLIHGLCISDNFKAAFEFFKEMV 256
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
++P +Y +++ C+ + +R E K ++ + GL+ D +
Sbjct: 257 SNEINPTVYTYSALMAYLCKRKRVR---ESKALLNTMIKDGLE-----------PDLAIF 302
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+L+ +C+ ++ K + + +G PD ++L GL + + L +
Sbjct: 303 NTLMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGL--NIPEETLPLFE 360
Query: 333 DYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
D + P+ I Y+T+I N FS ++ A M++ +PD
Sbjct: 361 DMKSKKVSPDLITYNTIIHGMCN------------FSR---MDCAWDFIGEMVDKGIQPD 405
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMY 443
A YN L+ CR + +A + + G ++ L+ A G +
Sbjct: 406 AATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRF 457
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 126/333 (37%), Gaps = 62/333 (18%)
Query: 138 SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------------ 179
S P I F +H+ ++ F + M + P+F T
Sbjct: 51 SSPRIIEFNNRLHSLVMQKNFDSVVTHYRSMELNNMKPNFHTINILLNCFAQAKKANLAF 110
Query: 180 ---------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
G+ P + T+N+++ +CF G V+ AL + + + G+ VSY +ISG
Sbjct: 111 SMFAKLLKLGYEPNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGL 170
Query: 231 CQ-NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
C+ NR LK KV D + Y ++I+ C ++ L
Sbjct: 171 CKINRHDAAMLVLK---KMKVCVPPDAIIYK-------------TIIDCLCKDSKVETAL 214
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
L EM G PD + LI+GL I+D + + + ++
Sbjct: 215 ELYTEMIESGIFPDVFTYTTLIHGL---------------CISDNFKAA---FEFFKEMV 256
Query: 350 ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
N N + L+ R V E+ +TM++ +PD A++N L+ HC +
Sbjct: 257 SNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLMEGHCSLHQMQ 316
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
KA ++ + + G ++S L L G+
Sbjct: 317 KAKRIFYSLPQRGITPDIYSYNILFKGLLSQGL 349
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 11/187 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + DL TYN II C R++ + M +KG+ PDA +Y ++ C +
Sbjct: 364 SKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKID 423
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLM 149
+A + +GI DA+T++ LI A R A F + D+T F ++
Sbjct: 424 EAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAAQATFWDAFKKGYDLTLAVFHVML 483
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C F +A + +M KG P+ Y I++ L +E+A ++
Sbjct: 484 KGLCENHMFDEAIKILSKMKKKGCTPNKA--------IYEVIVYALFENDEIEKATKLVY 535
Query: 210 GMPEMGL 216
M MG
Sbjct: 536 EMSRMGF 542
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
AA + + ++ TY+ ++ +CL++ V K I MA+ G++PD SY +I GFC
Sbjct: 15 AAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKI 74
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITF 145
+ A EM + I+P+ TY+SLI LC ++S A L EM PPD IT+
Sbjct: 75 KMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITY 134
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
++L+ A C KA + ++ +G+ P+ ++TY +I+GLC GR E+A
Sbjct: 135 SSLLDALCKNHPGDKAIALLTKLKDQGLQPN--------MYTYTILINGLCKGGRPEDAQ 186
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
I + G + + +Y ++I FC N +A + +M+ + VTY +++
Sbjct: 187 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIP-NAVTYEIIIRS 245
Query: 266 LSDED 270
L D+D
Sbjct: 246 LFDKD 250
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C EG+ +A ++ M+ KG F P + TY++++ G C + V +A I M
Sbjct: 2 CKEGKVKEAKNVFAAMMKKG--------FKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMA 53
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGLSDEDT 271
+ G++PD SY I+I+GFC+ + A L EM RK++ + T
Sbjct: 54 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVV---------------T 98
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y SLI+ C G++ L L DEM +G PD + S L++ L K D LL +
Sbjct: 99 YNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKN-HPGDKAIALLTKL 157
Query: 332 AD-------YMYTSMPNYI-----------IYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
D Y YT + N + I++ L+ N + ++ F G+
Sbjct: 158 KDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMF 217
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
EA M E P+ Y ++I + KA + +EM+ G +
Sbjct: 218 GEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 268
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 85 FCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PD 141
FC +A M +KG P+ TYSSL+ C + +++A +F M PD
Sbjct: 1 FCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPD 60
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV 201
++ L++ C A ++ +M + ++P+ V TYN++I GLC G++
Sbjct: 61 IQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVV--------TYNSLIDGLCKSGKI 112
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
AL ++ M + G PD ++Y ++ C+N KA L ++ + GL Y Y
Sbjct: 113 SYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQ---GLQPNMYTY 169
Query: 262 ------LMQGLSDED------------------TYASLINAYCAQGELFKVLTLDDEMSH 297
L +G ED TY +I+ +C G + L + +M
Sbjct: 170 TILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEE 229
Query: 298 KGSLPDSVIDSLLINGL-DKKARTKDTKAHLLLI 330
G +P++V ++I L DK K K L +I
Sbjct: 230 NGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMI 263
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ +Q ++ TY +I C R E I + KG + + +Y +I FCNN G+
Sbjct: 160 QGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGE 219
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M++ G +P+A TY +I++L K +A L EM++
Sbjct: 220 ALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMIT 264
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY+SL++ YC E+ K ++ + M+ G PD ++LING + K T A + L
Sbjct: 28 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGF---CKIKMTDAAMNLF 84
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+ +PN + Y++LI+ GL KS G ++ A + D M + P
Sbjct: 85 EEMHCRKIIPNVVTYNSLID-----------GLCKS----GKISYALKLVDEMHDRGQPP 129
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
D Y+ L+ C+ KA + ++ G +M++ L+ L G + +
Sbjct: 130 DIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIF 189
Query: 451 QNTL-RSCNLN 460
++ L + N+N
Sbjct: 190 EDLLVKGYNIN 200
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 223/520 (42%), Gaps = 80/520 (15%)
Query: 7 SFTATLKTFRHMVRNGVV----CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
S T+ + F + R G++ C F N + ++ +L ++N ++ HC + V
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLN-DGVEPNLISFNTMVNAHCKIGNVVVAKAY 212
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
G+ + G D+ +Y +I G+C G AY+ M Q+G L + +Y++LI C
Sbjct: 213 FCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCE 272
Query: 123 KRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
++ EA LF +M PD T+T L+ A C G+ ++A +M+ G+ P+ T
Sbjct: 273 VGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT 332
Query: 180 ---------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G ++ +NA+I G C G +E+A+ +L M
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGL----- 266
+ P++ +Y +I GFC+ + + +A L +M + K+ L VTY L+ GL
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL--VTYNTLIHGLCKARV 450
Query: 267 -----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
D+ T+ + I+ C G++ + + + + K + + + +
Sbjct: 451 VDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTA 510
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
LI+G K + D AHLL + PN I ++ L++ GL K
Sbjct: 511 LIDGYCKAEKFSD--AHLLFKRMLF-EGCFPNSITFNVLLD-----------GLRK---- 552
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM-EMVRYGFVSHMF 428
G V +A D M + + KP Y +LI + R + +A NM++ +M+ G ++
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA-NMFLDQMISSGCQPNVV 611
Query: 429 SVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
+ A + A G E ++ L DS ++ VL
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVL 651
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 204/475 (42%), Gaps = 58/475 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TYN++I C + +++ + +L M E LSP+ ++Y +I G C R A+ M
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM 461
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ---EMLSPPDDITFTTLMHACCLEGEF 158
+ G +PD T+ + I LC ++ +A+ +F+ E + ++ +T L+ C +F
Sbjct: 462 IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKF 521
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
S A + +M+ +G P+ +T +N ++ GL G+VE+A+ ++ M + P
Sbjct: 522 SDAHLLFKRMLFEGCFPNSIT--------FNVLLDGLRKEGKVEDAMSLVDVMGKFDAKP 573
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE--VTY-----AYLMQG------ 265
+Y I+I + + +A + +D+ + G VTY AY QG
Sbjct: 574 TVHTYTILIEEILRESDFDRA---NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAE 630
Query: 266 -----------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN-- 312
L D Y L+NAY G+L + M G P S+L+
Sbjct: 631 EMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL 690
Query: 313 ----------GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
GLD + + IAD+ +M +++ ++E +
Sbjct: 691 IFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM----LFEKMVEQGCVPNVNTYSK 746
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHK-AYNMYMEMVRY 421
L+K ++ A R + M E P ++N L+ C +L +H+ A + M+ Y
Sbjct: 747 LIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLL-SSCCKLGMHEEALRLLDSMMEY 805
Query: 422 GFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLN-DSELHKVLNEIDTRK 475
++H+ S L+ L + G E++ I +L SC N D + KVL + RK
Sbjct: 806 NHLAHLESYKLLVCGLFEQG-NQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRK 859
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 44/266 (16%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S Q ++ TY IK +C R+ + ++ + E+G+ D+ Y ++ + C G
Sbjct: 603 SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY---GCIG 659
Query: 93 K---AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY------------------- 130
+ A+ + M G P TYS L++ L ++ E
Sbjct: 660 QLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKI 719
Query: 131 -------HLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
LF++M+ P+ T++ L+ C S AF + + M G+
Sbjct: 720 ADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGI------- 772
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
SP+ +N+++ C LG EEAL +L M E SY +++ G + KA
Sbjct: 773 -SPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAE 831
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGL 266
E+ + + DEV + L+ GL
Sbjct: 832 EIFRSL-LSCGYNYDEVVWKVLLDGL 856
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 191/431 (44%), Gaps = 43/431 (9%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F+ + IQ DL T+N +I C + + +L + + G PD ++ +I G C
Sbjct: 86 FSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLC 145
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE---MLSPPDDI 143
N +A F ++ KG D +Y +LI LC A + ++ +L P+ +
Sbjct: 146 LNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVV 205
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
+ T++ + C + A + +MI K + PD VT Y +I+G +GR++E
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVT--------YTTLIYGCLIVGRLKE 257
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A+G+ M + PD ++ I++ G C+ E++KA + M ++ G+D
Sbjct: 258 AVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ---GVD-------- 306
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
S+ TY SL++ Y + K + + M+ +G PD S++INGL +TK
Sbjct: 307 ---SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGL---CKTKMV 360
Query: 324 KAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
+ L + + PN + Y++LI+ GL+K G +++A + M
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLID-----------GLLK----YGRISDAWDLVNEM 405
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMY 443
D Y+ L+ C+ V KA + ++ G ++++ L+ L +G
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465
Query: 444 NERSWVIQNTL 454
+ V Q+ L
Sbjct: 466 KDAQAVYQDLL 476
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A F +M+ K I PD FT++ LI C L+ A+ + ++ PD +T TTL+
Sbjct: 83 AISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIK 142
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
CL G+ +A H H +I KG D V +Y +I+GLC G AL +LR
Sbjct: 143 GLCLNGKVREALHFHDDVIAKGFHLDQV--------SYGTLINGLCKTGETRAALQVLRK 194
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ + + P+ V Y +I C+++ + A +L EM K ++ D
Sbjct: 195 IDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF--------------PDVV 240
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +LI G L + + L ++M K PD ++L++GL K+ K + L ++
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
I + + N + Y++L++ LVK N+A +TM P
Sbjct: 301 IKQGVDS---NIVTYNSLMDG---------YFLVKQ------ENKATFVFNTMARRGVTP 342
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
D Y+++I C+ V +A N++ EM + + +L+ L +G ++ +W +
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISD-AWDL 401
Query: 451 QNTLRS 456
N + +
Sbjct: 402 VNEMHN 407
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 122/240 (50%), Gaps = 12/240 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TYN ++ + L+++ K + MA +G++PD SY +I G C + +
Sbjct: 303 QGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDE 362
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A EM K + P+ TY+SLI L R+S+A+ L EM + P D IT+++L+
Sbjct: 363 AVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLD 422
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + KA + ++ +G+ P+ ++TY ++ GLC GR+++A + +
Sbjct: 423 ALCKNHQVDKAITLITKIKDQGIQPN--------IYTYTILVDGLCKNGRLKDAQAVYQD 474
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G D Y ++++G C+ +A L +M+ D VTY L++ L + D
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIP-DAVTYETLVRALFEND 533
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 143/285 (50%), Gaps = 27/285 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I+ D+ T+N ++ C ++K +L M ++G+ + ++Y ++ G+ + K
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A M ++G+ PD +YS +I LC + + EA +LF+EM S P+ +T+ +L+
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G S A+ + ++M ++G D + TY++++ LC +V++A+ ++
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVI--------TYSSLLDALCKNHQVDKAITLITK 439
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + G+ P+ +Y I++ G C+N L+ A + ++ L++G D
Sbjct: 440 IKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDL---------------LIKGYHLDV 484
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y ++N C +G + L+L +M G +PD+V L+ L
Sbjct: 485 KMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+S+ + TYN +I R+ ++ M +G D ++Y ++ C N
Sbjct: 371 HSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTL 148
KA ++ +GI P+ +TY+ L+ LC RL +A ++Q++L D + +
Sbjct: 431 DKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVM 490
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ C EG F +A + +M G +PD V TY ++ L + ++A+ +L
Sbjct: 491 VNGLCKEGLFDEALSLVSKMEDNGCIPDAV--------TYETLVRALFENDKNDKAVKLL 542
Query: 209 RGMPEMG 215
R M G
Sbjct: 543 REMIVQG 549
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIH----------------GLCFLGRVEEALGIL 208
H ++ + LP F+ A+ ++N I+H L L A+
Sbjct: 28 HSRLYYTQPLPSFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFS 87
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ M + PD ++ I+I+ FC L A+ + ++ K+ + D VT L++GL
Sbjct: 88 KQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKI-FKLGFHPDTVTITTLIKGL-- 144
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
C G++ + L D++ KG D V LINGL +T +T+A L
Sbjct: 145 -----------CLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL---CKTGETRAALQ 190
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-------------CSNNEFKSVVGLVKSFS------- 368
++ PN ++Y+T+I++ CS K + V +++
Sbjct: 191 VLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCL 250
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMF 428
+ G + EA + ML N KPD +N+L+ C+ + KA N+ M++ G S++
Sbjct: 251 IVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIV 310
Query: 429 SVLALLTALRDHGMYNERSWVIQNTLR 455
+ +L+ N+ ++V R
Sbjct: 311 TYNSLMDGYFLVKQENKATFVFNTMAR 337
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 11/217 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ + TYN ++ + L+++V K I MA+ G+SPD SY +I GFC + +
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A E EM K I+P+ TYSSLI LC ++S A L EM PP+ +T+++++
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C + A + QM ++G+ P+ ++TY +I GLC G++E+A +
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPN--------MYTYTILIKGLCQSGKLEDARKVFED 377
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
+ G + + +Y ++I GFC +A L +M+
Sbjct: 378 LLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 192/442 (43%), Gaps = 69/442 (15%)
Query: 28 TAARNSESIQQDLATYNKIIKQHCLMQRVE--KGVGIL-------------RGMAEKGLS 72
T N+ + ++ +N++++Q+ +E K +G L + M +G+
Sbjct: 35 TTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIK 94
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR------- 125
P+ ++ +I FC A+ ++ + G P+ T ++LI+ LC +
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 126 ---LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
L +A LF +M+ PD TFT L+ C EG +A ++ M+ +
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMM--------IQ 206
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P + TYN+++ G + +V +A I M ++G+SPD SY I+I+GFC+ + + +A
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEA 266
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
EL EM K Q + + TY+SLI+ C G++ L L DEM +G
Sbjct: 267 MELLKEMHHK--------------QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY-------------- 345
P+ V S +++ L K + + A L + + +M Y I
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372
Query: 346 ----DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
D L++ + N + V +++ F +GL +EA M + P+ Y ++I
Sbjct: 373 KVFEDLLVKGHNLNVYTYTV-MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILS 431
Query: 402 HCRRLNVHKAYNMYMEMVRYGF 423
++ A + EM+ F
Sbjct: 432 LFKKDENEMAEKLLCEMIETNF 453
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 122/310 (39%), Gaps = 66/310 (21%)
Query: 132 LFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
L Q+ +PP+ I F ++ + + ++ +M +G+ P+ V N +
Sbjct: 53 LLQQNPTPPN-IEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN--------CNIL 103
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I+ C LG + A +L + +MG P+ ++ +I G C N ++
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIH-------------- 149
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
+ +C G+L + L ++M + PD ++L+
Sbjct: 150 -------------------------DKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
+G K+ R K+ K L +++ + P + Y++L++ + +
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGI---KPGVVTYNSLMD---------------GYFLVK 226
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
VN+A +TM + PD Y++LI C+ + +A + EM + ++ +
Sbjct: 227 QVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286
Query: 432 ALLTALRDHG 441
+L+ L G
Sbjct: 287 SLIDGLCKSG 296
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 191/478 (39%), Gaps = 109/478 (22%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
++ + TY+ ++ +C + +E +L+ M ++ + P+ +++ +I G+ KA
Sbjct: 450 NLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKA 509
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQAL---------------CSKRRLSEAYHLFQEMLS- 138
+ EM Q+ I+P+ F Y+ LI A RL E+ +F +L+
Sbjct: 510 VDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEIKVHRLEESNVIFDILLNN 569
Query: 139 ----------------------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
PD + +T+L+ EG S A + +M K D
Sbjct: 570 LKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFD 629
Query: 177 FVT--------------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
V G +P TYN II+ C G +E+ALGIL
Sbjct: 630 VVACNTLIKGLLRLGKYDPQNVCSRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIE 689
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLS- 267
M G+ P+AV+Y I+I G C+ +++KA ++ EM +V G+ +T+ +L++ S
Sbjct: 690 MKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEM---LVMGVVPTPITHKFLVKAYSR 746
Query: 268 --DEDT-------------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
DT Y +LI C G K + DEM +G D V
Sbjct: 747 FKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVT 806
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
+ LI G + + L + D + PN Y+TL+ SN
Sbjct: 807 YNALIRGYCTGSHVEKAFKTYLQMFVDGI---SPNITTYNTLLWGLSN------------ 851
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
GL+ + M E + P+ A Y++L+ + R N ++ Y EM+ GFV
Sbjct: 852 ---AGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYREMLTKGFV 906
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 46/295 (15%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TYN II +C+ +E +GIL M G+ P+A++Y +I G C KA + E
Sbjct: 665 VTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNE 724
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFT---TLMHACCLEGE 157
M G++P T+ L++A ++ + +++ +T T TL+ C G
Sbjct: 725 MLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGM 784
Query: 158 FSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNA 190
KA + +M+ +G+ D+VT G SP + TYN
Sbjct: 785 TRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNT 844
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV 250
++ GL G ++ I+RGM E G P+A +Y I++SG+ + ++ + EM
Sbjct: 845 LLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYREM---- 900
Query: 251 VWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
L +G + TY LIN + G + K L +EM KG +P+S
Sbjct: 901 -----------LTKGFVPTTGTYNVLINCFAKAGRMHKAGELFNEMRTKGRIPNS 944
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 157/358 (43%), Gaps = 60/358 (16%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D T N ++K +C + V ++ + + G++ D + +I G+C +A +
Sbjct: 190 DSITCNILVKGYCRIGFVRYAEWVMYNLVDGGVTKDVIGLNTLIDGYCECGLMSQAMDLM 249
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-------------------- 138
+ + + D TY++L++A C L A LF E+ +
Sbjct: 250 EKRWRGDVEIDVVTYNTLLKAFCKMGDLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIR 309
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P +T+TTL+ A C ++ + QMI G++ D VT ++I++ LC
Sbjct: 310 NLQPTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIMSDVVTC--------SSILYALC 361
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL-- 254
G++ EA + M EMGL P+ VSY +I+ ++ + +A+ L+ +M VV G+
Sbjct: 362 RHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM---VVRGVSF 418
Query: 255 DEVTYAYLMQGL--------SDE--------------DTYASLINAYCAQGELFKVLTLD 292
D VT +M GL ++E TY++L++ YC GE+ +
Sbjct: 419 DIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVL 478
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
+M + P+ + S +ING KK L ++ + MPN +Y LI+
Sbjct: 479 QKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNI---MPNTFVYAILID 533
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/544 (20%), Positives = 207/544 (38%), Gaps = 115/544 (21%)
Query: 11 TLKTFRHMVRNGVVCRFTAARNSES---------IQQDLATYNKIIKQHCLMQRVEKGVG 61
TL T+ ++ C+F S S I D+ T + I+ C ++ +
Sbjct: 314 TLVTYTTLI--SAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAV 371
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+ M E GL P+ +SY +I + +A+ + +M +G+ D T ++++ L
Sbjct: 372 FFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLF 431
Query: 122 SKRRLSEAYHLFQEMLS--------------------------------------PPDDI 143
R+ EA +F+ +L PP+ I
Sbjct: 432 KVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVI 491
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP------------------DFVTGFSPAL 185
TF+++++ +G SKA + +M+ + ++P D G+ +
Sbjct: 492 TFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEI 551
Query: 186 ---------FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNREL 236
++ +++ L +GR++ A +++ M G+ PD V+Y +I G+ +
Sbjct: 552 KVHRLEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNE 611
Query: 237 RKAYELKVEMDRKVVWGLDEVTYAYLMQGL---------------------SDEDTYASL 275
A + EM K D V L++GL + TY ++
Sbjct: 612 SAALSIVQEMTEKNTR-FDVVACNTLIKGLLRLGKYDPQNVCSRMIELGLAPNCVTYNTI 670
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK----------- 324
IN+YC +G + L + EM G +P++V ++LI GL K +
Sbjct: 671 INSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGV 730
Query: 325 -----AHLLLIIADYMYTSMPNYI-IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
H L+ A + + I++ LI+ L+ G+ +A
Sbjct: 731 VPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKV 790
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
D M++ D YN LI +C +V KA+ Y++M G ++ + LL L
Sbjct: 791 VLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLWGLS 850
Query: 439 DHGM 442
+ G+
Sbjct: 851 NAGL 854
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 172/411 (41%), Gaps = 43/411 (10%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHM 164
G++PD F+ + L+ +LC L A + D++T+ T++ C +G + F +
Sbjct: 120 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNN-DVIDNVTYNTVIWGFCQKGLVDQGFGL 178
Query: 165 HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
+M+ +G+ D +T N ++ G C +G V A ++ + + G++ D +
Sbjct: 179 LSEMVKRGLCVDSITC--------NILVKGYCRIGFVRYAEWVMYNLVDGGVTKDVIGLN 230
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLD-EVTYAYLMQGLSDEDTYASLINAYCAQG 283
+I G+C+ + +A +L M+++ W D E+ D TY +L+ A+C G
Sbjct: 231 TLIDGYCECGLMSQAMDL---MEKR--WRGDVEI----------DVVTYNTLLKAFCKMG 275
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI 343
+L + +L +E+ D + ++ ++ + + + LI A + + +
Sbjct: 276 DLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESL 335
Query: 344 -IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
+ + +I N ++ + ++ + G + EAA M E P+ Y +I
Sbjct: 336 SLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSL 395
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR------- 455
+ V +A+N+ +MV G + + ++ L E + + L+
Sbjct: 396 FKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNC 455
Query: 456 ---------SCNLNDSELHK-VLNEIDTRKFPPIGATLLDVLAEIAMDGLL 496
C L + EL + VL ++ PP T ++ A G+L
Sbjct: 456 VTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGML 506
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
L YN +I C + K +L M ++G+S D ++Y +I G+C KA++ L
Sbjct: 769 LTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYL 828
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+M GI P+ TY++L+ L + + + + M P+ T+ L+ G
Sbjct: 829 QMFVDGISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVG 888
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
++ + +M+ K GF P TYN +I+ GR+ +A + M G
Sbjct: 889 NKEESTKFYREMLTK--------GFVPTTGTYNVLINCFAKAGRMHKAGELFNEMRTKGR 940
Query: 217 SPDAVSYIIV 226
P++ +Y I+
Sbjct: 941 IPNSSTYDIL 950
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 41/379 (10%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
C M + +LR + K ++ + + + +I C ++ AY EM K I PD
Sbjct: 110 CKMGETRAALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDV 169
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQ 167
T+SSLI C + +A+ LF EM+ D TF L+ A C EG+ A ++
Sbjct: 170 VTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAV 229
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
M+ +GV+PD VT Y +++ G C + V +A + + +MG++PDA +Y I+I
Sbjct: 230 MMKEGVIPDVVT--------YGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMI 281
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
+GFC+ + + +A L EM R+ G+ T TY SLI+ C G +
Sbjct: 282 NGFCKIKMVDEALSLFDEMRRR---GIAPNTV-----------TYNSLIDGLCKSGRIPY 327
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
L D M + G D + LI+ L K H+ I MYT Y+
Sbjct: 328 AWELVDTMHNNGQPADIFTYNSLIDALCK-------NHHIDQGIQPDMYT-------YNI 373
Query: 348 LIEN-CSNNEFKSVVGLVKSFSMR-GLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
LI+ C K+ + + ++ GL +E M + PD Y +I +
Sbjct: 374 LIDGLCKGGRLKNAQDIFQDLLIKEGLFDEVDALMSKMDDNGIIPDAVTYVTIIRALFHK 433
Query: 406 LNVHKAYNMYMEMVRYGFV 424
+A + EM+ G +
Sbjct: 434 DENEQAEKLLREMIARGLL 452
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I ++ +N II C + V G+ M K + PD +++ +I GFC A+
Sbjct: 130 INTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAF 189
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
EM K I D +T++ L+ ALC + + A +L M+ PD +T+ +LM
Sbjct: 190 RLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGY 249
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CL E +KA H+ + + GV PD TY+ +I+G C + V+EAL + M
Sbjct: 250 CLVNEVNKAKHVFNIISQMGVAPD--------AHTYSIMINGFCKIKMVDEALSLFDEMR 301
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
G++P+ V+Y +I G C++ + A+EL M +D TY
Sbjct: 302 RRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNN--------------GQPADIFTY 347
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
SLI+A C + +G PD ++LI+GL K R K+ +
Sbjct: 348 NSLIDALCKNHHI-----------DQGIQPDMYTYNILIDGLCKGGRLKNAQ 388
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 39/238 (16%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A E + D+ TY ++ +CL+ V K + +++ G++PDA +Y +I GFC
Sbjct: 228 AVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKI 287
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
+ +A EM ++GI P+ TY+SLI LC R+ A+ L M + P D T+
Sbjct: 288 KMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFTY 347
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ A C HH I +G+ PD ++TYN +I GLC GR++ A
Sbjct: 348 NSLIDALCKN---------HH--IDQGIQPD--------MYTYNILIDGLCKGGRLKNAQ 388
Query: 206 GILRG-----------------MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
I + M + G+ PDAV+Y+ +I E +A +L EM
Sbjct: 389 DIFQDLLIKEGLFDEVDALMSKMDDNGIIPDAVTYVTIIRALFHKDENEQAEKLLREM 446
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 33/310 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I D+ T++ +I C++ + + + M K ++ D ++ ++ C
Sbjct: 162 AKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVK 221
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ---EMLSPPDDITFTTLM 149
A M ++G++PD TY SL+ C +++A H+F +M PD T++ ++
Sbjct: 222 VAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMI 281
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C +A + +M +G+ P+ V TYN++I GLC GR+ A ++
Sbjct: 282 NGFCKIKMVDEALSLFDEMRRRGIAPNTV--------TYNSLIDGLCKSGRIPYAWELVD 333
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--- 266
M G D +Y +I C+N + + + D TY L+ GL
Sbjct: 334 TMHNNGQPADIFTYNSLIDALCKNHHIDQGIQ------------PDMYTYNILIDGLCKG 381
Query: 267 ----SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+ +D + L+ +G +V L +M G +PD+V +I L K +
Sbjct: 382 GRLKNAQDIFQDLL---IKEGLFDEVDALMSKMDDNGIIPDAVTYVTIIRALFHKDENEQ 438
Query: 323 TKAHLLLIIA 332
+ L +IA
Sbjct: 439 AEKLLREMIA 448
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD 255
C +G AL +LR + ++ + V + +I C+++ + AY L EM K ++
Sbjct: 110 CKMGETRAALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIY--- 166
Query: 256 EVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
D T++SLI +C G+ L EM K D ++L++ L
Sbjct: 167 -----------PDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALC 215
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVN 374
K+ K K L +++ + + +P+ + Y +L++ C NE VN
Sbjct: 216 KEGDVKVAKNLLAVMMKEGV---IPDVVTYGSLMDGYCLVNE----------------VN 256
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+A + + + PD Y+++I C+ V +A +++ EM R G + + +L+
Sbjct: 257 KAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLI 316
Query: 435 TALRDHGMYNERSWVIQNTLRS 456
L G +W + +T+ +
Sbjct: 317 DGLCKSGRI-PYAWELVDTMHN 337
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 187/452 (41%), Gaps = 73/452 (16%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCR--------FTAARNSESIQQDLATYNKIIKQHCLM 53
K+L+ + T TF +++ G+ + F ++ D +Y +I C +
Sbjct: 121 KILKKGYHPTAITFNTLIK-GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKV 179
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
R+ + +L+ + K + P+A+ Y +I C + A++ +M K I PD FTY
Sbjct: 180 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTY 239
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
++LI + +L+ A LF +M P+ TF L+ C EG+ + A + M+
Sbjct: 240 NALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+ PD V TYN+++ G C + +V +A I M G+ + Y +++GF
Sbjct: 300 DDIKPDVV--------TYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351
Query: 231 CQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
C+ + + +A L EM RK++ + TY+SLI+ C G +F L
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNV---------------VTYSSLIDGLCKLGRIFYAL 396
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
L DEM +G P+ V S +++ L K A L + + M Y I
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI----- 451
Query: 350 ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
L+K G + +A + +L Y D Y ++I C +
Sbjct: 452 -------------LIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK---- 494
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
GF LALL+ + D+G
Sbjct: 495 ------------GFFD---KALALLSKMEDNG 511
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 186/410 (45%), Gaps = 49/410 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +IK CL + + + + +G D +SY +I G C A + +
Sbjct: 133 TFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 192
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
D K + P+A Y+ +I +C + +++A+ L+ +M++ PD T+ L+ +
Sbjct: 193 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKL 252
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+ A + ++M + + +P ++T+N ++ G C G+V +A +L M + + P
Sbjct: 253 NYAIDLFNKMKKENI--------NPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP 304
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
D V+Y ++ G+C ++ KA ++ D G+ +++ Y +++N
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDI---FDSMASGGV-----------IANVQIYTTMVNG 350
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT- 337
+C + + + L +EM + +P+ V S LI+GL K R L + D M+
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI-----FYALKLVDEMHDR 405
Query: 338 -SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
PN + Y ++++ C N+ + L+ + +G+ +PD Y
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI----------------RPDMYTY 449
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+LI C+ + A N++ +++ G+ +++ ++ D G +++
Sbjct: 450 TILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 70/343 (20%)
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------ 179
+S HL P F ++ + S A +H QM G+ DF T
Sbjct: 45 ISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILIN 104
Query: 180 ---------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
G+ P T+N +I GLC G + +AL + G
Sbjct: 105 CFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHL 164
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------------ 266
D VSY +I+G C+ + A +L +D K+V + V Y ++ +
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP-NAVMYNMIIDNMCKAKLVNDAFDL 223
Query: 267 ----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
D TY +LI+ + A +L + L ++M + P+ ++L++G K
Sbjct: 224 YSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCK 283
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNE 375
+ + D K L +++ D + P+ + Y++L++ CS N+ VN+
Sbjct: 284 EGKVNDAKVVLAIMMKDDI---KPDVVTYNSLMDGYCSINK----------------VNK 324
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
A D+M G + +Y ++ C+ V +A N++ EM
Sbjct: 325 AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY +IK C R+E + + KG + D +Y +I GFC+ K
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M+ G +P+A TY +I +L K A L +EM+
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 56/321 (17%)
Query: 137 LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
L P F+ L H E +F+ H ++HK +P F +N I+ L
Sbjct: 23 LFPSSIRLFSQLHHKQDEENNLISSFN--HLLLHKNP--------TPPTFQFNKILSSLV 72
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
AL + + M G+ D ++ I+I+ F Q GL+
Sbjct: 73 KAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQ-------------------LGLNS 113
Query: 257 VTYAYLMQGLSD-----EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
++++ + L T+ +LI C +G + + L D++ +G D V LI
Sbjct: 114 LSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLI 173
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
NGL K R T A LL D PN ++Y+ +I+N +
Sbjct: 174 NGLCKVGRI--TAALQLLKRVDGKLVQ-PNAVMYNMIIDNMCKAK--------------- 215
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLI--FDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
LVN+A + M+ PD YN LI F +LN A +++ +M + ++++
Sbjct: 216 LVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY--AIDLFNKMKKENINPNVYT 273
Query: 430 VLALLTALRDHGMYNERSWVI 450
L+ G N+ V+
Sbjct: 274 FNILVDGFCKEGKVNDAKVVL 294
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 187/452 (41%), Gaps = 73/452 (16%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCR--------FTAARNSESIQQDLATYNKIIKQHCLM 53
K+L+ + T TF +++ G+ + F ++ D +Y +I C +
Sbjct: 121 KILKKGYHPTAITFNTLIK-GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKV 179
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
R+ + +L+ + K + P+A+ Y +I C + A++ +M K I PD FTY
Sbjct: 180 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTY 239
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
++LI + +L+ A LF +M P+ TF L+ C EG+ + A + M+
Sbjct: 240 NALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
+ PD V TYN+++ G C + +V +A I M G+ + Y +++GF
Sbjct: 300 DDIKPDVV--------TYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351
Query: 231 CQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
C+ + + +A L EM RK++ + TY+SLI+ C G +F L
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNV---------------VTYSSLIDGLCKLGRIFYAL 396
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
L DEM +G P+ V S +++ L K A L + + M Y I
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI----- 451
Query: 350 ENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
L+K G + +A + +L Y D Y ++I C +
Sbjct: 452 -------------LIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK---- 494
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
GF LALL+ + D+G
Sbjct: 495 ------------GFFD---KALALLSKMEDNG 511
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 186/410 (45%), Gaps = 49/410 (11%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +IK CL + + + + +G D +SY +I G C A + +
Sbjct: 133 TFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 192
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
D K + P+A Y+ +I +C + +++A+ L+ +M++ PD T+ L+ +
Sbjct: 193 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKL 252
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+ A + ++M + + +P ++T+N ++ G C G+V +A +L M + + P
Sbjct: 253 NYAIDLFNKMKKENI--------NPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP 304
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
D V+Y ++ G+C ++ KA ++ D G+ +++ Y +++N
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDI---FDSMASGGV-----------IANVQIYTTMVNG 350
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT- 337
+C + + + L +EM + +P+ V S LI+GL K R L + D M+
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI-----FYALKLVDEMHDR 405
Query: 338 -SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
PN + Y ++++ C N+ + L+ + +G+ +PD Y
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI----------------RPDMYTY 449
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+LI C+ + A N++ +++ G+ +++ ++ D G +++
Sbjct: 450 TILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 70/343 (20%)
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------ 179
+S HL P F ++ + S A +H QM G+ DF T
Sbjct: 45 ISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILIN 104
Query: 180 ---------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
G+ P T+N +I GLC G + +AL + G
Sbjct: 105 CFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHL 164
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL------------ 266
D VSY +I+G C+ + A +L +D K+V + V Y ++ +
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP-NAVMYNMIIDNMCKAKLVNDAFDL 223
Query: 267 ----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
D TY +LI+ + A +L + L ++M + P+ ++L++G K
Sbjct: 224 YSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCK 283
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNE 375
+ + D K L +++ D + P+ + Y++L++ CS N+ VN+
Sbjct: 284 EGKVNDAKVVLAIMMKDDI---KPDVVTYNSLMDGYCSINK----------------VNK 324
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
A D+M G + +Y ++ C+ V +A N++ EM
Sbjct: 325 AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY +IK C R+E + + KG + D +Y +I GFC+ K
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
A +M+ G +P+A TY +I +L K A L +EM+
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 56/321 (17%)
Query: 137 LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
L P F+ L H E +F+ H ++HK +P F +N I+ L
Sbjct: 23 LFPSSIRLFSQLHHKQDEENNLISSFN--HLLLHKNP--------TPPTFQFNKILSSLV 72
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
AL + + M G+ D ++ I+I+ F Q GL+
Sbjct: 73 KAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQ-------------------LGLNS 113
Query: 257 VTYAYLMQGLSD-----EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
++++ + L T+ +LI C +G + + L D++ +G D V LI
Sbjct: 114 LSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLI 173
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
NGL K R T A LL D PN ++Y+ +I+N +
Sbjct: 174 NGLCKVGRI--TAALQLLKRVDGKLVQ-PNAVMYNMIIDNMCKAK--------------- 215
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLI--FDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
LVN+A + M+ PD YN LI F +LN A +++ +M + ++++
Sbjct: 216 LVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY--AIDLFNKMKKENINPNVYT 273
Query: 430 VLALLTALRDHGMYNERSWVI 450
L+ G N+ V+
Sbjct: 274 FNILVDGFCKEGKVNDAKVVL 294
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 179/402 (44%), Gaps = 31/402 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++AT+N ++ C + + +LR M E G P A++Y ++ +C A
Sbjct: 175 VSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAAS 234
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
E M KGI D TY+ LI LC K R ++ Y + + M + P++IT+ TL++
Sbjct: 235 ELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGL 294
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
EG+ A + +M +LP+ V TYN +I G C G +EEAL + M
Sbjct: 295 VKEGKIGVATKVFEEMSLCNLLPNSV--------TYNTLIFGHCSNGNIEEALRLCDVMV 346
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
GL P+ V+Y +++G ++ + + M +D V ++ +Y
Sbjct: 347 SHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMR------MDGVRVGHI--------SY 392
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
++I+ C G L + + L D+M PD V S+L+NG K +T +L
Sbjct: 393 TTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHSTL 452
Query: 333 DYMYTSMPNY--IIYDTLIENCS---NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
Y Y M N + + N S ++ F S V LV SF G + EA D M
Sbjct: 453 IYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSV-LVASFCRCGRLEEAEYFVDHMSRMG 511
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
P ++ +I + + KA++++ +M G + F+
Sbjct: 512 LAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFT 553
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
G A E M +G P FT + ++ +L R + + F+EM++ P+ TF L
Sbjct: 126 GDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNIL 185
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++A C G+F A + +M TG P TYN +++ C GR + A ++
Sbjct: 186 LNALCERGKFKSAGVLLRKMDE--------TGHFPTAVTYNTLLNWYCKKGRYKAASELI 237
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M G++ D +Y ++I C+ K Y + M + +V+ +E+TY L+ GL
Sbjct: 238 DAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYP-NEITYNTLINGLVK 296
Query: 269 ED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
E TY +LI +C+ G + + L L D M G P+ V
Sbjct: 297 EGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVT 356
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGL-- 363
L+NG+ K A+ + L + D + +I Y T+I+ C N + V L
Sbjct: 357 YGALLNGISKHAQFGLVSSVLERMRMDGVRVG---HISYTTMIDGLCKNGLLEEAVQLLD 413
Query: 364 ----------VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
+ +FS+ LVN +A T L P+ +++ LI+++C+ N+ +A N
Sbjct: 414 DMLKVSVSPDIVTFSV--LVNGFLKAGKTGL----VPNRVLHSTLIYNYCKMGNLKEALN 467
Query: 414 MYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
Y M + G VS F+ L+ + G E + + + R
Sbjct: 468 AYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSR 509
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 27/298 (9%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
A S+ I D+ TYN +I C R KG ILR M + + P+ ++Y +I G
Sbjct: 239 AMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEG 298
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFT 146
G A + EM +LP++ TY++LI CS + EA L M+S P+++T+
Sbjct: 299 KIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYG 358
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
L++ +F + +M GV + +Y +I GLC G +EEA+
Sbjct: 359 ALLNGISKHAQFGLVSSVLERMRMDGVRVGHI--------SYTTMIDGLCKNGLLEEAVQ 410
Query: 207 ILRGMPEMGLSPDAVSYIIVISGFCQ--------NRELRKAYELKVEMDRKVVWGLDEVT 258
+L M ++ +SPD V++ ++++GF + NR L + + + L E
Sbjct: 411 LLDDMLKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHST----LIYNYCKMGNLKEAL 466
Query: 259 YAYLMQG----LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
AY + +SD T + L+ ++C G L + D MS G P SV +I+
Sbjct: 467 NAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIID 524
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 191/486 (39%), Gaps = 77/486 (15%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN ++ + V +L M PD+ +Y +I G C A
Sbjct: 589 YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 648
Query: 103 QKGIL-PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
+KG+L P+ Y+SL+ L + A ++F++ML+ PD I F L+ +G+
Sbjct: 649 EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKM 708
Query: 159 SKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAI 191
SK + M + + + T GF+P T++++
Sbjct: 709 SKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSL 768
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR-KV 250
I G C G ++ A+ LR + G D + +++S C+ E++ A++L +++ V
Sbjct: 769 ILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGV 828
Query: 251 VWGLDEVTYAYLMQGLSD---------------EDTYA-------SLINAYCAQGELFKV 288
+D TY L G E+ YA +LI C G +
Sbjct: 829 TPNVD--TYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGA 886
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTL 348
+ L DEM G V S +I GL ++R D +L I+ + +P + TL
Sbjct: 887 MELQDEMKILGVSSQGVAMSAIIRGL-ARSRKTDEATRILGIMLEMQI--IPTVATFTTL 943
Query: 349 IENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
+ ++ G V +A M + + K D A YN+LI C ++
Sbjct: 944 MH---------------TYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDI 988
Query: 409 HKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELH--- 465
A+ +Y EM + + + L+ + G Y S + LR+ L +LH
Sbjct: 989 QAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGI 1048
Query: 466 KVLNEI 471
++LNE+
Sbjct: 1049 EILNEL 1054
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 151/348 (43%), Gaps = 32/348 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S S+ +LATYN ++ + + + + M G +PD L++ +I G+C +
Sbjct: 720 SRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLD 779
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTL 148
A +F ++ +G D FT + L+ LC + + A+ L +++ ++P D T+ +L
Sbjct: 780 VAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVD-TYNSL 838
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ F +A + H ++ G++P + +I G+C +G V+ A+ +
Sbjct: 839 FNGFVRTCSFDEARCILHALLEN--------GYAPTCKQFTTLIRGMCRMGNVKGAMELQ 890
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M +G+S V+ +I G ++R+ +A + + MQ +
Sbjct: 891 DEMKILGVSSQGVAMSAIIRGLARSRKTDEATRI--------------LGIMLEMQIIPT 936
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
T+ +L++ YC +G + K L L M D ++LI+GL D +A
Sbjct: 937 VATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADG---DIQAAFK 993
Query: 329 LIIADYMYTSMPNYIIYDTLIEN--CSNNEFKSVVGLVKSFSMRGLVN 374
L PN IY LI++ C+ N L++ R L++
Sbjct: 994 LYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMS 1041
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 184/470 (39%), Gaps = 88/470 (18%)
Query: 29 AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN 88
A N D T + ++ C R+E+ + M+ GL+P ++++ +I + N+
Sbjct: 470 AVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNS 529
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTY-----------------------SSLIQALCS--- 122
KA+ +M+ G LP FTY SS+ A+ S
Sbjct: 530 GDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFY 589
Query: 123 ---------KRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
LS A L EM+ PD T+T+L+ C +G+ A + + I
Sbjct: 590 NTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIE 649
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
KG+L SP Y +++ GL G + AL + M G+ PDA+++ +++ +
Sbjct: 650 KGLL-------SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRY 702
Query: 231 CQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLS---------------------- 267
+ ++ K ++ M R + + L TY L+ G S
Sbjct: 703 SRKGKMSKVNDILSTMRSRSLCFNL--ATYNILLHGYSKRHGMARCSKLYNEMIIHGFAP 760
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
D T+ SLI YC G L + +++ +G D ++L++ L ++ + K
Sbjct: 761 DRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCER---NEIKMAF 817
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
L+ M PN Y++L G V++ S +EA +LE
Sbjct: 818 DLVKQLNMLGVTPNVDTYNSLFN-----------GFVRTCSF----DEARCILHALLENG 862
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
Y P + LI CR NV A + EM G S ++ A++ L
Sbjct: 863 YAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGL 912
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 167/414 (40%), Gaps = 78/414 (18%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-------------- 87
+Y +I C +E+ V +L M + +SPD +++ ++ GF
Sbjct: 391 SYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHS 450
Query: 88 ----NRCP----GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
N C +A M+Q G + D FT S L+ + C RL EA + M
Sbjct: 451 TLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRM 510
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P +TF ++ G+ KAF + +M G L P+ FTY ++ GL
Sbjct: 511 GLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHL--------PSQFTYEGLLKGLL 562
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
G + EA + + + + Y +++ ++ L A L LDE
Sbjct: 563 IGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVAL-----------LDE 611
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL-PDSVIDSLLINGLD 315
+ + + D TY SLI C +G++ L L KG L P+ + + L++GL
Sbjct: 612 MV---MNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLL 668
Query: 316 KKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
K+ +K A YM+ M P+ I ++ L++ +S
Sbjct: 669 KEGHSK---------AALYMFEDMLNEGVQPDAIAFNVLLDR---------------YSR 704
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+G +++ TM + + A YN+L+ + +R + + +Y EM+ +GF
Sbjct: 705 KGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGF 758
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 30/285 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ DL N + C + + +L + + G PD ++ +I G C +A
Sbjct: 6 IKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQAL 65
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F ++ G + D F+Y +LI LC A L + + L PD + + ++ +
Sbjct: 66 HFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIIDSM 125
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT-----------GFSPALFTYNAIIHGLCFLGRV 201
C + + AF ++ +M+ K + PD +T GF P TYN+++ G C L V
Sbjct: 126 CKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCIVGFKPNFVTYNSLMDGYCLLKEV 185
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYA 260
+A I M + G++P SY I+I+GFC+ +++ +A L EM RK++
Sbjct: 186 NKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLI--------- 236
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D TY SLI+ C G++ L L DEM +G PD +
Sbjct: 237 ------PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDII 275
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + TYN ++ +CL++ V K I MA++G++P SY +I GFC + +A
Sbjct: 166 KPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAIN 225
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDIT 144
EM + ++PD TY+SLI LC ++S A L EM PPD IT
Sbjct: 226 LFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 276
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 49/235 (20%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T N +IK CL + + + + G D SY +I C A E
Sbjct: 42 EPDTITLNTLIKGLCLKGDIHQALHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALE 101
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP----------------- 139
+D K + PD Y ++I ++C + ++ A+ L+ +M+S
Sbjct: 102 LLRRVDGKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFC 161
Query: 140 -----PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD------FVTGFS------ 182
P+ +T+ +LM CL E +KA + + M +GV P + GF
Sbjct: 162 IVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVD 221
Query: 183 ---------------PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
P + TYN++I GLC G++ AL ++ M + G PD ++
Sbjct: 222 EAINLFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 276
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 45/255 (17%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P L N + + C LG + + +L + +MG PD ++ +I G C ++ +A
Sbjct: 5 GIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQA 64
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
D+ V G + D+ +Y +LIN C GE L L + K
Sbjct: 65 LHFH---DKLVAIGF-----------MLDQFSYGTLINDLCKAGETKAALELLRRVDGKL 110
Query: 300 SLPD-----SVIDSLLIN-------GLDKKARTKDTKAHLLL---IIADYMYTSM-PNYI 343
PD ++IDS+ + L K +K +L +I+D+ PN++
Sbjct: 111 VQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCIVGFKPNFV 170
Query: 344 IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
Y++L++ + + VN+A +TM + P YN+LI C
Sbjct: 171 TYNSLMD---------------GYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFC 215
Query: 404 RRLNVHKAYNMYMEM 418
+ V +A N++ EM
Sbjct: 216 KIKKVDEAINLFEEM 230
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 201/432 (46%), Gaps = 66/432 (15%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +IK CL + + + + +G D +SY +I G C A + +
Sbjct: 142 TFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 201
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
D K + P+A Y+ +I +C + +++A+ L+ +M++ PDD T +L++ C+ G+
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A + H+MI + + +P ++T++ ++ C G+V+EA +L + +
Sbjct: 262 KEAVGLLHKMILENI--------NPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIIL 313
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINA 278
D V+Y ++ G+C +E+ KA ++ M + V +++ +Y ++IN
Sbjct: 314 DVVTYNSLMDGYCLVKEINKAKDIFDSMASRGV--------------IANVQSYTTMING 359
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT- 337
C + + + L +EM + +P+ V + LI+GL K K +L + D M+
Sbjct: 360 LCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLG-----KISCVLKLVDEMHDR 414
Query: 338 -SMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
PN I Y+++++ C N+ + L+ + +G+ +PD Y
Sbjct: 415 GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI----------------RPDMYTY 458
Query: 396 NLLIFDHCRRLNVH-----------KAYNM----YMEMVRYGFVSHMF-SVLALLTALRD 439
+LI C+ + K YN+ Y M++ V +F + LALL+ + D
Sbjct: 459 TVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMED 518
Query: 440 HG-MYNERSWVI 450
+G + N +++ I
Sbjct: 519 NGCIPNAKTYEI 530
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 193/457 (42%), Gaps = 63/457 (13%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCR--------FTAARNSESIQQDLATYNKIIKQHCLM 53
K+L+ F TF +++ G+ + F ++ D +Y +I C +
Sbjct: 130 KILKKGFDPNAITFNTLIK-GLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKV 188
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
R+ + +L+ + K + P+A+ Y +I C + A++ +M K I PD FT
Sbjct: 189 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTC 248
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
+SLI C +L EA L +M+ P TF+ L+ A C EG+ +A M +
Sbjct: 249 NSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMK 308
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
K ++ D V TYN+++ G C + + +A I M G+ + SY +I+G
Sbjct: 309 KDIILDVV--------TYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360
Query: 231 CQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGLS------------DE-------- 269
C+ + + +A L EM RK++ + VTY L+ GL DE
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNV--VTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPP 418
Query: 270 --DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
TY S+++A C + K + L + +G PD ++LI GL + + +D +
Sbjct: 419 NIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK-- 476
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+++ L+ N + + +++ F ++GL + A M +
Sbjct: 477 ----------------VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNG 520
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
P+ Y ++I + A + EM+ G +
Sbjct: 521 CIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 43/353 (12%)
Query: 69 KGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSE 128
K +P + + +++ + A +M+ GI+ D FT++ LI S
Sbjct: 64 KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123
Query: 129 AYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
++ +F ++L P+ ITF TL+ CL+G +A + H +++ +G D V
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV------- 176
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+Y +I+GLC +GR+ AL +L+ + + P+AV Y ++I C+ + + A++L +
Sbjct: 177 -SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
M K + D+ T SLI +C G+L + + L +M + P
Sbjct: 236 MVAKRIS--------------PDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
S+L++ K+ + K+ K L +M II D + N L+
Sbjct: 282 TFSILVDAFCKEGKVKEAKMML--------GVTMKKDIILDVVTYN----------SLMD 323
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ + +N+A D+M + Y +I C+ V +A N++ EM
Sbjct: 324 GYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEM 376
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 126/353 (35%), Gaps = 77/353 (21%)
Query: 105 GILPDAFT-YSSLIQALCSKRRLSEAYHLFQEMLSP-PDDITFTTLMHACCLEGEFSKAF 162
G+ P + + YS L + L +++ +P P I F ++ + S A
Sbjct: 31 GLFPSSISLYSQLHHHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTAL 90
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
+H QM G++ DF FT+N +I+ LG + + + + G P+A+
Sbjct: 91 SLHQQMELNGIVSDF--------FTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAI- 141
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
T+ +LI C +
Sbjct: 142 ------------------------------------------------TFNTLIKGLCLK 153
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
G + + L D++ +G D V LINGL K R T A LL D PN
Sbjct: 154 GHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRI--TAALQLLKRVDGKLVQ-PNA 210
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
++Y+ +I+N + LVN+A + M+ PD N LI+
Sbjct: 211 VMYNMIIDNMCKAK---------------LVNDAFDLYSQMVAKRISPDDFTCNSLIYGF 255
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
C + +A + +M+ M++ L+ A G E ++ T++
Sbjct: 256 CIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMK 308
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 16/222 (7%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILR-----GMAEKGLSPDALSYRYVITGFCN 87
++ I ++ TYN +I C++ ++ G+L+ MA KG++PD SY +I GFC
Sbjct: 48 TKRISPNIVTYNTLIHGFCIVGQLNDAFGLLQLFIFGIMARKGVTPDTDSYIIMINGFCK 107
Query: 88 NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDIT 144
+ +A EM K I P+ TY+SLI LC R+S A L EM PP+ IT
Sbjct: 108 IKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNIIT 167
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+ +++ C + KA ++ + + P+++TYN +I+GLC +GR+++A
Sbjct: 168 YNSILDVLCKNYDVDKAIVFLTKLKDQDI--------QPSMYTYNILIYGLCKVGRLKDA 219
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
+ + G S DA +Y I+I GFC +A+ L +M
Sbjct: 220 RKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLFGEAFTLLSKM 261
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 37/269 (13%)
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
P + Y+ II G+C V + + + M +SP+ V+Y +I GFC +L A+
Sbjct: 17 QPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAFG 76
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
L + ++G+ +G++ D D+Y +IN +C + + + L +EM K
Sbjct: 77 LL----QLFIFGI------MARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQI 126
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIEN-CSNNEF 357
P+ V + LINGL + R L + D M+ PN I Y+++++ C N +
Sbjct: 127 FPNVVTYNSLINGLCRSGRIS-----YALELVDEMHDRGQPPNIITYNSILDVLCKNYDV 181
Query: 358 -KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
K++V L K + + + +P YN+LI+ C+ + A ++
Sbjct: 182 DKAIVFLTK-----------------LKDQDIQPSMYTYNILIYGLCKVGRLKDARKVFE 224
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNE 445
++ G ++ ++ G++ E
Sbjct: 225 YLLVKGCSLDAYTYTIMIHGFCSKGLFGE 253
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 188/441 (42%), Gaps = 72/441 (16%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + D+ T+N I+ C R+E ++R M + G P+ ++Y +I G+ K
Sbjct: 159 KGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEK 218
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML------SPPDDITFTT 147
A + M GI P+ T + +++ALC K L +A ++ ++L + PD + TT
Sbjct: 219 ADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTT 278
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------G 180
LM G+ ++A + ++MI K D V G
Sbjct: 279 LMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKG 338
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P +FTYN +IH LC G++ EA + M +M + PD +SY ++I G C N ++ +A
Sbjct: 339 LIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAK 398
Query: 241 ELKVEM------DRKVVWGL--------DEVTYAYLMQG-------LSDEDTYASLINAY 279
+L + M + ++W L +++ A+L + L + TY +LI A
Sbjct: 399 DLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQ 458
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
G + +L +EM K PD V +LLI G + I D
Sbjct: 459 LKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGG--------------AINIGDLDLA-- 502
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
+ + D +++ + + ++ + + G + EA + +L+ D +L
Sbjct: 503 --HQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILF 560
Query: 400 FDHCRRLNVHKAYNMYMEMVR 420
+C+ +A+N Y + ++
Sbjct: 561 NKYCKLGEPIRAFNFYQDWLK 581
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 166/371 (44%), Gaps = 40/371 (10%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
CL ++ + M EKG+ PD ++ +++ G C N A +M + G P+
Sbjct: 141 CLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNC 200
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQ 167
TY++LI+ + +A LF+ M + P+ +T ++ A C +G KA +M +
Sbjct: 201 ITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDK 260
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+L D +P L ++ G+ +ALG+ M + D V+Y ++I
Sbjct: 261 -----ILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLI 315
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
+G C+N+++ AY EM +K GL + D TY LI+A C +G++ +
Sbjct: 316 NGVCRNQQMHLAYGYACEMLKK---GL-----------IPDVFTYNILIHALCKEGKISE 361
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
L MS +PD + ++I+GL K LL ++ ++M +P II++
Sbjct: 362 ACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFM---VPQAIIWNL 418
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
+I++ + L +F R D ML P+ YN LI + N
Sbjct: 419 IIDS-----YGRCEDLRNAFLTR----------DQMLASGVLPNVFTYNALILAQLKSGN 463
Query: 408 VHKAYNMYMEM 418
+H A+++ EM
Sbjct: 464 IHNAHSLKEEM 474
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 72/297 (24%)
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CLEG+ + A+ + +M+ KGVLPD ++T+N I++GLC GR+E A ++R M
Sbjct: 141 CLEGKLAAAWWLRIKMMEKGVLPD--------VYTHNHIVNGLCENGRMENADFLVRQML 192
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ G P+ ++Y +I G+ Y + D
Sbjct: 193 KSGPHPNCITYNTLIKGY------------------------------YAVHNTEKAD-- 220
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LF+ MS+ G P+ V ++++ L +K + + L I+
Sbjct: 221 -----------DLFRT------MSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILN 263
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
D + P+ + TL++N N KS GL NE M++ K D
Sbjct: 264 DDNGEATPDLVASTTLMDNYFKNG--------KSNQALGLWNE-------MIQKCTKVDV 308
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWV 449
YN+LI CR +H AY EM++ G + +F+ L+ AL G +E ++
Sbjct: 309 VAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYL 365
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 40/349 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ Q + +Y +I C + +LR + + P+ + Y +I C ++
Sbjct: 22 AKEFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVI 81
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
A++ EM I P+ TY++LI C ++ +A L EML P+ +TF TL+
Sbjct: 82 DAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLV 141
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C EGE KA + MI +GV + V TY+ ++ G + V +A +
Sbjct: 142 DGLCKEGEMKKARKVLAFMIKQGVELNVV--------TYSFLMDGYFLVKEVNKATFVFN 193
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--- 266
M G++ + SY ++I+G C+N+ + +A L EM K + D VTY L+ GL
Sbjct: 194 TMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNM-APDIVTYNSLIDGLLKY 252
Query: 267 -------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
+D TY SL++A C ++ +TL ++ +G P
Sbjct: 253 GRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTY 312
Query: 308 SLLINGLDKKARTKDTK-AHLLLIIADY-----MYTSMPNYIIYDTLIE 350
++L++GL K R KD + + +L+I Y MYT M N + ++L +
Sbjct: 313 TILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLCKESLFD 361
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ ++ ++ TY+ ++ + L++ V K + M +G++ + SY +I G C N+
Sbjct: 162 KQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVD 221
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A EM K + PD TY+SLI L R+S+A+ L EM + P D IT+ +L+
Sbjct: 222 EAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLL 281
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C + A + ++ +G+ P ++TY ++ GLC GR+++A + +
Sbjct: 282 DALCKNHQVDMAITLFTKIKDQGI--------QPYIYTYTILVDGLCKNGRLKDAQEVYQ 333
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ G D Y ++I+G C+ KA L +M + VT+ L++ L +
Sbjct: 334 ILLIKGYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNGCTP-NPVTFEILIRALFEN 392
Query: 270 D 270
D
Sbjct: 393 D 393
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 62/315 (19%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA---- 94
++ TYN +I C++ ++++ + +L M K +SP+ +++ ++ G C KA
Sbjct: 98 NVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVL 157
Query: 95 --------------YEFKLE-----------------MDQKGILPDAFTYSSLIQALCSK 123
Y F ++ M ++G+ + +Y+ +I LC
Sbjct: 158 AFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKN 217
Query: 124 RRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+ + EA +LF+EM PD +T+ +L+ G S A+ + ++M ++G D +
Sbjct: 218 KMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVI-- 275
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
TYN+++ LC +V+ A+ + + + G+ P +Y I++ G C+N L+ A
Sbjct: 276 ------TYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDA- 328
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
EV L++G D Y +IN C + K L+L +M G
Sbjct: 329 --------------QEVYQILLIKGYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNG 374
Query: 300 SLPDSVIDSLLINGL 314
P+ V +LI L
Sbjct: 375 CTPNPVTFEILIRAL 389
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 51/313 (16%)
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
M CL G+ +A + H +I K F +Y +I GLC G A+ +L
Sbjct: 1 MKGLCLNGKVKEALYFHDDVIAKE--------FQLNQVSYGTLIDGLCKAGETRAAMQVL 52
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
R + + + P+ V Y +I C+++ + A++L EM M+ +
Sbjct: 53 RNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEM--------------VAMRIFPN 98
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
TY +LI +C G++ + + L +EM K P+ V + L++GL K+ K + L
Sbjct: 99 VVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLA 158
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL-----VNEAARAHDTM 383
+I + ++ Y SF M G VN+A +TM
Sbjct: 159 FMIKQGVELNVVTY-----------------------SFLMDGYFLVKEVNKATFVFNTM 195
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMY 443
+ + Y ++I C+ V +A N++ EM + + +L+ L +G
Sbjct: 196 VRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRI 255
Query: 444 NERSWVIQNTLRS 456
++ +W + N + +
Sbjct: 256 SD-AWDLVNEMHN 267
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 186/436 (42%), Gaps = 72/436 (16%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ T+N I+ C R+E ++R M + G P+ ++Y +I G+ KA +
Sbjct: 145 DVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLF 204
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML------SPPDDITFTTLMHAC 152
M GI P+ T + +++ALC K L +A ++ ++L + PD + TTLM
Sbjct: 205 RTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNY 264
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPAL 185
G+ ++A + ++MI K D V G P +
Sbjct: 265 FKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDV 324
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
FTYN +IH LC G++ EA + M +M + PD +SY ++I G C N ++ +A +L +
Sbjct: 325 FTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLC 384
Query: 246 M------DRKVVWGL--------DEVTYAYLMQG-------LSDEDTYASLINAYCAQGE 284
M + ++W L +++ A+L + L + TY +LI A G
Sbjct: 385 MLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGN 444
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYII 344
+ +L +EM K PD V +LLI G + I D + +
Sbjct: 445 IHNAHSLKEEMRTKNLRPDVVTYNLLIGG--------------AINIGDLDLA----HQL 486
Query: 345 YDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
D +++ + + ++ + + G + EA + +L+ D +L +C+
Sbjct: 487 CDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILFNKYCK 546
Query: 405 RLNVHKAYNMYMEMVR 420
+A+N Y + ++
Sbjct: 547 LGEPIRAFNFYQDWLK 562
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 166/371 (44%), Gaps = 40/371 (10%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
CL ++ + M EKG+ PD ++ +++ G C N A +M + G P+
Sbjct: 122 CLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNC 181
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQ 167
TY++LI+ + +A LF+ M + P+ +T ++ A C +G KA +M +
Sbjct: 182 ITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDK 241
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+L D +P L ++ G+ +ALG+ M + D V+Y ++I
Sbjct: 242 -----ILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLI 296
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
+G C+N+++ AY EM +K GL + D TY LI+A C +G++ +
Sbjct: 297 NGVCRNQQMHLAYGYACEMLKK---GL-----------IPDVFTYNILIHALCKEGKISE 342
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
L MS +PD + ++I+GL K LL ++ ++M +P II++
Sbjct: 343 ACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFM---VPQAIIWNL 399
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
+I++ E L +F R D ML P+ YN LI + N
Sbjct: 400 IIDSYGRCE-----DLRNAFLTR----------DQMLASGVLPNVFTYNALILAQLKSGN 444
Query: 408 VHKAYNMYMEM 418
+H A+++ EM
Sbjct: 445 IHNAHSLKEEM 455
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 72/293 (24%)
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
CLEG+ + A+ + +M+ KGVLPD ++T+N I++GLC GR+E A ++R M
Sbjct: 122 CLEGKLAAAWWLRIKMMEKGVLPD--------VYTHNHIVNGLCENGRMENADFLVRQML 173
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ G P+ ++Y +I G+ Y + D
Sbjct: 174 KSGPHPNCITYNTLIKGY------------------------------YAVHNTEKAD-- 201
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LF+ MS+ G P+ V ++++ L +K + + L I+
Sbjct: 202 -----------DLFRT------MSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILN 244
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
D + P+ + TL++N N KS GL NE M++ K D
Sbjct: 245 DDNGEATPDLVASTTLMDNYFKNG--------KSNQALGLWNE-------MIQKCTKVDV 289
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
YN+LI CR +H AY EM++ G + +F+ L+ AL G +E
Sbjct: 290 VAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISE 342
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 46/252 (18%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN---------- 88
D+ TYN +I C ++ + + M++ + PD +SY+ +I G C N
Sbjct: 323 DVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLL 382
Query: 89 -----------------------RCPG--KAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
RC A+ + +M G+LP+ FTY++LI A
Sbjct: 383 LCMLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKS 442
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+ A+ L +EM + PD +T+ L+ G+ A + +M+ +G PD
Sbjct: 443 GNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGREPD---- 498
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
L T I G C +G +EEA + + GL D V I+ + +C+ E +A+
Sbjct: 499 ----LITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILFNKYCKLGEPIRAF 554
Query: 241 ELKVEMDRKVVW 252
+ + + W
Sbjct: 555 NFYQDWLKNITW 566
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 43/369 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + +ATY+ +I+ + +E+ I M EK + D Y +I+ +
Sbjct: 281 EQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKR 340
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD---ITFTTLMH 150
A+ EM Q+ I+P+A TY +LI +C ++ A L EM S D + F T M
Sbjct: 341 AFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMD 400
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G+ +A + M KG+ D +FTYN + +GLC L R +EA IL
Sbjct: 401 GYCRRGKMDEALRLQAIMEKKGINAD--------VFTYNILANGLCKLHRYDEAKCILNS 452
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M E G+ P+ V++ + I +C+ L +A L +M++K EV
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKK-----GEVPNII--------- 498
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +LI+AYC + ++ + + EM +KG LPD S LI+G R +
Sbjct: 499 TYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEA------- 551
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+ N + + N + + ++ S G +EA + +D M++ P
Sbjct: 552 ------LKLFNEMRLKGITRNVA-----TYTSMISGLSKEGRADEAFKLYDEMMKIGLIP 600
Query: 391 DGAVYNLLI 399
D V+ L+
Sbjct: 601 DDRVFTSLV 609
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 128/247 (51%), Gaps = 12/247 (4%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
S+ + +L +N + +C ++++ + + M +KG++ D +Y + G C
Sbjct: 384 QSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRY 443
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A M +KG+ P+ T++ I+ C + L+EA LF++M P+ IT+ TL
Sbjct: 444 DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTL 503
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ A C + + +A + +MI+KG+LPD L+TY+++IHG C +GRV+EAL +
Sbjct: 504 IDAYCKKEKVKQAHKIKSEMINKGLLPD--------LYTYSSLIHGECIVGRVDEALKLF 555
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
M G++ + +Y +ISG + +A++L EM K+ D+ + L+
Sbjct: 556 NEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM-MKIGLIPDDRVFTSLVGSFHK 614
Query: 269 EDTYASL 275
T+A L
Sbjct: 615 PLTHAGL 621
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 26 RFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGF 85
R A + I D+ TYN + C + R ++ IL M EKG+ P+ +++ I +
Sbjct: 413 RLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIY 472
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C +A +M++KG +P+ TY++LI A C K ++ +A+ + EM++ PD
Sbjct: 473 CKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDL 532
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T+++L+H C+ G +A + ++M KG+ + TY ++I GL GR +
Sbjct: 533 YTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVA--------TYTSMISGLSKEGRAD 584
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGF 230
EA + M ++GL PD + ++ F
Sbjct: 585 EAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 57/407 (14%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGL-SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQK 104
+I C VEK ++ M KG+ P+ +Y ++ + + E M+++
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKA 161
++ TYS LIQ S + EA +F+EM D +++++ G +A
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRA 341
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
F + +M + ++P+ TY A+I G+C G++E A +L M G+ + V
Sbjct: 342 FALFDEMSQRDIVPN--------AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLV 393
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-----DED------ 270
+ + G+C+ ++ +A L+ M++K + D TY L GL DE
Sbjct: 394 IFNTTMDGYCRRGKMDEALRLQAIMEKKGI-NADVFTYNILANGLCKLHRYDEAKCILNS 452
Query: 271 -----------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
T+ I YC +G L + L +M KG +P+ + + LI+ KK +
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEK 512
Query: 320 TKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAA 377
K +AH I M +P+ Y +LI + +V G V+EA
Sbjct: 513 VK--QAHK---IKSEMINKGLLPDLYTYSSLIHG------ECIV---------GRVDEAL 552
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ + M + A Y +I + +A+ +Y EM++ G +
Sbjct: 553 KLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLI 599
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 44/362 (12%)
Query: 77 SYRYVITGFCNNRCPGKAYEFKLEMDQKGIL-PDAFTYSSLIQALCSKRR---LSEAYHL 132
S VI C KA E EM KGI+ P+ FTY++L+ A ++ + E L
Sbjct: 218 SLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKL 277
Query: 133 FQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
++ T++ L+ G+ +A + +M K + D ++ Y+++I
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMD--------VYVYSSMI 329
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
LG ++ A + M + + P+A +Y +I G C+ ++ A L +EM K V
Sbjct: 330 SWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV- 388
Query: 253 GLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
L+ V + M G YC +G++ + L L M KG D ++L N
Sbjct: 389 DLNLVIFNTTMDG-------------YCRRGKMDEALRLQAIMEKKGINADVFTYNILAN 435
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
GL K R + K L ++ + PN + + IE + G
Sbjct: 436 GLCKLHRYDEAKCILNSMVEKGV---KPNVVTFTMFIE---------------IYCKEGN 477
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLA 432
+ EA R M + P+ YN LI +C++ V +A+ + EM+ G + +++ +
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537
Query: 433 LL 434
L+
Sbjct: 538 LI 539
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 50/401 (12%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
C + K V ++ M G+ PDA SY +++ C G A + +M+ G +
Sbjct: 114 CRSGKARKAVRVMEIMVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNT 173
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQ 167
TY++L++ LC +L+++ + ++ P+ +T++ L+ A E +A +
Sbjct: 174 VTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDD 233
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+I KG P+ V +YN ++ GLC GR E+A+ + + +PE G P VS+ I++
Sbjct: 234 IIAKGGKPNLV--------SYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILL 285
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
C +AYEL MDR VTY L+ LS I+ Q FK
Sbjct: 286 RSLCYEGRWDEAYELMAGMDRD-GQAPSVVTYNVLITSLS--------IDGRIEQA--FK 334
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
VL DEM+ G + + +I L K+ R L++ D M
Sbjct: 335 VL---DEMTKSGFKVSANSYNPIIARLCKEGR-----VDLVVQCLDQMI----------- 375
Query: 348 LIENCSNNEFKSVVGLVKSFSM---RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
N F G + ++ RG+V EA + + + P Y +I CR
Sbjct: 376 ------NRRFHLNGGTYNAIALLCERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCR 429
Query: 405 RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+ N + A+ + EM +GF ++ +L+ + GM +E
Sbjct: 430 KGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDE 470
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 30/345 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ +L +YN ++ C R E + + + + EKG P +S+ ++ C +AYE
Sbjct: 240 KPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYE 299
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACC 153
MD+ G P TY+ LI +L R+ +A+ + EM + ++ ++ C
Sbjct: 300 LMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLC 359
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG QMI++ F TYNAI LC G V+EA IL + +
Sbjct: 360 KEGRVDLVVQCLDQMINR--------RFHLNGGTYNAIAL-LCERGMVKEAFLILERLGK 410
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
P + Y VI+ C+ A+++ EM V G +Y TY+
Sbjct: 411 KQNYPISDFYKNVITLLCRKGNTYPAFQILYEM---TVHGFTPDSY-----------TYS 456
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
SLI C +G L + L + + G +P + LI GL K R D + ++ +
Sbjct: 457 SLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRI-DMSIEIFQMMVN 515
Query: 334 YMYTSMPNYIIYDTLIENCS-NNEFKSVVGLVKSFSMRGLVNEAA 377
MPN + Y+ L+E + E + L+ ++G+++++
Sbjct: 516 --KGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQST 558
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
E + AF Q++ KG P+ +++ LC G+ +A+ ++ M
Sbjct: 81 EMRLNDAFLQLEQIVGKGNKPEVTQA--------TQLLYDLCRSGKARKAVRVMEIMVSS 132
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G+ PDA SY +++ C+ + A +L +M+ + + VTY L++GL
Sbjct: 133 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEAN-GFPTNTVTYNTLVKGL-------- 183
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
C G+L + + + D + KG +P+ V S+LI K+ + L IIA
Sbjct: 184 -----CMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAK- 237
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
PN + Y+ L+ GL K G +A + + E +KP
Sbjct: 238 --GGKPNLVSYNVLL-----------TGLCK----EGRTEDAIKLFKELPEKGFKPCVVS 280
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
+N+L+ C +AY + M R G + + L+T+L G + V+
Sbjct: 281 HNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMT 340
Query: 455 RS 456
+S
Sbjct: 341 KS 342
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 196/441 (44%), Gaps = 49/441 (11%)
Query: 19 VRNGVVCR----FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
+R+ CR F +N + D+ ++ +IK C + K +L M + GLSP+
Sbjct: 141 IRSNSFCRAWLVFDELKNK--VVLDVYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPN 198
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+ Y +I G C N A + +M ++ + TYS LI + E + +++
Sbjct: 199 VVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYE 258
Query: 135 EM-LSP--PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
M LS P+ T+++++ C +G KAF++ +M K + + ++ TYN +
Sbjct: 259 SMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDI--------ACSIMTYNLL 310
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I+GLC + ++ EA+ + + +GL P+ +Y +I G+C ++ A L E+
Sbjct: 311 INGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSN-- 368
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
GL TY +LI Y G L L L EM + P V ++L+
Sbjct: 369 -GLSPTVV-----------TYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILL 416
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
NG + +YM + + I+ + ++ ++ + L+ M G
Sbjct: 417 NGF---------------VRINYMEKA---FEIHSLMEKSGLVSDVYTYGVLIHGLCMNG 458
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
+ EA++ ++ E N +P+ +Y+ LI +C+ N ++A + EM+ G V ++ S
Sbjct: 459 SMKEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCYRALRLLNEMIGKGMVPNVASFC 518
Query: 432 ALLTALRDHGMYNERSWVIQN 452
+ + L E V+Q+
Sbjct: 519 STIGLLCKDEKLKEAEVVLQH 539
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + + TYN +I + + + + +++ M E+ ++P ++Y ++ GF
Sbjct: 367 SNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYME 426
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ---EMLSPPDDITFTTLM 149
KA+E M++ G++ D +TY LI LC + EA LF+ E+ P+ + + TL+
Sbjct: 427 KAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLI 486
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H C EG +A + ++MI KG++P+ ++ + I LC +++EA +L+
Sbjct: 487 HGYCKEGNCYRALRLLNEMIGKGMVPNVA--------SFCSTIGLLCKDEKLKEAEVVLQ 538
Query: 210 GMPEMGLSPDAVSYIIV 226
M +GL P Y +V
Sbjct: 539 HMVNLGLKPSVSLYNMV 555
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 168/403 (41%), Gaps = 47/403 (11%)
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
S +L Y ++ + +++ P +A F EM KG P + T+++L+ L A+
Sbjct: 92 STCSLLYEAIVNAYVHSQSPDEALYFLHEMIHKGHAPISNTFNNLLNLLIRSNSFCRAWL 151
Query: 132 LFQEMLSPP--DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
+F E+ + D +F ++ CC G+ K+F + M TG SP + Y
Sbjct: 152 VFDELKNKVVLDVYSFGIMIKGCCEAGDLMKSFQLLGMMEK--------TGLSPNVVIYT 203
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I G C G V A + M + L + +Y ++I+GF + ++ +++ M
Sbjct: 204 TLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMK-- 261
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
+ G+ Y TY+S+I YC G + K + DEM K + +L
Sbjct: 262 -LSGIVPNVY-----------TYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNL 309
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN-----------NEFK 358
LINGL R K + L PN Y+TLI+ + NE K
Sbjct: 310 LINGL---CRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELK 366
Query: 359 S------VV---GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
S VV L+ +S G + A M E N P Y +L+ R +
Sbjct: 367 SNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYME 426
Query: 410 KAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN 452
KA+ ++ M + G VS +++ L+ L +G E S + ++
Sbjct: 427 KAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKS 469
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 137/328 (41%), Gaps = 51/328 (15%)
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH 150
P KA+ F + +G+ + + S ++ L S S+A + ++S
Sbjct: 19 PEKAFSFFIPSTCQGLQHTSQSVSFILNRLLSSGLQSQAQSVLVRVIS------------ 66
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G+ + + H ++ + F + + +L Y AI++ +EAL L
Sbjct: 67 -----GQVTSSMFSHSSLMEELTQTHFTSSSTCSLL-YEAIVNAYVHSQSPDEALYFLHE 120
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M G +P + ++ +++ ++ +A+ + E+ KVV LD ++ +++G
Sbjct: 121 MIHKGHAPISNTFNNLLNLLIRSNSFCRAWLVFDELKNKVV--LDVYSFGIMIKGC---- 174
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
C G+L K L M G P+ VI + LI+G K+ HL
Sbjct: 175 ---------CEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGC-----CKNGDVHL--- 217
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A ++ M ++ +N SV L+ F +GL E + +++M P
Sbjct: 218 -AKKLFCKMKG-------LDLVANQHTYSV--LINGFFKQGLQKEGFQMYESMKLSGIVP 267
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ Y+ +I ++C ++ KA+N++ EM
Sbjct: 268 NVYTYSSVIGEYCNDGSIDKAFNVFDEM 295
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 139/278 (50%), Gaps = 27/278 (9%)
Query: 7 SFTATLKTFRHMV----RNGVVCRFTAARN------SESIQQDLATYNKIIKQHCLMQRV 56
+ T ++TF +V ++G V + ARN + ++ ++ TYN ++ + L++ V
Sbjct: 118 TVTPNIRTFTTLVDGLCKDGEVKK---ARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEV 174
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
K + ++ +G++P+ SY+ +I G C N+ +A EM K ++PD Y+SL
Sbjct: 175 NKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSL 234
Query: 117 IQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
I LC RR+ + + EM P + IT+ +L+ C + KA + ++ ++G+
Sbjct: 235 IDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGI 294
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
P+ ++TY ++ GLC GR+ +A + + + G DA Y ++I+G C+
Sbjct: 295 RPN--------IYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKE 346
Query: 234 RELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSDED 270
L +A L +M D K D VTY ++ L + D
Sbjct: 347 GFLDEALSLLSKMEDNKCTP--DGVTYEITIRALFESD 382
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 157/368 (42%), Gaps = 66/368 (17%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS----KRR- 125
+ PD + Y +I C ++ + EM K I PD TY++LI +L + K R
Sbjct: 35 VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRK 94
Query: 126 ---------LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
+ EA L +M S P+ TFTTL+ C +GE KA ++ MI + V
Sbjct: 95 EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
P+ V TYN+++ G + V +A + + G++P+ SY ++I+G C+N
Sbjct: 155 EPNIV--------TYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKN 206
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDT 271
+ + +A L EM K + D V Y L+ GL ++ T
Sbjct: 207 KMVDEAANLFKEMHSKNMVP-DTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIIT 265
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y SL++ C ++ K +TL ++ ++G P+ ++L++GL K R +D +
Sbjct: 266 YNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQE------ 319
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
+Y L+ + + ++ G ++EA M + PD
Sbjct: 320 ------------VYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPD 367
Query: 392 GAVYNLLI 399
G Y + I
Sbjct: 368 GVTYEITI 375
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+++ ++ T+ ++ C V+K +L M ++ + P+ ++Y ++ G+ +
Sbjct: 116 SKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVN 175
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
KA + + +G+ P+ +Y +I LC + + EA +LF+EM S PD + + +L+
Sbjct: 176 KAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLI 235
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA-LFTYNAIIHGLCFLGRVEEALGIL 208
C + +M +G PA + TYN+++ GLC +V++A+ +L
Sbjct: 236 DGLCKSRRIYDVWDFIGEMHDRG---------QPANIITYNSLLDGLCKNHQVDKAITLL 286
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ G+ P+ +Y I++ G C+N LR A E+ ++ K Y + D
Sbjct: 287 TKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNK----------GYQL----D 332
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
Y +IN C +G L + L+L +M PD V + I L + R +
Sbjct: 333 ARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNE 385
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 144/330 (43%), Gaps = 53/330 (16%)
Query: 126 LSEAYHL--FQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG--- 180
+++ +HL + +L PD + + T++ C + S ++ +MI K + PD VT
Sbjct: 21 IAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTL 80
Query: 181 -FSPALFTYNAII--HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+S F Y I +G LG+++EA+G+L M ++P+ ++ ++ G C++ E++
Sbjct: 81 IYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVK 140
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQG----------------------LSDEDTYASL 275
KA + M ++ V + VTY LM G + +Y +
Sbjct: 141 KARNVLAIMIKQRVEP-NIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVM 199
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
IN C + + L EM K +PD+V + LI+GL K R D I +
Sbjct: 200 INGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWD----FIGEMH 255
Query: 336 YTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
P N I Y++L++ C N++ + L+ +G+ +P+
Sbjct: 256 DRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGI----------------RPNIY 299
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
Y +L+ C+ + A +Y +++ G+
Sbjct: 300 TYTILVDGLCKNGRLRDAQEVYQDLLNKGY 329
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 179/445 (40%), Gaps = 79/445 (17%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S ++ ++ TY I+ +R++ GI + M ++G PD ++Y +I C
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA E ++M PD TY +L+ L + EM PD +T+T L+
Sbjct: 323 KAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILI 382
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A C G+ +AF M M KG+ P+ L TYN +I GL R++EAL +L
Sbjct: 383 EALCKSGDVDRAFDMLDVMTTKGIFPN--------LHTYNTMICGLLKARRLDEALELLE 434
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ----- 264
M +G+ P A SY++ I + ++ + KA + M ++ + A L
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494
Query: 265 ---------------GLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
GLS D TY L+ Y G++ K L EM KG PD +I +
Sbjct: 495 RISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIIN 554
Query: 309 LLINGLDKKART----------KDTKAHLLLIIADYMYTSM------------------- 339
LIN L K R K+ K ++ + + T +
Sbjct: 555 SLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTES 614
Query: 340 ---PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
PN I +++L++ S N+ V+ A + M N PD YN
Sbjct: 615 GCPPNTITFNSLLDCLSKND---------------AVDLALKMFCRMTMMNCNPDVLTYN 659
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRY 421
+I+ R + A+ + +M ++
Sbjct: 660 TIIYGLIREGRIDYAFWFFHQMKKF 684
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 171/392 (43%), Gaps = 44/392 (11%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEK-GLSPDALSYRYVITGFCNNRCPGK 93
S+ QD +IK C ++ + + G+ P SY ++ G + K
Sbjct: 755 SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEK 814
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A E +M G P+ FTY+ L+ A +R+++ Y L+ EM S P+ IT ++
Sbjct: 815 ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A +KA ++++++ FSP TY +I GL GR E+A+ I
Sbjct: 875 ALVKSNNLNKALDLYYELMSG--------DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEE 926
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + G P++V Y I+I+GF ++ E+ A EL +M ++ + D
Sbjct: 927 MLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR--------------PDLK 972
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
+Y L+ C G + + + +E+ G PD+V + +INGL K R +
Sbjct: 973 SYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDE-------- 1024
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
A +++ M N I + + + L+ + G V+ A + ++ + +P
Sbjct: 1025 -ALSLFSEMKNRGI---------SPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEP 1074
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
YN LI H N +A++++ +M+ G
Sbjct: 1075 SVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 184/448 (41%), Gaps = 53/448 (11%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
+R+E V + M +K + + +Y + G+A +M + G + +A++Y
Sbjct: 145 RRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSY 204
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
+ LI L +EA +++ M+S P T++ LM A G+ K ++ +M
Sbjct: 205 NGLIHLLLPGF-CNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEM-- 261
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
K + G P ++TY I L R+++A GI + M + G PD ++Y ++I
Sbjct: 262 KSI------GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDAL 315
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----------------------D 268
C +L KA EL V+M R D VTY LM D
Sbjct: 316 CAAGKLDKAKELYVKM-RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR--------- 319
TY LI A C G++ + + D M+ KG P+ + +I GL K R
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434
Query: 320 ------TKDTKAHLLLIIADYMYTSMPNYII--YDTLIENCSNNEFKSVVGLVKSFSMRG 371
K T +L I Y + P I ++T+ + + + + + G
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
++EA + + + PD YN+L+ + + + KA + EM+ G + +
Sbjct: 495 RISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIIN 554
Query: 432 ALLTALRDHGMYNERSWVIQNTLRSCNL 459
+L+ L G + +W + L++ L
Sbjct: 555 SLINTLYKAGRV-DAAWKMFGRLKNLKL 581
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY +I R E+ + I M + G P+++ Y +I GF + A E +M
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
++GI PD +Y+ L++ LC R+ EA F+E+ PD +++ +++
Sbjct: 963 VKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022
Query: 159 SKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAI 191
+A + +M ++G+ PD T G P++FTYNA+
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
I G G ++A + + M +G SP+ ++
Sbjct: 1083 IRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/486 (19%), Positives = 173/486 (35%), Gaps = 107/486 (22%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TYN ++ ++ K + + M E G P+ +++ ++ N A +
Sbjct: 585 VVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFC 644
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLM-------- 149
M PD TY+++I L + R+ A+ F +M PD +T TL+
Sbjct: 645 RMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGR 704
Query: 150 ------------HACCL----------------EGEFSKAFHMHHQMIHKGVLPD----- 176
H CL E E +A ++ V D
Sbjct: 705 VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764
Query: 177 ---------------------FVT--GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
F G P L +YN ++ GL E+AL + M
Sbjct: 765 PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED--- 270
G P+ +Y +++ +++ + K Y+L EM R + +T+ ++ L +
Sbjct: 825 AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM-RSRGCEPNAITHNIIISALVKSNNLN 883
Query: 271 -------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
TY LI+ G + + + +EM G P+SVI ++LI
Sbjct: 884 KALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943
Query: 312 NGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRG 371
NG K D L + +++ + KS LV+ + G
Sbjct: 944 NGFGKSGEI-DFACEL-----------------FKKMVKEGIRPDLKSYTILVECLCITG 985
Query: 372 LVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
++EA + + + PD YN +I + + +A +++ EM G +++
Sbjct: 986 RIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYN 1045
Query: 432 ALLTAL 437
AL+ L
Sbjct: 1046 ALILHL 1051
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 25 CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG 84
C E I+ DL +Y +++ C+ R+++ V + GL PD +SY ++I G
Sbjct: 956 CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015
Query: 85 FCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPD 141
+R +A EM +GI PD +TY++LI L ++ A +++E+ P
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS--PALFTYNAIIH---GLC 196
T+ L+ L G +AF + +M+ G P+ T F+ P + ++H G
Sbjct: 1076 VFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET-FAQLPNKYPRAGLVHNPFGAV 1134
Query: 197 FLG 199
F+G
Sbjct: 1135 FIG 1137
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 185/476 (38%), Gaps = 92/476 (19%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + D+ N +I RV+ + + L+P ++Y ++TG
Sbjct: 543 SKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKIL 602
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLM 149
KA E M + G P+ T++SL+ L + A +F M PD +T+ T++
Sbjct: 603 KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ EG AF HQM K + PD+VT +I G+ GRVE+A+ ++
Sbjct: 663 YGLIREGRIDYAFWFFHQM-KKFLSPDYVT--------LCTLIPGVVRHGRVEDAIKVVM 713
Query: 210 G----------------MPEMGLSP----DAVSY--IIVISGFCQNRELRKAYELKVEMD 247
+ E L+ +A+S+ I+V + CQ+ + +KV
Sbjct: 714 EFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPL-IKVLCK 772
Query: 248 RKVVWGLDEV---------------TYAYLMQGLSDED---------------------- 270
RK V +Y LM GL +
Sbjct: 773 RKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNF 832
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR-TKDTKAHLLL 329
TY L++A+ + K+ L EM +G P+++ +++I+ L K K + L
Sbjct: 833 TYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYEL 892
Query: 330 IIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
+ D+ P Y LI+ GL+K+ G +A + + ML+
Sbjct: 893 MSGDFS----PTPCTYGPLID-----------GLLKA----GRSEQAMKIFEEMLDYGCG 933
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
P+ +YN+LI + + A ++ +MV+ G + S L+ L G +E
Sbjct: 934 PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDE 989
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + + T+N II + K + + + SP +Y +I G
Sbjct: 859 SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A + EM G P++ Y+ LI + A LF++M+ PD ++T L+
Sbjct: 919 QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C+ G +A ++ G+ PD V +YN II+GL R++EAL +
Sbjct: 979 ECLCITGRIDEAVQYFEELKLTGLDPDTV--------SYNFIINGLGKSRRLDEALSLFS 1030
Query: 210 GMPEMGLSPDAVSYIIVI 227
M G+SPD +Y +I
Sbjct: 1031 EMKNRGISPDLYTYNALI 1048
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 45/352 (12%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEM-DQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
P+ + ++ C A+E EM + K P+ TYS+L+ LC RL EA+
Sbjct: 235 PNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFE 294
Query: 132 LFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
LF+EM+S PD +T+ L++ C EG+ +A ++ M + G P+ +F
Sbjct: 295 LFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPN--------VFN 346
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
Y+A++ GLC G++++A G+L M GL PDA++Y +I+ F +N ++ +A EL EM
Sbjct: 347 YSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMK 406
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
D VT+ ++ GL C +G + L + +++ +G +
Sbjct: 407 ENDCQA-DTVTFNVILGGL-------------CREGRFDEALDMIEKLPQQGVYLNKGSY 452
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
+++N L + + L L+++ +P+Y + L+ V L K
Sbjct: 453 RIVLNSLTQNCELRKANKLLGLMLSRGF---VPHYATSNELL-----------VRLCKE- 497
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
G+ N+AA A +++ ++P + LLI CR + + + E+V
Sbjct: 498 ---GMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDELV 546
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ Y+ ++ C +++ G+L M GL PDA++Y +I F N +A E
Sbjct: 343 NVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELL 402
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI-----TFTTLMHACC 153
EM + D T++ ++ LC + R EA + +++ P + ++ ++++
Sbjct: 403 TEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKL--PQQGVYLNKGSYRIVLNSLT 460
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
E KA + M+ +G +P + T N ++ LC G +A L + +
Sbjct: 461 QNCELRKANKLLGLMLSRGFVPHYATS--------NELLVRLCKEGMANDAATALFDLVD 512
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
MG P S+ ++I C++R+L +EL E+
Sbjct: 513 MGFQPQHDSWELLIDLICRDRKLLYVFELLDEL 545
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 123/302 (40%), Gaps = 69/302 (22%)
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS-PDAVSYIIVISGFCQNRELRKA 239
+ P + +N ++ C G ++ A +++ M S P+ ++Y ++ G C+N L++A
Sbjct: 233 YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEA 292
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+EL EM K D++ + D TY LIN +C +G+ + + + M + G
Sbjct: 293 FELFEEMVSK-----DQI--------VPDPLTYNVLINGFCREGKADRARNVIEFMKNNG 339
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFK 358
P+ S L++GL K + +D K ++A+ + + P+ I Y +LI
Sbjct: 340 CCPNVFNYSALVDGLCKAGKLQDAKG----VLAEMKSSGLKPDAITYTSLIN-------- 387
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME- 417
FS G ++EA M E + + D +N+++ CR +A +M +
Sbjct: 388 -------FFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKL 440
Query: 418 ----------------------------------MVRYGFVSHMFSVLALLTALRDHGMY 443
M+ GFV H + LL L GM
Sbjct: 441 PQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMA 500
Query: 444 NE 445
N+
Sbjct: 501 ND 502
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 32/294 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVG-------ILRGMAEKGLSPDALSYRYVITGFCNN 88
I ++ TYN +I ++ ++++ VG +L M ++ + PD ++Y ++ G+
Sbjct: 239 IHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLV 298
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITF 145
+ KA + +G+ P+ F+Y+ +I LC + + EA +LF+EM S P+ +T+
Sbjct: 299 KEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTY 358
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ C G S + +M +G D + TYN++ GLC +V+ A+
Sbjct: 359 NSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDII--------TYNSLFDGLCKNHQVDRAI 410
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+L+ + + G+ P SY I+ G C+N L A E+ ++ K Y +
Sbjct: 411 ALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIK----------GYHL-- 458
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
D Y +IN C +G + L+L +M G PD V ++I L + R
Sbjct: 459 --DAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDR 510
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ TY+ ++ + L++ V K + ++ +G++P+ SY +I G C N+ +
Sbjct: 279 QRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDE 338
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A EM K ++P+ TY+SLI LC R+S+ + EM P D IT+ +L
Sbjct: 339 AVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFD 398
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + +A + ++ +G+ P++++Y + GLC GR+E+A + R
Sbjct: 399 GLCKNHQVDRAIALLKKIKDQGI--------QPSMYSYTILFVGLCKNGRLEDAQEVYRD 450
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G DA Y ++I+G C+ +A L +M D VTY +++ L + D
Sbjct: 451 LTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTP-DGVTYEIIIRALFESD 509
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 194/463 (41%), Gaps = 72/463 (15%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L + + + F+ + IQ D+ T + +I C + ++ IL +
Sbjct: 71 FGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKIL 130
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P+ ++ +I G C N KA F + KG + +Y LI LC
Sbjct: 131 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 190
Query: 128 EAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
A L +++ L PD + + T++ C + S + ++ +MI V P
Sbjct: 191 AALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMI--------VNKIHPN 242
Query: 185 LFTYNAIIHGLCFLGRVEEALG-------ILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ TYN +I+G LG+++EA+G +L M + + PD V+Y ++ G+ +E+
Sbjct: 243 VITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVN 302
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
KA L + + G+ ++Y + +IN C + + + L EM
Sbjct: 303 KAKHL---FNTLSLRGVTPNVFSYNI-----------MINGLCKNKMVDEAVNLFKEMHS 348
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT-SMPNYII-YDTLIEN-CSN 354
K +P++V + LI+GL K R D + D M+ P II Y++L + C N
Sbjct: 349 KDMIPNTVTYNSLIDGLCKLGRVSDVWDFI-----DEMHDRGQPTDIITYNSLFDGLCKN 403
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
++ + L+K +G+ +P Y +L C+ + A +
Sbjct: 404 HQVDRAIALLKKIKDQGI----------------QPSMYSYTILFVGLCKNGRLEDAQEV 447
Query: 415 YMEMVRYGF--VSHMFSV--------------LALLTALRDHG 441
Y ++ G+ + M++V L+LL+ ++D+G
Sbjct: 448 YRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNG 490
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + + TYN +I C + RV + M ++G D ++Y + G C N
Sbjct: 347 HSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQV 406
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTL 148
+A ++ +GI P ++Y+ L LC RL +A +++++ D +T +
Sbjct: 407 DRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVM 466
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ C EG F +A + +M G PD V TY II L R ++A+ +
Sbjct: 467 INGLCKEGFFDEALSLLSKMKDNGCTPDGV--------TYEIIIRALFESDRNDKAVKFI 518
Query: 209 RGMPEMGL 216
R M GL
Sbjct: 519 REMIARGL 526
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TYN + C +V++ + +L+ + ++G+ P SY + G C N A E
Sbjct: 389 DIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVY 448
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++ KG DA Y+ +I LC + EA L +M PD +T+ ++ A
Sbjct: 449 RDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFES 508
Query: 156 GEFSKAFHMHHQMIHKGVL 174
KA +MI +G+L
Sbjct: 509 DRNDKAVKFIREMIARGLL 527
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 58/318 (18%)
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIH--------------GLCFLGRVEEALGILRGMPEM 214
+H LP F+ A+ ++N I+H L L + A+ M
Sbjct: 38 LHIQPLPSFINNVDDAVSSFNRILHISSTPVFEFGKILSSLVKLNQFNTAVSFSHQMELK 97
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G+ PD V+ I+I+ FC +L A+ + + + + G T T +
Sbjct: 98 GIQPDIVTLSILINSFCHLNQLNYAFSI---LGKILKLGYQPNTV-----------TLTT 143
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LIN C G++ K L D + KG + V +LINGL ++ +TKA L L+
Sbjct: 144 LINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGL---CKSGETKAALQLLEKIK 200
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKS---------VVG-----------LVKSFSMRGLVN 374
+ P+ ++Y+T+I+ ++ S +V L+ FS+ G +
Sbjct: 201 GFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMK 260
Query: 375 EA------AR-AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
EA AR M++ +PD Y+ L+ + V+KA +++ + G ++
Sbjct: 261 EAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNV 320
Query: 428 FSVLALLTALRDHGMYNE 445
FS ++ L + M +E
Sbjct: 321 FSYNIMINGLCKNKMVDE 338
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 32/294 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVG-------ILRGMAEKGLSPDALSYRYVITGFCNN 88
I ++ TYN +I ++ ++++ VG +L M ++ + PD ++Y ++ G+
Sbjct: 239 IHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLV 298
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITF 145
+ KA + +G+ P+ F+Y+ +I LC + + EA +LF+EM S P+ +T+
Sbjct: 299 KEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTY 358
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+L+ C G S + +M +G D + TYN++ GLC +V+ A+
Sbjct: 359 NSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDII--------TYNSLFDGLCKNHQVDRAI 410
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+L+ + + G+ P SY I+ G C+N L A E+ ++ K Y +
Sbjct: 411 ALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIK----------GYHL-- 458
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
D Y +IN C +G + L+L +M G PD V ++I L + R
Sbjct: 459 --DAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDR 510
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ TY+ ++ + L++ V K + ++ +G++P+ SY +I G C N+ +
Sbjct: 279 QRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDE 338
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A EM K ++P+ TY+SLI LC R+S+ + EM P D IT+ +L
Sbjct: 339 AVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFD 398
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + +A + ++ +G+ P++++Y + GLC GR+E+A + R
Sbjct: 399 GLCKNHQVDRAIALLKKIKDQGI--------QPSMYSYTILFVGLCKNGRLEDAQEVYRD 450
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G DA Y ++I+G C+ +A L +M D VTY +++ L + D
Sbjct: 451 LTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTP-DGVTYEIIIRALFESD 509
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 194/463 (41%), Gaps = 72/463 (15%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
F L + + + F+ + IQ D+ T + +I C + ++ IL +
Sbjct: 71 FGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKIL 130
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
+ G P+ ++ +I G C N KA F + KG + +Y LI LC
Sbjct: 131 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 190
Query: 128 EAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
A L +++ L PD + + T++ C + S + ++ +MI V P
Sbjct: 191 AALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMI--------VNKIHPN 242
Query: 185 LFTYNAIIHGLCFLGRVEEALG-------ILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ TYN +I+G LG+++EA+G +L M + + PD V+Y ++ G+ +E+
Sbjct: 243 VITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVN 302
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
KA L + + G+ ++Y + +IN C + + + L EM
Sbjct: 303 KAKHL---FNTLSLRGVTPNVFSYNI-----------MINGLCKNKMVDEAVNLFKEMHS 348
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT-SMPNYII-YDTLIEN-CSN 354
K +P++V + LI+GL K R D + D M+ P II Y++L + C N
Sbjct: 349 KDMIPNTVTYNSLIDGLCKLGRVSDVWDFI-----DEMHDRGQPTDIITYNSLFDGLCKN 403
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
++ + L+K +G+ +P Y +L C+ + A +
Sbjct: 404 HQVDRAIALLKKIKDQGI----------------QPSMYSYTILFVGLCKNGRLEDAQEV 447
Query: 415 YMEMVRYGF--VSHMFSV--------------LALLTALRDHG 441
Y ++ G+ + M++V L+LL+ ++D+G
Sbjct: 448 YRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNG 490
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + + TYN +I C + RV + M ++G D ++Y + G C N
Sbjct: 347 HSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQV 406
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTL 148
+A ++ +GI P ++Y+ L LC RL +A +++++ D +T +
Sbjct: 407 DRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVM 466
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
++ C EG F +A + +M G PD V TY II L R ++A+ +
Sbjct: 467 INGLCKEGFFDEALSLLSKMKDNGCTPDGV--------TYEIIIRALFESDRNDKAVKFI 518
Query: 209 RGMPEMGL 216
R M GL
Sbjct: 519 REMIARGL 526
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TYN + C +V++ + +L+ + ++G+ P SY + G C N A E
Sbjct: 389 DIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVY 448
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++ KG DA Y+ +I LC + EA L +M PD +T+ ++ A
Sbjct: 449 RDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFES 508
Query: 156 GEFSKAFHMHHQMIHKGVL 174
KA +MI +G+L
Sbjct: 509 DRNDKAVKFIREMIARGLL 527
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 58/318 (18%)
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIH--------------GLCFLGRVEEALGILRGMPEM 214
+H LP F+ A+ ++N I+H L L + A+ M
Sbjct: 38 LHIQPLPSFINNVDDAVSSFNRILHISSTPVFEFGKILSSLVKLNQFNTAVSFSHQMELK 97
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G+ PD V+ I+I+ FC +L A+ + + + + G T T +
Sbjct: 98 GIQPDIVTLSILINSFCHLNQLNYAFSI---LGKILKLGYQPNTV-----------TLTT 143
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
LIN C G++ K L D + KG + V +LINGL ++ +TKA L L+
Sbjct: 144 LINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGL---CKSGETKAALQLLEKIK 200
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKS---------VVG-----------LVKSFSMRGLVN 374
+ P+ ++Y+T+I+ ++ S +V L+ FS+ G +
Sbjct: 201 GFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMK 260
Query: 375 EA------AR-AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
EA AR M++ +PD Y+ L+ + V+KA +++ + G ++
Sbjct: 261 EAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNV 320
Query: 428 FSVLALLTALRDHGMYNE 445
FS ++ L + M +E
Sbjct: 321 FSYNIMINGLCKNKMVDE 338
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 170/390 (43%), Gaps = 55/390 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
IQ D+ N ++ C + ++ +L + + G PD ++ +I G C +
Sbjct: 74 IQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSG------ 127
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLE 155
+++ + P+ YS++I +LC K +LS A + Q + P+ +T+T+LM L
Sbjct: 128 ----QIEGLLVKPNVVMYSTIIDSLC-KDKLSGAVMIKQGV--EPNVVTYTSLMDGYFLV 180
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
E +KA ++ + + +GV +P L +YN +I+GLC V EA + + M
Sbjct: 181 KEVNKATYIFNTIAQRGV--------TPELHSYNVMINGLCKNKMVNEAANLFKDMHSRN 232
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++PD +SY +I G C++ + ++L EM + Q + + TY SL
Sbjct: 233 MTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRC-------------QPV-NVITYNSL 278
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
++A C ++ K + L +M +G P+ ++L++GL K R D + I D +
Sbjct: 279 LDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADARE----IYHDLL 334
Query: 336 YTSMP-NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
P N +Y+ +V F GL +EA M + PD
Sbjct: 335 TKGYPLNVSMYNV---------------MVNEFCKEGLFDEALSLLSKMEDNGCTPDAIT 379
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y LI KA + EM+ G +
Sbjct: 380 YQTLICALFENNKNDKAVKLLREMIVRGLL 409
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 33/251 (13%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TY ++ + L++ V K I +A++G++P+ SY +I G C N+ +
Sbjct: 161 QGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKMVNE 220
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMH 150
A +M + + PD +Y+SLI LC +S+ + L EM P + IT+ +L+
Sbjct: 221 AANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLD 280
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSP 183
A C + KA + +M +G+ P+ T G+
Sbjct: 281 ALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPL 340
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ YN +++ C G +EAL +L M + G +PDA++Y +I +N + KA +L
Sbjct: 341 NVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFENNKNDKAVKLL 400
Query: 244 VEMDRKVVWGL 254
EM +V GL
Sbjct: 401 REM---IVRGL 408
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/404 (19%), Positives = 161/404 (39%), Gaps = 90/404 (22%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+ KI+ + + + R + +G+ D ++ ++ FC A+ ++
Sbjct: 46 FGKILGSLVKINHFHTVISLSRLIELRGIQTDIVNLNILVNCFCQLGQLNYAFSVLAKIL 105
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAF 162
+ G PD T ++LI+ LC ++ + +L P+ + ++T++ + C + + S A
Sbjct: 106 KMGYQPDTVTLTTLIKGLCRSGQI-------EGLLVKPNVVMYSTIIDSLC-KDKLSGAV 157
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
MI +GV P+ VT Y +++ G + V +A I + + G++P+ S
Sbjct: 158 -----MIKQGVEPNVVT--------YTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHS 204
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y ++I+G C+N+ + +A L +M + D +Y SLI+ C
Sbjct: 205 YNVMINGLCKNKMVNEAANLFKDMHSR--------------NMTPDTISYNSLIDGLCKS 250
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
G + V L DEM H P N
Sbjct: 251 GSISDVWDLIDEM-HNRCQP-------------------------------------VNV 272
Query: 343 IIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
I Y++L++ C N++ + L+K +G+ +P+ Y +L+
Sbjct: 273 ITYNSLLDALCKNHQVDKAIALLKKMKDQGI----------------QPNMYTYTILVDG 316
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
C+ + A +Y +++ G+ ++ ++ G+++E
Sbjct: 317 LCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDE 360
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 34/333 (10%)
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
+LI +L +SE H+ L+PP F ++ + F + + +G+
Sbjct: 17 NLIHSLNVDHYVSEFNHMLNIKLTPPI-FKFGKILGSLVKINHFHTVISLSRLIELRGIQ 75
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
D V N +++ C LG++ A +L + +MG PD V+ +I G C++
Sbjct: 76 TDIVN--------LNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSG 127
Query: 235 ELRK-AYELKVEMDRKVVWGL--DEVTYAYLM-QGLS-DEDTYASLINAYCAQGELFKVL 289
++ + V M ++ L D+++ A ++ QG+ + TY SL++ Y E+ K
Sbjct: 128 QIEGLLVKPNVVMYSTIIDSLCKDKLSGAVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAT 187
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTL 348
+ + ++ +G P+ +++INGL K + + D +M P+ I Y++L
Sbjct: 188 YIFNTIAQRGVTPELHSYNVMINGLCKNKMVNEAAN----LFKDMHSRNMTPDTISYNSL 243
Query: 349 IENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
I+ GL KS S+ + + H+ N YN L+ C+ V
Sbjct: 244 ID-----------GLCKSGSISDVWDLIDEMHNRCQPVNV----ITYNSLLDALCKNHQV 288
Query: 409 HKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
KA + +M G +M++ L+ L +G
Sbjct: 289 DKAIALLKKMKDQGIQPNMYTYTILVDGLCKNG 321
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 160/334 (47%), Gaps = 38/334 (11%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG 156
+++ K + D Y+++I LC + +++AY L+ EM++ PD TF +L++ C+ G
Sbjct: 7 QIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIG 66
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ AF + QM+ K + +P+++T+ ++ GLC G+++EA ++ M + G+
Sbjct: 67 QLKDAFGLFSQMVLKNI--------NPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGV 118
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
P+ V+Y ++ G+C E+ K + + R M + +Y +I
Sbjct: 119 LPNVVTYTSIMEGYCLVNEVNKTKHVFRTISR--------------MGVAPNTQSYNIMI 164
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMY 336
N +C + + L L EM +G +P +V S LI+GL K +L++ +Y
Sbjct: 165 NGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIY 224
Query: 337 TSMPNYIIY-DTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA-----HDTMLEGNYKP 390
P ++Y D L C +N + LVK +G+ ++ + D +++G Y
Sbjct: 225 ---PLTVLYIDAL---CKSNHLDKAIALVKKIKDQGIQSDILKNAQDVFQDLLIKG-YSL 277
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ YN++I C+ +A + +M YG +
Sbjct: 278 NIQTYNIMINGLCKEGLFDEAEALLSKMDDYGII 311
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 55/350 (15%)
Query: 69 KGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSE 128
K ++ D + Y +I G C ++ AYE EM + I PD T++SLI C +L +
Sbjct: 11 KLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKD 70
Query: 129 AYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
A+ LF +M+ P TFT L+ C EG+ +A + M+ GVLP+ V
Sbjct: 71 AFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVV------- 123
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TY +I+ G C + V + + R + MG++P+ SY I+I+GFC+ + + +A L E
Sbjct: 124 -TYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKE 182
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASL-------------------INAYCAQGELF 286
M + + + VTY+ L+ GL SL I+A C L
Sbjct: 183 MCCRGIVPI-TVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLD 241
Query: 287 KVLTLDDEMSHKGSLPDSVIDS--------------------LLINGLDKKARTKDTKAH 326
K + L ++ +G D + ++ ++INGL K+ + +A
Sbjct: 242 KAIALVKKIKDQGIQSDILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEA- 300
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENC-SNNEFKSVVGLVKSFSMRGLVNE 375
LL + D Y +P+ + Y+T I +E + L + RGL+ E
Sbjct: 301 LLSKMDD--YGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGLLKE 348
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + ++ TY I++ +CL+ V K + R ++ G++P+ SY +I GFC + +
Sbjct: 116 DGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNE 175
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH--A 151
A EM +GI+P TYSSLI LC L L + ML I T+++ A
Sbjct: 176 ALILFKEMCCRGIVPITVTYSSLIDGLCKSTMLGSL--LMRCMLMVNHLIYPLTVLYIDA 233
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPD------------FVTGFSPALFTYNAIIHGLCFLG 199
C KA + ++ +G+ D + G+S + TYN +I+GLC G
Sbjct: 234 LCKSNHLDKAIALVKKIKDQGIQSDILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEG 293
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+EA +L M + G+ PDAV+Y I E KA +L
Sbjct: 294 LFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKL 336
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 20/282 (7%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E I D+AT+N +I C++ +++ G+ M K ++P ++ ++ G C
Sbjct: 45 AEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMK 104
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ---EMLSPPDDITFTTLM 149
+A M + G+LP+ TY+S+++ C +++ H+F+ M P+ ++ ++
Sbjct: 105 EAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMI 164
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C ++A + +M +G++P V TY+++I GLC + L
Sbjct: 165 NGFCKIKIVNEALILFKEMCCRGIVPITV--------TYSSLIDGLCKSTMLGSLLMRCM 216
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL--KVE---MDRKVVWGLDEVTYAYLMQ 264
M + P V Y I C++ L KA L K++ + ++ +V L++
Sbjct: 217 LMVNHLIYPLTVLY---IDALCKSNHLDKAIALVKKIKDQGIQSDILKNAQDVFQDLLIK 273
Query: 265 GLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
G S + TY +IN C +G + L +M G +PD+V
Sbjct: 274 GYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAV 315
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
++ D V Y +I G C+++ + AYEL EM + + D T+ SL
Sbjct: 13 VNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKIS--------------PDVATFNSL 58
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I +C G+L L +M K P ++L++GL K+ + K+ K+ + +++ D +
Sbjct: 59 IYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGV 118
Query: 336 YTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+PN + Y +++E C NE VN+ T+ P+
Sbjct: 119 ---LPNVVTYTSIMEGYCLVNE----------------VNKTKHVFRTISRMGVAPNTQS 159
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
YN++I C+ V++A ++ EM G V + +L+ L
Sbjct: 160 YNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGL 202
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 172/380 (45%), Gaps = 68/380 (17%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEG 156
EM+ KG+ P FTY++LI LC + A + +ML PD TF ++ +
Sbjct: 131 EMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKE 190
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ +A + ++M+ GV+PD L ++++II G + AL M +GL
Sbjct: 191 DVWEAERVFNEMLQCGVVPD--------LISFSSIIGVFSRNGELGRALAYFEKMKGVGL 242
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGL------SDE 269
PD V Y I+I+G+C+N ++ A +++ EM +R V +D VTY L+ GL D
Sbjct: 243 VPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCV--MDVVTYNTLLNGLCRGKMLDDA 300
Query: 270 D----------------TYASLINAYCAQG------ELFKVLTLDDEMSHKGSL------ 301
D T +LI+ YC G LF+ +TL EM L
Sbjct: 301 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMIS 360
Query: 302 ----PDSVIDSLLINGLDKKARTKDT------KAHLLLIIADYMYTSM-----PNYIIYD 346
P + S+LING ++ +A + D++ T + P+ I Y+
Sbjct: 361 REIFPHYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYN 420
Query: 347 TLIENCSNN--EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
TLI + + +++G FS G + EA M++ PD + Y +I +
Sbjct: 421 TLINRLLPDLVTYNAILG---GFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVS 477
Query: 405 RLNVHKAYNMYMEMVRYGFV 424
+ N+ +A+ ++ EM++ GFV
Sbjct: 478 KDNMKEAFRVHDEMLQRGFV 497
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 84/339 (24%)
Query: 13 KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
+ F M++ GVV DL +++ II + + + M GL
Sbjct: 197 RVFNEMLQCGVV-------------PDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLV 243
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
PD + Y +I G+C N A + + EM ++ + D TY++L+ LC + L +A L
Sbjct: 244 PDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADEL 303
Query: 133 FQEMLSP---PDDITFTTLMHACCLEG----------------EFSKAFHMHHQMIHKGV 173
F+EM+ PD T TTL+H C +G E KA + MI + +
Sbjct: 304 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREI 363
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL--GILR-----------------GMPEM 214
P ++ +++ +I+G C LG V E+L G LR G+P
Sbjct: 364 FPHYI--------SFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPD 415
Query: 215 GLS---------PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
++ PD V+Y ++ GF ++ +++A EM V + + +G
Sbjct: 416 CITYNTLINRLLPDLVTYNAILGGFSRHGRMQEA-----EM----------VLHKMIDKG 460
Query: 266 LS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
++ D+ TY S+IN Y ++ + + + DEM +G +PD
Sbjct: 461 INPDKSTYTSVINGYVSKDNMKEAFRVHDEMLQRGFVPD 499
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 164/379 (43%), Gaps = 33/379 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ ++ L TYN +I C E +L M G PDA ++ V+
Sbjct: 134 AKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVW 193
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A EM Q G++PD ++SS+I L A F++M PD + +T L+
Sbjct: 194 EAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 253
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C + S A + ++M+ + + D VT YN +++GLC +++A + +
Sbjct: 254 NGYCRNNDVSGALKVRNEMVERSCVMDVVT--------YNTLLNGLCRGKMLDDADELFK 305
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL------KVEMDR-KVVWG--------L 254
M E G+ PD + +I G+C++ + KA L + EM++ K +W
Sbjct: 306 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFP 365
Query: 255 DEVTYAYLMQGLSDEDTYA-SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
++++ L+ G + SLI Y G + K + M +G PD + + LIN
Sbjct: 366 HYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINR 425
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNY-IIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
L D + ++ + M ++ +I+ N + + ++ + +
Sbjct: 426 L-----LPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDN 480
Query: 373 VNEAARAHDTMLEGNYKPD 391
+ EA R HD ML+ + PD
Sbjct: 481 MKEAFRVHDEMLQRGFVPD 499
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 124/282 (43%), Gaps = 45/282 (15%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTA---ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
SF++ + F RNG + R A + D Y +I +C V + +
Sbjct: 213 SFSSIIGVFS---RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVR 269
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
M E+ D ++Y ++ G C + A E EM ++G+ PD +T ++LI C
Sbjct: 270 NEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 329
Query: 124 RRLSEAYHLFQ----------------EMLSP---PDDITFTTLMHACC----------- 153
+++A LF+ +M+S P I+F+ L++ C
Sbjct: 330 GNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESLIK 389
Query: 154 ---LEGEFSKAFHMHHQMIHKGVLPDFVT------GFSPALFTYNAIIHGLCFLGRVEEA 204
G SKA + M+ +GV PD +T P L TYNAI+ G GR++EA
Sbjct: 390 GYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRMQEA 449
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
+L M + G++PD +Y VI+G+ +++A+ + EM
Sbjct: 450 EMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEM 491
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 157/375 (41%), Gaps = 41/375 (10%)
Query: 109 DAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC-CLEGEFSKAFHMHHQ 167
+ + LI+ R+L E + FQ + F ++AC L G K +
Sbjct: 76 NVVVFDLLIRTYVQARKLREGFEAFQLLRKR----GFCVSINACNALLGSIVKVRVYLSE 131
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
M KG+ P LFTYNA+I+GLC G E A +L M +G PDA ++ V+
Sbjct: 132 MEAKGL--------KPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVL 183
Query: 228 SGFCQNRELRKAYELKVEMDRKV-VWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGEL 285
VE RK VW + V L G + D +++S+I + GEL
Sbjct: 184 ----------------VESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGEL 227
Query: 286 FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIY 345
+ L ++M G +PD+VI ++LING R D L + + + + + Y
Sbjct: 228 GRALAYFEKMKGVGLVPDTVIYTILINGY---CRNNDVSGALKVRNEMVERSCVMDVVTY 284
Query: 346 DTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCR 404
+TL+ C L K RG+ + T++ G K L +F+
Sbjct: 285 NTLLNGLCRGKMLDDADELFKEMVERGVFPDFY-TLTTLIHGYCKDGNMTKALSLFETIT 343
Query: 405 -RLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSE 463
R + KA ++ +M+ H S L+ G+ +E +I+ LR+ N+ S+
Sbjct: 344 LRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSES--LIKGYLRAGNV--SK 399
Query: 464 LHKVLNEIDTRKFPP 478
+ LN + + PP
Sbjct: 400 ANDFLNTMVSEGVPP 414
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 138/284 (48%), Gaps = 5/284 (1%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S I D+ Y IK +CL + +K I + M EKG PD ++Y + G C NR
Sbjct: 433 SMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVS 492
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A + MD +G+ P++ T+ +I+ CS+ ++ EA F M +I +T ++
Sbjct: 493 EAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEI-YTAMVSGY 551
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP-ALFTYNAIIHGLCFLGRVEEALGILRGM 211
C K++ + H++ ++G + + Y+ ++ LC G ++ A +
Sbjct: 552 CEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFF 611
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
G +PD V+Y I+I +C L++A++L +M + + D +TY L+ G S +
Sbjct: 612 LGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKP-DVITYTVLLDGKSKQAR 670
Query: 272 YASLINAYCAQGE--LFKVLTLDDEMSHKGSLPDSVIDSLLING 313
++ +G+ + V T+ +M + PD VI ++LI+G
Sbjct: 671 SKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDG 714
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 172/417 (41%), Gaps = 47/417 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y I+ C + + G +LR + E D +Y VI GFCN KA + +M+
Sbjct: 268 YAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDME 327
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFS 159
+ ++PD YSSLI C L +A L+++M+ + + + ++H GE S
Sbjct: 328 WQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDS 387
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+ ++ GV D V YN + L LG+++E G+L + M + D
Sbjct: 388 RVVDTFKEVKQSGVFLDGV--------AYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFD 439
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAY 279
Y I G+C + KAY + EM+ K + D V Y L GL
Sbjct: 440 IKHYTTFIKGYCLQGKPDKAYIIFKEMEEK-GFKPDVVAYNVLAAGL------------- 485
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY--MYT 337
C + + + L + M +G P+S ++I G + + ++ + + + + +YT
Sbjct: 486 CGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYT 545
Query: 338 SM-----------PNYIIY-------DTLIENCSNNEFKSVV--GLVKSFSMRGLVNEAA 377
+M +Y ++ DT E+ + V+ ++ +G + A
Sbjct: 546 AMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRAR 605
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
D L + PD Y ++I +C + +A++++ +M G + + LL
Sbjct: 606 SLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLL 662
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 167/443 (37%), Gaps = 104/443 (23%)
Query: 23 VVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI 82
VV F + S + D YN + + ++++ G+L + + D Y I
Sbjct: 389 VVDTFKEVKQS-GVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFI 447
Query: 83 TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD 142
G+C P KAY EM++KG PD Y+ L LC R +SEA L M S
Sbjct: 448 KGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDS---- 503
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+GV P+ T + II G C G++E
Sbjct: 504 ----------------------------QGVKPNSTT--------HKIIIEGFCSEGKIE 527
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK--------VVWGL 254
EA G M + + Y ++SG+C+ + K+YEL E+ + + L
Sbjct: 528 EAEGYFNSMKDESVEI----YTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQL 583
Query: 255 DEVTYA---------------------YLMQGLS-DEDTYASLINAYCAQGELFKVLTLD 292
+V Y+ +L +G + D TY +I +YC L + L
Sbjct: 584 SKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLF 643
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKD--TKAHLLLIIADYMYTSM----------P 340
+M +G PD + ++L++G K+AR+K+ + H A Y +++ P
Sbjct: 644 QDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSP 703
Query: 341 NYIIYDTLIE-NCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
+ +IY LI+ + + F+ + L RGL +PD Y L
Sbjct: 704 DVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGL----------------EPDNVTYTALF 747
Query: 400 FDHCRRLNVHKAYNMYMEMVRYG 422
N A +Y EM G
Sbjct: 748 SGLLNSGNSEIAVTLYNEMSSKG 770
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 28 TAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN 87
TA +S Q Y+K++ + C +++ + +G +PD ++Y +I +C
Sbjct: 573 TAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCT 632
Query: 88 NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH---------------L 132
C +A++ +M +GI PD TY+ L+ + R E + +
Sbjct: 633 MNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTI 692
Query: 133 FQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
+++M PD + +T L+ F A + ++++ +G+ PD V TY
Sbjct: 693 WRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNV--------TYT 744
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A+ GL G E A+ + M G++P
Sbjct: 745 ALFSGLLNSGNSEIAVTLYNEMSSKGMTP 773
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 143/370 (38%), Gaps = 78/370 (21%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK-RRLSE 128
G+ P+ + ++I A+E + G+ P+ TY+ +I+AL +K L +
Sbjct: 189 GILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQ 248
Query: 129 AYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
A +F EM G +P + Y
Sbjct: 249 ASGVFDEMKE----------------------------------------AGVTPNSYCY 268
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
A I GLC + + +LR + E D +Y VI GFC +L KA ++ +M+
Sbjct: 269 AAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDME- 327
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
W + + D Y+SLI YC +L K L L ++M KG + VI S
Sbjct: 328 ---W----------QRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVS 374
Query: 309 LLIN---GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNE--------- 356
+++ + + +R DT + + + I++D+L + +E
Sbjct: 375 CILHCFAEMGEDSRVVDTFKEVKQ--SGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLK 432
Query: 357 -------FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVH 409
K +K + ++G ++A M E +KPD YN+L C +V
Sbjct: 433 SMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVS 492
Query: 410 KAYNM--YME 417
+A ++ YM+
Sbjct: 493 EAMDLLNYMD 502
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 141/294 (47%), Gaps = 27/294 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D+ T+N ++ C V++ +L M ++G+ PD +Y ++ G+ + K
Sbjct: 157 KNISLDVQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNK 216
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A + + G++P +YS +I LC K+ + EA +LF+E+ PD IT+ +L+
Sbjct: 217 ATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLID 276
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C G S + + +M + G D + TYN+++ LC +V++A+ +L
Sbjct: 277 GLCKSGRISDVWDLIDEMHNIGQPADVI--------TYNSLLDALCKNHQVDKAITLLTK 328
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DE 269
+ + G+ P+ +Y I++ G C+N L+ D +VV+ L++G D
Sbjct: 329 IKDQGIQPNMYTYTILVDGLCKNGRLK---------DAQVVY------QNLLIKGYHLDV 373
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
Y+ ++N C +G L+L +M P++V LI L + + T
Sbjct: 374 KMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYETLIRALFENGKNDKT 427
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 187/430 (43%), Gaps = 64/430 (14%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
IQ D+ + +I C + + +L + + G PD ++ V+ G C KA
Sbjct: 6 IQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQVRKAL 65
Query: 96 EFKLEMDQKGILPDAFTYSSLIQ-------------ALCSKRRLSEAYHLFQEMLSP--- 139
F + KG + T+ L +LC + + +A L EM+
Sbjct: 66 HFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLIIDASALCSEMIVKRIF 125
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD +T+TTL+H C+ G+F +A + +QM+ K + D + T+N ++ GLC G
Sbjct: 126 PDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLD--------VQTFNTLVDGLCKEG 177
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
V++A +L M + G+ PD +YI ++ G+ +E+ KA + + R V
Sbjct: 178 EVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGV-------- 229
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+ +Y+ +IN C + + + + L E+ K PD++ + LI+GL K R
Sbjct: 230 ------IPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGR 283
Query: 320 TKDTKAHLLLIIADYMYTSMP-NYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAA 377
D +I + P + I Y++L++ C N++ + L+ +G+
Sbjct: 284 ISDVWD----LIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI----- 334
Query: 378 RAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF--VSHMFSVLALLT 435
+P+ Y +L+ C+ + A +Y ++ G+ M+SV ++
Sbjct: 335 -----------QPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSV--MVN 381
Query: 436 ALRDHGMYNE 445
L G++++
Sbjct: 382 GLCKEGLFDD 391
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 164/398 (41%), Gaps = 77/398 (19%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M+ +GI D S LI C L+ A+ + ++L PD IT TT+M CL G+
Sbjct: 1 MELRGIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQ 60
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFS----------------------------------- 182
KA H H +I KG + VT
Sbjct: 61 VRKALHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLIIDASALCSEMI 120
Query: 183 -----PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
P + TY +IHG C +G+ +EA+G+L M +S D ++ ++ G C+ E++
Sbjct: 121 VKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEVK 180
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+A + M ++ G+D D TY SL++ Y E+ K + + ++
Sbjct: 181 QARNVLAVMIKQ---GVD-----------PDIFTYISLMDGYFLVKEVNKATYVFNTIAR 226
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNE 356
G +P S++INGL KK + D +L + +M P+ I Y++LI+
Sbjct: 227 SGVIPSVQSYSVMINGLCKK-KMVDEAVNLF---KELQIKNMAPDTITYNSLID------ 276
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
GL KS G +++ D M D YN L+ C+ V KA +
Sbjct: 277 -----GLCKS----GRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLT 327
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
++ G +M++ L+ L +G + V QN L
Sbjct: 328 KIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLL 365
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 23/277 (8%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVVCR---FTAARN------SESIQQDLATYNKIIKQHCL 52
++L + + ++TF +V +C+ ARN + + D+ TY ++ + L
Sbjct: 153 QMLLKNISLDVQTFNTLVDG--LCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFL 210
Query: 53 MQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
++ V K + +A G+ P SY +I G C + +A E+ K + PD T
Sbjct: 211 VKEVNKATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTIT 270
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
Y+SLI LC R+S+ + L EM + P D IT+ +L+ A C + KA + ++
Sbjct: 271 YNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIK 330
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
+G+ P ++TY ++ GLC GR+++A + + + G D Y ++++G
Sbjct: 331 DQGI--------QPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNG 382
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
C+ A L +M+ + VTY L++ L
Sbjct: 383 LCKEGLFDDALSLVSKMEDNSCTP-NAVTYETLIRAL 418
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 44/319 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +Y +I C + + +LR + K + +A+ Y VI G ++ A++
Sbjct: 187 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLY 246
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLE 155
EM K I PD TYS+LI+ +L +A LF +M+ PD TF L+ C E
Sbjct: 247 SEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 306
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G KA ++ M+ + + P+ T G P + TY
Sbjct: 307 GRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTY 366
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
+++ G C + +V +A I M + G++ + SY I+I+GFC+ +++ KA +L +EM
Sbjct: 367 CSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH 426
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
K + + D TY SLI+ C G++ L +EM +G P+ + +
Sbjct: 427 KHI--------------IPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN 472
Query: 309 LLINGLDKKARTKDTKAHL 327
++N L K + + + ++
Sbjct: 473 SILNALLTKLKDQGIQPNM 491
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 147/308 (47%), Gaps = 34/308 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ T N IK CL ++ + + + G D +SY +I G C A +
Sbjct: 150 EPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQ 209
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+D K + +A Y+++I + + +++A+ L+ EM++ PD +T++ L+
Sbjct: 210 LLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFF 269
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ G+ A + ++MI + + PD ++T+N ++ G C GR+++A +L M
Sbjct: 270 IVGKLKDAIDLFNKMILENIKPD--------VYTFNILVDGFCKEGRLKKAKNVLDMMMI 321
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG-------- 265
+ P+ ++ ++ GFC++R++++ + M ++ + + VTY LM G
Sbjct: 322 QDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP-NVVTYCSLMDGYCLVKQVN 380
Query: 266 --------------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
++ +Y +IN +C ++ K + L EM HK +PD V + LI
Sbjct: 381 KAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLI 440
Query: 312 NGLDKKAR 319
+GL K +
Sbjct: 441 DGLCKSGK 448
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 39/286 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I D+ TY+ +I+ ++ +++ + + M + + PD ++ ++ GFC
Sbjct: 251 AKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLK 310
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA M + I P+ T+++L+ C R++ E +F M+ P+ +T+ +LM
Sbjct: 311 KAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLM 370
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
CL + +KA + + M +GV + + +YN +I+G C + +V++A+ +
Sbjct: 371 DGYCLVKQVNKAKKIFNTMSQRGV--------TANVHSYNIMINGFCKIKKVDKAMKLFI 422
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSD 268
M + PD V+Y +I G C++ ++ A++L EM DR +
Sbjct: 423 EMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNI-------------- 468
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
TY S++NA L ++ +G P+ D++LI GL
Sbjct: 469 -ITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGL 501
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 164/389 (42%), Gaps = 60/389 (15%)
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
+ Y + T F +N F + Q L AF ++ ++ +L + L Q+
Sbjct: 50 IPYSSISTTFHSNDVDDAVSLFNSLLHQNPTLT-AFEFNKILGSLVKSKHYHTVLSLSQQ 108
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
M P+ +TF L++ C G AF + +++ G PD +T N I
Sbjct: 109 MEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIIT--------LNTFI 160
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
G C G++ +AL + +G D VSY +I+G C+ E R A +L +D K+V
Sbjct: 161 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQ 220
Query: 253 GLDEVTYAYLMQGL----------------------SDEDTYASLINAYCAQGELFKVLT 290
L+ V Y ++ G+ D TY++LI + G+L +
Sbjct: 221 -LNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAID 279
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL-LLIIADYMYTSMPNYIIYDTLI 349
L ++M + PD ++L++G K+ R K K L +++I D PN ++TL+
Sbjct: 280 LFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI----KPNVSTFNTLV 335
Query: 350 EN-CSNNEFK-------------------SVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
+ C + + K + L+ + + VN+A + +TM +
Sbjct: 336 DGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVT 395
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ YN++I C+ V KA +++EM
Sbjct: 396 ANVHSYNIMINGFCKIKKVDKAMKLFIEM 424
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ ++ TY ++ +CL+++V K I M+++G++ + SY +I GFC + K
Sbjct: 357 QGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDK 416
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A + +EM K I+PD TY+SLI LC ++S A+ L EM PP+ IT+ ++++
Sbjct: 417 AMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN 476
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A + L D G P + T +I GLC G++E A +
Sbjct: 477 ALLTK------------------LKD--QGIQPNMHTDTILIKGLCQSGKLEAARKVFED 516
Query: 211 M 211
+
Sbjct: 517 L 517
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 167/391 (42%), Gaps = 75/391 (19%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
+NKI+ + + + + M +G++P+ +++ +I FC A+ ++
Sbjct: 86 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 145
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGE-- 157
+ G PD T ++ I+ C K ++ +A + ++++ D +++ TL++ C GE
Sbjct: 146 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 205
Query: 158 ---------------------------------FSKAFHMHHQMIHKGVLPDFVTGFSPA 184
+ AF ++ +M+ K + PD V
Sbjct: 206 AALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVV------ 259
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
TY+A+I G +G++++A+ + M + PD ++ I++ GFC+ L+KA +
Sbjct: 260 --TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLD 317
Query: 245 EM---------------------DRKVVWGLDEVTYAYLM-QGLS-DEDTYASLINAYCA 281
M DRK+ G + +A +M QG+ + TY SL++ YC
Sbjct: 318 MMMIQDIKPNVSTFNTLVDGFCKDRKMKEG--KTVFAMMMKQGIKPNVVTYCSLMDGYCL 375
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPN 341
++ K + + MS +G + +++ING + K + L I + +P+
Sbjct: 376 VKQVNKAKKIFNTMSQRGVTANVHSYNIMINGF---CKIKKVDKAMKLFIEMHHKHIIPD 432
Query: 342 YIIYDTLIEN-CSNNEFKSVVGLVKSFSMRG 371
+ Y++LI+ C + + LV RG
Sbjct: 433 VVTYNSLIDGLCKSGKISYAFQLVNEMHDRG 463
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ + ++ +YN +I C +++V+K + + M K + PD ++Y +I G C +
Sbjct: 390 SQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKI 449
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHA 151
A++ EM +G P+ TY+S++ AL +K ++ P+ T T L+
Sbjct: 450 SYAFQLVNEMHDRGQPPNIITYNSILNALLTK---------LKDQGIQPNMHTDTILIKG 500
Query: 152 CCLEGEFSKA 161
C G+ A
Sbjct: 501 LCQSGKLEAA 510
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 177/425 (41%), Gaps = 64/425 (15%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
SE ++ ++ TYN ++K C +V+ +L M+ KG PD +SY VI+ C
Sbjct: 172 SEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVD 231
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA E ++ + P Y++LI +C + R EA+ L EM+ P+ I+++T++
Sbjct: 232 KARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
G + + +M FV G P + T+ ++I G GRV +A+G+
Sbjct: 287 SCLSDMGNVELSLAVFGRM--------FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWN 338
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD----RKVVWGLDEVTYAYLMQG 265
M G+SP+ V+Y +I G C + + +A + +M+ R V + Y + G
Sbjct: 339 LMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398
Query: 266 --LSDEDTYASLINAYC--------------AQGELF-KVLTLDDEMSHKGSLPDSVIDS 308
+S +T+ +IN C Q +F + L D M G P + +
Sbjct: 399 DLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFN 458
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYM--YTSMPNYIIYDTLIENC-SNNEFKSVVGLVK 365
I GL + R + + + D M Y +PN Y+ L++ N F+ GL++
Sbjct: 459 NFIKGLCRAGRVE-----WAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR 513
Query: 366 -------------------SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
FS G+ + + ML K D N + +C+
Sbjct: 514 ELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLG 573
Query: 407 NVHKA 411
V A
Sbjct: 574 KVKTA 578
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 38/339 (11%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ ++ T+ +IK + RV VG+ M +G+SP+ ++Y +I G C++ +A
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAIS 370
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M++ I P+ TYS++I L A + +M++ P+ + +T ++ C
Sbjct: 371 VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
F +AF + MI G P + T+N I GLC GRVE A+ +L M +
Sbjct: 431 QMSMFDQAFDLIDNMISDGC--------PPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------ 267
P+ +Y ++ G + R+A L E++ + V D VTY +M G S
Sbjct: 483 YECLPNIRTYNELLDGLFRANAFREACGLIRELEERKV-EFDCVTYNTIMYGFSFNGMHQ 541
Query: 268 ----------------DEDTYASLINAYCAQGELFKVL-TLDDEMSHKGSLPDSVIDSLL 310
D T + +NAYC G++ + LD+ + K D + +++
Sbjct: 542 QVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTII 601
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
+ G+ T++ +L ++ ++ PN ++ L+
Sbjct: 602 LWGICNWLGTEEAVVYLHEMLKRGIF---PNIATWNVLV 637
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 37/239 (15%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P +FTYN ++ LC G+V+ A +L M G PD VSY VIS C+ ++ KA
Sbjct: 174 GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA 233
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
EL ++ + V Y +LI+ C + + L +EM +G
Sbjct: 234 RELAMKFEPVV-------------------PVYNALIHGVCKECRFKEAFDLMNEMVDRG 274
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
P+ + S +I+ L + L L + M+ + C N ++
Sbjct: 275 VDPNVISYSTVISCLSDMGNVE-----LSLAVFGRMF------------VRGCRPN-VQT 316
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
L+K F +RG V +A + M+ P+ YN LI C N+ +A +++ +M
Sbjct: 317 FTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQM 375
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 87/225 (38%), Gaps = 31/225 (13%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ ++ Y ++ C M ++ ++ M G P +++ I G C A
Sbjct: 416 RPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMN 475
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACC 153
+M++ LP+ TY+ L+ L EA L +E+ D +T+ T+M+
Sbjct: 476 VLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFS 535
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT----------------------------GFSPAL 185
G + + +M+ G+ D +T F +
Sbjct: 536 FNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADI 595
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
T+ I+ G+C EEA+ L M + G+ P+ ++ +++ GF
Sbjct: 596 ITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 169/392 (43%), Gaps = 49/392 (12%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGM-AEKGLSPDALSYRYVITGFCNNRCPGK 93
++ D+ YN +I C + R E+G+ +L M EK P+ ++Y +I GFC K
Sbjct: 274 GVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNIDK 333
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMH 150
A E M+++ I P+ T ++L+ +C R+ A F EM + +T+T L+
Sbjct: 334 ARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALIS 393
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A C KA +M+ G PD + Y +I GL GR+ +A ++
Sbjct: 394 AFCGVNNIDKAMQYFDEMLSSGCSPDAIV--------YYCLISGLTIAGRMGDASVVVSQ 445
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
+ G D Y ++ISGFC+ ++L + YE+ EM+ V D
Sbjct: 446 LKRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVK--------------PDIV 491
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +L++ G+ + +M +G P V +I+ K + + I
Sbjct: 492 TYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEA----MKI 547
Query: 331 IADYMYTSM--PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+ TSM PN +IY+ LI+ C NN+ + V L+ ++G+
Sbjct: 548 FGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGV--------------- 592
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+P+ YN + + +HKA+ + MV
Sbjct: 593 -QPNTTTYNAIFKGVQDKRMLHKAFELMDRMV 623
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 129/322 (40%), Gaps = 61/322 (18%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N E IQ ++ T N ++ C + RV V M KGL +A++Y +I+ FC
Sbjct: 342 NEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNI 401
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQAL------------------------------- 120
KA ++ EM G PDA Y LI L
Sbjct: 402 DKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVL 461
Query: 121 ----CSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
C K++L Y + EM PD +T+ TL+ G+F+ A + +MI +G+
Sbjct: 462 ISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGL 521
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-SPDAVSYIIVISGFCQ 232
P++ TY A+IH C ++EA+ I M + P+ V Y I+I C+
Sbjct: 522 --------KPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCK 573
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
N ++ +A L +M K V + TY + +G+ D+ L K L
Sbjct: 574 NNDVERAVSLMDDMKVKGVQP-NTTTYNAIFKGVQDKRM-------------LHKAFELM 619
Query: 293 DEMSHKGSLPDSVIDSLLINGL 314
D M PD V +L L
Sbjct: 620 DRMVEDACNPDYVTMEILTEWL 641
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 174/419 (41%), Gaps = 52/419 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGI---LRGMAEK----GLSPDALSYRYVITGFCN- 87
I + T+ +I Q C +R+++ +G+ LRG + G+ PD + Y +I G C
Sbjct: 233 IHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGREKKWIGVEPDVVLYNTLINGLCKV 292
Query: 88 NRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF---QEMLSPPDDIT 144
R + +K P+ TY+ LI C + +A LF E P+ +T
Sbjct: 293 GREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVT 352
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
TL+ C G A ++M KG+ + VT Y A+I C + +++A
Sbjct: 353 LNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVT--------YTALISAFCGVNNIDKA 404
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+ M G SPDA+ Y +ISG + A + V ++ +GLD Y L+
Sbjct: 405 MQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDA-SVVVSQLKRAGFGLDRHCYNVLIS 463
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
G +C + +L +V + +EM G PD V + L++ L K
Sbjct: 464 G-------------FCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATAT 510
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
+ +I + + P+ + Y +I ++ ++ ++EA + M
Sbjct: 511 KVMKKMIKEGL---KPSVVTYGAVIH---------------AYCLKKNIDEAMKIFGEMC 552
Query: 385 EGN-YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
+ P+ +YN+LI C+ +V +A ++ +M G + + A+ ++D M
Sbjct: 553 STSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAIFKGVQDKRM 611
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 172/411 (41%), Gaps = 45/411 (10%)
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
E+ VG++ + E G+ PD +I+ C NR G A+E + + G +A + ++L
Sbjct: 149 EEIVGLVTKLCEYGVFPDTFKLTQLISKLCGNRKNGVAWELLHAVIKLGGTVEAASCNAL 208
Query: 117 IQALCSKR---RLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
+ L +R +++E +EM P ITF L++ C +A + ++ KG
Sbjct: 209 LTGLGRERDIHKMNELLAEMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGR 268
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP-EMGLSPDAVSYIIVISGFCQ 232
++ G P + YN +I+GLC +GR EE L +L M E P+ ++Y +I GFC+
Sbjct: 269 EKKWI-GVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCK 327
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----------------------SDED 270
+ KA EL M+ + + + VT L+ G+ +
Sbjct: 328 AGNIDKARELFGLMNEEQIQP-NVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAV 386
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA----- 325
TY +LI+A+C + K + DEM G PD+++ LI+GL R D
Sbjct: 387 TYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQL 446
Query: 326 ---------HLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV---GLVKSFSMRGLV 373
H ++ +Y+ L E N +V LV G
Sbjct: 447 KRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDF 506
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
A + M++ KP Y +I +C + N+ +A ++ EM V
Sbjct: 507 ATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMV 557
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D YN +I C +++E+ +L M E G+ PD ++Y +++ GKA +F
Sbjct: 454 DRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYL------GKAGDFA 507
Query: 99 L------EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTL 148
+M ++G+ P TY ++I A C K+ + EA +F EM S PP+ + + L
Sbjct: 508 TATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNIL 567
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ A C + +A + M KGV P+ TYNAI G+ + +A ++
Sbjct: 568 IDALCKNNDVERAVSLMDDMKVKGVQPN--------TTTYNAIFKGVQDKRMLHKAFELM 619
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
M E +PD V+ I+ E+ K
Sbjct: 620 DRMVEDACNPDYVTMEILTEWLSAIGEIEK 649
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 47/271 (17%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M+ +GI PD T + LI C +++ A+ LF ++L P+ IT TTL+ A CL G+
Sbjct: 1 MEFQGIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGD 60
Query: 158 FSKAFHMHHQMIHKGV------LPDF-----------------VTGFSPALFTYNAIIHG 194
KA H H +++ V + +F + G P + TY+A++ G
Sbjct: 61 VQKALHFHENIVNPDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDG 120
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK----- 249
C L V +A M +G++ D +Y IVI+GFC+++ + +A +L EM K
Sbjct: 121 YCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPT 180
Query: 250 ------VVWGL---DEVTYAYL-------MQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
V+ GL ++YA+ M +DE TY S ++ +C +L K + L
Sbjct: 181 IVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAIALVK 240
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
E+ ++G D S+LI+GL K R KD +
Sbjct: 241 EIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQ 271
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ ++ TY+ ++ +CL+ V K M G++ D +Y VI GFC ++ +
Sbjct: 105 QGMKPNVVTYSALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDE 164
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A + EM K I+P TY+++I LC R+S A+ L +EM P D+IT+ + +H
Sbjct: 165 ALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLH 224
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + KA + ++ ++G+ D L+T + +I GL GR+++A I +
Sbjct: 225 TFCKNHQLDKAIALVKEIHNQGIQVD--------LYTCSMLIDGLSKGGRLKDAQQIFKD 276
Query: 211 MPEMGLSPDAVSYIIVISGFC 231
+ G + D V+Y +ISG C
Sbjct: 277 LLIKGYNVDVVTYKYMISGLC 297
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 12/234 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D+ T+N I + CL +++ IL M +G+ P+ ++Y ++ G+C KA
Sbjct: 72 VNPDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDGYCLLNGVNKAK 131
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
M G+ D Y+ +I C + + EA LF+EM S P +T+ T++
Sbjct: 132 HTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGL 191
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C G S A+ + +M G D + TYN+ +H C ++++A+ +++ +
Sbjct: 192 CKSGRISYAWKLVREMRDMGQPADEI--------TYNSFLHTFCKNHQLDKAIALVKEIH 243
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
G+ D + ++I G + L+ A ++ ++ K + +D VTY Y++ GL
Sbjct: 244 NQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLLIK-GYNVDVVTYKYMISGL 296
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S++I + TYN +I C R+ ++R M + G D ++Y + FC N
Sbjct: 174 SKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLD 233
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
KA E+ +GI D +T S LI L RL +A +F+++L D +T+ ++
Sbjct: 234 KAIALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYMI 293
Query: 150 HACC 153
C
Sbjct: 294 SGLC 297
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 159/342 (46%), Gaps = 29/342 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
QDL ++N I+ C +RVE + + + + D++SY + G+C + A +
Sbjct: 167 HQDLNSFNTILDVLCKTKRVEMANNLFKTLRGR-FKCDSVSYNIMANGWCLIKRTPMALQ 225
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACC 153
EM ++G+ P TY++L++ +L+EA+ F EM D +T+TT++H
Sbjct: 226 VLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFG 285
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+ GE ++ + M+ +G++P ++ TYNA+I LC V+ AL + M
Sbjct: 286 VAGEVKRSKRVFDAMVKEGLVP--------SVATYNALIQVLCKKDSVQNALLVFDEMVG 337
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G P+ +Y +VI G C + E+ + E M+ + TY
Sbjct: 338 KGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGC--------------MPSVQTYN 383
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+I YC +GEL K L L ++M + LP+ ++LI+ + + +++D L+I
Sbjct: 384 VVIRYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEM 443
Query: 334 YMYTSMPNYIIYDTLIEN---CSNNEFKSVVGLVKSFSMRGL 372
+P ++ ++ N EF + + ++S S R L
Sbjct: 444 VGRGFLPRKFTFNRVLNGLVLTGNREFANEILRMQSRSGRVL 485
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 149/367 (40%), Gaps = 50/367 (13%)
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
L+ RY G + KA + L M + G D ++++++ LC +R+ A +LF+
Sbjct: 141 LAERYATGGKAH-----KAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNLFKT 195
Query: 136 MLS--PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
+ D +++ + + CL A + +M+ +GV P + TYN ++
Sbjct: 196 LRGRFKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGV--------DPTMVTYNTLLK 247
Query: 194 GLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG 253
G G++ EA M + D V+Y ++ GF E++++ K D V G
Sbjct: 248 GYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRS---KRVFDAMVKEG 304
Query: 254 LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
L + TY +LI C + + L + DEM KG +P+ +++I G
Sbjct: 305 L-----------VPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRG 353
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L + + + + MP+ Y+ +I + + G +
Sbjct: 354 LCHSGEIERGVEFMKRMEEN---GCMPSVQTYNVVI---------------RYYCDEGEL 395
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLI---FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSV 430
+ + M G P+ YN+LI F + ++ A + +EMV GF+ F+
Sbjct: 396 EKGLELFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGFLPRKFTF 455
Query: 431 LALLTAL 437
+L L
Sbjct: 456 NRVLNGL 462
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
E + +ATYN +I+ C V+ + + M KG P+ +Y VI G C++
Sbjct: 302 KEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIE 361
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+ EF M++ G +P TY+ +I+ C + L + LF++M + P+ T+ L+
Sbjct: 362 RGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILI 421
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
A F + + K ++ GF P FT+N +++GL G E A ILR
Sbjct: 422 SAM-----FVRKKSEDLVLAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTGNREFANEILR 476
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 167/386 (43%), Gaps = 50/386 (12%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M G+ PDA SY +++ C G A + +M+ G + TY++L++ LC +
Sbjct: 4 MVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGK 63
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L+++ + ++ P+ +T++ L+ A E +A + +I KG P+ V
Sbjct: 64 LNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLV---- 119
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+YN ++ GLC GR E+A+ + + +PE G P VS+ I++ C +AYEL
Sbjct: 120 ----SYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYEL 175
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
MDR VTY L+ LS I+ Q FKVL DEM+ G
Sbjct: 176 MAGMDRD-GQAPSVVTYNVLITSLS--------IDGRIEQA--FKVL---DEMTKSGFKV 221
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
+ + +I L K+ R L++ D M N F G
Sbjct: 222 SANSYNPIIARLCKEGRV-----DLVVQCLDQMI-----------------NRRFHLNGG 259
Query: 363 LVKSFSM---RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ ++ RG+V EA + + + P Y +I CR+ N + A+ + EM
Sbjct: 260 TYNAIALLCERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMT 319
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNE 445
+GF ++ +L+ + GM +E
Sbjct: 320 VHGFTPDSYTYSSLIRGMCREGMLDE 345
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 30/351 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ +L +YN ++ C R E + + + + EKG P +S+ ++ C +AYE
Sbjct: 115 KPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYE 174
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACC 153
MD+ G P TY+ LI +L R+ +A+ + EM + ++ ++ C
Sbjct: 175 LMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLC 234
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
EG QMI++ F TYNAI LC G V+EA IL + +
Sbjct: 235 KEGRVDLVVQCLDQMINR--------RFHLNGGTYNAIAL-LCERGMVKEAFLILERLGK 285
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
P + Y VI+ C+ A+++ EM V G +Y TY+
Sbjct: 286 KQNYPISDFYKNVITLLCRKGNTYPAFQILYEM---TVHGFTPDSY-----------TYS 331
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
SLI C +G L + L + + G +P + LI GL K R D + ++ +
Sbjct: 332 SLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRI-DMSIEIFQMMVN 390
Query: 334 YMYTSMPNYIIYDTLIENCS-NNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
MPN + Y+ L+E + E + L+ ++G+++++ +M
Sbjct: 391 --KGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQSTVERLSM 439
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 32/246 (13%)
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M G+ PDA SY +++ C+ + A +L +M+ + + VTY L++GL
Sbjct: 4 MVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANG-FPTNTVTYNTLVKGL---- 58
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
C G+L + + + D + KG +P+ V S+LI K+ + L I
Sbjct: 59 ---------CMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDI 109
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
IA PN + Y+ L+ GL K G +A + + E +KP
Sbjct: 110 IAK---GGKPNLVSYNVLL-----------TGLCK----EGRTEDAIKLFKELPEKGFKP 151
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+N+L+ C +AY + M R G + + L+T+L G + V+
Sbjct: 152 CVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVL 211
Query: 451 QNTLRS 456
+S
Sbjct: 212 DEMTKS 217
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 172/400 (43%), Gaps = 49/400 (12%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY++ I C ++ +LR M + G+ PD ++ + C A + M
Sbjct: 82 TYSRFITALCSVKNFLLIESLLRDMDDLGIVPDIWAFNIYLNILCRENRLETALQLFQTM 141
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
KG PD +Y+ +I ALC +R E H++++++ PD L+ C G
Sbjct: 142 PLKGRKPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYV 201
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A+ + +I GV YNA+IHG +G+ ++A I M + G +P
Sbjct: 202 DLAYELVVGVISGGV--------EVNCLVYNALIHGFYKMGKKDKAEAIRGFMSKNGCAP 253
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDR-------------KVVWGLDEVTYAYL--- 262
D V+Y I+++ C + +A L M+R K +V AYL
Sbjct: 254 DLVTYNILLNYGCDEVTVDEAERLVETMERSGMADLYSYNELLKAFCKAYQVDRAYLYMV 313
Query: 263 --MQ--GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
MQ G+ D +Y ++I A+C + L +EM KG PD V ++LI +K
Sbjct: 314 NKMQSKGVCDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKG 373
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
+ A+ LL+ M +P+ I Y T+++ ++ KS G +++A
Sbjct: 374 GS--NVANKLLVEMKAMRI-VPDVIFYTTVVD----HQCKS-----------GNIDKAYG 415
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
M+E PD YN +I C+ V A+ +Y EM
Sbjct: 416 VFCDMVENGVSPDVVSYNAIINGFCKASRVMGAWRLYEEM 455
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 28/286 (9%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
DL TYN ++ C V++ ++ M G++ D SY ++ FC +AY +
Sbjct: 254 DLVTYNILLNYGCDEVTVDEAERLVETMERSGMA-DLYSYNELLKAFCKAYQVDRAYLYM 312
Query: 99 L-EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCL 154
+ +M KG+ DA +Y+++I A C RR AY L++EM PD +TFT L+ A
Sbjct: 313 VNKMQSKGVC-DAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLR 371
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
+G + A + +M ++PD + Y ++ C G +++A G+ M E
Sbjct: 372 KGGSNVANKLLVEMKAMRIVPDVIF--------YTTVVDHQCKSGNIDKAYGVFCDMVEN 423
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G+SPD VSY +I+GFC+ + A+ L EM K GLD DE T+
Sbjct: 424 GVSPDVVSYNAIINGFCKASRVMGAWRLYEEMQVK---GLD-----------PDEVTFNL 469
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
++ ++ + + D+M KG + + ++L+N + + T
Sbjct: 470 IVGVLIQGNKISEAYRVWDQMMEKGFTLNGDLSNILVNAVQSRDGT 515
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 170/392 (43%), Gaps = 61/392 (15%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ +Y II C ++R ++ V + R + + GL PD ++ G C+ AYE
Sbjct: 147 KPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYVDLAYE 206
Query: 97 FKLEMDQKGILPDAFTYSSLIQAL--CSKRRLSEAYHLFQEMLS-PPDDITFTTLMHACC 153
+ + G+ + Y++LI K+ +EA F PD +T+ L++ C
Sbjct: 207 LVVGVISGGVEVNCLVYNALIHGFYKMGKKDKAEAIRGFMSKNGCAPDLVTYNILLNYGC 266
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA-LGILRGMP 212
E +A + M G+ L++YN ++ C +V+ A L ++ M
Sbjct: 267 DEVTVDEAERLVETMERSGM---------ADLYSYNELLKAFCKAYQVDRAYLYMVNKMQ 317
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY-----AYLMQG-- 265
G+ DAVSY +I FC+ R +AYEL EM RK + D VT+ A+L +G
Sbjct: 318 SKGVC-DAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQP-DVVTFTVLIKAFLRKGGS 375
Query: 266 ---------------LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
+ D Y ++++ C G + K + +M G PD V + +
Sbjct: 376 NVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAI 435
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTL-IENCSNNE--FKSVVGLVKSF 367
ING K +R M + +Y+ + ++ +E F +VG++
Sbjct: 436 INGFCKASRV------------------MGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQG 477
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
+ ++EA R D M+E + +G + N+L+
Sbjct: 478 NK---ISEAYRVWDQMMEKGFTLNGDLSNILV 506
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 128/338 (37%), Gaps = 46/338 (13%)
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQ 167
FTYS I ALCS + L ++M PD F ++ C E A +
Sbjct: 81 FTYSRFITALCSVKNFLLIESLLRDMDDLGIVPDIWAFNIYLNILCRENRLETALQLFQT 140
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
M KG PD V+ Y II LC + R +E + + R + + GL PD ++
Sbjct: 141 MPLKGRKPDVVS--------YTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALV 192
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFK 287
G C + AYEL V V+ G EV Y +LI+ + G+ K
Sbjct: 193 VGLCSGGYVDLAYELVV----GVISGGVEVNCL----------VYNALIHGFYKMGKKDK 238
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLIN-GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYD 346
+ MS G PD V ++L+N G D+ T D L+
Sbjct: 239 AEAIRGFMSKNGCAPDLVTYNILLNYGCDEV--TVDEAERLV------------------ 278
Query: 347 TLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
+E + S L+K+F V+ A ++ D YN +I C+
Sbjct: 279 ETMERSGMADLYSYNELLKAFCKAYQVDRAYLYMVNKMQSKGVCDAVSYNTIIVAFCKVR 338
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYN 444
+AY +Y EM R G + + L+ A G N
Sbjct: 339 RTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGGSN 376
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+FT +K F + V + + I D+ Y ++ C ++K G+ M
Sbjct: 361 TFTVLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDM 420
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
E G+SPD +SY +I GFC A+ EM KG+ PD T++ ++ L ++
Sbjct: 421 VENGVSPDVVSYNAIINGFCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKI 480
Query: 127 SEAYHLFQEML 137
SEAY ++ +M+
Sbjct: 481 SEAYRVWDQMM 491
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 25/288 (8%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +YN +I C ++E+ + M ++G PD +Y +++ G +
Sbjct: 525 DGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 584
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT---LMHACCLE 155
E G++P+ +TY+ +++ C+ R+ A LF +++ ++++ L+ A
Sbjct: 585 HEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKA 644
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G F++AF + M + P +FTY++IIHG+C VEEA GI M G
Sbjct: 645 GNFTEAFKLRDAMRSSNI--------HPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEG 696
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L P+ Y +I G+C+ ++ + + EM + ++ TY +
Sbjct: 697 LMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQ--------------PNKITYTIM 742
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT 323
I+ YC G + L +EM G PD+V ++L G K+ ++T
Sbjct: 743 IDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 790
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 191/453 (42%), Gaps = 63/453 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ L TY ++ ++ ++ +L M KG SP+ + +I G+ A
Sbjct: 311 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDAL 370
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ +M KG+ P+A T+++L+Q C ++ +A + + +LS ++ + ++H
Sbjct: 371 RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL 430
Query: 153 CLEGEFS------KAFHMHHQMIHKGVLPDFV----------------------TGFSPA 184
C +F KA + + ++ +L V G +
Sbjct: 431 CKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAAN 490
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
T NA+++GLC G +EE + + M E GL D +SY +I G C++ ++ +A++LK
Sbjct: 491 TTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKE 550
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
+M K + D TY +LM+GL+D +G++ V + E G +P+
Sbjct: 551 KM-MKQGFKPDTYTYNFLMKGLAD-------------KGKMDDVGRVLHEAKDHGVVPNI 596
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLV 364
+L++ G R + + ++ + + S Y++Y+ LI
Sbjct: 597 YTYALMLEGYCNADRIDNAVSLFNKLVYNKVELS---YVVYNILI--------------- 638
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ S G EA + D M N P Y+ +I C V +A ++ EM G +
Sbjct: 639 AAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLM 698
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQNTLRSC 457
++F AL+ G ++ ++Q +C
Sbjct: 699 PNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 731
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 183/426 (42%), Gaps = 50/426 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + L + N ++ + K + M G+ D +Y I +C
Sbjct: 203 SKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKID 262
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+A L+M + G+LP+ TY++LI LC RL EA M+ P +T+ L+
Sbjct: 263 EAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILV 322
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ +F +A + +M K GFSP F +NA+I G G +++AL +
Sbjct: 323 NGLVKFEKFDEANSVLVEMYSK--------GFSPNEFVFNALIDGYSRKGNMDDALRVRD 374
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M GL P+AV++ ++ GFC+ ++ +A ++ +E V ++E +Y++ L
Sbjct: 375 DMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQV-LEYLLSNVLSVNEDACSYVLHLLCKS 433
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
+ S + ++ K L L + + DS++ +LL+ GL K + + L
Sbjct: 434 SKFDSAL-------KIVKALLLRNI-----KVNDSLL-TLLVCGLCKCGKHLEA-IDLWF 479
Query: 330 IIAD----YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLE 385
+AD T+ N ++Y C + V + K RGLV
Sbjct: 480 RLADKKGLAANTTTSNALLYGL----CERGNMEEVFPVCKEMVERGLV------------ 523
Query: 386 GNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
DG YN LIF C+ + +A+ + +M++ GF ++ L+ L D G ++
Sbjct: 524 ----LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDD 579
Query: 446 RSWVIQ 451
V+
Sbjct: 580 VGRVLH 585
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 174/407 (42%), Gaps = 69/407 (16%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N S+ +D +Y ++ C + + + I++ + + + + ++ G C +C
Sbjct: 414 NVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLC--KC- 468
Query: 92 GKAYE-----FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDI 143
GK E F+L D+KG+ + T ++L+ LC + + E + + +EM+ D I
Sbjct: 469 GKHLEAIDLWFRLA-DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGI 527
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
++ TL+ CC G+ +AF + +M+ +G F P +TYN ++ GL G++++
Sbjct: 528 SYNTLIFGCCKSGKIEEAFKLKEKMMKQG--------FKPDTYTYNFLMKGLADKGKMDD 579
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG---LDEVTYA 260
+L + G+ P+ +Y +++ G+C + A V + K+V+ L V Y
Sbjct: 580 VGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA----VSLFNKLVYNKVELSYVVYN 635
Query: 261 YLMQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHK 298
L+ S TY+S+I+ C + + + +EM ++
Sbjct: 636 ILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNE 695
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
G +P+ + LI G K + ++ L + ++ + PN I Y +I+
Sbjct: 696 GLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCI---QPNKITYTIMID-------- 744
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
+ G EA + + M+ PD Y +L +C+
Sbjct: 745 -------GYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKE 784
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 17/234 (7%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ TY +++ +C R++ V + + + + Y +I +A+
Sbjct: 592 VVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAF 651
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ + M I P FTYSS+I +C + EA +F+EM + P+ +T L+
Sbjct: 652 KLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGY 711
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C G+ + + +M + P+ +T Y +I G C +G +EA +L M
Sbjct: 712 CKLGQMDQIESILQEMTSNCIQPNKIT--------YTIMIDGYCKMGNTKEATKLLNEMI 763
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
G+SPD V+Y ++ G+C+ EL E ++ D V L+E+TY L+ L
Sbjct: 764 ANGISPDTVTYTVLQKGYCKENEL----EETLQGDTAV--PLEEITYTTLVDKL 811
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F RN E + ++ Y +I +C + ++++ IL+ M + P+ ++Y +I G+C
Sbjct: 689 FEEMRN-EGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYC 747
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFT 146
+A + EM GI PD TY+ L + C + L E L + P ++IT+T
Sbjct: 748 KMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET--LQGDTAVPLEEITYT 805
Query: 147 TLM 149
TL+
Sbjct: 806 TLV 808
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 128/317 (40%), Gaps = 56/317 (17%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
N E ++ D+ T N ++ C + RV+ V M KGL +A++Y +I+GFC
Sbjct: 264 NEEQVEPDVVTLNALVNGMCKIGRVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNI 323
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL------------------------- 126
KA ++ EM G PD Y SLI +L RR+
Sbjct: 324 VKAVQYFDEMLSSGCSPDTIVYYSLISSLTIARRMDLSQLKQVGLGLDRTCYYALLSGFR 383
Query: 127 --------SEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
SE + +E+ PD +T+ TL+ G+ + A M +MI +
Sbjct: 384 KKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEE------- 436
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-SPDAVSYIIVISGFCQNRELR 237
GF P++F Y AIIH C V EA+ I M + P+ V Y I+I C+ +
Sbjct: 437 -GFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVE 495
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
KA L +M K V + Y +++GL D+ L K L D M
Sbjct: 496 KAVSLMGDMKLKSVRP-NTTIYNVILKGLWDKRM-------------LHKAFELMDRMVE 541
Query: 298 KGSLPDSVIDSLLINGL 314
PD V +L L
Sbjct: 542 DACSPDHVTMEILTEWL 558
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 170/431 (39%), Gaps = 97/431 (22%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+LR + + G + +A S ++ G + Y+ EMD+ I P+ T+ LI LC
Sbjct: 134 LLRAVKKLGGTVEATSCNVLLRGLGSQNDIRSMYKLLAEMDEMEIRPNVLTFDILIDHLC 193
Query: 122 SKRRLSEAYHLFQEMLSP-----------------------PDDITFTTLMHACCLEGEF 158
RR EA +F ++ P+ +T+ L+ C G
Sbjct: 194 KARRTDEALGVFDKLRGTLQSWEGRRLLSLLEEMKVEKKNWPNIVTYNCLIDWLCKAGNV 253
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
K + +M + V PD V T NA+++G+C +GRV+ A+ M GL
Sbjct: 254 DKTHELFSRMNEEQVEPDVV--------TLNALVNGMCKIGRVDSAVEFFNEMKGKGLEG 305
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEM-------DRKVVWGL-DEVTYAYLMQ------ 264
+AV+Y +ISGFC + KA + EM D V + L +T A M
Sbjct: 306 NAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSLISSLTIARRMDLSQLKQ 365
Query: 265 -GLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART-- 320
GL D Y +L++ + + +L +V + ++M PD+V + L++ L K +
Sbjct: 366 VGLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSAT 425
Query: 321 -----------------------------KDTKAHLLLIIADYMYTSM--PNYIIYDTLI 349
K + I + TSM PN +IY LI
Sbjct: 426 ATKMMKEMIEEGFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILI 485
Query: 350 EN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNV 408
+ C N + V L+ ++ + +P+ +YN+++ + +
Sbjct: 486 DALCKTNNVEKAVSLMGDMKLKSV----------------RPNTTIYNVILKGLWDKRML 529
Query: 409 HKAYNMYMEMV 419
HKA+ + MV
Sbjct: 530 HKAFELMDRMV 540
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
+++E+ +L M E + PD ++Y +++ A + EM ++G P F Y
Sbjct: 386 KKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAY 445
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLSP----PDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
++I A C K+ + EA +F+EM S P+ + +T L+ A C KA + M
Sbjct: 446 GAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMK 505
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
K V P+ YN I+ GL + +A ++ M E SPD V+ I+
Sbjct: 506 LKSVRPNTTI--------YNVILKGLWDKRMLHKAFELMDRMVEDACSPDHVTMEILTEW 557
Query: 230 FCQNRELRK 238
E+ K
Sbjct: 558 LSAVGEIEK 566
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 159/389 (40%), Gaps = 78/389 (20%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC---------- 86
Q D T ++K C+ V+K + + KG D +SY +I G C
Sbjct: 42 QPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQ 101
Query: 87 -------NNRCPGK----AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
N C K AY+ EM K I PD TY++LI C +L +A LF E
Sbjct: 102 FMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNE 161
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
M P+ +F L+ C EG+ + MI + V PD VT +++I
Sbjct: 162 MRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTC--------SSLI 213
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
G + + +A I M + G++ D SY I+I+G + + + +A L EM K +
Sbjct: 214 DGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMT 273
Query: 253 GLDEVTYAYLMQGLS------------DE----------DTYASLINAYCAQGELFKVLT 290
D +TY+ L+ GL DE TY+SL+N C G +
Sbjct: 274 P-DTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIR 332
Query: 291 LDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA--HLLLI------------------ 330
+ ++ KG P+ V ++L++GL K R KD + H LLI
Sbjct: 333 IFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLC 392
Query: 331 ---IADYMYTSMPNYIIYDTLIENCSNNE 356
+ D Y PN + Y+ +I N+
Sbjct: 393 REALFDEAYGCTPNAVTYEIIIRALFKND 421
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 179/438 (40%), Gaps = 75/438 (17%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
IQ+D+ + +I + ++ +L + + G PD ++ ++ G C N K
Sbjct: 4 RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSK---------------------RRLSEAYHL 132
A F ++ KG D +Y +LI LC + + +AY L
Sbjct: 64 ALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDL 123
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
+ EM+ PD +T+ TL++ C+ G+ A + ++M K ++P+ + ++N
Sbjct: 124 YCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPN--------VCSFN 175
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+I GLC G V+ +L M + + PD V+ +I G+ ++ KA + M +
Sbjct: 176 ILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQN 235
Query: 250 VVWGLDEVTYAYLMQGLS----------------------DEDTYASLINAYCAQGELFK 287
V +D +Y ++ GLS D TY++LI+ G +
Sbjct: 236 GVT-IDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISY 294
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
V L DEM G + + S L+N L K DT + I D + PN + Y+
Sbjct: 295 VWDLIDEMRATGRSANVITYSSLLNVLCKSGHF-DTAIRIFTKIKDKGFE--PNMVTYNI 351
Query: 348 LIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
L++ C N K + HD +++G Y+ D +Y ++I CR
Sbjct: 352 LVDGLCKNGRLKDAQEIF---------------HDLLIKG-YRLDVRLYTVMINGLCREA 395
Query: 407 NVHKAYNMYMEMVRYGFV 424
+AY V Y +
Sbjct: 396 LFDEAYGCTPNAVTYEII 413
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 143/381 (37%), Gaps = 84/381 (22%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G + + +I+ L ++ A +L + ++G PD V+ ++ G C N E++KA
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGL--------------------------------- 266
++ K + LD V+Y L+ GL
Sbjct: 65 LHFHDDVIAK-GFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDL 123
Query: 267 ----------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
D TY +LI +C G+L + L +EM K +P+ ++LI+GL K
Sbjct: 124 YCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCK 183
Query: 317 KARTKDTKAHLLLIIAD---------------YMYTSMPNYI--IYDTLIENCSNNEFKS 359
+ K K+ L ++I Y N I++ + +N + +S
Sbjct: 184 EGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRS 243
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
++ S +V+EA M + PD Y+ LI + + +++ EM
Sbjct: 244 YNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMR 303
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPI 479
G +++ + +LL L G + D+ + ++ +I + F P
Sbjct: 304 ATGRSANVITYSSLLNVLCKSGHF-----------------DTAI-RIFTKIKDKGFEPN 345
Query: 480 GATLLDVLAEIAMDGLLLDGR 500
T I +DGL +GR
Sbjct: 346 MVTY-----NILVDGLCKNGR 361
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q + +Y +I C + + +LR + K + P+ + Y +I G C ++ A++
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
EM KGI P+ TYS+LI + +L +A LF +M+S PD TF L+ C
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G+ S A + +M +G P+ V TY++I+ LC RV++A+ +L + +
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIV--------TYSSILDALCKTHRVDKAVALLTKLKD 360
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ P+ +Y I+I G C + +L A + ++ +V G D Y++
Sbjct: 361 QGIRPNMHTYTILIDGLCTSGKLEDARNIFEDL---LVKGYDITVVTYIV---------- 407
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+ +C +G + L +M G +PD+ L+ L KK
Sbjct: 408 -MFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGE 452
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 160/367 (43%), Gaps = 45/367 (12%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ +L N +I C + + + + + G +P+ +++ +I G C +A
Sbjct: 118 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQAL 177
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F ++ G + +Y +LI LC A L + + L P+ + ++T++
Sbjct: 178 NFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGM 237
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + AF ++ +M+ KG+ SP + TY+A+I G +G++++A+ + M
Sbjct: 238 CKDKHVNDAFDLYSEMVSKGI--------SPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQGLSDEDT 271
+ PD ++ I++ FC++ ++ A +L EM DR + T
Sbjct: 290 SENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNI---------------VT 334
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y+S+++A C + K + L ++ +G P+ ++LI+GL + +D +
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARN------ 388
Query: 332 ADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD 391
I++ L+ + + + + F +GL +EA+ M E PD
Sbjct: 389 ------------IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPD 436
Query: 392 GAVYNLL 398
Y L+
Sbjct: 437 AKTYELI 443
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ I ++ TY+ +I + +++ V + M + + PD ++ ++ FC + G
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKS---G 311
Query: 93 K-AYEFKL--EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFT 146
K +Y KL EM +G P+ TYSS++ ALC R+ +A L ++ P+ T+T
Sbjct: 312 KISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYT 371
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
L+ C G+ A ++ ++ V G+ + TY + +G C G +EA
Sbjct: 372 ILIDGLCTSGKLEDARNIFEDLL--------VKGYDITVVTYIVMFYGFCKKGLFDEASA 423
Query: 207 ILRGMPEMGLSPDAVSYIIV 226
+L M E G PDA +Y ++
Sbjct: 424 LLSKMEENGCIPDAKTYELI 443
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/411 (18%), Positives = 162/411 (39%), Gaps = 77/411 (18%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMI 169
YSS S + +A LF +L P I F ++ + + ++ +M
Sbjct: 55 YSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKME 114
Query: 170 HKGVLPDFVT---------------------------GFSPALFTYNAIIHGLCFLGRVE 202
+G+ P+ V G++P T+ +I GLC G++
Sbjct: 115 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIH 174
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+AL + +G + +SY +I G C+ E R A +L +D K+V + V Y+ +
Sbjct: 175 QALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP-NVVMYSTI 233
Query: 263 MQGLSDED----------------------TYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+ G+ + TY++LI+ + G+L + L ++M +
Sbjct: 234 IDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIEN-CSNNEF 357
PD ++L++ K K L + D M+ PN + Y ++++ C +
Sbjct: 294 KPDVYTFNILVD-----VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
V L+ +G+ +P+ Y +LI C + A N++ +
Sbjct: 349 DKAVALLTKLKDQGI----------------RPNMHTYTILIDGLCTSGKLEDARNIFED 392
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
++ G+ + + + + G+++E S ++ + + D++ ++++
Sbjct: 393 LLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 174/403 (43%), Gaps = 51/403 (12%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
RN++ + D TYN +I C V++G G+L M ++GL D+++ ++ G+C
Sbjct: 153 RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGL 212
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTT 147
A + G+ D ++LI C +S+A L + D +T+ T
Sbjct: 213 VQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNT 272
Query: 148 LMHACCLEGEFSKAFHMHHQMI-----------HKGVLPDFVTGFSPALFTYNAIIHGLC 196
L+ A C G+ ++A + ++++ + V + + P L TY +I C
Sbjct: 273 LLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYC 332
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
VEE+ + + M G+ PD V+ ++ GFC++ +L +A L EM GLD
Sbjct: 333 KFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE---MGLD- 388
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+ +YA++IN+ G + + L +M +G D V + +++GL K
Sbjct: 389 ----------PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE---NCSNNEFKSVV------------ 361
+TK+ + I+ PN + Y L++ E +V
Sbjct: 439 VGKTKEAEEVFETILK---LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 495
Query: 362 -----GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
++ ++ +G++++A M++ N P+ VY +LI
Sbjct: 496 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 194/493 (39%), Gaps = 80/493 (16%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E + ++ T++ II + + K V +LR M ++ + P+ + Y +I G+
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A +F EM + + + L+ L R+ EA L +M S PD + + +L+
Sbjct: 550 ADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLID 609
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------------------------GFSPA 184
EG A + +M K + D V G +P
Sbjct: 610 GYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPD 669
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
TYN II+ C G+ E+AL IL M G+ P+AV+Y I+I G C+ + KA +
Sbjct: 670 CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA---ES 726
Query: 245 EMDRKVVWGL--DEVTYAYLMQGLSDED----------------------TYASLINAYC 280
+D +V +T+ +L++ S + Y +LI +C
Sbjct: 727 ALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 786
Query: 281 AQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP 340
G K + DEM +G D V + LI G + + + D + P
Sbjct: 787 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGI---AP 843
Query: 341 NYIIYDTLIENCSNNEF-----KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
N Y+TL+ SN + LV + RGLV P+ A Y
Sbjct: 844 NITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV----------------PNAATY 887
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
++L+ + R N K +++EM+ GFV + + L++ G E ++ + L
Sbjct: 888 DILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLT 947
Query: 456 SCNLNDSELHKVL 468
+ +S + +L
Sbjct: 948 KGRIPNSFTYDIL 960
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 161/358 (44%), Gaps = 60/358 (16%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D T N ++K +C + V+ ++ + + G++ D + +I G+C +A E
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-------------------- 138
+ + D TY++L++A C L+ A LF E+L
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P +T+TTL+ A C ++ ++ +MI G++PD VT ++I++G C
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTC--------SSILYGFC 367
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL-- 254
G++ EA + R M EMGL P+ VSY +I+ ++ + +A+ L+ +M VV G+
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM---VVRGISF 424
Query: 255 DEVTYAYLMQGL--------SDE--------------DTYASLINAYCAQGELFKVLTLD 292
D VT +M GL ++E TY++L++ YC G++ +
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
+M + P+ + S +ING KK L ++ MPN I+Y LI+
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR---NVMPNTIVYAILID 539
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 193/430 (44%), Gaps = 47/430 (10%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+++Q L TY +I +C VE+ + + M G+ PD ++ ++ GFC + +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMH 150
A EM + G+ P+ +Y+++I +L R+ EA++L +M+ D +T TT+M
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G+ +A + ++ + P+ V TY+A++ G C LG++E A +L+
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCV--------TYSALLDGYCKLGKMELAELVLQK 486
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + + P+ +++ +I+G+ + L KA ++ EM ++ V + +
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV--------------MPNTI 532
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
YA LI+ Y GE EM + +VI +L+N L + R + ++ LI
Sbjct: 533 VYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS---LI 589
Query: 331 IADYMYTSMPNYIIYDTLIENC--SNNEFK--SVVGLVKSFSMR-----------GLVN- 374
I Y P+ + Y +LI+ N+ S+V +K ++R GL+
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 649
Query: 375 ---EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVL 431
+ M+E PD YN +I +C + A ++ EM YG + + +
Sbjct: 650 GKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709
Query: 432 ALLTALRDHG 441
L+ L G
Sbjct: 710 ILIGGLCKTG 719
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 132/331 (39%), Gaps = 65/331 (19%)
Query: 26 RFTAARNSE-SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITG 84
R+ +R E + D TYN II +C+ + E + IL M G+ P+A++Y +I G
Sbjct: 655 RYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGG 714
Query: 85 FCNNRCPGKAYEFKLEMDQKGILPDAFT-------------------------------- 112
C KA EM +P T
Sbjct: 715 LCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELS 774
Query: 113 ---YSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHH 166
Y++LI C +A + EM+ D +T+ L+ C KA +
Sbjct: 775 LTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYS 834
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG----RVEEALGILRGMPEMGLSPDAVS 222
QM FV G +P + TYN ++ GL G +EE ++ M E GL P+A +
Sbjct: 835 QM--------FVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAAT 886
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y I++SG+ + +K L +EM +T + + TY LI+ Y
Sbjct: 887 YDILVSGYGRVGNRKKTIILHIEM----------ITKGF----VPTLKTYNVLISDYAKS 932
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
G++ + L +++ KG +P+S +L G
Sbjct: 933 GKMIEARELLNDLLTKGRIPNSFTYDILTCG 963
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 173/411 (42%), Gaps = 41/411 (9%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAY-HLFQEMLSPPDDITFTTLMHACCLEGEFSKAFH 163
G++PD F+ + L+ +LC L A +L + D++T+ T++ C +G + F
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFG 183
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSY 223
+ +M+ +G+ D +T N ++ G C +G V+ A ++ + + G++ D +
Sbjct: 184 LLSEMVKRGLCFDSITC--------NILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGL 235
Query: 224 IIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG 283
+I G+C+ + +A EL +E + +D VTY +L+ A+C G
Sbjct: 236 NTLIDGYCEAGLMSQATEL-IENSWRSDVKIDIVTYN-------------TLLKAFCKTG 281
Query: 284 ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP-NY 342
+L + +L +E+ D + ++ ++ + K + LI A + + ++
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
+Y +I N + + ++ F G + EAA M E P+ Y +I
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR------- 455
+ V +A+N+ +MV G + + ++ L G E V + L+
Sbjct: 402 FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNC 461
Query: 456 ---------SCNLNDSELHK-VLNEIDTRKFPPIGATLLDVLAEIAMDGLL 496
C L EL + VL +++ PP T ++ A G+L
Sbjct: 462 VTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGML 512
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ ++ L YN +I C + K +L M ++G+S D ++Y +I G+C
Sbjct: 768 ASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVE 827
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-------PDDITF 145
KA + +M GI P+ TY++L+ L + + E ++++S P+ T+
Sbjct: 828 KALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATY 887
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
L+ G K +H +MI K GF P L TYN +I G++ EA
Sbjct: 888 DILVSGYGRVGNRKKTIILHIEMITK--------GFVPTLKTYNVLISDYAKSGKMIEAR 939
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQ-------NRELRKAYELKV-----EMDRK 249
+L + G P++ +Y I+ G+ +R L+++YE++V EM RK
Sbjct: 940 ELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRK 995
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 33/235 (14%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TYN ++ +CL V K + + ++ ++P SY +I G C + +A EM
Sbjct: 83 TYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTEM 142
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEF 158
K P+ TY+SLI LC R+S A+ L +M P D IT+ + +HA C +
Sbjct: 143 HCK---PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKNHQV 199
Query: 159 SKAFHMHHQMIHKGVLPD---------------------------FVTGFSPALFTYNAI 191
KA + ++ +G+ P+ + G+ L+TY +
Sbjct: 200 DKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIM 259
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
I+GLC G +EA+ +L M + G P+AV+Y +I +N E KA +L EM
Sbjct: 260 INGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKNDENDKAEKLLREM 314
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 30/261 (11%)
Query: 76 LSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQE 135
++Y ++ G+C KA + ++ + P F+Y +I LC + + EA +LF E
Sbjct: 82 VTYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTE 141
Query: 136 MLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
M P+ +T+ +L+ C G S A+ + QM +G D +T YN+ +H L
Sbjct: 142 MHCKPNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVIT--------YNSFLHAL 193
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY----ELKVEMDRKVV 251
C +V++A+ +++ + + G+ P+ +Y I+I G C+ L A +L ++ + +
Sbjct: 194 CKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTL 253
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
W TY +IN C +G + +TL ++M G +P++V + +I
Sbjct: 254 W------------------TYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATII 295
Query: 312 NGLDKKARTKDTKAHLLLIIA 332
+ L K + L +IA
Sbjct: 296 HALFKNDENDKAEKLLREMIA 316
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + TYN +I C R+ +L M ++G D ++Y + C N KA
Sbjct: 145 KPNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIA 204
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLMHACC 153
++ +GI P+ TYS LI LC + RL A +FQ++L + T+T +++ C
Sbjct: 205 LVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIMINGLC 264
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
LEG F +A + +M G +P+ V TY IIH L ++A +LR M
Sbjct: 265 LEGLFDEAMTLLEKMEDNGCIPNAV--------TYATIIHALFKNDENDKAEKLLREMIA 316
Query: 214 MGL 216
GL
Sbjct: 317 RGL 319
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TYN + C +V+K + +++ + ++G+ P+ +Y +I G C A
Sbjct: 182 DVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIF 241
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
++ KG +TY+ +I LC + EA L ++M P+ +T+ T++HA
Sbjct: 242 QDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKN 301
Query: 156 GEFSKAFHMHHQMIHKGVL 174
E KA + +MI +G+L
Sbjct: 302 DENDKAEKLLREMIARGLL 320
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ IQ ++ TY+ +I C R+E I + + KG +Y +I G C +
Sbjct: 212 QGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDE 271
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G +P+A TY+++I AL +A L +EM++
Sbjct: 272 AMTLLEKMEDNGCIPNAVTYATIIHALFKNDENDKAEKLLREMIA 316
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 60/369 (16%)
Query: 13 KTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS 72
K + M+ +GV + D+ T +IK C +V G +LR + EKGL
Sbjct: 185 KLYELMIESGV-----------GVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLC 233
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
D + +I GFC + + E M P +TY +I L +R+ EA+ +
Sbjct: 234 VDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRV 293
Query: 133 FQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------- 179
F ++ PD + +TT++ C G ++A + +MI KG++P+ T
Sbjct: 294 FNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCK 353
Query: 180 -----------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
G++ + +Y+ +I GL G+ +EAL + M G++ D +S
Sbjct: 354 VRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLIS 413
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE-DTYASLINAYCA 281
Y +I G CQ EL KA L ++ L+QGL ++ LI C
Sbjct: 414 YNSLIKGLCQEGELAKATNLLNKL---------------LIQGLEPSVSSFTPLIKCLCK 458
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPN 341
G+ + L +M + P + +I GL KK LL +++ + PN
Sbjct: 459 VGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLS---WKLKPN 515
Query: 342 YIIYDTLIE 350
++ LI+
Sbjct: 516 MQTFEHLID 524
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 16/237 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y +IK C M + + + M +KGL P+ +Y +I G+C R +A +
Sbjct: 305 DRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLY 364
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
+M +G + +YS++I L + EA LF EM D I++ +L+ C E
Sbjct: 365 DDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQE 424
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
GE +KA ++ ++++ +G+ P V+ F+P +I LC +G E A+ +L+ M +
Sbjct: 425 GELAKATNLLNKLLIQGLEPS-VSSFTP-------LIKCLCKVGDTEGAMRLLKDMHDRH 476
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDED 270
L P A ++ +I G + + + E ++M + W L + T+ +L+ L E+
Sbjct: 477 LEPIASTHDYMIIGLSKKGDFAQGMEWLLKM---LSWKLKPNMQTFEHLIDCLKREN 530
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 30/284 (10%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
K YE +E G+ D T LI+A C++ ++ Y L +++L D+ F L+
Sbjct: 185 KLYELMIE-SGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALI 243
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C + ++ + + H MI +P+++TY II+GL + +EA +
Sbjct: 244 NGFCKQKQYDRVSEILHIMI--------AMKCNPSIYTYQEIINGLLKRRKNDEAFRVFN 295
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
+ + G PD V Y VI GFC L +A +L EM +K GL + +E
Sbjct: 296 DLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQK---GL-----------VPNE 341
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
TY +I YC + + L D+M +G + V S +I+GL +T + L L
Sbjct: 342 YTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEA---LSL 398
Query: 330 IIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGL 372
+ I Y++LI+ C E L+ ++GL
Sbjct: 399 FHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGL 442
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 33/288 (11%)
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
PDFV P + + L G VEE + + ++G P A S+ + + C
Sbjct: 123 PDFV----PKNDSLEGYVRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLA-C--- 174
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
LKV +VW L E+ + D +T LI A+CA+ ++F L +
Sbjct: 175 -------LKVGRT-DLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQ 226
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYI-IYDTLIENCS 353
+ KG D+ + + LING K+ + L ++IA S+ Y I + L++
Sbjct: 227 VLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRK 286
Query: 354 NNEFKSVVG----------------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
N+E V ++K F GL+ EA + M++ P+ YN+
Sbjct: 287 NDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNV 346
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
+I+ +C+ + +A +Y +M G+ ++ S +++ L HG +E
Sbjct: 347 MIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDE 394
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ + D+ TY ++ +CL+ +V K + + ++ + PD SY +I G C + +
Sbjct: 238 QGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDE 297
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML----SPPDDITFTTLM 149
A EM + P+ TYSSLI LC R+S A+ L +M P + IT+ +L+
Sbjct: 298 ALNLFKEMHCE---PNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLL 354
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV-------E 202
HA C KA + ++ +G+ P + TYN +I GLC GR+ +
Sbjct: 355 HALCKNHHVDKAIALVKKIKDQGI--------EPNMTTYNILIDGLCKEGRLRNAQGLFD 406
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
EA+ +L M + G PDAV+Y +I +N E KA +L EM
Sbjct: 407 EAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREM 450
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 22/271 (8%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I ++ T N ++ C V++ ++ M ++G+ PD ++Y ++ G+C KA
Sbjct: 204 NILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGYCLVNQVNKA 263
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCL 154
+ ++ I PD +Y+ +I LC + + EA +LF+EM P+ +T+++L+ C
Sbjct: 264 KHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMHCEPNMVTYSSLIDGLCK 323
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G S A+ + +M H G + TYN+++H LC V++A+ +++ + +
Sbjct: 324 SGRVSHAWELLDKM-HDD------RGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQ 376
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE-VTYAYLMQG---LSDED 270
G+ P+ +Y I+I G C+ LR A L DE VT M+ + D
Sbjct: 377 GIEPNMTTYNILIDGLCKEGRLRNAQGL-----------FDEAVTLLSKMEDNGCIPDAV 425
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
TY ++I A E K L EM +G L
Sbjct: 426 TYETIIRALFKNDENDKAEKLLREMIARGLL 456
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 71/381 (18%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
++PD +++ VI +C+ A+ ++ + G P+ T ++LI+ R +
Sbjct: 100 VTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKG--ETRAALQML 157
Query: 131 HLFQEMLSPPDDITFTTLMHACCLEG-----EFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
+ L D + +T ++ +AF + H+M+ +LP+ +
Sbjct: 158 RKIEGKLVNTDVVMYTAIIDMLSFMAFAWLVNSKQAFGLFHEMVLTNILPN--------V 209
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA-YELKV 244
+T N ++ LC G V++A ++ M + G+ PD V+Y ++ G+C ++ KA + +
Sbjct: 210 YTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNI 269
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
RK+ D +Y +IN C + + L L EM + P+
Sbjct: 270 LGKRKIK---------------PDVHSYTIIINGLCKIKMVDEALNLFKEMHCE---PNM 311
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMP-NYIIYDTLIEN-CSNNEFKSV 360
V S LI+GL K R + A LL D M+ P N I Y++L+ C N+
Sbjct: 312 VTYSSLIDGLCKSGRV--SHAWELL---DKMHDDRGQPVNIITYNSLLHALCKNHHVDKA 366
Query: 361 VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
+ LVK +G+ +P+ YN+LI C+ + A ++ E V
Sbjct: 367 IALVKKIKDQGI----------------EPNMTTYNILIDGLCKEGRLRNAQGLFDEAV- 409
Query: 421 YGFVSHMFSVLALLTALRDHG 441
LL+ + D+G
Sbjct: 410 -----------TLLSKMEDNG 419
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 54/309 (17%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN------------ 88
TY +I C M + + +LR + K ++ + + Y VI G C +
Sbjct: 262 VTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSE 321
Query: 89 ----RCPGKAYEFKL-----EMDQKGILPDAFTYSSLIQALCSKRRLSEA---------- 129
R P FK EM K I P+ +T++ L+ ALC ++ EA
Sbjct: 322 MIVKRIPPTVVTFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDE 381
Query: 130 -YHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+LF EM P+ +++ TL+ C G S A+ + QM +G P+ +T Y
Sbjct: 382 ALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVIT--------Y 433
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N+++H LC V++A+ ++ + G+ PD +Y ++ G C+ L+ A + ++
Sbjct: 434 NSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDL-- 491
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
++ G + T+ TY +IN C +G L + TL +M G +PD V
Sbjct: 492 -LIKGYNLPTW-----------TYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQ 539
Query: 309 LLINGLDKK 317
+I+ L +K
Sbjct: 540 TIIHALFEK 548
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 170/402 (42%), Gaps = 71/402 (17%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ + T +IK CL +V + + + G + ++Y +I G C A +
Sbjct: 223 EPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQ 282
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+++ K + + YS++I LC + + +AY L+ EM+ PP +TF
Sbjct: 283 VLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTF-------- 334
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM-- 211
KAF + H+M+ K + +P ++T+N ++ LC G+++EA ++ M
Sbjct: 335 ------KAFSLFHEMVLKNI--------NPNVYTFNILVDALCKDGKIKEAKNVIIKMVD 380
Query: 212 ------PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRKVVWGLDEVTYAYLMQ 264
EM P+ VSY +I GFC++ L A++L +M DR
Sbjct: 381 EALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRG--------------- 425
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
+ TY SL++A C + K + L + +G PD + L++GL K+ R KD +
Sbjct: 426 QPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQ 485
Query: 325 AHLLLIIADYMYT--SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
LI D + ++P + Y+ +I + GL++EA
Sbjct: 486 ----LIFQDLLIKGYNLPTW-TYNIMIN---------------GLCLEGLLDEAETLLSK 525
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
M + PD Y +I + KA + E++ G +
Sbjct: 526 MEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRGLL 567
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 118/232 (50%), Gaps = 22/232 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLS--------PDALSYRYVITGF 85
++I ++ T+N ++ C ++++ ++ M ++ L+ P+ +SY +I GF
Sbjct: 346 KNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGF 405
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDD 142
C + A++ +M +G P+ TY+SL+ ALC + +A L F++ PD
Sbjct: 406 CKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDM 465
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T+ TL+ C +G A Q+I + +L + G++ +TYN +I+GLC G ++
Sbjct: 466 HTYNTLVDGLCKQGRLKDA-----QLIFQDLL---IKGYNLPTWTYNIMINGLCLEGLLD 517
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL 254
EA +L M + G PD V+Y +I + E KA +L E+ +V GL
Sbjct: 518 EAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVREL---IVRGL 566
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 149/360 (41%), Gaps = 68/360 (18%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFS 159
+M+ KG+ PD FT S LI + +M P+ IT TTL+ CL G+ +
Sbjct: 196 QMESKGVKPDLFTLSILINC------------YYFKMGYEPNTITLTTLIKGLCLNGKVN 243
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+A H ++ GF TY +I+GLC +G+ AL +LR + ++ +
Sbjct: 244 EALLFHDHVL--------ALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTN 295
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAY 279
V Y VI G C+++ + AY L EM K + T +
Sbjct: 296 VVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRI-----------------PPTVVT----- 333
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII--ADYMYT 337
FK +L EM K P+ ++L++ L K + K+ K ++ ++ A ++T
Sbjct: 334 ------FKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFT 387
Query: 338 SM---PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
M PN + Y+TLI+ G KS G ++ A + D M + P+
Sbjct: 388 EMHCKPNTVSYNTLID-----------GFCKS----GRLSHAWKLLDQMRDRGQPPNVIT 432
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
YN L+ C+ +V KA + G M + L+ L G + + Q+ L
Sbjct: 433 YNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLL 492
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 19/292 (6%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S + D+ Y +I + L + + + + M E+G PD ++Y + GF NR
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLM 149
+A + M+ +G+ P++ T+ +I+ LCS ++ EA F + +I+ +T L+
Sbjct: 488 EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C K+ + I + + P+ Y+ I LC G +E A +
Sbjct: 548 NGYCEAALIEKSHELKEAFILLRTMLEM--NMKPSKVMYSKIFTALCCNGNMEGAHTLFN 605
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
G +PDAV+Y I+I+G+C+ L +A+EL +M + + D
Sbjct: 606 LFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGI--------------TPDA 651
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
TY +IN YC L + L +M +G PD + +++I GL T+
Sbjct: 652 VTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTE 703
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 166/403 (41%), Gaps = 37/403 (9%)
Query: 24 VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT 83
V R + D Y I+ C R + G +L+ + +Y VI
Sbjct: 244 VVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIR 303
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PP 140
GFCN +A LEM+++G++PD + Y +L+ C+ R +A +++ M+S
Sbjct: 304 GFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKT 363
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
+ + F+ ++H G + M + G+ D YN + LC LG+
Sbjct: 364 NCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRK--------AYNILFDALCKLGK 415
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
V++A+G+L + M L D Y +I+G+ + +A L EM+ + + D V Y
Sbjct: 416 VDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEER-GFKPDVVAYN 474
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
L G T F+ + L + M +G P+S ++I GL +
Sbjct: 475 VLAAGFFRNRTD-------------FEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKV 521
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
++ + + + + S+ IY L+ N + + KS ++ EA
Sbjct: 522 EEAEEFFNWLKGESVEISVE---IYTALV-----NGYCEAALIEKSHELK----EAFILL 569
Query: 381 DTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
TMLE N KP +Y+ + C N+ A+ ++ + GF
Sbjct: 570 RTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGF 612
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 33/285 (11%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D YN + C + +V+ VG+L + L D Y +I G+ P +A
Sbjct: 399 DRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLF 458
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM+++G PD Y+ L R EA L M S P+ T ++ C
Sbjct: 459 KEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSA 518
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE------EALGILR 209
G+ +A + + + V ++ Y A+++G C +E EA +LR
Sbjct: 519 GKVEEAEEFFNWLKGESV--------EISVEIYTALVNGYCEAALIEKSHELKEAFILLR 570
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-D 268
M EM + P V Y + + C N + A+ L + L ++ G + D
Sbjct: 571 TMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTL---------FNL------FIHTGFTPD 615
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
TY +IN YC L + L +M +G PD+V +++ING
Sbjct: 616 AVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMING 660
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y+KI C +E + G +PDA++Y +I G+C C +A+E +M
Sbjct: 584 YSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMK 643
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFS 159
++GI PDA TY+ +I C L EA+ LF++M PD I +T ++ G
Sbjct: 644 ERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTE 703
Query: 160 KAFHMHHQMIHKGVLP 175
AF ++++MI G+ P
Sbjct: 704 IAFQLYNEMIDMGMTP 719
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TY +I +C + + + + M E+G++PDA++Y +I G+C C +A+E
Sbjct: 615 DAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
+M ++GI PD Y+ +I+ L + A+ L+ EM+
Sbjct: 675 KDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMI 713
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 38/251 (15%)
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+TY +I LC G E + + M E G+ D+ Y I G C+N Y + +
Sbjct: 226 YTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQD 285
Query: 246 MDRK-----------VVWG------LDEVTYAYL---MQGL-SDEDTYASLINAYCAQGE 284
+ V+ G LDE +L QGL D Y +L++ YC
Sbjct: 286 YRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRN 345
Query: 285 LFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART----------------KDTKAHLL 328
K L + M +G + VI S +++ LD+ R D KA+ +
Sbjct: 346 FDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNI 405
Query: 329 LIIADYMYTSMPNYI-IYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
L A + + + + D L + + K L+ + ++G EA M E
Sbjct: 406 LFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERG 465
Query: 388 YKPDGAVYNLL 398
+KPD YN+L
Sbjct: 466 FKPDVVAYNVL 476
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 139/353 (39%), Gaps = 50/353 (14%)
Query: 91 PGKAYEFKLEM-DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLM 149
P AY + ++ +Q G + TY+S+I+ LC Y+L +++ S DI +
Sbjct: 75 PSLAYSYFTQLKNQHGFSHNIQTYTSIIRILC-------YYNLDRKLDSLFLDIIDHSKQ 127
Query: 150 HACC-LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
C + F F + + L + GF A + N + + FL + + + IL
Sbjct: 128 DPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVIL 187
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
P+ +S+ +I+ ++ E+ A L V R +GL + +
Sbjct: 188 ---------PNILSFNFLINRLVKHDEVDMALCLFV---RFKSFGL-----------IFN 224
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
E TY +I A C +G+ V+ + DEM G DS + I GL K R+
Sbjct: 225 EYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRS-------- 276
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
D Y + +Y + + + +++ F ++EA M +
Sbjct: 277 ----DLGYAVLQDYRTRNAHVHK------YAYTAVIRGFCNETKLDEAESVFLEMEKQGL 326
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
PD VY L+ +C N KA +Y M+ G ++ +L L + G
Sbjct: 327 VPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMG 379
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 188/474 (39%), Gaps = 88/474 (18%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
SF L F + +F A + ++ + TYN ++K C K ++ M
Sbjct: 119 SFNTLLNAFAESHQWDRAEKFFAYFETAGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWM 178
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPD----------------- 109
G+ PD +Y +I F R A E EM ++G+ PD
Sbjct: 179 WSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDF 238
Query: 110 -------------------AFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTT 147
+Y+ +I LC R E+ +++ M D T++
Sbjct: 239 VKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSA 298
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
L+H C G+ A ++ +M+ +GV D V T NA+++GLC G+V+E+ +
Sbjct: 299 LIHGLCEGGDLDGARKVYEEMVLRGVKADVV--------TCNAMLNGLCKAGKVDESFEL 350
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQN---RELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
M G S + VSY + + G +N E+ +E+ EMD V + TY L+
Sbjct: 351 WEEMGNCG-SRNVVSYNVFLKGLFENGKVDEVINVWEVLREMDCDV----ESTTYGILVH 405
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
GL C G + K L + + +G D+ S +INGL ++ R +
Sbjct: 406 GL-------------CKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDE-- 450
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
A +L + D + N +Y+ LI+ NN+ S V + + S G
Sbjct: 451 AAKVLNLMDKRGCKL-NAHVYNALIDGFMKNNKVDSAVQVFREMSTNGC----------- 498
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
P+ YN++I CR +AY+ EM+ G+ + + L+ L
Sbjct: 499 -----SPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGL 547
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 33/315 (10%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TY ++ C V K + +L G ++G DA +Y +I G C +A +
Sbjct: 398 TTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNL 457
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
MD++G +A Y++LI ++ A +F+EM + P+ +T+ +++ C
Sbjct: 458 MDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAER 517
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE---ALGILRGMPEM 214
F +A+H +M+ KG PD L TY+ +I GLC G++ E AL +
Sbjct: 518 FPEAYHCVEEMLEKGWKPD--------LITYSTLIDGLC-QGKMNENDTALRLCYQFLAK 568
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G PD + IVI C + +++ A +L M ++ L VT+ +M+G
Sbjct: 569 GFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANL--VTHNTIMEG--------- 617
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
+ G+ K + ++S G PD + ++ +NGL R D L + +
Sbjct: 618 ----FYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNG 673
Query: 335 MYTSMPNYIIYDTLI 349
+ MP I ++ L+
Sbjct: 674 V---MPTVITWNILV 685
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 163/390 (41%), Gaps = 46/390 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E++ + +YN +I C R ++ + I M DA +Y +I G C
Sbjct: 252 ETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDG 311
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLMHA 151
A + EM +G+ D T ++++ LC ++ E++ L++EM + +++ +
Sbjct: 312 ARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVFLKG 371
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
G+ + ++ VL + TY ++HGLC G V +AL +L G
Sbjct: 372 LFENGKVDEVINVWE------VLREMDCDVEST--TYGILVHGLCKNGYVTKALRVLEGA 423
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
+ G DA +Y +I+G C+ L +A ++ MD++ L+ Y L+ G +
Sbjct: 424 DDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGC-KLNAHVYNALIDGFMKNNK 482
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
S + + EMS G P+ V +++ING + R + H + +
Sbjct: 483 VDSAVQVF-------------REMSTNGCSPNVVTYNIVINGFCRAERFPEA-YHCVEEM 528
Query: 332 ADYMYTSMPNYIIYDTLIEN-CSN--NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+ + P+ I Y TLI+ C NE + + L F +G +
Sbjct: 529 LEKGWK--PDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKG----------------F 570
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
KPD ++N++I C V A +Y M
Sbjct: 571 KPDITMHNIVIHRLCSSGKVQYALQLYWMM 600
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y+ +I C R+++ +L M ++G +A Y +I GF N A +
Sbjct: 431 DAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVF 490
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM G P+ TY+ +I C R EAYH +EML PD IT++TL+ C +
Sbjct: 491 REMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLC-Q 549
Query: 156 GEFSK---AFHMHHQMIHKGVLPDFV--------------TGFSPALF------------ 186
G+ ++ A + +Q + KG PD ++ L+
Sbjct: 550 GKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANLV 609
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
T+N I+ G +G E+A I + E GL PD +SY I ++G C
Sbjct: 610 THNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLC 654
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 188/474 (39%), Gaps = 88/474 (18%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
SF L F + +F A + ++ + TYN ++K C K ++ M
Sbjct: 119 SFNTLLNAFAESHQWDRAEKFFAYFETAGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWM 178
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPD----------------- 109
G+ PD +Y +I F R A E EM ++G+ PD
Sbjct: 179 WSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDF 238
Query: 110 -------------------AFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTT 147
+Y+ +I LC R E+ +++ M D T++
Sbjct: 239 VKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSA 298
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
L+H C G+ A ++ +M+ +GV D V T NA+++GLC G+V+E+ +
Sbjct: 299 LIHGLCEGGDLDGARKVYEEMVLRGVKADVV--------TCNAMLNGLCKAGKVDESFEL 350
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQN---RELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
M G S + VSY + + G +N E+ +E+ EMD V + TY L+
Sbjct: 351 WEEMGNCG-SRNVVSYNVFLKGLFENGKVDEVINVWEVLREMDCDV----ESTTYGILVH 405
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
GL C G + K L + + +G D+ S +INGL ++ R +
Sbjct: 406 GL-------------CKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDE-- 450
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
A +L + D + N +Y+ LI+ NN+ S V + + S G
Sbjct: 451 AAKVLNLMDKRGCKL-NAHVYNALIDGFMKNNKVDSAVQVFREMSTNGC----------- 498
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
P+ YN++I CR +AY+ EM+ G+ + + L+ L
Sbjct: 499 -----SPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGL 547
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 33/315 (10%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TY ++ C V K + +L G ++G DA +Y +I G C +A +
Sbjct: 398 TTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNL 457
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
MD++G +A Y++LI ++ A +F+EM + P+ +T+ +++ C
Sbjct: 458 MDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAER 517
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE---ALGILRGMPEM 214
F +A+H +M+ KG PD L TY+ +I GLC G++ E AL +
Sbjct: 518 FPEAYHCVEEMLEKGWKPD--------LITYSTLIDGLC-QGKMNENDTALRLCYQFLAK 568
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
G PD + IVI C + +++ A +L M ++ L VT+ +M+G
Sbjct: 569 GFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANL--VTHNTIMEG--------- 617
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
+ G+ K + ++S G PD + ++ +NGL R D L + +
Sbjct: 618 ----FYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNG 673
Query: 335 MYTSMPNYIIYDTLI 349
+ MP I ++ L+
Sbjct: 674 V---MPTVITWNILV 685
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 163/390 (41%), Gaps = 46/390 (11%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E++ + +YN +I C R ++ + I M DA +Y +I G C
Sbjct: 252 ETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDG 311
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLMHA 151
A + EM +G+ D T ++++ LC ++ E++ L++EM + +++ +
Sbjct: 312 ARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVFLKG 371
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
G+ + ++ VL + TY ++HGLC G V +AL +L G
Sbjct: 372 LFENGKVDEVINVWE------VLREMDCDVEST--TYGILVHGLCKNGYVTKALRVLEGA 423
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
+ G DA +Y +I+G C+ L +A ++ MD++ L+ Y L+ G +
Sbjct: 424 DDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGC-KLNAHVYNALIDGFMKNNK 482
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
S + + EMS G P+ V +++ING + R + H + +
Sbjct: 483 VDSAVQVF-------------REMSTNGCSPNVVTYNIVINGFCRAERFPEA-YHCVEEM 528
Query: 332 ADYMYTSMPNYIIYDTLIEN-CSN--NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+ + P+ I Y TLI+ C NE + + L F +G +
Sbjct: 529 LEKGWK--PDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKG----------------F 570
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
KPD ++N++I C V A +Y M
Sbjct: 571 KPDITMHNIVIHRLCSSGKVQYALQLYWMM 600
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y+ +I C R+++ +L M ++G +A Y +I GF N A +
Sbjct: 431 DAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVF 490
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM G P+ TY+ +I C R EAYH +EML PD IT++TL+ C +
Sbjct: 491 REMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLC-Q 549
Query: 156 GEFSK---AFHMHHQMIHKGVLPDFV--------------TGFSPALF------------ 186
G+ ++ A + +Q + KG PD ++ L+
Sbjct: 550 GKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANLV 609
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
T+N I+ G +G E+A I + E GL PD +SY I ++G C
Sbjct: 610 THNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLC 654
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 193/457 (42%), Gaps = 60/457 (13%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
++ + + D+ TY +I+ +C Q V++ + IL M +GL P+ ++Y +I G C +
Sbjct: 288 SKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQ 347
Query: 90 CPGKAYEFKLEMD-QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITF 145
K E +M G +PDA T+++LI + C L EA+ +F+ M D ++
Sbjct: 348 KWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASY 407
Query: 146 TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
+ L+ C +G++ KA + ++ K +L G P +Y + LC G+ ++A
Sbjct: 408 SVLIRTLCQKGDYGKAEMLFDELFEKEILLS-SYGPKPLAASYKCMFQYLCENGKTKKAE 466
Query: 206 GILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
+LR + + G + D +SY IVI G C+ Y L V M R+ D Y YL+ G
Sbjct: 467 RVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLP-DIDIYDYLIDG 524
Query: 266 LSDED----------------------TYASLINAYCAQGELFK-----VLTLDDEMSHK 298
+D T+ S++N QG + + V+ L+ +
Sbjct: 525 FLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQN 584
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK 358
+ + L GL KA + I + + +N +
Sbjct: 585 INFSTKCLQLLFDRGLQDKA-----------------------FKITELIYKNGFCVKMD 621
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
VV + + R L EA + L+ N D + N++I D C+ +A+++ E+
Sbjct: 622 EVVQFLCN-KRRAL--EACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYEL 678
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLR 455
V G + + L+ AL G E +++ + R
Sbjct: 679 VDKGLHQDLICLNDLVAALEAGGRTEEAAFISKRVPR 715
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 166/395 (42%), Gaps = 56/395 (14%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G+ PD +Y +I GFC N + + F EM PD TY++L+ LC ++ A
Sbjct: 221 GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVA 280
Query: 130 YHLFQEMLS-----PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
++L M PD +T+TTL+ C + E +A + +M +G+ P+ V
Sbjct: 281 HNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIV------ 334
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS-PDAVSYIIVISGFCQNRELRKAYELK 243
TYN +I GLC + ++ IL M G S PDA ++ +I+ C L +A+++
Sbjct: 335 --TYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVF 392
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK----- 298
M + ++ +D +Y+ LI C +G+ K L DE+ K
Sbjct: 393 ENMKK--------------LEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLS 438
Query: 299 --GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI-ENCSNN 355
G P + + L + +TK + ++ M + + Y +I +C
Sbjct: 439 SYGPKPLAASYKCMFQYLCENGKTKKAER----VLRQLMKRGTQDPLSYQIVILGHCKEG 494
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
+++ GL+ ML ++ PD +Y+ LI R+ A
Sbjct: 495 SYENGYGLLV----------------WMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETL 538
Query: 416 MEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+M++ + + ++L L + G +E + VI
Sbjct: 539 EKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVI 573
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 152/361 (42%), Gaps = 57/361 (15%)
Query: 89 RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP------DD 142
+ P KA+ F + +KG + TY +++ L ++ L+ A + + +D
Sbjct: 96 KVPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLED 155
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
F +L+ + G F ++ + M + G SP + T+N+++ L GR
Sbjct: 156 RFFNSLIRSYGEAGLFKESVKLFENMK--------LIGVSPGVVTFNSVLLVLLKRGRTN 207
Query: 203 EALGILRGMPEM-GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
A + M + G+ PD +Y I+I GFC+N + + + EM D VTY
Sbjct: 208 MAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMT-SFDCDPDVVTYNT 266
Query: 262 LMQGL------------------------SDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
L+ GL D TY +LI YC + E+ + L + +EM+
Sbjct: 267 LVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNG 326
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
+G P+ V + LI GL + + K L + D S+P+ ++TLI
Sbjct: 327 RGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGD--GGSIPDACTFNTLIN------- 377
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
S G ++EA + + M + D A Y++LI C++ + KA ++ E
Sbjct: 378 --------SHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDE 429
Query: 418 M 418
+
Sbjct: 430 L 430
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 171/384 (44%), Gaps = 44/384 (11%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
I + + E+G P ++Y ++ +C + ++++K + ++ Y+++I A
Sbjct: 96 IFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEEKQMKTNSIFYNAVINAFA 155
Query: 122 SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
+ +A Q+M P T++ L+ + G+ +A + M+ G
Sbjct: 156 ESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDG------ 209
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
P L TYN +I LC G + EA I+ MP G+ PD+V++ + G+ N E +
Sbjct: 210 -NSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAE 268
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A + +EM RK GL+ +E T+ ++N Y +G++ + L +
Sbjct: 269 AEAMILEMQRK---GLE-----------PNERTFTVIVNGYYKEGQIKEALQFVYRIKDL 314
Query: 299 GSLPDSVIDSLLING-LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
G P+ ++ ++LING +D+ R D +L ++ ++ P+ + Y T++
Sbjct: 315 GFKPNLLVFNVLINGFVDRMDR--DGVDEVLRLMKEFQI--QPDVVTYSTIMN------- 363
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
++S G ++ + D ML+ KPD Y++L+ + R + KA + +
Sbjct: 364 --------AWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGD 415
Query: 418 MVRYGFVSHMFSVLALLTALRDHG 441
M+ G ++ + +++ G
Sbjct: 416 MIESGVRPNVVTFTNVISGWGSSG 439
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 172/409 (42%), Gaps = 48/409 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE-FKLEM 101
YN +I +E ++ M E G P +Y +I G+ G+A + L +
Sbjct: 147 YNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLML 206
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
PD TY+ LI+ALC +SEA+++ +M + PD +TF T+ L E
Sbjct: 207 TDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSET 266
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
++A M +M KG+ P+ T+ I++G G+++EAL + + ++G P
Sbjct: 267 AEAEAMILEMQRKGLEPN--------ERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKP 318
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV-TYAYLMQGLSDEDTYASLIN 277
+ + + ++I+GF MDR G+DEV Q D TY++++N
Sbjct: 319 NLLVFNVLINGFVD------------RMDRD---GVDEVLRLMKEFQIQPDVVTYSTIMN 363
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
A+ G K + D M G PD S+L+ G + T+ KA LL D + +
Sbjct: 364 AWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETE--KAEELL--GDMIES 419
Query: 338 SM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYN 396
+ PN + + +I + G ++ A + D M E P+ +
Sbjct: 420 GVRPNVVTFTNVIS---------------GWGSSGRMDNAIKIFDKMCELGVSPNLRTFE 464
Query: 397 LLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
LI+ + + K+ + M + + L + A R G+ E
Sbjct: 465 ALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTFLLVSKAWRFAGLTEE 513
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 121/302 (40%), Gaps = 73/302 (24%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
DL TYN +IK C + + I+ M G+ PD++++ + G+ N +A
Sbjct: 214 DLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMI 273
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH--------------------------- 131
LEM +KG+ P+ T++ ++ + ++ EA
Sbjct: 274 LEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDR 333
Query: 132 -----------LFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD---- 176
L +E PD +T++T+M+A G K + M+ GV PD
Sbjct: 334 MDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAY 393
Query: 177 -----------------------FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G P + T+ +I G GR++ A+ I M E
Sbjct: 394 SILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCE 453
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD------RKVVWGLDEVTYAYLMQGLS 267
+G+SP+ ++ +I G+ + + K+ E+ M+ +K + L V+ A+ GL+
Sbjct: 454 LGVSPNLRTFEALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTFLL--VSKAWRFAGLT 511
Query: 268 DE 269
+E
Sbjct: 512 EE 513
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 189/445 (42%), Gaps = 63/445 (14%)
Query: 8 FTATLKTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
F + R ++R G V C+ D T+N +I C ++ + L
Sbjct: 145 FPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLE 204
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
GM+ G PDA +Y +I + P A F + +KG P TY+ L++ +C
Sbjct: 205 GMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHC 264
Query: 125 RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
S A + ++M PD + +L++ +G + + ++ G+ P+ V
Sbjct: 265 GASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVV--- 321
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
TYN +IH L G + IL+ M E +SP V+Y I+++ C++ L ++
Sbjct: 322 -----TYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSIS 376
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
L ++M + D TY +L+NA C +G + + + L +S
Sbjct: 377 LYIKMVSE--------------NCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCS 422
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIEN-CSN 354
P V +++INGL AR + K+ A MY M P+YI + TL+ C
Sbjct: 423 PGLVTYNIVINGL---ARMRSIKS------AKEMYGEMVEKGIDPDYITHRTLVWGLCQV 473
Query: 355 NEFKSVVGL----------VKSFSMRGLV---------NEAARAHDTMLEGNYKPDGAVY 395
+F+ V + +K ++ + ++ + A +A D M++ KPDG +Y
Sbjct: 474 YQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIY 533
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVR 420
L+ V++A +++ ++
Sbjct: 534 YTLLKSVANEGMVNEANDLHQRLIE 558
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 161/448 (35%), Gaps = 110/448 (24%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
R TA + M R + F + N +I+ + +V+KG I+
Sbjct: 123 RGKLTAAARLVEVMARMSQIPHFPSCTN-------------LIRGLIRIGQVDKGCKIMN 169
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
M G PD +++ VI C A EF M G LPDA TY+++I+ + K
Sbjct: 170 MMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKG 229
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD----- 176
+ A +++ L PP IT+ L+ C S+A + M +G PD
Sbjct: 230 DPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYN 289
Query: 177 ----------------------FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G P + TYN +IH L G + IL+ M E
Sbjct: 290 SLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNET 349
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
+SP V+Y I+++ C++ L ++ L ++M + D TY +
Sbjct: 350 SISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSE--------------NCSPDIVTYNT 395
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
L+NA C +G + + + L +S P V +++INGL AR + K+
Sbjct: 396 LLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGL---ARMRSIKS--------- 443
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
A + M+E PD
Sbjct: 444 -----------------------------------------AKEMYGEMVEKGIDPDYIT 462
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+ L++ C+ +A ++ M R G
Sbjct: 463 HRTLVWGLCQVYQFEEAVEIFKVMHRIG 490
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 155/388 (39%), Gaps = 66/388 (17%)
Query: 39 DLATYNKIIKQHCLMQRVEK--GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
D TYN II+ C+ + + V + KG P ++Y ++ C + +A E
Sbjct: 214 DAKTYNTIIR--CIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALE 271
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M ++G PD Y+SL+ + + + +LS P+ +T+ L+H+
Sbjct: 272 VLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLS 331
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT-----------GF----------------SPALF 186
L G + M + P VT GF SP +
Sbjct: 332 LHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIV 391
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TYN +++ LC G ++E++ +L + SP V+Y IVI+G + R ++ A E+ EM
Sbjct: 392 TYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEM 451
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
K + D +T+ L+ GL + + E+FKV M G
Sbjct: 452 VEKGI-DPDYITHRTLVWGLCQVYQFEEAV-------EIFKV------MHRIGQKIKGYA 497
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
+I GL ++ + L L++ P+ IY TL+ KS
Sbjct: 498 YKCVILGLCEQKKLDSAIQALDLMVKA---QCKPDGKIYYTLL---------------KS 539
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ G+VNEA H ++E DG +
Sbjct: 540 VANEGMVNEANDLHQRLIELKILKDGCL 567
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 189/445 (42%), Gaps = 63/445 (14%)
Query: 8 FTATLKTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
F + R ++R G V C+ D T+N +I C ++ + L
Sbjct: 145 FPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLE 204
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
GM+ G PDA +Y +I + P A F + +KG P TY+ L++ +C
Sbjct: 205 GMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHC 264
Query: 125 RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
S A + ++M PD + +L++ +G + + ++ G+ P+ V
Sbjct: 265 GASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVV--- 321
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
TYN +IH L G + IL+ M E +SP V+Y I+++ C++ L ++
Sbjct: 322 -----TYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSIS 376
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
L ++M + D TY +L+NA C +G + + + L +S
Sbjct: 377 LYIKMVSE--------------NCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCS 422
Query: 302 PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIEN-CSN 354
P V +++INGL AR + K+ A MY M P+YI + TL+ C
Sbjct: 423 PGLVTYNIVINGL---ARMRSIKS------AKEMYGEMVEKGIDPDYITHRTLVWGLCQV 473
Query: 355 NEFKSVVGL----------VKSFSMRGLV---------NEAARAHDTMLEGNYKPDGAVY 395
+F+ V + +K ++ + ++ + A +A D M++ KPDG +Y
Sbjct: 474 YQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIY 533
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVR 420
L+ V++A +++ ++
Sbjct: 534 YTLLKSVANEGMVNEANDLHQRLIE 558
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 161/448 (35%), Gaps = 110/448 (24%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILR 64
R TA + M R + F + N +I+ + +V+KG I+
Sbjct: 123 RGKLTAAARLVEVMARMSQIPHFPSCTN-------------LIRGLIRIGQVDKGCKIMN 169
Query: 65 GMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR 124
M G PD +++ VI C A EF M G LPDA TY+++I+ + K
Sbjct: 170 MMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKG 229
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD----- 176
+ A +++ L PP IT+ L+ C S+A + M +G PD
Sbjct: 230 DPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYN 289
Query: 177 ----------------------FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G P + TYN +IH L G + IL+ M E
Sbjct: 290 SLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNET 349
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
+SP V+Y I+++ C++ L ++ L ++M + D TY +
Sbjct: 350 SISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSE--------------NCSPDIVTYNT 395
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADY 334
L+NA C +G + + + L +S P V +++INGL AR + K+
Sbjct: 396 LLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGL---ARMRSIKS--------- 443
Query: 335 MYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAV 394
A + M+E PD
Sbjct: 444 -----------------------------------------AKEMYGEMVEKGIDPDYIT 462
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+ L++ C+ +A ++ M R G
Sbjct: 463 HRTLVWGLCQVYQFEEAVEIFKVMHRIG 490
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 155/388 (39%), Gaps = 66/388 (17%)
Query: 39 DLATYNKIIKQHCLMQRVEK--GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
D TYN II+ C+ + + V + KG P ++Y ++ C + +A E
Sbjct: 214 DAKTYNTIIR--CIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALE 271
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
+M ++G PD Y+SL+ + + + +LS P+ +T+ L+H+
Sbjct: 272 VLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLS 331
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT-----------GF----------------SPALF 186
L G + M + P VT GF SP +
Sbjct: 332 LHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIV 391
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TYN +++ LC G ++E++ +L + SP V+Y IVI+G + R ++ A E+ EM
Sbjct: 392 TYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEM 451
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
K + D +T+ L+ GL + + E+FKV M G
Sbjct: 452 VEKGI-DPDYITHRTLVWGLCQVYQFEEAV-------EIFKV------MHRIGQKIKGYA 497
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKS 366
+I GL ++ + L L++ P+ IY TL+ KS
Sbjct: 498 YKCVILGLCEQKKLDSAIQALDLMVKA---QCKPDGKIYYTLL---------------KS 539
Query: 367 FSMRGLVNEAARAHDTMLEGNYKPDGAV 394
+ G+VNEA H ++E DG +
Sbjct: 540 VANEGMVNEANDLHQRLIELKILKDGCL 567
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 23/302 (7%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D T IK CL ++ + + + G D +SY +I G +A E
Sbjct: 42 EPDTITLTTFIKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALE 101
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
+D K + +A Y+++I +C + +++A+ L+ EM++ P +T++ L+ C
Sbjct: 102 LLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFC 161
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFV-TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
+ G+ A + K V + P +FTYN+++ G C + V +A I M
Sbjct: 162 IVGKLKDAIGRVKEA--KNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMA 219
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWGLDEVTYAYLMQGLSDEDT 271
+ G++PD SY I+I+GFC+++ +A L EM RK++ D T
Sbjct: 220 QGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLI---------------PDVVT 264
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
Y SLI+ C G+ L L DEM +G P+ + S ++N L K + D LL I
Sbjct: 265 YNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSILNALCKNHQV-DKAITLLTKI 323
Query: 332 AD 333
D
Sbjct: 324 KD 325
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 26 RFTAARN------SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R A+N + I+ ++ TYN ++ +CL++ V K I MA+ G++PD SY
Sbjct: 172 RVKEAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYN 231
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-- 137
+I GFC ++ +A EM + ++PD TY+SLI LC + S A L EM
Sbjct: 232 ILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDR 291
Query: 138 -SPPDDITFTTLMHACC--------------LEGEFSKAF-HMHHQMIHKGVLPD 176
PP+ IT++++++A C ++ EFS+ F H H ++ G + D
Sbjct: 292 GQPPNIITYSSILNALCKNHQVDKAITLLTKIKDEFSQIFVHTQHLLMDYGKMED 346
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 120/286 (41%), Gaps = 47/286 (16%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P ++ L++ C G S AF + +++ G PD +T L T+ I LC G
Sbjct: 8 PSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTIT-----LTTF---IKVLCLKG 59
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
++ +AL + MG D VSY +I+G + E ++A EL +D K+V L+ V Y
Sbjct: 60 QIHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQ-LNAVMY 118
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL----- 314
++ G+ C + L EM K P V S LI G
Sbjct: 119 NTVIDGM-------------CKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGK 165
Query: 315 --DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGL 372
D R K+ K +++ + PN Y++L++ LVK
Sbjct: 166 LKDAIGRVKEAKNVFAMMMKQDI---KPNVFTYNSLMDGYC---------LVKE------ 207
Query: 373 VNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
VN+A +TM +G PD YN+LI C+ +A N++ EM
Sbjct: 208 VNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEM 253
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 31/269 (11%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G P+ + N +I+ C LG + A IL + + G PD ++ I C ++ +A
Sbjct: 5 GIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQA 64
Query: 240 YELKVEMDRKVVWG--LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
D+ + G LD+V+Y L+ GL GE + L L +
Sbjct: 65 LHFH---DKVIAMGFHLDQVSYGTLINGLG-------------KVGETKEALELLRRVDG 108
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSNNE 356
K ++V+ + +I+G+ K D ++A +Y P + Y LI C +
Sbjct: 109 KLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIY---PGVVTYSALIIGFCIVGK 165
Query: 357 FKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
K +G VK EA M++ + KP+ YN L+ +C V+KA +++
Sbjct: 166 LKDAIGRVK---------EAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFN 216
Query: 417 EMVRYGFVSHMFSVLALLTALRDHGMYNE 445
M + G + S L+ M +E
Sbjct: 217 TMAQGGVNPDIHSYNILINGFCKSKMTDE 245
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 166/418 (39%), Gaps = 65/418 (15%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ YN +I C RV+ +L M ++G PD ++Y +I FC A
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
++ + P TY+ LI+A ++ + EA L EMLS PD T+ +++ C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262
Query: 154 LEGEFSKAFHMHHQMIHKGVLPD---------------------------FVTGFSPALF 186
EG +AF ++ G + V G P
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TY+ +I LC G+++EA +L+ M E L+PD SY +IS C+ ++ A E +
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEF---L 379
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
D + G L D +Y S++ + C G + L + +++ G P++
Sbjct: 380 DDMISGG-----------HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGS 428
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVK 365
+ L L + K L +I + + + P+ I Y++LI
Sbjct: 429 YNTLFGAL----WSSGDKIRALGMILEMLSNGIDPDEITYNSLI---------------S 469
Query: 366 SFSMRGLVNEAARAHDTMLEGNY-KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
GLV++A M E +P YN ++ C+ + A + MV G
Sbjct: 470 CLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEG 527
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 165/404 (40%), Gaps = 44/404 (10%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
+ K + + C + ++ + L+ M +G PD + +I GF N + KA + +E
Sbjct: 78 TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQV-ME 136
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
+ +K PD F Y+++I C R+ A + M PD +T+ L+ C G
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A + Q++ P + TY +I G ++EA+ +L M GL
Sbjct: 197 LDLALRVMDQLLKDNC--------KPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD +Y +V++G C+ L +A+E L ++ + G+S TY L+
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEF-----------LSRISKNGCVAGVS---TYNILLR 294
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
+G+ L +M KG P+ + S LI L + + + K L ++ +
Sbjct: 295 DLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKAL-- 352
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
P+ YD LI + G V+ A D M+ G + PD YN
Sbjct: 353 -APDGYSYDPLIS---------------ALCREGKVDLAIEFLDDMISGGHLPDILSYNS 396
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
++ C+ N +A N++ ++ G + S L AL G
Sbjct: 397 ILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 183/444 (41%), Gaps = 63/444 (14%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
+ +L +HMV G + D+ K+IK M+++EK + ++ +
Sbjct: 93 YDESLYFLQHMVNRGY-------------KPDVILCTKLIKGFFNMKKIEKAIQVME-IL 138
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
EK PD +Y VI+GFC A + M ++G PD TY+ LI C + RL
Sbjct: 139 EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198
Query: 128 EAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
A + ++L P IT+T L+ A +G +A + +M+ +G+ PD
Sbjct: 199 LALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPD-------- 250
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
+TYN +++G+C G ++ A L + + G +Y I++ + +L
Sbjct: 251 RYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMS 310
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDED-TYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+M L++G TY++LI A C G++ + + M K PD
Sbjct: 311 DM---------------LVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPD 355
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVV 361
LI+ L ++ K L + D M + +P+ + Y++++ + N
Sbjct: 356 GYSYDPLISAL-----CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKN------ 404
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
G +EA + + E P+ YN L + +A M +EM+
Sbjct: 405 ---------GNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN 455
Query: 422 GFVSHMFSVLALLTALRDHGMYNE 445
G + +L++ L G+ ++
Sbjct: 456 GIDPDEITYNSLISCLCRDGLVDQ 479
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY+ +I C ++++ +L+ M EK L+PD SY +I+ C A EF +M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ---EMLSPPDDITFTTLMHACCLEGEF 158
G LPD +Y+S++ +LC EA ++F+ E+ PP+ ++ TL A G+
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM-GLS 217
+A M +M+ G+ PD + TYN++I LC G V++A+ +L M E
Sbjct: 443 IRALGMILEMLSNGIDPDEI--------TYNSLISCLCRDGLVDQAIELLVDMFESEKCQ 494
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
P +SY V+ G C+ + + A E+ M + +E TY L+QG+
Sbjct: 495 PTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLP-NETTYTLLIQGI 542
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 145/348 (41%), Gaps = 64/348 (18%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF---- 97
TY +I+ +++ + +L M +GL PD +Y V+ G C +A+EF
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277
Query: 98 -----------------------------KLEMDQ--KGILPDAFTYSSLIQALCSKRRL 126
KL D KG P+ TYS+LI ALC ++
Sbjct: 278 SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKI 337
Query: 127 SEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
EA ++ + M PD ++ L+ A C EG+ A MI G LPD
Sbjct: 338 DEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD------- 390
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+ +YN+I+ LC G +EAL I + E+G P+A SY + + + +A +
Sbjct: 391 -ILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMI 449
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+EM + G+D DE TY SLI+ C G + + + L +M
Sbjct: 450 LEM---LSNGID-----------PDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495
Query: 304 SVID-SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
+VI + ++ GL K R D L ++ + +PN Y LI+
Sbjct: 496 TVISYNTVLLGLCKVQRIIDAIEVLAAMVNE---GCLPNETTYTLLIQ 540
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 145/328 (44%), Gaps = 35/328 (10%)
Query: 1 MKLLRDSFTATLKTFRH--------MVRNGVVCR---FTAARNSESIQQDLATYNKIIKQ 49
MKLL + + L+ R+ M + G++ R F + + ++TYN +++
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRD 295
Query: 50 HCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPD 109
+ E G ++ M KG P+ ++Y +IT C + +A M +K + PD
Sbjct: 296 LLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPD 355
Query: 110 AFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHH 166
++Y LI ALC + ++ A +M+S PD +++ +++ + C G +A ++
Sbjct: 356 GYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFE 415
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
++ G P +YN + L G ALG++ M G+ PD ++Y +
Sbjct: 416 KLGE--------VGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSL 467
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
IS C++ + +A EL V+M ++Y ++ GL C +
Sbjct: 468 ISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGL-------------CKVQRII 514
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ + M ++G LP+ +LLI G+
Sbjct: 515 DAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 134/348 (38%), Gaps = 59/348 (16%)
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD------FVTGF-------------- 181
D F ++ C ++ ++ + M+++G PD + GF
Sbjct: 77 DTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME 136
Query: 182 ------SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
P +F YNA+I G C RV+ A +L M + G PD V+Y I+I FC
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 236 LRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEM 295
L A + MD+ + TY LI A QG + + + L DEM
Sbjct: 197 LDLALRV---MDQLLKDNCKPTVI-----------TYTILIEATITQGGIDEAMKLLDEM 242
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY------------- 342
+G PD ++++NG+ K+ L I + + Y
Sbjct: 243 LSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKW 302
Query: 343 -----IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
++ D L++ C N + L+ + G ++EA M E PDG Y+
Sbjct: 303 EYGEKLMSDMLVKGCEPNPI-TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
LI CR V A +M+ G + + S ++L +L +G +E
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADE 409
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 149/321 (46%), Gaps = 28/321 (8%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
+S A L + ++ R +V F I ++ T N ++ +C + + K +L
Sbjct: 186 ESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEK 245
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK-LEMDQKGILPDAFTYSSLIQALCSKR 124
M + GL P+ +++ +I+G+C+ G A + + L M + G+ P+ T+++LI C +
Sbjct: 246 MKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEG 305
Query: 125 RLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
+L EA +F EM P+ +T+ TL++ G + +M V D
Sbjct: 306 KLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKAD----- 360
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
+ TYN +I GLC G+ ++A +++ + + L P+A ++ +I+G C +A+
Sbjct: 361 ---ILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFL 417
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+ M R G S +E+T+ L +A+C + + + +M +
Sbjct: 418 VYRSMVR---------------SGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFM 462
Query: 301 LPDSVIDSLLINGLDKKARTK 321
PDS I S + +GL + R +
Sbjct: 463 TPDSSILSEVYSGLCRCGRKQ 483
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 147/348 (42%), Gaps = 60/348 (17%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE----FSKAFHMHHQ 167
T+S L+ L R A +F ++++ ++ F +L+H+ L F F
Sbjct: 104 THSFLLHILTKNRNFKTAQSIFSKIITTNSNL-FESLLHSYTLCNSSPLVFDTLFKTFAH 162
Query: 168 MIH-KGVLPDFVT----GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
M + FV GF P + + NA + + +L R E + R M +SP+ +
Sbjct: 163 MNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYT 222
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
+V+S +C+ EL KA E+ +M M + T+ SLI+ YC +
Sbjct: 223 INMVVSAYCKLGELNKASEVLEKMKD--------------MGLCPNVVTFNSLISGYCDK 268
Query: 283 GELFKVLTLDDEMSHK-GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM-- 339
G L L + D M K G P+ V + LING K+ + + A+ +++ M
Sbjct: 269 GLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHE---------ANRVFSEMKL 319
Query: 340 ----PNYIIYDTLI----------------ENCSNNEFKSVV----GLVKSFSMRGLVNE 375
PN + Y+TLI E N+ K+ + GL+ G +
Sbjct: 320 ANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKK 379
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
AA + +GN P+ + ++ LI C R N +A+ +Y MVR GF
Sbjct: 380 AAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGF 427
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
++ ++ TYN +I E G+G+ M + D L+Y +I G C KA
Sbjct: 321 NVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKA 380
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
E+D+ ++P+A T+S+LI C + A+ +++ M+ P++ TF L A
Sbjct: 381 AYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASA 440
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C +F A + M+ + + PD S L + + GLC GR + AL + +
Sbjct: 441 FCKNEDFDGAVQVLRDMLERFMTPD-----SSIL---SEVYSGLCRCGRKQFALMLCSEI 492
Query: 212 PEMGLSPDAVSY-IIVISG 229
L P IVI+G
Sbjct: 493 EAKRLLPQGFDREKIVITG 511
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
MA+ G++PD SY +I GFC + +A +M K I+P+ TY+SLI LC +
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 60
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+S A L EM PPD IT+++++ A C + KA + ++ + FV G++
Sbjct: 61 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYN 120
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
++ Y +I G C G EAL +L M + G PDA +Y I+I + E A +L
Sbjct: 121 LDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKL 180
Query: 243 KVEM 246
EM
Sbjct: 181 LREM 184
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK- 93
+ D +YN +I C +++V++ + + + M K + P+ ++Y +I G C + GK
Sbjct: 5 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKS---GKI 61
Query: 94 AYEFKL--EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL--------FQEMLSPP--- 140
+Y KL EM +G+ PD TYSS++ ALC ++ +A L F+++
Sbjct: 62 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 121
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D +T ++ C++G F++A + +M G +PD TY II L
Sbjct: 122 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAK--------TYEIIILSLFKKDE 173
Query: 201 VEEALGILRGMPEMGL 216
+ A +LR M GL
Sbjct: 174 NDMAEKLLREMIARGL 189
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD ++ +++ C + +A ++ +M K ++P+ VT Y ++I GLC G
Sbjct: 8 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT--------YTSLIDGLCKSG 59
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
++ AL ++ M + G+ PD ++Y ++ C+N ++ KA L ++ D+V
Sbjct: 60 KISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK-------DQVFE 112
Query: 260 AYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
++G + D Y +I +C +G + L L +M G +PD+ ++I L KK
Sbjct: 113 DLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 171
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + G++PD SY I+I+GFC+ +++ +A L +M K + + +
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI--------------IPNVV 46
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY SLI+ C G++ L L DEM +G PD + S +++ L K + A L
Sbjct: 47 TYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL--- 103
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
T + + + D ++ + + + V +++ F ++GL NEA M + P
Sbjct: 104 ------TKLKDQVFEDLFVKGYNLDVYAYTV-MIQGFCVKGLFNEALALLSKMEDNGCIP 156
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
D Y ++I ++ A + EM+ G +
Sbjct: 157 DAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 190
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I ++ TY +I C ++ + ++ M ++G+ PD ++Y ++ C N K
Sbjct: 39 KNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 98
Query: 94 AYEFKLEM-DQ-------KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
A ++ DQ KG D + Y+ +IQ C K +EA L +M PD
Sbjct: 99 AIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDA 158
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
T+ ++ + + E A + +MI +G+L
Sbjct: 159 KTYEIIILSLFKKDENDMAEKLLREMIARGLL 190
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 159/349 (45%), Gaps = 36/349 (10%)
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PP 140
G C A + +D K + P+ YS++I +C + +++A+ L+ EM++ P
Sbjct: 24 GSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISP 83
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D IT++ L+ C+ G+ + + ++M + + PD ++T+N + C GR
Sbjct: 84 DVITYSALISGFCIVGKLNDTIGLFNKMTAENINPD--------VYTFNISVDAFCKEGR 135
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK-VVWGLDEVTY 259
V+EA +L M + G+ P V+Y +++G+C +E+ A ++ M++ VV +DE
Sbjct: 136 VKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVVKMIDEAIN 195
Query: 260 AY----LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
Y + + D TY+SL++ +G+ ++T + + G PD ++ I GL
Sbjct: 196 LYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSILD--GIRPDMYTYTIFIKGLC 253
Query: 316 KKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNE 375
+ + KD + +++ L+ N + + +++ F +GL E
Sbjct: 254 QSGKLKDARK------------------VFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKE 295
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
A M + PD +Y ++I + A + EM+ G +
Sbjct: 296 ALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIARGLL 344
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 70/316 (22%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+Q ++ Y+ II C + V + M K +SPD ++Y +I+GFC
Sbjct: 46 VQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTI 105
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+M + I PD +T++ + A C + R+ EA ++ M+ P +T+ TLM+
Sbjct: 106 GLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGY 165
Query: 153 CLEGEFSKAFHMHHQMIHKGV-------------------LPDFVT-----------GFS 182
CL E + A + + M GV +PD VT G
Sbjct: 166 CLVKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQP 225
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + TYN+I+ G+ PD +Y I I G CQ+ +L+ A
Sbjct: 226 PDIITYNSILD---------------------GIRPDMYTYTIFIKGLCQSGKLKDA--- 261
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL 301
RKV L L++G + D TY +I +C +G + L L +M G +
Sbjct: 262 -----RKVFEDL-------LVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCI 309
Query: 302 PDSVIDSLLINGLDKK 317
PD+ I ++I L +K
Sbjct: 310 PDAKIYEIVILSLFEK 325
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 30/235 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E+I D+ T+N + C RV++ +L M + G+ P ++Y ++ G+C +
Sbjct: 113 AENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMN 172
Query: 93 KAYEFKLEMDQKGI-------------------LPDAFTYSSLIQALCSKRRLSE--AYH 131
A + M+Q G+ +PD TYSSL+ + + + + Y+
Sbjct: 173 MAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYN 232
Query: 132 LFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
+ + PD T+T + C G+ A + ++ V G++ ++TY +
Sbjct: 233 SILDGIR-PDMYTYTIFIKGLCQSGKLKDARKVFEDLL--------VKGYNLDVYTYTVM 283
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
I G C G +EAL +L M + G PDA Y IVI + E A +L EM
Sbjct: 284 IQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREM 338
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D+ TY IK C +++ + + KG + D +Y +I GFC+ +
Sbjct: 236 DGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKE 295
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
A +M+ G +PDA Y +I +L K A L +EM++
Sbjct: 296 ALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIA 340
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 205/481 (42%), Gaps = 53/481 (11%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E + ++ +IK + + VEKG+ E P+ ++ ++ G G
Sbjct: 186 TEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIG 245
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
+ +E EM + GI + +T++ + LC + + ++M PD +T+ L+
Sbjct: 246 ECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILI 305
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C + AF+++ M +GV+P+ L +Y+A+++GLC G+++EA +
Sbjct: 306 NGYCKKRRLEDAFYLYKIMGIRGVVPN--------LISYSALMNGLCKEGKIKEAHQLFN 357
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLS 267
M + G+ PD VSY +ISG+C +E K + + + G+ D VT + QG
Sbjct: 358 QMVQRGIDPDVVSYNTLISGYC--KEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQG-- 413
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKG-SLPDSVIDSLLINGLDKKARTKDTKAH 326
Y +G+L L + E+ G +P+++ D LL+ L K+ R ++
Sbjct: 414 -----------YTREGKLLSALNMVAELQRFGIKIPENLYDYLLV-ALCKEGRPFAARSF 461
Query: 327 LLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
L+ I D Y E + + L +S V EA M +
Sbjct: 462 LIRISQDGDYVP-----------------EMSTYIKLAESLCSFNNVEEALILKSEMAKK 504
Query: 387 NYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNER 446
+ K + Y +I CR +A N+ EMV G + + AL+ + ++
Sbjct: 505 SMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKA 564
Query: 447 SWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIG--ATLLDVLAEIAMDGLLLDGRKCSY 504
+++ + + D+E + + + F +G A L+++ ++ G + + C Y
Sbjct: 565 VSLLKFFAKEFQVYDTESYNAI----VKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKY 620
Query: 505 A 505
Sbjct: 621 V 621
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 174/401 (43%), Gaps = 56/401 (13%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M G+ + ++ + C K F +M+++G PD TY+ LI C KRR
Sbjct: 254 MGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRR 313
Query: 126 LSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L +A++L++ M P+ I+++ LM+ C EG+ +A + +QM+ +G+ PD V
Sbjct: 314 LEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVV---- 369
Query: 183 PALFTYNAIIHGLCFL-GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
+YN +I G C G+++ +L M +G+ PD V+ IV G+ + +L A
Sbjct: 370 ----SYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALN 425
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGLSDE-----------------------DTYASLINA 278
+ E+ R + + E Y YL+ L E TY L +
Sbjct: 426 MVAELQRFGI-KIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAES 484
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C+ + + L L EM+ K + +I+ L + RT + + L +++
Sbjct: 485 LCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVS---LGI 541
Query: 339 MPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
+P+ I LI C N+ V L+K F+ + + +DT YN
Sbjct: 542 LPDLEIKRALINGYCEENDVDKAVSLLKFFA------KEFQVYDT----------ESYNA 585
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
++ C NV + + ++V+ G+V + + ++ L+
Sbjct: 586 IVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQ 626
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 156/371 (42%), Gaps = 47/371 (12%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F E + DL TYN +I +C +R+E + + M +G+ P+ +SY ++ G C
Sbjct: 285 FLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLC 344
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK-RRLSEAYHLFQEMLS---PPDD 142
+A++ +M Q+GI PD +Y++LI C + ++ L EM+ PD+
Sbjct: 345 KEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDN 404
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGV-LPDFVTGFSPALFTYNAIIHGLCFLGRV 201
+T + EG+ A +M ++ G+ +P+ + Y+ ++ LC GR
Sbjct: 405 VTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENL---------YDYLLVALCKEGRP 455
Query: 202 EEALGILRGMPEMG-LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
A L + + G P+ +YI + C + +A LK EM +K +
Sbjct: 456 FAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSM--------- 506
Query: 261 YLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKART 320
+ TY ++I+ C + L +EM G LPD I LING ++
Sbjct: 507 -----KLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDV 561
Query: 321 KDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAH 380
D LL A + +YDT +S +VK F G V E
Sbjct: 562 -DKAVSLLKFFAK-------EFQVYDT----------ESYNAIVKVFCEVGNVAELMELQ 603
Query: 381 DTMLEGNYKPD 391
D +++ Y P+
Sbjct: 604 DKLVKIGYVPN 614
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 48/311 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L +Y+ ++ C ++++ + M ++G+ PD +SY +I+G+C +
Sbjct: 332 NLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSL 391
Query: 99 L-EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LSPPDDITFTTLMHACC 153
L EM GI PD T + Q + +L A ++ E+ + P+++ + L+ A C
Sbjct: 392 LHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENL-YDYLLVALC 450
Query: 154 LEGEFSKAFHMHHQMIHKG-VLPDFVTGFSPA---------------------------L 185
EG A ++ G +P+ T A L
Sbjct: 451 KEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNL 510
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
TY AII LC + R EA +L M +G+ PD +I+G+C+ ++ KA L
Sbjct: 511 TTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKF 570
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
++ + D ++Y +++ +C G + +++ L D++ G +P+S+
Sbjct: 571 FAKEF--------------QVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSL 616
Query: 306 IDSLLINGLDK 316
+I GL K
Sbjct: 617 TCKYVIRGLQK 627
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 40/382 (10%)
Query: 58 KGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLI 117
+ V I + E+G P ++Y ++ + ++++ G+ PD+ ++++I
Sbjct: 61 EAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMI 120
Query: 118 QALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
A ++ EA +F++M P TF TL+ + G +A + MI G
Sbjct: 121 NAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDG-- 178
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
P TYN +I C +EEA ++ M G+ PD V+Y + F QN
Sbjct: 179 -----NVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG 233
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
E A L ++M + Y + +E T +I YC +G + + L +
Sbjct: 234 ETDNAERLILKMQQ------------YNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYK 281
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN 354
M G P+ V+ + LI G T + L L+ + P+ + Y T++
Sbjct: 282 MKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLM---EEFGIKPDVVTYSTIM----- 333
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
++S GL++ D M++ +PD Y++L + R KA +
Sbjct: 334 ----------NAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEAL 383
Query: 415 YMEMVRYGFVSHMFSVLALLTA 436
M +YG +++ +++
Sbjct: 384 LNSMTKYGLQANVVIFTTIISG 405
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 172/425 (40%), Gaps = 67/425 (15%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TY ++ ++R +L + E G+ PD++ + +I F ++ +A +
Sbjct: 78 IITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFR 137
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLMHACCLE 155
+M + G P T+++LI+ R EA L + M+ P++ T+ L+ A C +
Sbjct: 138 KMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTK 197
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT------GFSPALFTYNA------------------- 190
E +A+++ H+M++ G+ PD VT F+ T NA
Sbjct: 198 NELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNER 257
Query: 191 ----IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
II G C G + EAL L M E+G+ P+ V + +I G+ +
Sbjct: 258 TCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGY---------------L 302
Query: 247 DRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D G++E G+ D TY++++NA+ + G + + D+M PD
Sbjct: 303 DITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQ 362
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
S+L G + + +A L+ + Y N +I+ T+I
Sbjct: 363 AYSILAKGYVRAGQPDKAEA---LLNSMTKYGLQANVVIFTTII---------------S 404
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+ G ++ A R ++ M E + Y LI+ + KA + + M G
Sbjct: 405 GWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAP 464
Query: 426 HMFSV 430
M ++
Sbjct: 465 EMSTI 469
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 40/382 (10%)
Query: 58 KGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLI 117
+ V I + E+G P ++Y ++ + ++++ G+ PD+ ++++I
Sbjct: 61 EAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMI 120
Query: 118 QALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
A ++ EA +F++M P TF TL+ + G +A + MI G
Sbjct: 121 NAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDG-- 178
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
P TYN +I C +EEA ++ M G+ PD V+Y + F QN
Sbjct: 179 -----NVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG 233
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
E A L ++M + Y + +E T +I YC +G + + L +
Sbjct: 234 ETDNAERLILKMQQ------------YNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYK 281
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN 354
M G P+ V+ + LI G T + L L+ + P+ + Y T++
Sbjct: 282 MKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLM---EEFGIKPDVVTYSTIM----- 333
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
++S GL++ D M++ +PD Y++L + R KA +
Sbjct: 334 ----------NAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEAL 383
Query: 415 YMEMVRYGFVSHMFSVLALLTA 436
M +YG +++ +++
Sbjct: 384 LNSMTKYGLQANVVIFTTIISG 405
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 172/425 (40%), Gaps = 67/425 (15%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TY ++ ++R +L + E G+ PD++ + +I F ++ +A +
Sbjct: 78 IITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFR 137
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLMHACCLE 155
+M + G P T+++LI+ R EA L + M+ P++ T+ L+ A C +
Sbjct: 138 KMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTK 197
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT------GFSPALFTYNA------------------- 190
E +A+++ H+M++ G+ PD VT F+ T NA
Sbjct: 198 NELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNER 257
Query: 191 ----IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
II G C G + EAL L M E+G+ P+ V + +I G+ +
Sbjct: 258 TCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGY---------------L 302
Query: 247 DRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D G++E G+ D TY++++NA+ + G + + D+M PD
Sbjct: 303 DITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQ 362
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
S+L G + + +A L+ + Y N +I+ T+I
Sbjct: 363 AYSILAKGYVRAGQPDKAEA---LLNSMTKYGLQANVVIFTTII---------------S 404
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+ G ++ A R ++ M E + Y LI+ + KA + + M G
Sbjct: 405 GWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAP 464
Query: 426 HMFSV 430
M ++
Sbjct: 465 EMSTI 469
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 177/452 (39%), Gaps = 58/452 (12%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
DS A ++++ HM + I+ D YN I++ + +E + +
Sbjct: 85 DSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTT 144
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + + P+ +Y +I GFC A E EM + GI+P + +S++ C
Sbjct: 145 MLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANN 204
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHM------------------ 164
+ EA+ LF +M PPD I+ +++ C G +A
Sbjct: 205 VDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSS 264
Query: 165 ---------HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
++ H F G P + Y +I GL GRV EA +L M ++G
Sbjct: 265 LINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L+PDA Y VI G C L +A L++E+ V T+ L
Sbjct: 325 LTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVC------------------THTIL 366
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I C +G + + L ++M G P V + LINGL K + K +
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRR 426
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD--TMLEGNYKPDGA 393
++ ++ +L + + + L+K + RA+ T L G KPD
Sbjct: 427 HS------LHLSLSQ--GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDII 478
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
YN+L+ C V+ AYN + + + G+ S
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGYPS 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 190/495 (38%), Gaps = 113/495 (22%)
Query: 14 TFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP 73
+F M++N F+ RNS Y+ +I +R + M ++G+ P
Sbjct: 245 SFVWMIKND---GFSLNRNS---------YSSLINAFFKARRYREAHAWYTKMFKQGIVP 292
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D + Y +I G G+A + EM Q G+ PDA+ Y+++IQ LC L+ A L
Sbjct: 293 DVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLR 352
Query: 134 QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
E +S + T T L+ C G ++A + +QM G P++ T+N +I+
Sbjct: 353 LE-ISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGC--------EPSVVTFNTLIN 403
Query: 194 GLCFL-----------------------------GRVEEALGILRGMPEM---------- 214
GLC G+V ++ +L+ EM
Sbjct: 404 GLCKANNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAY 463
Query: 215 --------GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ PD ++Y I+++ C +RE+ AY + +K D VTY +++GL
Sbjct: 464 KLITDLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGL 523
Query: 267 -----SDE-----------------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
DE Y +L+ C + ++ + TL E H SLP
Sbjct: 524 FMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFE--HLKSLPSR 581
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK--SVVG 362
DS I+ L+K Y++ +I L + +FK
Sbjct: 582 DNDS--ISALEK-----------------YLFGEKLEQVIRGLLELDFKARDFKLAPYTI 622
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ F G V+EA + E N K + LI C+ +H A +++ + G
Sbjct: 623 LLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKG 682
Query: 423 FVSHMFSVLALLTAL 437
F+ LLT L
Sbjct: 683 FMLKPMICNHLLTCL 697
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 156/424 (36%), Gaps = 114/424 (26%)
Query: 3 LLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
L R+S+++ + F R + + I D+ Y +I+ RV + +
Sbjct: 257 LNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKM 316
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE---------------------- 100
L M + GL+PDA Y VI G C+ +A +LE
Sbjct: 317 LEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHTILICEMCKRGMV 376
Query: 101 ---------MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF------------------ 133
M++ G P T+++LI LC L +A +LF
Sbjct: 377 AEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRRHSLHLSLSQG 436
Query: 134 --------------QEMLSP------------------PDDITFTTLMHACCLEGEFSKA 161
+EM PD IT+ L++A C++ E + A
Sbjct: 437 SGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCMDREVNAA 496
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
++ + KG P SP TY II GL + R +EA + + M + G P
Sbjct: 497 YNFFEFLQKKGY-P------SPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLS 549
Query: 222 SYIIVISGFCQNRELRKAYELKVE-------MDRKVVWGLDEVTYA----YLMQGLSDED 270
Y +++ C+ ++ +A+ L E D + L++ + +++GL + D
Sbjct: 550 VYRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSISALEKYLFGEKLEQVIRGLLELD 609
Query: 271 ---------TYASLINAYCAQG---ELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
Y L+ +C G E +L++ DE + K + V LI GL K+
Sbjct: 610 FKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCV---HLIRGLCKEQ 666
Query: 319 RTKD 322
R D
Sbjct: 667 RLHD 670
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 144/364 (39%), Gaps = 78/364 (21%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ + G+ + S R ++ + + KA E M + GI PDA Y+++++ + +++
Sbjct: 75 LKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKL 134
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
L A L+ ML P+ T+ L+ C GE A M +M G++P
Sbjct: 135 LELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP------- 187
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ + +I++G C V+EA + M E PD +S +V++GFC+ L +A
Sbjct: 188 -CVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF 246
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
VW + ++ + ++Y+SLINA+ + +M +G +P
Sbjct: 247 --------VWMIKNDGFSL------NRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVP 292
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D V+ ++
Sbjct: 293 DVVLYAI----------------------------------------------------- 299
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
+++ S G V EAA+ + M + PD YN +I C +++A ++ +E+ +
Sbjct: 300 MIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHN 359
Query: 423 FVSH 426
+H
Sbjct: 360 VCTH 363
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 49/301 (16%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
++ D T+N +I+ C+ +++ L M G PD +SY ++TG C +A
Sbjct: 193 NLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSYNTLMTGLCRVNDVDRA 252
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
+ E++ P+ +Y +I C + EA +F EM+ P +F L+
Sbjct: 253 RDLLKEINS----PNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDG 308
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPA 184
G+ S A MH +MI G PD VT FS
Sbjct: 309 FVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSAN 368
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
L+TY+ II LC R++EA +LR + + + P A Y VI G+C++ + +A + V
Sbjct: 369 LYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGYCKSGNVDEANAIVV 428
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
+M++K D+ T+ LI +C +G ++ + + M G PD
Sbjct: 429 DMEKKCK---------------PDKLTFTILIIGHCMKGRAYEAIGIFYRMLATGCSPDD 473
Query: 305 V 305
V
Sbjct: 474 V 474
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 156/350 (44%), Gaps = 57/350 (16%)
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
RL +A LF+E++ D TF L+ C+ GE +AF + M + G PD V+
Sbjct: 178 RLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVS-- 235
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
YN ++ GLC + V+ A +L+ + SP+ VSY+IVISG+C+ +++A
Sbjct: 236 ------YNTLMTGLCRVNDVDRARDLLKEIN----SPNDVSYMIVISGYCKLSNMKEASS 285
Query: 242 LKVEMDRKVVWGLDEVTYAYLMQGL----------------------SDEDTYASLINAY 279
+ EM R V ++ L+ G D T+ SLI+ Y
Sbjct: 286 IFNEMVRSGVQP-SVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGY 344
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C G++ L L +EM + + S++I+ L K R ++ AH LL + + +
Sbjct: 345 CRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQE--AHELLRLLN-QSEIV 401
Query: 340 PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
P IY+ +I+ G KS G V+EA A +E KPD + +LI
Sbjct: 402 PQAFIYNPVID-----------GYCKS----GNVDEA-NAIVVDMEKKCKPDKLTFTILI 445
Query: 400 FDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWV 449
HC + ++A ++ M+ G ++ L + L GM E + V
Sbjct: 446 IGHCMKGRAYEAIGIFYRMLATGCSPDDVTIRTLSSCLLKSGMPTEAARV 495
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F MVR+GV Q +A++N +I + V + + M G PD
Sbjct: 287 FNEMVRSGV-------------QPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPD 333
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+++ +I G+C E EM + + +TYS +I ALC RL EA+ L +
Sbjct: 334 VVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLR 393
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
+ P + ++ C G +A ++ D P T+ +
Sbjct: 394 LLNQSEIVPQAFIYNPVIDGYCKSGNVDEA---------NAIVVDMEKKCKPDKLTFTIL 444
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
I G C GR EA+GI M G SPD V+
Sbjct: 445 IIGHCMKGRAYEAIGIFYRMLATGCSPDDVT 475
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
ARN +L TY+ II C R+++ +LR + + + P A Y VI G+C +
Sbjct: 362 ARN---FSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGYCKSG 418
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFT 146
+A ++M++K PD T++ LI C K R EA +F ML+ PDD+T
Sbjct: 419 NVDEANAIVVDMEKK-CKPDKLTFTILIIGHCMKGRAYEAIGIFYRMLATGCSPDDVTIR 477
Query: 147 TLMHACCLEG 156
TL +C L+
Sbjct: 478 TL-SSCLLKS 486
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 148/355 (41%), Gaps = 45/355 (12%)
Query: 73 PDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL 132
P L Y +I C + K+YE EM + GI P FTY+S+ LC ++ +S A +
Sbjct: 448 PTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVM 507
Query: 133 FQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYN 189
+EM S P T L+ C G +A M +G LPD V+ Y+
Sbjct: 508 LKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVS--------YS 559
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
A I GL + V+ A+ I + + G PD V + ++I G C+ +A +L E+ ++
Sbjct: 560 AAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKR 619
Query: 250 VVWGLDEVTYAYLMQGLSDED-TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
GLS TY I+ +C G + K + M+ + +P V +
Sbjct: 620 ---------------GLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYT 664
Query: 309 LLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFS 368
L++G K+ R D +LL PN I + LI GL K
Sbjct: 665 TLVDGFCKEERPDDA---ILLFKEMEKNGCPPNQITFMALI-----------YGLCKCCR 710
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
EA M + KPD +Y L+ + LN+ A+ ++ EMV GF
Sbjct: 711 ----PTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGF 761
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
++K+ C RV + L M ++G PD +SY I G N + A + ++ G
Sbjct: 526 LVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHG 585
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAF 162
PD ++ LI+ LC R +EA LF E++ P +T+ + C G KA
Sbjct: 586 HCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAM 645
Query: 163 HMHHQMIHKGVLPDFVT---------------------------GFSPALFTYNAIIHGL 195
+M + +P VT G P T+ A+I+GL
Sbjct: 646 AHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGL 705
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
C R EAL LR M + + PD+ Y+ ++S + + L A+E+ EM
Sbjct: 706 CKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREM 756
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ +N +I+ C + R + + + ++GLSP ++Y I +C N KA
Sbjct: 589 DVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHL 648
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
M ++ +P TY++L+ C + R +A LF+EM PP+ ITF L++ C
Sbjct: 649 FRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKC 708
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
++A +M K + PD F Y A++ + A I R M ++G
Sbjct: 709 CRPTEALCYLREMQQKEMKPDS--------FIYVALLSAYLSDLNLTSAFEIFREMVDLG 760
Query: 216 LSPDAV--SYIIVISG---FCQNRELRKAYELKVE 245
P + +Y V+ FC++ ++ +E
Sbjct: 761 FFPKPLDKNYPTVVDAILKFCKDDRTSSGIQVLIE 795
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 150/436 (34%), Gaps = 93/436 (21%)
Query: 55 RVEKGVGILRGMA-EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
RV+K + + M E +PD Y +I G C N+ +A EM + G+ PD
Sbjct: 269 RVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGIL 328
Query: 114 SSLIQALC-SKRRLSEAYHLFQEMLSPPDDIT--FTTLMHACCLEGEFSKAFHMHHQMIH 170
+ LI SK +S E + + L+ +G +A+ + MI
Sbjct: 329 TKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQ 388
Query: 171 --------------------KGVLPDFVTGFS---------------------------- 182
+ V P+ +T FS
Sbjct: 389 SKSSTDSDENRMDVFFKTVKRMVFPN-ITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDK 447
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + YN +I LC R+E++ +LR M E+G+ P +Y + C+ +++ A +
Sbjct: 448 PTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVM 507
Query: 243 KVEMDR--KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
EM W + + L L+ C G + + D M+ +G
Sbjct: 508 LKEMGSCGHGPW----IKHTTL------------LVKELCDHGRVIEACEFLDNMTQQGF 551
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD-YMYTSMPNYIIYDTLIEN-CSNNEFK 358
LPD V S I GL H + I D + + P+ + ++ LI C N F
Sbjct: 552 LPDIVSYSAAIGGLVNIQEVD----HAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFT 607
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
L RGL P YNL I C+ NV KA M
Sbjct: 608 EAEDLFHELVKRGL----------------SPSVVTYNLFIDCWCKNGNVDKAMAHLFRM 651
Query: 419 VRYGFVSHMFSVLALL 434
+ V + + L+
Sbjct: 652 TKEDKVPSVVTYTTLV 667
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 24 VCRFTAARN------SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALS 77
V RFT A + + + TYN I C V+K + L M ++ P ++
Sbjct: 603 VNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVT 662
Query: 78 YRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
Y ++ GFC P A EM++ G P+ T+ +LI LC R +EA +EM
Sbjct: 663 YTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQ 722
Query: 138 S---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
PD + L+ A + + AF + +M+ G P
Sbjct: 723 QKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFP 763
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TY ++ C +R + + + + M + G P+ +++ +I G C P +A +
Sbjct: 660 VVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLR 719
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-----SPPDDITFTTLMHAC-- 152
EM QK + PD+F Y +L+ A S L+ A+ +F+EM+ P D + T++ A
Sbjct: 720 EMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFPKPLDKNYPTVVDAILK 779
Query: 153 -CLEGEFSKAFHMHHQMIHKGVLP 175
C + S + +I +G LP
Sbjct: 780 FCKDDRTSSGIQV---LIEEGKLP 800
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 181/464 (39%), Gaps = 63/464 (13%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F M R G+ F R S + T ++I + L+ +E + ++G G D
Sbjct: 137 FDEMSRKGL---FVPDRYSHN------TLLEVISKCGLVDLMEMRLNEMKGF---GWEFD 184
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR--RLSEAYHL 132
+ VI +CN + +A EM++KG + + + ALC + + +A+ L
Sbjct: 185 KYTLTPVIVTYCNAQRFDQALSVYKEMEEKGWVDERVCS---MMALCFSKLGEVDKAFEL 241
Query: 133 FQEM------LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+ M LS + TF L+H E KA + +M + F+P +
Sbjct: 242 VERMGECGMRLS---EKTFCVLIHGFVKESRVDKALQLFDKMRRED-------SFTPDVS 291
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR----ELRKAYEL 242
Y+ +I GLC + A+ + M E G+ PD +IS F ++ L +
Sbjct: 292 LYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPE 351
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDE--DTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
E ++ +V + + Y+ GL DE +I + + + + + +
Sbjct: 352 GEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMV 411
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM--YTSMPNYIIYDTLIEN-CSNNEF 357
P+ S++I+G K+ + L L + + M + P +IY+ LI++ C +N
Sbjct: 412 FPNITSFSIVIDGF-----LKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRL 466
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
+ L++ G+ +P YN + C+R +V A M E
Sbjct: 467 EKSYELLREMKELGI----------------EPTHFTYNSIYGCLCKRKDVSAACVMLKE 510
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLND 461
M G + L+ L DHG E + N + L D
Sbjct: 511 MGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPD 554
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 197/449 (43%), Gaps = 72/449 (16%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYN----KIIKQHCLMQRVEKGVGI 62
++TA + + R VC + + D+ Y+ +++ L++ K
Sbjct: 200 TYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRK---- 255
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
+R M EKG+ D +SY +I GF K++ F +M ++GI+P+ TY++++ A C
Sbjct: 256 MREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCK 315
Query: 123 KRRLSEAYHLF---QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
K R+ EA+ LF ++M D+ F L+ G+F + F + +M +G+ P+ V
Sbjct: 316 KGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVV- 374
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
TYNA+++GL GR +EA + ++ D V+Y ++ G+ + +
Sbjct: 375 -------TYNAVVNGLSKYGRTQEADEFSK-----NVTADVVTYSTLLHGYTEEDNVLGI 422
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGL----SDEDTYASLINAYCAQGELFKVLTLDDEM 295
+ K ++ + +D V L++ L + ED YA L+K M
Sbjct: 423 LQTKKRLEEAGI-SMDVVMCNVLIRALFMMQAYEDVYA-----------LYK------GM 464
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CSN 354
+P+S+ +I+G K + + L + D+ TS+ +Y Y+++I C
Sbjct: 465 PEMDLVPNSITYCTMIDGYCKVGKINEA----LEVFDDFRKTSISSYACYNSIINGLCKK 520
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA----------------VYNLL 398
+ + + +GL+ + H +++ +K + + +YN +
Sbjct: 521 GMVEMAIEALLELDHKGLMLDTG-THRLLMKTIFKENSSKVVLDLVCRMESLELDIYNAI 579
Query: 399 ----IFDHCRRLNVHKAYNMYMEMVRYGF 423
IF C+R + AY ++M M + G
Sbjct: 580 CNDSIFLLCKRGLLDDAYQLWMAMKKKGL 608
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 174/429 (40%), Gaps = 73/429 (17%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAE--KGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ 103
+I++ C + V K + ++ M E K D V++ F P + F D
Sbjct: 134 VIQRFCNVGHVGKAIEVVELMNEYRKDYPFDDFVCSSVVSAFSRAGKPELSLWF---FDN 190
Query: 104 -KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFS 159
G P+ TY++++ ALC R+ E L ++M D + ++ + E
Sbjct: 191 FMGSRPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLV 250
Query: 160 KAFHMHHQMIHKGVLPDFVT------GFS---------------------PALFTYNAII 192
+ F +M+ KG+ DFV+ GFS P TY AI+
Sbjct: 251 EVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIM 310
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
C GR+EEA G+ M +MG+ D ++++I GF + + + ++L VEM+++ +
Sbjct: 311 SAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGI- 369
Query: 253 GLDEVTYAYLMQGLS-----------------DEDTYASLINAYCAQGELFKVLTLDDEM 295
G + VTY ++ GLS D TY++L++ Y + + +L +
Sbjct: 370 GPNVVTYNAVVNGLSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRL 429
Query: 296 SHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN 355
G D V+ ++LI L +D A +Y MP + I C+
Sbjct: 430 EEAGISMDVVMCNVLIRALFMMQAYEDVYA---------LYKGMPEMDLVPNSITYCT-- 478
Query: 356 EFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMY 415
++ + G +NEA D + + A YN +I C++ V A
Sbjct: 479 -------MIDGYCKVGKINEALEVFDDFRKTSI-SSYACYNSIINGLCKKGMVEMAIEAL 530
Query: 416 MEMVRYGFV 424
+E+ G +
Sbjct: 531 LELDHKGLM 539
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 22/266 (8%)
Query: 36 IQQDLAT----YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+Q DL Y +I C + K + + + +KG++ + + Y +I G C++ C
Sbjct: 706 VQDDLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCL 765
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTL 148
+A+ +++ ++ TY++LI ALC + L +A H+F++M+ P + +L
Sbjct: 766 IEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSL 825
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ A G+ KAF + + M + + D FT +++I+ C G +E AL
Sbjct: 826 LVATSKIGQLEKAFELLNDMEKQYIKFDN--------FTVSSVINCYCQKGDMEGALEFY 877
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+SPD + ++ +I G C + + + EM + + ++ D
Sbjct: 878 YKFKGKDISPDFLGFLYMIRGLCTKGRMEETRSVLREM----LQSKNVAEMINIVNSRVD 933
Query: 269 EDTYASLINAYCAQG---ELFKVLTL 291
++ I A C QG E KVL L
Sbjct: 934 TESICDFIAALCDQGRIQEAVKVLNL 959
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS-----PPDDITFTTLMHACCLEGEFSKAFHMHH 166
+ +IQ C+ + +A + + M P DD ++++ A FS+A
Sbjct: 130 VFCCVIQRFCNVGHVGKAIEVVELMNEYRKDYPFDDFVCSSVVSA------FSRAGKPEL 183
Query: 167 QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
+ D G P L TY A+++ LC LGRV+E G++R M E GL D V Y +
Sbjct: 184 SLW----FFDNFMGSRPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVW 239
Query: 227 ISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------------------- 267
+ G+ + + L + + EM K + D V+Y L+ G S
Sbjct: 240 VCGYVEEKVLVEVFRKMREMVEKGICH-DFVSYTILIDGFSKLGDVEKSFTFLAKMIKEG 298
Query: 268 ---DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
++ TY ++++AYC +G + + L M G D + +LI+G R D
Sbjct: 299 IIPNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGF---GRVGDFD 355
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCS 353
L++ PN + Y+ ++ S
Sbjct: 356 RVFQLLVEMEKRGIGPNVVTYNAVVNGLS 384
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 11/218 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + ++ +YN +I C + ++K + M +G +P+ +++ +I G C +
Sbjct: 409 SDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAII 468
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
KA E + + + PD FT+S +I LC +R EA+ F EM+ P+ I + L+
Sbjct: 469 KARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILI 528
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C GE +++ + +M +G+ PD +++YNA+I C + +VE+A +
Sbjct: 529 RSLCSIGETTRSVKLLRRMQEEGISPD--------IYSYNALIQIFCRMNKVEKAKKLFD 580
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
M + G +PD +Y I+ ++ L +A ++ M+
Sbjct: 581 SMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSME 618
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 39 DLATYNKIIKQHCLMQRVE--KGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
D + +N I+ CL++R E + I ++G+ P +Y + + + +
Sbjct: 345 DSSVFNVIMA--CLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDEGDQ 402
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
+M G++ + +Y+ LI C + +A +F EM P+ +TF TL++ C
Sbjct: 403 ISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHC 462
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+G KA + ++ + PD +FT++ II GLC L R EEA M E
Sbjct: 463 KDGAIIKARELLEMLLENRLKPD--------IFTFSCIIDGLCRLKRTEEAFECFNEMVE 514
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTY 272
G++P+A+ Y I+I C E ++ +L M +G+S D +Y
Sbjct: 515 WGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQE---------------EGISPDIYSY 559
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
+LI +C ++ K L D MS G PD+ S I L + R ++ K
Sbjct: 560 NALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAK 611
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 25/254 (9%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTY 113
++ ++G I M GL + +SY +I FC KA E EM +G P+ T+
Sbjct: 395 EQRDEGDQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTF 454
Query: 114 SSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIH 170
++LI C + +A L + +L PD TF+ ++ C +AF ++M+
Sbjct: 455 NTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVE 514
Query: 171 KGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGF 230
GV P+ + YN +I LC +G ++ +LR M E G+SPD SY +I F
Sbjct: 515 WGVNPNAII--------YNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIF 566
Query: 231 CQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLT 290
C+ ++ KA +L M + G + Y TY++ I A G L +
Sbjct: 567 CRMNKVEKAKKLFDSMSKS---GFNPDNY-----------TYSAFIAALSESGRLEEAKK 612
Query: 291 LDDEMSHKGSLPDS 304
+ M G PDS
Sbjct: 613 MFYSMEANGCSPDS 626
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 53/447 (11%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +I ++ + M PD ++Y +I G C +A +M
Sbjct: 172 YNSLIDALVKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVCKIGVVDEALRLIRQMK 231
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAY---HLFQEMLSPPDDITFTTLMHACCLEGEFS 159
KG+ P+ FTY+ LI C+ +R+ EA+ + +E ++ T TL+H + S
Sbjct: 232 DKGLFPNVFTYTILIDGFCNAKRVDEAFGVLDMMKESRVCANEATIRTLVHGVFRCVDPS 291
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
KAF + + + + DF +G + +++ L +E + +R G PD
Sbjct: 292 KAFVLLSEFLDRE--EDFCSG----KLACDTVLYCLANNSMAKEMVVFIRKALARGYVPD 345
Query: 220 AVSYIIVISGFCQNRELRKAYEL-KVEMDRKVVWGL-------------------DEVTY 259
+ + ++++ + ELR+A E+ ++ R V G+ D+++
Sbjct: 346 SSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDEGDQISD 405
Query: 260 AYLMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+ GL S+ +Y LI+ +C + K + EM +G P+ V + LING K
Sbjct: 406 QMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDG 465
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE------------NCSNNEFKSVVG---- 362
+ L +++ + + P+ + +I+ C N + V
Sbjct: 466 AIIKARELLEMLLENRL---KPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAI 522
Query: 363 ----LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
L++S G + + M E PD YN LI CR V KA ++ M
Sbjct: 523 IYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSM 582
Query: 419 VRYGFVSHMFSVLALLTALRDHGMYNE 445
+ GF ++ A + AL + G E
Sbjct: 583 SKSGFNPDNYTYSAFIAALSESGRLEE 609
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 150/364 (41%), Gaps = 62/364 (17%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKA 161
GI P Y+SLI AL + AY FQ+M+ PD IT+ L+H C G +A
Sbjct: 164 GISPTTRLYNSLIDALVKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVCKIGVVDEA 223
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
+ QM KG+ P+ +FTY +I G C RV+EA G+L M E + +
Sbjct: 224 LRLIRQMKDKGLFPN--------VFTYTILIDGFCNAKRVDEAFGVLDMMKESRVCANEA 275
Query: 222 SYIIVISGFCQNRELRKAYELKVE-MDRKVVW-----GLDEVTYAYLMQGLSDEDTYASL 275
+ ++ G + + KA+ L E +DR+ + D V Y ++ E
Sbjct: 276 TIRTLVHGVFRCVDPSKAFVLLSEFLDREEDFCSGKLACDTVLYCLANNSMAKE------ 329
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD--------TKAHL 327
++ + +G +PDS + ++++ L K+A ++ TK +
Sbjct: 330 ------------MVVFIRKALARGYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGV 377
Query: 328 ------LLIIADYMYT--------SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLV 373
L +A+ +Y + + ++ D LI N + L+ F L+
Sbjct: 378 KPGIGTYLTLAEALYKDEQRDEGDQISDQMVSDGLISNVVSYNM-----LIDCFCKVSLM 432
Query: 374 NEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLAL 433
++A+ M + P+ +N LI HC+ + KA + ++ +F+ +
Sbjct: 433 DKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCI 492
Query: 434 LTAL 437
+ L
Sbjct: 493 IDGL 496
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 8 FTATLKTFRHMV----RNGVVCRFTAARN------SESIQQDLATYNKIIKQHCLMQRVE 57
FT L TF ++ ++G + + AR ++ D+ T++ II C ++R E
Sbjct: 447 FTPNLVTFNTLINGHCKDGAIIK---ARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTE 503
Query: 58 KGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLI 117
+ M E G++P+A+ Y +I C+ ++ + M ++GI PD ++Y++LI
Sbjct: 504 EAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALI 563
Query: 118 QALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL 174
Q C ++ +A LF M PD+ T++ + A G +A M + M G
Sbjct: 564 QIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSMEANGCS 623
Query: 175 PD 176
PD
Sbjct: 624 PD 625
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 51/328 (15%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
QD + Y+ + HC R+++ + +L+ GL+ ++ +I + KA+E
Sbjct: 460 QDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEI 519
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCL 154
M + G P A T +SL+ LC K +L EA L M + +T L
Sbjct: 520 YHIMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFK 579
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFT 187
+ A M +M +G+ PD V GF P F
Sbjct: 580 MNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFA 639
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YN++I G C LGR+ +AL + + M GL PD ++ I+I FC+ ++ A + ++M
Sbjct: 640 YNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMH 699
Query: 248 R---------------------KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELF 286
R +V D V Y D TY ++ YC+ ++
Sbjct: 700 RIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMN 759
Query: 287 KVLTLDDEMSHKGSLPDSVIDSLLINGL 314
+ + + DE+ G +P++V + ++ G+
Sbjct: 760 RAIAILDELVSAGIVPNTVTYNTVMGGI 787
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 178/448 (39%), Gaps = 87/448 (19%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C +V G + M + G PD +Y +I G C A + M
Sbjct: 289 TFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLRLM 348
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
++G P T+++++ +LC + + EA LF +L+ P+ + T+M +
Sbjct: 349 MKRGCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDI 408
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A ++ +M KGV PD V T+N + G GR E+ +L + EMG
Sbjct: 409 GRASLLYKEMRIKGVPPDCV--------TFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQ 460
Query: 219 DAVSYIIVISGFCQNRELRKAYEL---KVEMDRKV-VWGLDEVTYAYLMQGLSDE----- 269
D Y + +S C L +A +L + M V + + AY +GL D+
Sbjct: 461 DCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIY 520
Query: 270 ------------DTYASLINAYCAQGEL-----------------------------FKV 288
T SL+ C +G+L FK+
Sbjct: 521 HIMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKM 580
Query: 289 LTLD------DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
+D EM +G PD V S LI+GL K + L +++ +PN
Sbjct: 581 NDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLS---IGFVPNN 637
Query: 343 IIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
Y++LI C+ + + K +RGL+ PD +N++I
Sbjct: 638 FAYNSLIGGFCNLGRMAQALKVEKEMRLRGLL----------------PDTFTFNIIIDR 681
Query: 402 HCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
CR+ N+ A + +++M R G + +F+
Sbjct: 682 FCRQGNMKSAIDAFLDMHRIGLMPDIFT 709
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 58/419 (13%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ + A YN ++ + + + + + + M KG+ PD +++ + G
Sbjct: 388 VVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNIFVGGHYKYGRQEDWT 447
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLMHAC 152
+ ++ + G D Y + C RL +A L ++ L+ + F +L+ A
Sbjct: 448 KLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAY 507
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
EG KAF ++H M+ GF+P+ T N+++ GLC G+++EA +L M
Sbjct: 508 SREGLEDKAFEIYHIMVK--------CGFTPSASTCNSLLMGLCRKGKLQEARALLHRMS 559
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----- 267
E G V+Y ++ G+ + ++ A + EM + ++ D V ++ L+ GLS
Sbjct: 560 EKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYP-DVVAFSALIDGLSKAGNV 618
Query: 268 DED-----------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
DE Y SLI +C G + + L ++ EM +G LPD+ +++
Sbjct: 619 DEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNII 678
Query: 311 INGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMR 370
I D+ R + K+ + + + MP+ ++ L+ G K+F M
Sbjct: 679 I---DRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVG-----------GYCKAFDM- 723
Query: 371 GLVNEAARAHDT---MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSH 426
RA D M PD YN+ + +C +++A + E+V G V +
Sbjct: 724 ------VRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVSAGIVPN 776
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +I C + R+ + + + + M +GL PD ++ +I FC A + L+M
Sbjct: 640 YNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMH 699
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFS 159
+ G++PD FT++ L+ C + A + +M PD T+ MH C + +
Sbjct: 700 RIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMN 759
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
+A + +++ G++P+ VT YN ++ G+C ++ A+ + + +MG P+
Sbjct: 760 RAIAILDELVSAGIVPNTVT--------YNTVMGGIC-SDILDRAMIVTAKLIKMGFIPN 810
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
++ I++S FC+ +A L + R + + DE++Y L
Sbjct: 811 VITTNILLSHFCKQGMPERAL-LWGQKLRDICFDFDEISYIIL 852
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
I D+ ++ +I V++ + M G P+ +Y +I GFCN +
Sbjct: 596 RGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQ 655
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A + + EM +G+LPD FT++ +I C + + A F +M PD TF L+
Sbjct: 656 ALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVG 715
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
C + +A + ++M G+ PD TYN +HG C + ++ A+ IL
Sbjct: 716 GYCKAFDMVRADDIVNKMYPYGLYPDIT--------TYNIRMHGYCSVRKMNRAIAILDE 767
Query: 211 MPEMGLSPDAVSYIIVISGFCQN 233
+ G+ P+ V+Y V+ G C +
Sbjct: 768 LVSAGIVPNTVTYNTVMGGICSD 790
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 148/367 (40%), Gaps = 48/367 (13%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML--- 137
++ GF N +A + M G+ P + L + L + LF++M+
Sbjct: 223 LMRGFLNVGMSLEALDILNRMRDVGVRPSVTAMTILFKLLFRVGDYGTIWSLFKDMIRKG 282
Query: 138 SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
P ITF T++ C G+ + H M G PD +FTYN II+G C
Sbjct: 283 PAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPD--------VFTYNVIINGCCV 334
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
G A+G LR M + G P ++ ++ C+ + +A +L DR + G+
Sbjct: 335 GGNTSVAVGWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEARKL---FDRVLALGV--- 388
Query: 258 TYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
+ + Y ++++ Y ++ + L EM KG PD V ++ + G K
Sbjct: 389 --------VPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNIFVGGHYKY 440
Query: 318 ARTKDTKAHLLLIIADYMYTSMPNYIIYD-TLIENCSNNEFKSVVGLVK----------- 365
R +D LL + + + + +YD T+ +C + L+K
Sbjct: 441 GRQEDW-TKLLTDLTEMGF--FQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSV 497
Query: 366 --------SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
++S GL ++A + M++ + P + N L+ CR+ + +A +
Sbjct: 498 AAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHR 557
Query: 418 MVRYGFV 424
M GF+
Sbjct: 558 MSEKGFL 564
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 176/452 (38%), Gaps = 58/452 (12%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
DS A ++++ HM + I+ D YN I++ + +E + +
Sbjct: 85 DSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTT 144
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + + P+ +Y +I GFC A E EM + GI+P + +S++ C
Sbjct: 145 MLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANN 204
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHM------------------ 164
+ EA+ LF +M PPD I+ +++ C G +A
Sbjct: 205 VDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYAS 264
Query: 165 ---------HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
++ H F G P + Y +I GL GRV EA +L M ++G
Sbjct: 265 LINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L+PD+ Y VI G C L +A L +E+ V T+ L
Sbjct: 325 LTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVC------------------THTIL 366
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I C +G + + L ++M G P V + LINGL K + K +
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRR 426
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD--TMLEGNYKPDGA 393
++ ++ +L + + + L+K + RA+ T L G KPD
Sbjct: 427 HS------LHLSLSQ--GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDII 478
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
YN+L+ C V+ AYN + + + G+ S
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGYPS 510
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 189/495 (38%), Gaps = 113/495 (22%)
Query: 14 TFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP 73
+F M++N F+ RNS Y +I +R + M ++G+ P
Sbjct: 245 SFVWMIKND---GFSLNRNS---------YASLINAFFKARRYREAHACYTKMFKEGIVP 292
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D + Y +I G G+A + EM Q G+ PD++ Y+++IQ LC L+ A L
Sbjct: 293 DVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLS 352
Query: 134 QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
E +S + T T L+ C G ++A + +QM G P++ T+N +I+
Sbjct: 353 LE-ISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGC--------EPSVVTFNTLIN 403
Query: 194 GLCFL-----------------------------GRVEEALGILRGMPEM---------- 214
GLC G+V ++ +L+ EM
Sbjct: 404 GLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAY 463
Query: 215 --------GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ PD ++Y I+++ C +RE+ AY + +K D VTY +++GL
Sbjct: 464 KLITDLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGL 523
Query: 267 -----SDE-----------------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
DE Y +L+ C + ++ + TL + H SLP
Sbjct: 524 FMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTL--YLEHLKSLPSR 581
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK--SVVG 362
DS I+ L+K Y++ +I L + +FK
Sbjct: 582 DNDS--ISTLEK-----------------YLFGEKLEQVIRGLLELDFKARDFKLAPYTI 622
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ F G V+EA + E N K + LI C+ +H A +++ + G
Sbjct: 623 LLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKG 682
Query: 423 FVSHMFSVLALLTAL 437
F+ LLT L
Sbjct: 683 FMLKPMICNHLLTCL 697
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 145/367 (39%), Gaps = 78/367 (21%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
L + + G+ + S R ++ + + KA E M + GI PDA Y+++++ + +
Sbjct: 72 LELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLN 131
Query: 123 KRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
++ L A L+ ML P+ T+ L+ C GE A M +M G++P
Sbjct: 132 EKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP---- 187
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+ + +I++G C V+EA + M E PD +S +V++GFC+ L +A
Sbjct: 188 ----CVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEA 243
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
VW + ++ + ++YASLINA+ + +M +G
Sbjct: 244 LSF--------VWMIKNDGFSL------NRNSYASLINAFFKARRYREAHACYTKMFKEG 289
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
+PD V+ ++
Sbjct: 290 IVPDVVLYAI-------------------------------------------------- 299
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+++ S G V EAA+ + M + PD YN +I C +++A ++ +E+
Sbjct: 300 ---MIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEIS 356
Query: 420 RYGFVSH 426
+ +H
Sbjct: 357 EHNVCTH 363
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 176/452 (38%), Gaps = 58/452 (12%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
DS A ++++ HM + I+ D YN I++ + +E + +
Sbjct: 85 DSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTT 144
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + + P+ +Y +I GFC A E EM + GI+P + +S++ C
Sbjct: 145 MLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANN 204
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHM------------------ 164
+ EA+ LF +M PPD I+ +++ C G +A
Sbjct: 205 VDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYAS 264
Query: 165 ---------HHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
++ H F G P + Y +I GL GRV EA +L M ++G
Sbjct: 265 LINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
L+PD+ Y VI G C L +A L +E+ V T+ L
Sbjct: 325 LTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVC------------------THTIL 366
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYM 335
I C +G + + L ++M G P V + LINGL K + K +
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRR 426
Query: 336 YTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD--TMLEGNYKPDGA 393
++ ++ +L + + + L+K + RA+ T L G KPD
Sbjct: 427 HS------LHLSLSQ--GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDII 478
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
YN+L+ C V+ AYN + + + G+ S
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGYPS 510
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 189/495 (38%), Gaps = 113/495 (22%)
Query: 14 TFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP 73
+F M++N F+ RNS Y +I +R + M ++G+ P
Sbjct: 245 SFVWMIKND---GFSLNRNS---------YASLINAFFKARRYREAHACYTKMFKEGIVP 292
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D + Y +I G G+A + EM Q G+ PD++ Y+++IQ LC L+ A L
Sbjct: 293 DVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLS 352
Query: 134 QEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
E +S + T T L+ C G ++A + +QM G P++ T+N +I+
Sbjct: 353 LE-ISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGC--------EPSVVTFNTLIN 403
Query: 194 GLCFL-----------------------------GRVEEALGILRGMPEM---------- 214
GLC G+V ++ +L+ EM
Sbjct: 404 GLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAY 463
Query: 215 --------GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+ PD ++Y I+++ C +RE+ AY + +K D VTY +++GL
Sbjct: 464 KLITDLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGL 523
Query: 267 -----SDE-----------------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
DE Y +L+ C + ++ + TL + H SLP
Sbjct: 524 FMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTL--YLEHLKSLPSR 581
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFK--SVVG 362
DS I+ L+K Y++ +I L + +FK
Sbjct: 582 DNDS--ISTLEK-----------------YLFGEKLEQVIRGLLELDFKARDFKLAPYTI 622
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
L+ F G V+EA + E N K + LI C+ +H A +++ + G
Sbjct: 623 LLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKG 682
Query: 423 FVSHMFSVLALLTAL 437
F+ LLT L
Sbjct: 683 FMLKPMICNHLLTCL 697
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 145/367 (39%), Gaps = 78/367 (21%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
L + + G+ + S R ++ + + KA E M + GI PDA Y+++++ + +
Sbjct: 72 LELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLN 131
Query: 123 KRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
++ L A L+ ML P+ T+ L+ C GE A M +M G++P
Sbjct: 132 EKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP---- 187
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+ + +I++G C V+EA + M E PD +S +V++GFC+ L +A
Sbjct: 188 ----CVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEA 243
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
VW + ++ + ++YASLINA+ + +M +G
Sbjct: 244 LSF--------VWMIKNDGFSL------NRNSYASLINAFFKARRYREAHACYTKMFKEG 289
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
+PD V+ ++
Sbjct: 290 IVPDVVLYAI-------------------------------------------------- 299
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+++ S G V EAA+ + M + PD YN +I C +++A ++ +E+
Sbjct: 300 ---MIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEIS 356
Query: 420 RYGFVSH 426
+ +H
Sbjct: 357 EHNVCTH 363
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 37/250 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D +YN +++ CL + + M ++ + PD SYR ++ C A +
Sbjct: 181 DTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLF 240
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+M KG +PD+FTY++L+ +LC K++L EAY L M PD + + T++ C E
Sbjct: 241 EDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCRE 300
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G A + M G LP+ V+ GFSP
Sbjct: 301 GRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVI 360
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE-------LRKAYE 241
+A++ G C +GR+EEA G+L E +P +++I++ C+ + L + +
Sbjct: 361 HALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLK 420
Query: 242 LKVEMDRKVV 251
++++ D ++V
Sbjct: 421 IEIKGDTRIV 430
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 11/188 (5%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
+ + + G+ PD SY ++ FC N AY +M ++ ++PD +Y L+QALC
Sbjct: 169 LFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALC 228
Query: 122 SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
K +++ A LF++ML+ PD T+TTL+++ C + + +A+ + +M KG PD V
Sbjct: 229 RKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 288
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
YN +I G C GR +A ++ M G P+ VSY +++G C L +
Sbjct: 289 --------HYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDE 340
Query: 239 AYELKVEM 246
A + EM
Sbjct: 341 ATKYVEEM 348
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 46/344 (13%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
+ + + ++P SY I G N P KA M Q I P + ++ L S
Sbjct: 102 KSESSQPITPTLFSYLIKIYGEAN--LPDKALNTFYIMLQFNIKPLTKHLNRILDILVSH 159
Query: 124 RR-LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
R L A+ LF++ PD ++ LM A CL G+ S A+ + ++M + V+PD
Sbjct: 160 RNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPD--- 216
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+ +Y ++ LC +V A+ + M G PD+ +Y +++ C+ ++LR+A
Sbjct: 217 -----IQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREA 271
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
Y+L M V G + D Y ++I +C +G + D+M G
Sbjct: 272 YKLLCRMK---VKGCN-----------PDIVHYNTVILGFCREGRAHDACKVIDDMQANG 317
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
LP+ V L+NGL HL ++ Y + ++ + F
Sbjct: 318 CLPNLVSYRTLVNGL----------CHLGMLDEATKYV--------EEMLSKGFSPHFAV 359
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHC 403
+ LVK F G + EA LE P + +++ C
Sbjct: 360 IHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQIC 403
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 33/352 (9%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG---LSPDALSYRYVIT 83
F+ A S + Y +IK M++ G++ M + +SP + ++
Sbjct: 135 FSWASKQTSYRHSQEVYKAMIKVLSKMRQFGAVWGLIDEMRVENSELISPQV--FVILMR 192
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP--PD 141
F + R KA E EM + G D + + L+ ALC + EA LF++M P
Sbjct: 193 RFASARMVSKAIEVLDEMPKYGCEVDEYVFGCLLDALCKNGSVKEAASLFEDMRYKFTPT 252
Query: 142 DITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRV 201
FT+L++ C EG+ +A H+ QM G+ PD V +N ++ G G++
Sbjct: 253 VKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVV--------FNNLLGGYAQAGKM 304
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
+A +L+ M G P+A SY ++I C++ +L +A + VEM R
Sbjct: 305 GDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGC---------- 354
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
D TY +LI+ +C G++ + L D+M +G P+ + ++ +KK +
Sbjct: 355 ----QMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELE 410
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIE-NCSNNEFKSVVGLVKSFSMRGL 372
+ + L+ +P+ IY+ +I C E K V L GL
Sbjct: 411 EC---MELVNEMQKIGCVPDLNIYNIVIRLACKLGEVKQGVRLWNEMEASGL 459
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 4 LRDSFTATLKTFRHMV----RNGVVCR---FTAARNSESIQQDLATYNKIIKQHCLMQRV 56
+R FT T+K F ++ + G + I+ D+ +N ++ + ++
Sbjct: 245 MRYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKM 304
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSL 116
+L+ M KG P+A SY +I C + +A +EM + G D TY++L
Sbjct: 305 GDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTL 364
Query: 117 IQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
I C ++ Y L +M P+ +T+ +M A + E + + ++M G
Sbjct: 365 ISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGC 424
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+PD L YN +I C LG V++ + + M GL+P +++I+I+GF +
Sbjct: 425 VPD--------LNIYNIVIRLACKLGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQ 476
Query: 234 RELRKAYELKVEM 246
L +A E EM
Sbjct: 477 ECLVEACEFFKEM 489
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 183/427 (42%), Gaps = 48/427 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D T+ ++K CL R+ +G +L+ + G++P+ + Y ++ C N G+A
Sbjct: 173 VRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRAR 232
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
EM + P+ T++ LI + + L +A L ++ + PD +T T ++
Sbjct: 233 SLMNEM----VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEIL 288
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C G ++A + ++ G D V YN +I G C +G+V+ L L+ M
Sbjct: 289 CNAGRVTEAAEVLERVESLGGSLDAV--------AYNTLIKGFCGVGKVKVGLHFLKQME 340
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
G P+ +Y I+I GFC++R L A +L +M D + ++ T+
Sbjct: 341 NKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKT------DGINRNFV--------TF 386
Query: 273 ASLINAYCAQGEL---FKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL-- 327
++I C++G + F +L L +E + +GS + +I GL K+ R + L
Sbjct: 387 DTMIRGLCSEGRIEDGFSILELMEE-TKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAK 445
Query: 328 ------------LLIIADYMYTSMPNYI-IYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
+ II ++ + IYD +I+ LV FS G +
Sbjct: 446 MGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIR 505
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
EA + M+ N P + +N +I + C + + A ++ G V + + L+
Sbjct: 506 EAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLI 565
Query: 435 TALRDHG 441
L G
Sbjct: 566 DVLCRKG 572
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 195/453 (43%), Gaps = 44/453 (9%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
+ M E G+ D ++ ++ G C G+ ++ + G+ P+ Y++L+ ALC
Sbjct: 166 KSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRN 225
Query: 124 RRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
++ A L EM+ P +++TF L+ + E +A + + ++PD VT
Sbjct: 226 GKVGRARSLMNEMVDP-NEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVT---- 280
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
++ LC GRV EA +L + +G S DAV+Y +I GFC +++
Sbjct: 281 ----VTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFL 336
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
+M+ K Y L + DTY LI +C L L L ++M G +
Sbjct: 337 KQMENK----------GY----LPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRN 382
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLI----IADYMYTSMPNYIIYDTLIENCSN--NEF 357
V +I GL + R +D + L L+ + S N IIY +N + +EF
Sbjct: 383 FVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEF 442
Query: 358 KSVVGLV------KSFSM-----RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRL 406
+ +G + +S ++ G + +A +D M++ P VYN L+ +
Sbjct: 443 LAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHG 502
Query: 407 NVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQN-TLRSCNLNDSELH 465
++ +A + EM+ + A++T + G +++ T R C + ++E +
Sbjct: 503 SIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGC-VPNTETY 561
Query: 466 KVLNEIDTRKFPPIGATLLDVLAEIAMDGLLLD 498
L ++ RK A L V E+ G+L D
Sbjct: 562 SPLIDVLCRKGDIQKA--LQVFLEMVEKGILPD 592
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 64/308 (20%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D YN +IK C + +V+ G+ L+ M KG P+ +Y +I GFC +R A +
Sbjct: 312 DAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLF 371
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----------LSPPDDITF--- 145
+M GI + T+ ++I+ LCS+ R+ + + + + M +SP + I +
Sbjct: 372 NDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLF 431
Query: 146 --------------------------TTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
T++ C EG A +++ +MI +G +
Sbjct: 432 KQNRFDEASEFLAKMGKLFPRAVDRSMTIIQK-CKEGAIEDAKNIYDKMIDEGGI----- 485
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
P++ YN+++HG G + EA+ ++ M P A ++ +I+ FC+ ++ A
Sbjct: 486 ---PSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESA 542
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQG-LSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
+ ++++T +G + + +TY+ LI+ C +G++ K L + EM K
Sbjct: 543 LKF-----------MEDIT----ARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEK 587
Query: 299 GSLPDSVI 306
G LPD I
Sbjct: 588 GILPDQCI 595
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 173/423 (40%), Gaps = 51/423 (12%)
Query: 9 TATLKTFRH-MVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMA 67
T T H + RNG V R + N E + + T+N +I + + + + + +L
Sbjct: 212 TVIYNTLLHALCRNGKVGRARSLMN-EMVDPNEVTFNILISSYYKEENLVQALVLLEKCF 270
Query: 68 EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLS 127
L PD ++ V+ CN +A E ++ G DA Y++LI+ C ++
Sbjct: 271 ALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVK 330
Query: 128 EAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPA 184
H ++M + P+ T+ L++ C A + + M G+ +FV
Sbjct: 331 VGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFV------ 384
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEM--GLSPDAVSYIIVISGFCQNRELRKAYEL 242
T++ +I GLC GR+E+ IL M E G Y +I G + +A E
Sbjct: 385 --TFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEF 442
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
+M + +D + I C +G + + D+M +G +P
Sbjct: 443 LAKMGKLFPRAVDR----------------SMTIIQKCKEGAIEDAKNIYDKMIDEGGIP 486
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLI-ENCSNNEFKSVV 361
++ + L++G + ++ + +I++ + P ++ +I E C + +S +
Sbjct: 487 SILVYNSLVHGFSQHGSIREAVELINEMISNNCF---PIASTFNAIITEFCEQGKIESAL 543
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
++ + RG V P+ Y+ LI CR+ ++ KA +++EMV
Sbjct: 544 KFMEDITARGCV----------------PNTETYSPLIDVLCRKGDIQKALQVFLEMVEK 587
Query: 422 GFV 424
G +
Sbjct: 588 GIL 590
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 86 CNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
C + A++ EM GI P+ TY++LI C +L EA LF++M+S P+
Sbjct: 2 CKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNV 61
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
TF L+ A C EG+ +A ++ + M+ K + D V Y+++++G C + V
Sbjct: 62 YTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVV--------AYSSLMNGYCLVNEVF 113
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+A I + M E LS D SY I+I+ FC+ + + +A +L EM K ++
Sbjct: 114 KAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIF---------- 163
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D TY +LI+ C G L + L DEM +G P+ +
Sbjct: 164 ----PDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNII 202
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 19/191 (9%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYE----FKLEMDQKGILPDAFTYSSLIQALC 121
M G+SP+ ++Y +I GFC GK E FK +M + I P+ +T++ L+ A C
Sbjct: 17 MVASGISPNVVTYTALIDGFC---VVGKLEEALGLFK-KMISENINPNVYTFNGLVDAFC 72
Query: 122 SKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
+ ++ EA ++ M+ D + +++LM+ CL E KA + M + + D
Sbjct: 73 KEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYD-- 130
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
+ +YN +I+ C + V+EA+ + MP + PD V+Y +I G C++ L
Sbjct: 131 ------VRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSY 184
Query: 239 AYELKVEMDRK 249
A EL EMD +
Sbjct: 185 AMELVDEMDDR 195
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+ I ++ TY +I C++ ++E+ +G+ + M + ++P+ ++ ++ FC
Sbjct: 19 ASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIE 78
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLM 149
+A M +K + D YSSL+ C + +A +F+ M D ++ ++
Sbjct: 79 EAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMI 138
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C +A + +M K + PD V TY+ +I GLC GR+ A+ ++
Sbjct: 139 NEFCKMKMVDEAIKLFEEMPLKQIFPDVV--------TYHTLIDGLCKSGRLSYAMELVD 190
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRE 235
M + G P+ ++Y ++ C+N +
Sbjct: 191 EMDDRGEPPNIITYCPIVDVLCKNHD 216
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + AF ++++M+ G+ SP + TY A+I G C +G++EEALG+ + M
Sbjct: 2 CKDTFVNDAFDLYYEMVASGI--------SPNVVTYTALIDGFCVVGKLEEALGLFKKMI 53
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----- 267
++P+ ++ ++ FC+ ++ +A + M K + D V Y+ LM G
Sbjct: 54 SENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKS-DVVAYSSLMNGYCLVNEV 112
Query: 268 -----------------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
D +Y +IN +C + + + L +EM K PD V L
Sbjct: 113 FKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTL 172
Query: 311 INGLDKKAR 319
I+GL K R
Sbjct: 173 IDGLCKSGR 181
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 29/284 (10%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q ++ +N ++ C VE+ G+ + M +K ++P+ +Y ++ G+C R P + +
Sbjct: 186 QPEINAFNFLLDALCKCCLVEEAEGLYKRMRKK-INPNGDTYNILVFGWCRVRNPSRGMK 244
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM------LSPPDDITFTTLMH 150
EM Q G PD FTY++ + C + +++A LF+ M +S P +++ L+
Sbjct: 245 VLEEMIQLGHKPDNFTYNTALDTYCKEGMITDAVELFEFMRTKGSIISSPTAKSYSILIV 304
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
A + F MI G LPD TY II G+C G+++EA L
Sbjct: 305 ALVQNDRMEECFKFMGHMISSGCLPDVT--------TYKDIIEGMCLCGKIDEAYKFLEE 356
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + G PD V++ + C N++ +A +L M + +
Sbjct: 357 MGKKGYPPDIVTHNCFLKVLCHNKKSEEALKLYGRMIE--------------LSCIPSVQ 402
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
TY LI+ + + EM +G PD+ ++I GL
Sbjct: 403 TYNMLISMFFKMDDPDGAFETWHEMEKRGCRPDTDTYGVMIEGL 446
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 29/288 (10%)
Query: 31 RNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRC 90
R + I + TYN ++ C ++ +G+ +L M + G PD +Y + +C
Sbjct: 214 RMRKKINPNGDTYNILVFGWCRVRNPSRGMKVLEEMIQLGHKPDNFTYNTALDTYCKEGM 273
Query: 91 PGKAYEFKLEMDQKGIL---PDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDIT 144
A E M KG + P A +YS LI AL R+ E + M+S PD T
Sbjct: 274 ITDAVELFEFMRTKGSIISSPTAKSYSILIVALVQNDRMEECFKFMGHMISSGCLPDVTT 333
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+ ++ CL G+ +A+ +M KG PD V T+N + LC + EEA
Sbjct: 334 YKDIIEGMCLCGKIDEAYKFLEEMGKKGYPPDIV--------THNCFLKVLCHNKKSEEA 385
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
L + M E+ P +Y ++IS F + + A+E EM+++ D TY +++
Sbjct: 386 LKLYGRMIELSCIPSVQTYNMLISMFFKMDDPDGAFETWHEMEKRGCRP-DTDTYGVMIE 444
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG-SLPDSVIDSLLI 311
GL + C + E L +E+ +KG LP DSLL+
Sbjct: 445 GLFN-----------CNKAE--DACILLEEVINKGIKLPYRKFDSLLM 479
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 35/277 (12%)
Query: 16 RHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG-L 71
R + R G + C+ S D+ TYN II C + V++ L + G +
Sbjct: 221 RGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSFLNEVCLNGQV 280
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
+PD +SY +I+G+C +A EM + G +P+AFT+++LI ++ +
Sbjct: 281 APDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLA 340
Query: 132 LFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF------VTGFS 182
++ +ML PD +TFT+L++ + G+ A M ++M + V V GF
Sbjct: 341 MYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFC 400
Query: 183 ---------------------PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
P F YN +I G C G V+EA IL M E PD +
Sbjct: 401 KNNRLHEARDILTRLKQSDVVPQSFVYNPVIDGYCKSGNVDEANKILAEMEENRCKPDKL 460
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
+Y I+I G C + +A + +M V DE+T
Sbjct: 461 TYTILIIGHCSKGRMAEAIGIFDKM-LAVCCAPDEIT 496
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 53/442 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ + TYN +++ C + M G PD+ ++++ + +
Sbjct: 104 MNHNYWTYNMLLRSLCETNHHRSAKLVYDWMRFDGQVPDSWLLGFLVSSYALIGRFDVSK 163
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
E +++ + + Y+ L L K + EA LF E++ P T LM
Sbjct: 164 ELLVDVQCNNVGVNVVVYNDLFNILIIKNKAREAVDLFWELVRLRYCPVTYTINILMRGL 223
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C GE +A + G L F G SP + TYN IIHG C + V+ A L +
Sbjct: 224 CRAGEIDEACKL------LGDLRSF--GCSPDVITYNTIIHGFCRISEVDRARSFLNEVC 275
Query: 213 EMG-LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL----- 266
G ++PD VSY +ISG+C+ +++A L EM R + T+ L+ G
Sbjct: 276 LNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMP-NAFTFNALIDGFVKLGD 334
Query: 267 -----------------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
D T+ SLIN Y G++ L + +EM+ + S+
Sbjct: 335 MASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSV 394
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSM 369
L+NG K R + + L + + +P +Y+ +I+ G KS
Sbjct: 395 LVNGFCKNNRLHEARDILTRLKQSDV---VPQSFVYNPVID-----------GYCKS--- 437
Query: 370 RGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
G V+EA + M E KPD Y +LI HC + + +A ++ +M+ +
Sbjct: 438 -GNVDEANKILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAVCCAPDEIT 496
Query: 430 VLALLTALRDHGMYNERSWVIQ 451
+ L + L GM E + V Q
Sbjct: 497 INNLRSCLLKAGMPAEAARVKQ 518
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
NS + L T++ ++ C R+ + IL + + + P + Y VI G+C +
Sbjct: 381 NSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVIDGYCKSGNV 440
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A + EM++ PD TY+ LI CSK R++EA +F +ML+ PD+IT L
Sbjct: 441 DEANKILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAVCCAPDEITINNL 500
Query: 149 MHACCLEGEFSKAFHMHHQMIHK 171
G ++A + + HK
Sbjct: 501 RSCLLKAGMPAEAARVKQALCHK 523
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 78 YRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
Y +I C + A++ EM K I D FTY++LI + +L++A LF +M
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMT 61
Query: 138 SP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHG 194
+ PD TF L+ C +G +A ++ MI + P + TY++++ G
Sbjct: 62 AENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDI--------KPRVVTYSSLMDG 113
Query: 195 LCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-RKVVWG 253
C + V +A I M G+ + SY +I+GFC+ + + +A L EM RK++
Sbjct: 114 YCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRN 173
Query: 254 LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
+ + Y++L+ GL C G + L L DEM +G P+ VI S +++
Sbjct: 174 V--LIYSFLIDGL-------------CKSGRISYALKLVDEMHDRGQPPNIVIYSSILDA 218
Query: 314 LDKKARTKDTKA 325
L K R A
Sbjct: 219 LCKNHRVDQAIA 230
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I D+ TYN +I + ++ +G+ M + ++PD ++ ++ GFC +
Sbjct: 27 AKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVK 86
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
+A M + I P TYSSL+ C +++A +F M + + ++TT++
Sbjct: 87 EAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMI 146
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ C +A ++ +M + ++ + + Y+ +I GLC GR+ AL ++
Sbjct: 147 NGFCKIKMVDEAINLFEEMRCRKIIRN--------VLIYSFLIDGLCKSGRISYALKLVD 198
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
M + G P+ V Y ++ C+N + +A L V+
Sbjct: 199 EMHDRGQPPNIVIYSSILDALCKNHRVDQAIALSVD 234
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 122/267 (45%), Gaps = 40/267 (14%)
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+TT++ + C + AF ++ +M+ K + D +FTYNA+I G + ++ +A
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLD--------VFTYNALISGFSAVSKLNDA 53
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ 264
+G+ M ++PD ++ I++ GFC++ +++A + M + D++ +
Sbjct: 54 IGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIK------DDIKPRVV-- 105
Query: 265 GLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
TY+SL++ YC E+ K + D M+ +G + + + +ING + K
Sbjct: 106 ------TYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGF---CKIKMVD 156
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
+ L + N +IY LI+ GL KS G ++ A + D M
Sbjct: 157 EAINLFEEMRCRKIIRNVLIYSFLID-----------GLCKS----GRISYALKLVDEMH 201
Query: 385 EGNYKPDGAVYNLLIFDHCRRLNVHKA 411
+ P+ +Y+ ++ C+ V +A
Sbjct: 202 DRGQPPNIVIYSSILDALCKNHRVDQA 228
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 34/197 (17%)
Query: 223 YIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQ 282
Y +I C+ + + A++L EM K + GLD TY L+ G S A
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRI-GLDVFTYNALISGFS-------------AV 47
Query: 283 GELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
+L + L ++M+ + PD ++L++G K R K+ K L ++I D + P
Sbjct: 48 SKLNDAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDI---KPRV 104
Query: 343 IIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFD 401
+ Y +L++ C NE + S + RG++ +++ TM+ G
Sbjct: 105 VTYSSLMDGYCLINEVNKAKEIFDSMAARGVMANV-QSYTTMING--------------- 148
Query: 402 HCRRLNVHKAYNMYMEM 418
C+ V +A N++ EM
Sbjct: 149 FCKIKMVDEAINLFEEM 165
>Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3110709-3109039 | 20130731
Length = 508
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 156/348 (44%), Gaps = 39/348 (11%)
Query: 44 NKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL-EMD 102
N++I QH +V+ + + + + GL P+ +Y VI G C N K E+ EM+
Sbjct: 82 NRLI-QH---DKVKMALEVYKEIKRVGLCPNHHTYAIVIKGLCKNSDDLKHVEYVFDEME 137
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFS 159
+ G+ P+++ Y++ I+ LC Y L + +P + + + C E +
Sbjct: 138 EAGVTPNSYCYAAYIEGLCKNNMSDVGYKLLERCRASNAPIEVYAYAAAIRGFCNEMKLD 197
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
KA + + M G++PDF Y+ + G C G+ E + + + + + L D
Sbjct: 198 KAEDVFYDMKSWGLVPDF--------HVYSPLTRGYCETGKDSEVVDLFKEIKQSCLFLD 249
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAY 279
V+Y IV+ C+ ++ A V L+E+T M D Y +LIN Y
Sbjct: 250 GVAYNIVLDSLCKLGKVDDA-----------VSTLEELTS---MNIDLDIKHYTTLINGY 295
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM 339
C QG+ + L EM KG PD V ++L GL +K D++ LLI D
Sbjct: 296 CLQGKTVEAQCLFKEMEEKGFKPDVVAYNVLAAGLFRK--DLDSEVIDLLIYMDSQGVK- 352
Query: 340 PNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEG 386
PN + +IE CS + VG +++ R + NE+ + M+ G
Sbjct: 353 PNSTTHKIIIEGYCSVGK----VGEAEAYFNR-MKNESVELYTAMVNG 395
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 129/319 (40%), Gaps = 50/319 (15%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ Y I+ C +++K + M GL PD Y + G+C + +
Sbjct: 179 EVYAYAAAIRGFCNEMKLDKAEDVFYDMKSWGLVPDFHVYSPLTRGYCETGKDSEVVDLF 238
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDIT---FTTLMHACCLE 155
E+ Q + D Y+ ++ +LC ++ +A +E+ S D+ +TTL++ CL+
Sbjct: 239 KEIKQSCLFLDGVAYNIVLDSLCKLGKVDDAVSTLEELTSMNIDLDIKHYTTLINGYCLQ 298
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G+ +A + +M KG PD V G P T+
Sbjct: 299 GKTVEAQCLFKEMEEKGFKPDVVAYNVLAAGLFRKDLDSEVIDLLIYMDSQGVKPNSTTH 358
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL------ 242
II G C +G+V EA M + Y +++G+C+ + K+Y+L
Sbjct: 359 KIIIEGYCSVGKVGEAEAYFNRMKNESVEL----YTAMVNGYCEANLIEKSYDLFLSCQT 414
Query: 243 ------KVEMDRKVVWGLDEVTYA---YLMQGLS-DEDTYASLINAYCAQGELFKVLTLD 292
KV + R + W ++ ++ +G + TY +I YC L + L
Sbjct: 415 KDIFQQKVLVLRNLAWNMERARSLFDFFIGRGFTLGVVTYTVMIKGYCRMNCLQEAYDLF 474
Query: 293 DEMSHKGSLPDSVIDSLLI 311
+M +G P+ V ++L+
Sbjct: 475 QDMKRRGIQPNVVTYTVLL 493
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S +I D+ Y +I +CL + + + + M EKG PD ++Y + G
Sbjct: 278 SMNIDLDIKHYTTLINGYCLQGKTVEAQCLFKEMEEKGFKPDVVAYNVLAAGLFRKDLDS 337
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+ + + MD +G+ P++ T+ +I+ CS ++ EA F M + ++ +T +++
Sbjct: 338 EVIDLLIYMDSQGVKPNSTTHKIIIEGYCSVGKVGEAEAYFNRMKNESVEL-YTAMVNGY 396
Query: 153 CLEGEFSKAFHMHHQMIHKGV--------------------LPDFVT--GFSPALFTYNA 190
C K++ + K + L DF GF+ + TY
Sbjct: 397 CEANLIEKSYDLFLSCQTKDIFQQKVLVLRNLAWNMERARSLFDFFIGRGFTLGVVTYTV 456
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVI 227
+I G C + ++EA + + M G+ P+ V+Y +++
Sbjct: 457 MIKGYCRMNCLQEAYDLFQDMKRRGIQPNVVTYTVLL 493
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 154/397 (38%), Gaps = 56/397 (14%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y I+ C + G +L + +Y I GFCN KA + +M
Sbjct: 148 YAAYIEGLCKNNMSDVGYKLLERCRASNAPIEVYAYAAAIRGFCNEMKLDKAEDVFYDMK 207
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFS 159
G++PD YS L + C + SE LF+E+ D + + ++ + C G+
Sbjct: 208 SWGLVPDFHVYSPLTRGYCETGKDSEVVDLFKEIKQSCLFLDGVAYNIVLDSLCKLGKVD 267
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
A ++ + D + Y +I+G C G+ EA + + M E G PD
Sbjct: 268 DAVSTLEELTSMNIDLD--------IKHYTTLINGYCLQGKTVEAQCLFKEMEEKGFKPD 319
Query: 220 AVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINA 278
V+Y ++ +G + + +L + MD QG+ + T+ +I
Sbjct: 320 VVAYNVLAAGLFRKDLDSEVIDLLIYMDS---------------QGVKPNSTTHKIIIEG 364
Query: 279 YCAQGELFKVLTLDDEMSHKG-SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
YC+ G++ + + M ++ L ++++ L +K+
Sbjct: 365 YCSVGKVGEAEAYFNRMKNESVELYTAMVNGYCEANLIEKS------------------- 405
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
YD + + + F+ V ++++ + + A D + + Y +
Sbjct: 406 -------YDLFLSCQTKDIFQQKVLVLRNLAWN--MERARSLFDFFIGRGFTLGVVTYTV 456
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALL 434
+I +CR + +AY+++ +M R G ++ + LL
Sbjct: 457 MIKGYCRMNCLQEAYDLFQDMKRRGIQPNVVTYTVLL 493
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 119/323 (36%), Gaps = 60/323 (18%)
Query: 128 EAYHLFQEMLSPPDDI-----------TFTTLMHACCLEGEFSKAFHM--HHQMIHKGVL 174
E + LF+++L D + F AC F AF H Q+ +L
Sbjct: 12 EIHDLFEKLLEGVDVVENKKHYLAILRAFDVFAKACVGLNMFDGAFDFLFHFQVTRFEIL 71
Query: 175 PDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNR 234
P V N +I+ L +V+ AL + + + +GL P+ +Y IVI G C+N
Sbjct: 72 PSIVAC--------NFLINRLIQHDKVKMALEVYKEIKRVGLCPNHHTYAIVIKGLCKNS 123
Query: 235 ELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED----------------------TY 272
+ K E + + + YA ++GL + Y
Sbjct: 124 DDLKHVEYVFDEMEEAGVTPNSYCYAAYIEGLCKNNMSDVGYKLLERCRASNAPIEVYAY 183
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
A+ I +C + +L K + +M G +PD + S L G + + + I
Sbjct: 184 AAAIRGFCNEMKLDKAEDVFYDMKSWGLVPDFHVYSPLTRGYCETGKDSEVVDLFKEIKQ 243
Query: 333 DYMYTSMPNY-IIYD-------------TLIENCSNN---EFKSVVGLVKSFSMRGLVNE 375
++ Y I+ D TL E S N + K L+ + ++G E
Sbjct: 244 SCLFLDGVAYNIVLDSLCKLGKVDDAVSTLEELTSMNIDLDIKHYTTLINGYCLQGKTVE 303
Query: 376 AARAHDTMLEGNYKPDGAVYNLL 398
A M E +KPD YN+L
Sbjct: 304 AQCLFKEMEEKGFKPDVVAYNVL 326
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 184/451 (40%), Gaps = 68/451 (15%)
Query: 19 VRNGV-----VCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP 73
VR+G+ + F A E YN++I ++ + ++ M +G+
Sbjct: 117 VRHGIPFLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRI 176
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
++ ++ + +A M+ G PD ++S +I +LC KRR SEA F
Sbjct: 177 TVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFF 236
Query: 134 QEMLSP--PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
+ PD I +T+L+H C G+ +KA + M GV P+ ++TY+ +
Sbjct: 237 DSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPN--------VYTYSIV 288
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
I LC G++ A + M + G P+AV++ ++ + K ++ +M R
Sbjct: 289 IDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKR--- 345
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD-SVIDSLL 310
+ +D +Y LI ++C L + + + D M KG P+ S +S+
Sbjct: 346 -----------LGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIF 394
Query: 311 --------INGLDKK-ARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVV 361
+NG + A+ K+ K MPN + Y+ L+
Sbjct: 395 GCIAELHDVNGAHRMYAKMKELKC-------------MPNTLTYNILM------------ 429
Query: 362 GLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRY 421
+ F+ ++ + M E +P+ Y +LI C + + + AYN+ EMV
Sbjct: 430 ---RMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEE 486
Query: 422 GFVSHMFSVL-ALLTALRDHGMYNERSWVIQ 451
+ S+ +L LR+ G + +++
Sbjct: 487 KCLKPNLSIYETVLELLRNAGQLKKHEELVE 517
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 162/375 (43%), Gaps = 36/375 (9%)
Query: 11 TLKTF----RHMVRNGVVCRFTAARN---SESIQQDLATYNKIIKQHCLMQRVEKGVGIL 63
T+ TF R VR G+ A N + D +++ +I C +R +
Sbjct: 177 TVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFF 236
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
+ K PD + Y ++ G+C KA E +M + G+ P+ +TYS +I +LC
Sbjct: 237 DSLKHK-FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRC 295
Query: 124 RRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
+++ A+ +F EM+ P+ +TF +LM G K +++QM G D +
Sbjct: 296 GQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTI-- 353
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
+YN +I C ++EA+ +L M + G++P+A ++ + + ++ A+
Sbjct: 354 ------SYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAH 407
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS 300
+ +M +++ + +TY LM+ +D + + VL L EM
Sbjct: 408 RMYAKM-KELKCMPNTLTYNILMRMFADSKS-------------IDMVLKLKKEMDESEV 453
Query: 301 LPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN-NEFKS 359
P+ +LI +K + + ++ + PN IY+T++E N + K
Sbjct: 454 EPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLK--PNLSIYETVLELLRNAGQLKK 511
Query: 360 VVGLVKSFSMRGLVN 374
LV+ RG V+
Sbjct: 512 HEELVEKMVARGFVS 526
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 44/318 (13%)
Query: 12 LKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQ-RVEKGVGILRGMAEKG 70
LKTF M + G ++ ++ +NK+I C + VEK + M +
Sbjct: 176 LKTFERMEKYG-------------LKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWN 222
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
L P+ SY +I G+ + K E EM G PD TY +I A C ++ EA
Sbjct: 223 LEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAI 282
Query: 131 HLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
++ +MLS P + T + +AF + +GF P T
Sbjct: 283 GIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEK--------SKASGFPPEAPT 334
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
YNA++ C+ R+++A I+ M E+G+ P+A +Y I++ + ++AY + M
Sbjct: 335 YNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMS 394
Query: 248 RKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
+ G + TYA ++ +C + +L + + +EM KG LP +
Sbjct: 395 SET--GCEPSV-----------STYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMF 441
Query: 308 SLLI------NGLDKKAR 319
S LI N LD R
Sbjct: 442 STLIISLCHENKLDDACR 459
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F + + TYN ++ +C R++ I+ M E G+ P+A +Y ++
Sbjct: 319 FFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLI 378
Query: 87 NNRCPGKAYE-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDD 142
+AY F+ + G P TY+ +++ C++ +L A ++ EM P
Sbjct: 379 KGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGI 438
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP--DFVTGFSPALFTY---NAIIHGLCF 197
F+TL+ + C E + A QM+ G+ P + + F AL N +IH F
Sbjct: 439 HMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVIH---F 495
Query: 198 LGRVEEALGILRGMP 212
+V++ LR P
Sbjct: 496 AKKVDK----LRNTP 506
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 185/464 (39%), Gaps = 69/464 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TYN ++ +R ++ + +L+ M G SP ++Y +I+ +A K
Sbjct: 346 DRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLK 405
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
++M +KGI PD FTY++L+ + A+ ++ EM + P+ TF L+
Sbjct: 406 VQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNR 465
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G F + + ++ G PD VT GF P T+
Sbjct: 466 GMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTF 525
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N +I G ++A+ + + M E G+SPD +Y V++ R
Sbjct: 526 NTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALA----------------R 569
Query: 249 KVVWGLDEVTYAYLMQGL--SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL---PD 303
W E A + G +E TY+SL++AY E+ ++ L +E+ + GS+ P
Sbjct: 570 GGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEI-YSGSIETHPV 628
Query: 304 SVIDSLLING--------------LDKKARTK--DTKAHLLLIIADYMYTSMPNYIIYDT 347
+ +L++ L ++ T T ++ I S N I+ +
Sbjct: 629 LLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEIL-NF 687
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
+ EN + L+ +S ++ +L+ KPD YN +I+ +CR
Sbjct: 688 MYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGR 747
Query: 408 VHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
+ +A M+ EM V ++ + + M+ E VI+
Sbjct: 748 MKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIR 791
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 162/405 (40%), Gaps = 54/405 (13%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
RV +L+ + G D +Y +IT + + A +M + G P TY+
Sbjct: 221 RVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYN 280
Query: 115 SLIQAL----CSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE-FSKAFHMHHQMI 169
S++ S R++ + + PD T+ TL+ CC G + + ++ Q+
Sbjct: 281 SILNVYGKMGMSWSRVTAIFDSMKTNGVVPDLYTYNTLI-TCCRRGSLYEEVVNVFDQIK 339
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
G +PD TYNA++ R +EAL +L+ M G SP ++Y +IS
Sbjct: 340 SAGFVPD--------RVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISA 391
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--SDEDTYASLINAYCAQGELFK 287
+ L +A LKV+M K + D TY L+ G + +D +A F+
Sbjct: 392 HVRGGWLEEASRLKVQMVEKGI-KPDVFTYTTLLSGFEKAGKDEFA------------FE 438
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYD 346
V DEM G P+ N L K + ++ + + P+ + ++
Sbjct: 439 VY---DEMKAAGCKPNICT----FNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWN 491
Query: 347 TLIENCSNNEFKS-VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
TL+ +N+ S V G+ K G V P+ +N LI + R
Sbjct: 492 TLLAVFGHNQMDSEVAGVFKEMKRSGFV----------------PERDTFNTLISAYSRC 535
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+ +A +Y M+ G + + A+L AL G + + +I
Sbjct: 536 GSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKII 580
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 70/320 (21%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F+ M R+G F R+ T+N +I + ++ + + + M E G+SPD
Sbjct: 510 FKEMKRSG----FVPERD---------TFNTLISAYSRCGSFDQAMAVYKSMLESGVSPD 556
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+Y V+ ++ + EM P+ TYSSL+ A + + + L +
Sbjct: 557 LSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGE 616
Query: 135 EMLS------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------- 179
E+ S P T + L E +AF ++ +G+ P T
Sbjct: 617 EIYSGSIETHPVLLKTLVLVSSKSDLLMETERAFF---ELKERGITPGLTTLNAMISIYG 673
Query: 180 ------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
GF+P+L TYN++++ + +++ ILR + + G+ PD V
Sbjct: 674 RKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKV 733
Query: 222 SYIIVISGFCQNRELRKAYELKVEM---------------------DRKVVWGLDEVTYA 260
SY VI +C+N +++A + EM D V +D + Y
Sbjct: 734 SYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYM 793
Query: 261 YLMQGLSDEDTYASLINAYC 280
D++TY S+I+ YC
Sbjct: 794 IKQGCRPDQNTYNSIIDWYC 813
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I L T N +I + Q V K IL M E G +P +Y ++ + + K+
Sbjct: 658 ITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSE 717
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E E+ +KG+ PD +Y+++I A C R+ EA +F EM P+ +T+ T +
Sbjct: 718 EILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATY 777
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+ F +A + MI +G PD TYN+II C R +EA ++ +
Sbjct: 778 AADSMFVEAIDVIRYMIKQGCRPD--------QNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ E+G++P + +I+ + + KA E M + G P TY+SL+ +
Sbjct: 653 LKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDK 712
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
++ + +E+L PD +++ T+++A C G +A M +M ++P+ VT
Sbjct: 713 FQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVT--- 769
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ-NRE 235
YN + EA+ ++R M + G PD +Y +I +C+ NR+
Sbjct: 770 -----YNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQ 818
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 185/464 (39%), Gaps = 69/464 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TYN ++ +R ++ + +L+ M G SP ++Y +I+ +A K
Sbjct: 346 DRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLK 405
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
++M +KGI PD FTY++L+ + A+ ++ EM + P+ TF L+
Sbjct: 406 VQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNR 465
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G F + + ++ G PD VT GF P T+
Sbjct: 466 GMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTF 525
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N +I G ++A+ + + M E G+SPD +Y V++ R
Sbjct: 526 NTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALA----------------R 569
Query: 249 KVVWGLDEVTYAYLMQGL--SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSL---PD 303
W E A + G +E TY+SL++AY E+ ++ L +E+ + GS+ P
Sbjct: 570 GGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEI-YSGSIETHPV 628
Query: 304 SVIDSLLING--------------LDKKARTK--DTKAHLLLIIADYMYTSMPNYIIYDT 347
+ +L++ L ++ T T ++ I S N I+ +
Sbjct: 629 LLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEIL-NF 687
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
+ EN + L+ +S ++ +L+ KPD YN +I+ +CR
Sbjct: 688 MYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGR 747
Query: 408 VHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
+ +A M+ EM V ++ + + M+ E VI+
Sbjct: 748 MKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIR 791
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 162/405 (40%), Gaps = 54/405 (13%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
RV +L+ + G D +Y +IT + + A +M + G P TY+
Sbjct: 221 RVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYN 280
Query: 115 SLIQAL----CSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGE-FSKAFHMHHQMI 169
S++ S R++ + + PD T+ TL+ CC G + + ++ Q+
Sbjct: 281 SILNVYGKMGMSWSRVTAIFDSMKTNGVVPDLYTYNTLI-TCCRRGSLYEEVVNVFDQIK 339
Query: 170 HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
G +PD TYNA++ R +EAL +L+ M G SP ++Y +IS
Sbjct: 340 SAGFVPD--------RVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISA 391
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL--SDEDTYASLINAYCAQGELFK 287
+ L +A LKV+M K + D TY L+ G + +D +A F+
Sbjct: 392 HVRGGWLEEASRLKVQMVEKGI-KPDVFTYTTLLSGFEKAGKDEFA------------FE 438
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS-MPNYIIYD 346
V DEM G P+ N L K + ++ + + P+ + ++
Sbjct: 439 VY---DEMKAAGCKPNICT----FNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWN 491
Query: 347 TLIENCSNNEFKS-VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRR 405
TL+ +N+ S V G+ K G V P+ +N LI + R
Sbjct: 492 TLLAVFGHNQMDSEVAGVFKEMKRSGFV----------------PERDTFNTLISAYSRC 535
Query: 406 LNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVI 450
+ +A +Y M+ G + + A+L AL G + + +I
Sbjct: 536 GSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKII 580
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 70/320 (21%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F+ M R+G F R+ T+N +I + ++ + + + M E G+SPD
Sbjct: 510 FKEMKRSG----FVPERD---------TFNTLISAYSRCGSFDQAMAVYKSMLESGVSPD 556
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+Y V+ ++ + EM P+ TYSSL+ A + + + L +
Sbjct: 557 LSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGE 616
Query: 135 EMLS------PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT--------- 179
E+ S P T + L E +AF ++ +G+ P T
Sbjct: 617 EIYSGSIETHPVLLKTLVLVSSKSDLLMETERAFF---ELKERGITPGLTTLNAMISIYG 673
Query: 180 ------------------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
GF+P+L TYN++++ + +++ ILR + + G+ PD V
Sbjct: 674 RKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKV 733
Query: 222 SYIIVISGFCQNRELRKAYELKVEM---------------------DRKVVWGLDEVTYA 260
SY VI +C+N +++A + EM D V +D + Y
Sbjct: 734 SYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYM 793
Query: 261 YLMQGLSDEDTYASLINAYC 280
D++TY S+I+ YC
Sbjct: 794 IKQGCRPDQNTYNSIIDWYC 813
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I L T N +I + Q V K IL M E G +P +Y ++ + + K+
Sbjct: 658 ITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSE 717
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
E E+ +KG+ PD +Y+++I A C R+ EA +F EM P+ +T+ T +
Sbjct: 718 EILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATY 777
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
+ F +A + MI +G PD TYN+II C R +EA ++ +
Sbjct: 778 AADSMFVEAIDVIRYMIKQGCRPD--------QNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ E+G++P + +I+ + + KA E M + G P TY+SL+ +
Sbjct: 653 LKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDK 712
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
++ + +E+L PD +++ T+++A C G +A M +M ++P+ VT
Sbjct: 713 FQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVT--- 769
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ-NRE 235
YN + EA+ ++R M + G PD +Y +I +C+ NR+
Sbjct: 770 -----YNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQ 818
>Medtr7g085100.1 | PPR containing plant-like protein | HC |
chr7:32903829-32906178 | 20130731
Length = 585
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESI---------QQDLATYNKIIKQHCLMQR 55
++ F K+F +++ NG +ARN+E I Q D+ +Y II + +
Sbjct: 265 KNVFPLDTKSF-NIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSK 323
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
+ + + + M ++ ++PD Y VI NR +A ++M+ + PDA TY+S
Sbjct: 324 LYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNS 383
Query: 116 LIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
LI+ LC R++ EA +F ML P TF ++ E F + +M G
Sbjct: 384 LIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEE---VFELLDKMKELG 440
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+P + TY +I C +++E I M E G+ D SYI++I G
Sbjct: 441 C--------NPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFL 492
Query: 233 NRELRKAYELKVEMDRK 249
N ++ +AY+ +EM K
Sbjct: 493 NCKVEEAYKYYIEMQEK 509
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 163/424 (38%), Gaps = 70/424 (16%)
Query: 19 VRNGVVCRFT---AARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM-----AEKG 70
VRN FT A + Y+ +I M+R + ++ M E
Sbjct: 141 VRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESI 200
Query: 71 LSPDALSYRYVITGFCNNRCPGKA----YEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
++P L +I +C G+A Y FK Q G+ + + L+ ALC + +
Sbjct: 201 VTPQTLLI--MIRKYCAVHDVGRAINTFYAFKRFNFQVGL----YEFQGLLSALCRYKNV 254
Query: 127 SEAYHLF--QEMLSPPDDITFTTLMHACC-LEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A HL + + P D +F +++ C L A + +M + + D V
Sbjct: 255 QDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVV----- 309
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
+Y +II ++ L + M + ++PD Y VI +NR +++A L
Sbjct: 310 ---SYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLI 366
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
++M+ V D TY SLI C K +D+
Sbjct: 367 IKMEDNNV--------------TPDAITYNSLIKPLC------KARKIDE--------AK 398
Query: 304 SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGL 363
+ + +L G+ RT +L + + + + D + E N ++ + L
Sbjct: 399 EIFNVMLERGISPSIRTFHAFFRILRVKEEV-------FELLDKMKELGCNPTIETYIML 451
Query: 364 VKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI---FDHCRRLNVHKAYNMYMEMVR 420
++ F ++E R + M E D + Y +LI F +C+ V +AY Y+EM
Sbjct: 452 IRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCK---VEEAYKYYIEMQE 508
Query: 421 YGFV 424
GF+
Sbjct: 509 KGFL 512
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 166/423 (39%), Gaps = 81/423 (19%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEM---------LSPPDDITFTTLMHACCLEGEFSKAFH 163
Y S+I L RR A+ L +EM ++P T ++ C + +A +
Sbjct: 168 YHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQ---TLLIMIRKYCAVHDVGRAIN 224
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP-DAVS 222
+ F L+ + ++ LC V++A +L + P D S
Sbjct: 225 TFYAFKR--------FNFQVGLYEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLDTKS 274
Query: 223 YIIVISGFCQ-NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCA 281
+ I+++G+C R A + EM ++ + D +YAS+I+ Y
Sbjct: 275 FNIILNGWCNLIVSARNAERIWEEMSKRRI--------------QHDVVSYASIISCYSK 320
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPN 341
+L++VL L ++M + PD + + +I L K K+ +L++ + D T P+
Sbjct: 321 SSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEA-VNLIIKMEDNNVT--PD 377
Query: 342 YIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPD----GAVYNL 397
I Y++LI K ++EA + MLE P A + +
Sbjct: 378 AITYNSLI---------------KPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRI 422
Query: 398 L--------IFDHCRRLNVHKAYNMYMEMVR-YGFVSHMFSVLALLTALRDHGMYNERS- 447
L + D + L + Y+ ++R + + V + A+R+ G+ ++RS
Sbjct: 423 LRVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSS 482
Query: 448 --WVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATLLDVLAEIAMDGLLLDGRKCSYA 505
+I +C + E +K E+ + F P T +M L GR+ + +
Sbjct: 483 YIVLIHGLFLNCKV--EEAYKYYIEMQEKGFLPEPKTE-------SMLQAWLSGRQVTDS 533
Query: 506 SAS 508
A+
Sbjct: 534 QAT 536
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TY +I++ C +++++ I M E G+ D SY +I G N +AY++ +
Sbjct: 445 IETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYI 504
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
EM +KG LP+ T S++QA S R+++++
Sbjct: 505 EMQEKGFLPEPKT-ESMLQAWLSGRQVTDS 533
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 184/448 (41%), Gaps = 57/448 (12%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S+ + + + Y +I + + + V +L M ++ +SP L+Y VI N C
Sbjct: 166 SQGVARSVFAYTAVINAYGRNGQFQTSVELLESMKQERVSPSILTYNTVI-----NACAR 220
Query: 93 KAYEFK------LEMDQKGILPDAFTYSSLIQALCSKRRLS-EAYHLFQEMLSP---PDD 142
+++ EM +GI PD TY++L+ A C+ R L EA +F+ M PD
Sbjct: 221 GGLDWEGLLGLFAEMRHEGIQPDVITYNTLLSA-CAHRGLGDEAEMVFRTMNEGGVVPDI 279
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
T++ L+H + K + +M G LPD + +YN ++ +G ++
Sbjct: 280 NTYSYLVHTFGKLNKLEKVSELLREMESGGSLPD--------VSSYNVLLEAYADMGFIK 331
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
E++G+ R M E G P++ +Y I+++ + ++ +L +EM V D
Sbjct: 332 ESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEMK---VSNTD------- 381
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
D TY LI + G +V+TL +M + P+ LI K +D
Sbjct: 382 ----PDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKGGLFED 437
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
K LL + + S K+ G+++++ L EA A +T
Sbjct: 438 AKKILLHMNEKGIVPSS------------------KAYTGVIEAYGQAALYEEALVAFNT 479
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
M E P YN L+ R + + M G + S ++ ALR G
Sbjct: 480 MNEVGSTPTVETYNSLVCSFSRGGLYKEVEAILFRMSESGLPRDVHSFNGVIEALRQAGQ 539
Query: 443 YNERSWV-IQNTLRSCNLNDSELHKVLN 469
Y E ++ +C+ N+S VL+
Sbjct: 540 YEEAVKAHVEMEKANCDPNESTFEAVLS 567
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 131/314 (41%), Gaps = 44/314 (14%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+++YN +++ + M +++ +G+ R M E G P++ +Y ++ + + +
Sbjct: 313 DVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLF 372
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
LEM PDA TY+ LIQ E LF +M+ P+ T+ L+ AC
Sbjct: 373 LEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKG 432
Query: 156 GEFSKAFHMHHQMIHKGVLPD-----------------------FVT----GFSPALFTY 188
G F A + M KG++P F T G +P + TY
Sbjct: 433 GLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETY 492
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
N+++ G +E IL M E GL D S+ VI Q + +A + VEM++
Sbjct: 493 NSLVCSFSRGGLYKEVEAILFRMSESGLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEK 552
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
D +E T+ ++++ YC+ G + + E+ G LP +
Sbjct: 553 A---NCD-----------PNESTFEAVLSIYCSAGLVDESEEQFQEIKASGILPSVMCYC 598
Query: 309 LLINGLDKKARTKD 322
+++ K R+ D
Sbjct: 599 MMLTLYTKNDRSND 612
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 178/453 (39%), Gaps = 47/453 (10%)
Query: 22 GVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYV 81
G++ F R+ E IQ D+ TYN ++ ++ + R M E G+ PD +Y Y+
Sbjct: 227 GLLGLFAEMRH-EGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYL 285
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-- 139
+ F K E EM+ G LPD +Y+ L++A + E+ +F++M
Sbjct: 286 VHTFGKLNKLEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGC 345
Query: 140 -PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
P+ T++ L++ G + + +M V+ P TYN +I
Sbjct: 346 VPNSATYSILLNLYGKHGRYDDVRDLFLEMK--------VSNTDPDAGTYNILIQVFGEG 397
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
G +E + + M + + P+ +Y +I + A ++ + M+ K +
Sbjct: 398 GYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGI------- 450
Query: 259 YAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+ Y +I AY + L + M+ GS P + L+ +
Sbjct: 451 -------VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNSLVCSFSRGG 503
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
K+ +A L + E+ + S G++++ G EA +
Sbjct: 504 LYKEVEAILF------------------RMSESGLPRDVHSFNGVIEALRQAGQYEEAVK 545
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALR 438
AH M + N P+ + + ++ +C V ++ + E+ G + + +LT
Sbjct: 546 AHVEMEKANCDPNESTFEAVLSIYCSAGLVDESEEQFQEIKASGILPSVMCYCMMLTLYT 605
Query: 439 DHGMYNERSWVIQNTLRSCNLNDSELHKVLNEI 471
+ N+ +I + + S++H+V+ ++
Sbjct: 606 KNDRSNDAYKLIDEMITT---RVSDVHQVIGQM 635
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 164/410 (40%), Gaps = 60/410 (14%)
Query: 44 NKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ 103
N +IK V + + + RGM E+ + P +Y ++ G + A M +
Sbjct: 181 NSLIKSFGNAGLVNELLFVWRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKE 240
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSK 160
PD TY+++I+ C + +A + +EM PD +++ T+M AC EG+
Sbjct: 241 GRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDF 300
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
++H+M K GF Y+ +I GLC +G+V E + M G +
Sbjct: 301 CLSLYHEMEDK--------GFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNK 352
Query: 221 VSYIIVISGFCQNRELRKAYEL--KVEMDRKVVWGL--DEVTYAYLMQGLSDEDT----- 271
Y +I + ++ A L +++MD G+ DEVTY+ ++ GL
Sbjct: 353 AVYTALIDCYGKSGNSDGALRLFERMKMD-----GIEPDEVTYSAIVNGLCKSGRVEEAL 407
Query: 272 -----------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y+SLI+ G + + + DEM+ KG PDS + LI+GL
Sbjct: 408 SYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGL 467
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
K R D A + + D ++ + I + + NE
Sbjct: 468 CKCGRIDDALALVKRMERDGCEQTVYTFTILISELFRVHRNE------------------ 509
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
EA + D M++ P+ A + L C V +A + E+ G V
Sbjct: 510 EAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMGVV 559
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 43/340 (12%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF---QEMLSPPDDITFTTLMHACCLEGE 157
M+++ I P FTY+SL+ L + A +F +E + PD +T+ T++ C G+
Sbjct: 203 MNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGK 262
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
KA M +M V P + +Y ++ G V+ L + M + G
Sbjct: 263 TRKAIEMVREM--------EVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFE 314
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
+ Y +VI G C+ ++ + Y L M R G ++ Y +LI+
Sbjct: 315 VPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKG--------------NKAVYTALID 360
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
Y G L L + M G PD V S ++NGL K R ++ ++ + +
Sbjct: 361 CYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVV 420
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
N + Y +LI+ GL K+ G V+EA + D M E PD YN
Sbjct: 421 ---NAVFYSSLID-----------GLGKA----GRVDEAEKVFDEMAEKGCPPDSYCYNA 462
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
LI C+ + A + M R G +++ L++ L
Sbjct: 463 LIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILISEL 502
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 144/345 (41%), Gaps = 29/345 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ TYN +IK +C + K + ++R M L PD +SY V+
Sbjct: 244 KPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLS 303
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
EM+ KG + YS +I LC ++ E Y LF+ M+ + +T L+
Sbjct: 304 LYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYG 363
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G A + +M G+ PD VT Y+AI++GLC GRVEEAL + E
Sbjct: 364 KSGNSDGALRLFERMKMDGIEPDEVT--------YSAIVNGLCKSGRVEEALSYFQFCNE 415
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ +AV Y +I G + + +A ++ EM K G +Y Y
Sbjct: 416 NGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEK---GCPPDSYC-----------YN 461
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI+ C G + L L M G ++LI+ L + R ++ L+I
Sbjct: 462 ALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILISELFRVHRNEEAVKMWDLMIDK 521
Query: 334 YMYTSMPNYIIYDTL-IENCSNNEFKSVVGLVKSFSMRGLVNEAA 377
+ PN + L I C + + ++ + G+V E A
Sbjct: 522 GI---TPNVACFRALSIGLCLSGKVARACKVLDELAPMGVVLETA 563
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D TY+ I+ C RVE+ + + E G+ +A+ Y +I G +
Sbjct: 381 DGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDE 440
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD---ITFTTLMH 150
A + EM +KG PD++ Y++LI LC R+ +A L + M + TFT L+
Sbjct: 441 AEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILIS 500
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+A M MI KG+ P+ + A+ GLC G+V A +L
Sbjct: 501 ELFRVHRNEEAVKMWDLMIDKGITPNVA--------CFRALSIGLCLSGKVARACKVLDE 552
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ MG+ + +Y +I C+ +++A +L
Sbjct: 553 LAPMGVVLE-TAYEDMIGALCKAGRVKEACKL 583
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 164/410 (40%), Gaps = 60/410 (14%)
Query: 44 NKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQ 103
N +IK V + + + RGM E+ + P +Y ++ G + A M +
Sbjct: 181 NSLIKSFGNAGLVNELLFVWRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKE 240
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSK 160
PD TY+++I+ C + +A + +EM PD +++ T+M AC EG+
Sbjct: 241 GRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDF 300
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
++H+M K GF Y+ +I GLC +G+V E + M G +
Sbjct: 301 CLSLYHEMEDK--------GFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNK 352
Query: 221 VSYIIVISGFCQNRELRKAYEL--KVEMDRKVVWGL--DEVTYAYLMQGLSDEDT----- 271
Y +I + ++ A L +++MD G+ DEVTY+ ++ GL
Sbjct: 353 AVYTALIDCYGKSGNSDGALRLFERMKMD-----GIEPDEVTYSAIVNGLCKSGRVEEAL 407
Query: 272 -----------------YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y+SLI+ G + + + DEM+ KG PDS + LI+GL
Sbjct: 408 SYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGL 467
Query: 315 DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVN 374
K R D A + + D ++ + I + + NE
Sbjct: 468 CKCGRIDDALALVKRMERDGCEQTVYTFTILISELFRVHRNE------------------ 509
Query: 375 EAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
EA + D M++ P+ A + L C V +A + E+ G V
Sbjct: 510 EAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMGVV 559
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 43/340 (12%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF---QEMLSPPDDITFTTLMHACCLEGE 157
M+++ I P FTY+SL+ L + A +F +E + PD +T+ T++ C G+
Sbjct: 203 MNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGK 262
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
KA M +M V P + +Y ++ G V+ L + M + G
Sbjct: 263 TRKAIEMVREM--------EVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFE 314
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
+ Y +VI G C+ ++ + Y L M R G ++ Y +LI+
Sbjct: 315 VPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKG--------------NKAVYTALID 360
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
Y G L L + M G PD V S ++NGL K R ++ ++ + +
Sbjct: 361 CYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVV 420
Query: 338 SMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNL 397
N + Y +LI+ GL K+ G V+EA + D M E PD YN
Sbjct: 421 ---NAVFYSSLID-----------GLGKA----GRVDEAEKVFDEMAEKGCPPDSYCYNA 462
Query: 398 LIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
LI C+ + A + M R G +++ L++ L
Sbjct: 463 LIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILISEL 502
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 144/345 (41%), Gaps = 29/345 (8%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D+ TYN +IK +C + K + ++R M L PD +SY V+
Sbjct: 244 KPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLS 303
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
EM+ KG + YS +I LC ++ E Y LF+ M+ + +T L+
Sbjct: 304 LYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYG 363
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G A + +M G+ PD VT Y+AI++GLC GRVEEAL + E
Sbjct: 364 KSGNSDGALRLFERMKMDGIEPDEVT--------YSAIVNGLCKSGRVEEALSYFQFCNE 415
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYA 273
G+ +AV Y +I G + + +A ++ EM K G +Y Y
Sbjct: 416 NGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEK---GCPPDSYC-----------YN 461
Query: 274 SLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
+LI+ C G + L L M G ++LI+ L + R ++ L+I
Sbjct: 462 ALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILISELFRVHRNEEAVKMWDLMIDK 521
Query: 334 YMYTSMPNYIIYDTL-IENCSNNEFKSVVGLVKSFSMRGLVNEAA 377
+ PN + L I C + + ++ + G+V E A
Sbjct: 522 GI---TPNVACFRALSIGLCLSGKVARACKVLDELAPMGVVLETA 563
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ I+ D TY+ I+ C RVE+ + + E G+ +A+ Y +I G +
Sbjct: 381 DGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDE 440
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDD---ITFTTLMH 150
A + EM +KG PD++ Y++LI LC R+ +A L + M + TFT L+
Sbjct: 441 AEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILIS 500
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+A M MI KG+ P+ + A+ GLC G+V A +L
Sbjct: 501 ELFRVHRNEEAVKMWDLMIDKGITPNVA--------CFRALSIGLCLSGKVARACKVLDE 552
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ MG+ + +Y +I C+ +++A +L
Sbjct: 553 LAPMGVVLE-TAYEDMIGALCKAGRVKEACKL 583
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 25/288 (8%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+ ++ D+ YN I+K C M +++ + I++ M + ++ +I GF +
Sbjct: 542 DGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETRR 601
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMH 150
A E M + G +P TY++LI L K ++ +A + EM P++ T+TTLM
Sbjct: 602 ALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQ 661
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
G+ KAF + + G+ D ++TY A++ C GR++ AL + +
Sbjct: 662 GYASLGDTEKAFQYFTILKNDGLEID--------VYTYEALLKACCKSGRMQSALAVTKE 713
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M + + Y I+I G+ + ++ +A +L +M ++ V D
Sbjct: 714 MSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGV--------------QPDIH 759
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
TY S INA C G++ + EM +G P+ + LI+G + A
Sbjct: 760 TYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHGWARAA 807
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 171/420 (40%), Gaps = 51/420 (12%)
Query: 18 MVRNGVVCRFTAARNSE-SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDAL 76
M+ N C R E + +Y +I + + +V K + I R M G+ +
Sbjct: 455 MIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNMK 514
Query: 77 SYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM 136
+Y + GF + A+ ++ + G+ PD Y+++++A C + A + ++M
Sbjct: 515 TYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQM 574
Query: 137 LSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
TF ++H GE +A + M G + P + TYNA+I
Sbjct: 575 QRERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSGCI--------PTVHTYNALIL 626
Query: 194 GLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG 253
GL ++E+AL IL M G+SP+ +Y ++ G+ + KA++ + G
Sbjct: 627 GLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKND---G 683
Query: 254 LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
L+ Y TY +L+ A C G + L + EMS K ++ + ++LI+G
Sbjct: 684 LEIDVY-----------TYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDG 732
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN-NEFKSVVGLVKSFSMRG- 371
AR D L+ P+ Y + I C + ++ ++K RG
Sbjct: 733 W---ARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARGI 789
Query: 372 ---------LVNEAARA----------HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
L++ ARA D + G KPD AVY+ L+ R + ++Y
Sbjct: 790 KPNLKTYTTLIHGWARAAFPEKALKCFEDLKVAG-LKPDRAVYHCLMTSLLSRATIAQSY 848
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 156/401 (38%), Gaps = 56/401 (13%)
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
M +G+ P + Y +I + R +A +M +GI TYS ++
Sbjct: 326 FESMRARGIEPSSHVYSSLIHAYAVGRDMEEALNCVRKMKDEGIEMSIVTYSIIVGGFAK 385
Query: 123 KRRLSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
A + F+E L + + + ++++A C + +A + +M +G+
Sbjct: 386 LGNADAADNWFKEAKESLPSLNAVIYGSIIYAHCQACKMGRAEALVREMEEQGI------ 439
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
+ Y+ ++ G +G E+ L + + E G SP VSY +I+ + + ++ KA
Sbjct: 440 --DAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYTKIGKVSKA 497
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQG---LSD--------EDT-----------YASLIN 277
E+ M + V + TY+ L G L D ED Y +++
Sbjct: 498 LEISRVM-KTVGIKHNMKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVK 556
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT 337
A+C G + + + + +M + + +I+G + T+ L I D M
Sbjct: 557 AFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETRRA-----LEIFDTMRR 611
Query: 338 S--MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVY 395
S +P Y+ LI +GLV+ M +A + D M P+ Y
Sbjct: 612 SGCIPTVHTYNALI-----------LGLVEKCQME----KALQILDEMNLAGVSPNEHTY 656
Query: 396 NLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
L+ + + KA+ + + G +++ ALL A
Sbjct: 657 TTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKA 697
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 172/435 (39%), Gaps = 44/435 (10%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
+++A + F + R+ R +Q Y ++ + + +VE+ + ++ M
Sbjct: 233 TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ P +Y +I G + AY M + G PD ++LI L RL
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRL 352
Query: 127 SEAYHLFQEML---SPPDDITFTTLMHACCLE-GEFSKAFHMHHQMIHKGVLPDFVTGFS 182
EA LF+EM P+ +T+ T++ + + S+A +M GV+
Sbjct: 353 KEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVV-------- 404
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P+ FTY+ +I G C RVE+AL +L M E G P +Y +I+ + + A EL
Sbjct: 405 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANEL 464
Query: 243 KVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
E+ G S YA +I + G + + L +EM G +P
Sbjct: 465 FQELKENC--------------GSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIP 510
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D + LI G ++ AD M + + ++ T+ EN N + S
Sbjct: 511 DVYAYNALITG---------------MVRADMMDEA---FSLFRTMEENGCNPDINSHNI 552
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
++ + G A M KPD YN ++ R +A + EM G
Sbjct: 553 ILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612
Query: 423 FVSHMFSVLALLTAL 437
F + + ++L A+
Sbjct: 613 FEYDLITYSSILEAV 627
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 162/404 (40%), Gaps = 53/404 (13%)
Query: 74 DALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
D+ +Y +I NR G+ + +M + S +++ L + +++A +F
Sbjct: 124 DSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIF 183
Query: 134 QEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG-VLPDFVTGFSPALFTYN 189
++ P T+ +++ EG K ++++M +G PD VT Y+
Sbjct: 184 YQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVT--------YS 235
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD-R 248
A+I L R + A+ + M E GL P A Y ++ + + ++ +A L EM R
Sbjct: 236 ALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMR 295
Query: 249 KVVWGLDEVTYAYLMQGLSD----EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
+ V + TY L++GL ED Y N M G PD
Sbjct: 296 RCVPTV--YTYTELIRGLGKSGRVEDAYGVYKN-----------------MLKDGCKPDV 336
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLV 364
V+ + LIN L + R K+ + L + PN + Y+T+I++
Sbjct: 337 VLMNNLINILGRSDRLKEA---VELFEEMRLLNCTPNVVTYNTIIKSL------------ 381
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
F + +EA+ + M + P Y++LI C+ V KA + EM GF
Sbjct: 382 --FEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFP 439
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
+ +L+ +L Y + + Q +C + ++ V+
Sbjct: 440 PCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVM 483
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
+Y +I C + + +LR + K + + + Y +I G C ++ AYE E
Sbjct: 151 VSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYELYSE 210
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
M K I P T +SLI C + EA+ L +EM+ PD TF L+ A C EG+
Sbjct: 211 MITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 270
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A M+ +GV+PD VT Y++++ G C + V +A +L + M ++
Sbjct: 271 IKEAKSGIAVMMKEGVMPDVVT--------YSSLMDGYCLVNEVNKAKHVLSIISRMRVA 322
Query: 218 PDAVSYIIVISGF 230
P+A SY IVI+GF
Sbjct: 323 PNARSYSIVINGF 335
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 27/283 (9%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I+ ++ + + +I +C + ++ I + + G P+ ++ ++ GFC N +A
Sbjct: 76 IKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEAL 135
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G + +Y +LI LC A + +++ L + + ++T++
Sbjct: 136 HFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGL 195
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C + + A+ ++ +MI K + SP + T N++I+G C +G+ +EA G+LR M
Sbjct: 196 CKDKLVNDAYELYSEMITKRI--------SPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 247
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYE-LKVEMDRKVVWGLDEVTYAYLMQGLSDEDT 271
++PD ++ I++ C+ ++++A + V M V + D T
Sbjct: 248 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGV---------------MPDVVT 292
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
Y+SL++ YC E+ K + +S P++ S++ING
Sbjct: 293 YSSLMDGYCLVNEVNKAKHVLSIISRMRVAPNARSYSIVINGF 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 121/304 (39%), Gaps = 54/304 (17%)
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L ++H + P I F ++ + + + +Q+ G+ P+ V+
Sbjct: 29 LVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVS------ 82
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+ +I+ C LG++ A I + +MG P+ ++ ++ GFC N ++++A
Sbjct: 83 --LSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFH-- 138
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D + G ++ +Y +LIN C GE L + ++ K + V
Sbjct: 139 -DHVLALGFH-----------FNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVV 186
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYDTLIEN-CSNNEFK 358
+ S +I+GL K D A +Y+ M P + ++LI C +FK
Sbjct: 187 MYSTIIDGLCKDKLVND---------AYELYSEMITKRISPTVVTLNSLIYGYCIVGQFK 237
Query: 359 SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
GL++ ++ N PD +N+L+ C+ + +A + M
Sbjct: 238 EAFGLLREMVLK----------------NINPDVYTFNILVDALCKEGKIKEAKSGIAVM 281
Query: 419 VRYG 422
++ G
Sbjct: 282 MKEG 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ I + T N +I +C++ + ++ G+LR M K ++PD ++ ++ C
Sbjct: 213 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 272
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+A M ++G++PD TYSSL+ C +++A H+
Sbjct: 273 EAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVLS 314
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 188/440 (42%), Gaps = 44/440 (10%)
Query: 15 FRHMVRNG---VVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGL 71
F+ ++R G + R A E I+ TYN ++ L +++ V M +G+
Sbjct: 211 FKVILRRGRYMMAKRVYNAMLREGIEPTRHTYNILLWGMFLSLKLDTAVRFYDDMKSRGI 270
Query: 72 SPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
PD ++Y +I GF + +A +EM K ++P+ +Y+++++ ++ A+
Sbjct: 271 EPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTMLKGFVDVGKVDRAFE 330
Query: 132 LFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTY 188
+F+EM P+ +TFTTL+ C + +A ++ +M+ + + P + F
Sbjct: 331 VFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGEMVERYIAPKDNSVFM------ 384
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
++ C G ++ A+ +L M + + +A Y ++I FC+ +A +L ++
Sbjct: 385 -KLMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLIENFCKANVYDRAEKLLDKLIE 443
Query: 249 KVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDS 308
K + E +Y + Y +I C G+ K EM + + V+D
Sbjct: 444 KDIVLRPETSYEM------EASAYNRMIGYLCDNGKTAKA-----EMFFRQLMKKGVLDP 492
Query: 309 LLINGL---DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
+ N L K D+ + I++ ++E+ S L++
Sbjct: 493 VAFNNLMCGHSKEGNPDSAFEIATIMSR----------------RKVHSDEY-SYRLLIE 535
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
S+ +G +A A D MLEG ++P+ ++Y ++ V A + MV G +
Sbjct: 536 SYLRKGEPADAKTALDHMLEGGHEPNSSLYRSVMESLFEDGRVQTASRVMKNMVEKGVKN 595
Query: 426 HMFSVLALLTALRDHGMYNE 445
+M V +L AL G E
Sbjct: 596 NMDLVSKILEALFIRGHVEE 615
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 164/415 (39%), Gaps = 72/415 (17%)
Query: 23 VVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI 82
RF S I+ D+ TYN +I ++V++ + M K L P+ +SY ++
Sbjct: 257 TAVRFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTML 316
Query: 83 TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM----LS 138
GF + +A+E EM GI P+A T+++L+ LC ++ EA ++ EM ++
Sbjct: 317 KGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGEMVERYIA 376
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMI---------HKGVLPDFVTGFSPALFTYN 189
P D+ F LM C G A + + MI H GVL + F A N
Sbjct: 377 PKDNSVFMKLMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVL---IENFCKA----N 429
Query: 190 AIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
L ++ E +LR PE +A +Y +I C N + KA ++ +K
Sbjct: 430 VYDRAEKLLDKLIEKDIVLR--PETSYEMEASAYNRMIGYLCDNGKTAKAEMFFRQLMKK 487
Query: 250 VVWGLDEVTYAYLMQG----------------------LSDEDTYASLINAYCAQGELFK 287
V LD V + LM G SDE +Y LI +Y +GE
Sbjct: 488 GV--LDPVAFNNLMCGHSKEGNPDSAFEIATIMSRRKVHSDEYSYRLLIESYLRKGEPAD 545
Query: 288 VLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDT 347
T D M G P+S + ++ L + R + +
Sbjct: 546 AKTALDHMLEGGHEPNSSLYRSVMESLFEDGRVQTASR------------------VMKN 587
Query: 348 LIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
++E N V ++++ +RG V EA D ++ +PD FDH
Sbjct: 588 MVEKGVKNNMDLVSKILEALFIRGHVEEALGRIDLLMNSGCEPD--------FDH 634
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGIL-RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
D+ T+ +I ++V++ + + R M E GL P ++Y +I + P A+E
Sbjct: 430 DVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEV 489
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCL 154
M GI PD+ TY+ +++ LC ++ EA +Q ++ P D+ + ++ C
Sbjct: 490 FNNMAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCS 549
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G+F++A H ++++ G+ SP +++YN +I+ C LG E I+R M +
Sbjct: 550 SGKFNEACHFLYELVDSGI--------SPNIYSYNILINCACNLGLKREVYQIVREMNKN 601
Query: 215 GLSPDAVSYIIV 226
G++PD V++ I+
Sbjct: 602 GVAPDCVTWRIL 613
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMA-EKGLSPDALSYRYVITGFCNNRCPGKAY 95
Q D+ T N +I C M R ++ + +L M K +PD +++ +I+G + +A
Sbjct: 392 QTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEAL 451
Query: 96 E-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHA 151
+ F M + G+ P TY+ LI+ L +R ++A+ +F M PD T+T ++
Sbjct: 452 DLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEG 511
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
C + +A +I + D F Y AI+ GLC G+ EA L +
Sbjct: 512 LCECDQIEEAKSFWQSVIWPSGIHDN--------FVYAAILKGLCSSGKFNEACHFLYEL 563
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+ G+SP+ SY I+I+ C R+ Y++ EM++ V D VT+ L
Sbjct: 564 VDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGV-APDCVTWRIL 613
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 175/463 (37%), Gaps = 74/463 (15%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
L YN+++ C + R + M +G P+ +SY +I G+C+ A +
Sbjct: 110 LVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFD 169
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDDIT-----FTTLMHA 151
EM + G+ P++ TYS LI+ R L E + D+++ F L+ +
Sbjct: 170 EMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFANLIDS 229
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPA 184
C EG F++ F + M LP+ V F P+
Sbjct: 230 LCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPS 289
Query: 185 LFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL-- 242
+YN IIHGL G +L E G S +Y +++ C+ ++ KA E+
Sbjct: 290 DVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAREVLK 349
Query: 243 ----KVEMDRKVVWG---------------LDEVTYAYLMQGLSDEDTYASLINAYCAQG 283
K +D+ ++ L+ + + +D T ++IN +C G
Sbjct: 350 LMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMG 409
Query: 284 ELFKVL-TLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNY 342
+ L L+D + K PD V + LI+GL + + ++ + P
Sbjct: 410 RFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLK--PGV 467
Query: 343 IIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDH 402
+ Y+ LI + + L + N+A + M PD Y +++
Sbjct: 468 VTYNVLI--------RCLYKLKRP-------NDAFEVFNNMAGDGITPDSTTYTVIVEGL 512
Query: 403 CRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
C + +A + + ++ + F A+L L G +NE
Sbjct: 513 CECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNE 555
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 45/312 (14%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TY +++ C + V+K +L+ M K Y + C+ P + + M
Sbjct: 327 TYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFM 386
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML----SPPDDITFTTLMHACCLEGE 157
+ D T +++I C R EA + +ML PD +TFTTL+ +
Sbjct: 387 LESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEK 446
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + ++ V+P+ G P + TYN +I L L R +A + M G++
Sbjct: 447 VDEALDLFNR-----VMPE--NGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGIT 499
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW--GL-DEVTYAYLMQGLSDED---- 270
PD+ +Y +++ G C+ ++ +A + V+W G+ D YA +++GL
Sbjct: 500 PDSTTYTVIVEGLCECDQIEEAKSFW----QSVIWPSGIHDNFVYAAILKGLCSSGKFNE 555
Query: 271 ------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
+Y LIN C G +V + EM+ G PD V +L
Sbjct: 556 ACHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRIL-- 613
Query: 313 GLDKKARTKDTK 324
K ++K TK
Sbjct: 614 ---HKLQSKVTK 622
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 46/351 (13%)
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTT 147
P K F L+ P T S+++ LC+ R EA+ F LS PD T
Sbjct: 19 PHKPRPFILQFSSLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNL 78
Query: 148 LMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGI 207
L+ + + + +I GF P+L YN ++ CF+ R +A +
Sbjct: 79 LLAKLLRSKTPFQTWSLVKSLIQ------IKAGFVPSLVNYNRLMDHFCFIHRPFDAHRL 132
Query: 208 LRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD--EVTYAYLMQG 265
M G P+ VSY +I+G+C +R A ++ EM GL+ +TY+ L++G
Sbjct: 133 FFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLES---GLEPNSMTYSVLIRG 189
Query: 266 LSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKA 325
+ S C +L++ + ++DE+S + ++IDSL G +
Sbjct: 190 FLRGRDFESGRELMC---KLWERMKMEDELSVNVAAFANLIDSLCKEGFFNE-------- 238
Query: 326 HLLLIIADYMY--TSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTM 383
+ IA+ M +S+P ++Y +I+ SF G + AAR M
Sbjct: 239 --VFEIAELMPCGSSLPEQVVYGQMID---------------SFCKVGRYHGAARIVYLM 281
Query: 384 LEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF--VSHMFSVLA 432
+ + P YN +I + + + Y + E +GF H + VL
Sbjct: 282 RKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLV 332
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F ++ + TYN +I+ ++R + MA G++PD+ +Y ++ G C
Sbjct: 454 FNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLC 513
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
+A F + + D F Y+++++ LCS + +EA H E++ P+
Sbjct: 514 ECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIY 573
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT 179
++ L++ C G + + + +M GV PD VT
Sbjct: 574 SYNILINCACNLGLKREVYQIVREMNKNGVAPDCVT 609
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 25/204 (12%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKA 161
GI P+ TY++LI C +L EA LF++M+S P+ TF L+ A C EG+ +A
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
++ + M+ K + D V Y+++++G C + V +A I + M E LS D
Sbjct: 86 KNVLNTMMEKDLKSDVV--------AYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVR 137
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCA 281
SY I+I+ FC+ + + +A +L EM K ++ D TY +LI+ C
Sbjct: 138 SYNIMINEFCKMKMVDEAIKLFEEMPLKQIF--------------PDVVTYHTLIDGLCK 183
Query: 282 QGELFKVLTLDDEMSHKGSLPDSV 305
G L + L DEM +G P+ +
Sbjct: 184 SGRLSYAMELVDEMDDRGEPPNII 207
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYE----FKLEMDQKGILPDAFTYSSLIQALCSKRR 125
G+SP+ ++Y +I GFC GK E FK +M + I P+ +T++ L+ A C + +
Sbjct: 26 GISPNVVTYTALIDGFC---VVGKLEEALGLFK-KMISENINPNVYTFNGLVDAFCKEGK 81
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ EA ++ M+ D + +++LM+ CL E KA + M + + D
Sbjct: 82 IEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYD------ 135
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
+ +YN +I+ C + V+EA+ + MP + PD V+Y +I G C++ L A EL
Sbjct: 136 --VRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMEL 193
Query: 243 KVEMDRK 249
EMD +
Sbjct: 194 VDEMDDR 200
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I ++ TY +I C++ ++E+ +G+ + M + ++P+ ++ ++ FC +A
Sbjct: 27 ISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAK 86
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHAC 152
M +K + D YSSL+ C + +A +F+ M D ++ +++
Sbjct: 87 NVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEF 146
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C +A + +M K + PD V TY+ +I GLC GR+ A+ ++ M
Sbjct: 147 CKMKMVDEAIKLFEEMPLKQIFPDVV--------TYHTLIDGLCKSGRLSYAMELVDEMD 198
Query: 213 EMGLSPDAVSYIIVISGFCQNRE 235
+ G P+ ++Y ++ C+N +
Sbjct: 199 DRGEPPNIITYCPIVDVLCKNHD 221
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 2 KLLRDSFTATLKTFRHMV----RNGVVCRFTAARN------SESIQQDLATYNKIIKQHC 51
K++ ++ + TF +V + G + A+N + ++ D+ Y+ ++ +C
Sbjct: 56 KMISENINPNVYTFNGLVDAFCKEG---KIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYC 112
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
L+ V K I + MAE+ LS D SY +I FC + +A + EM K I PD
Sbjct: 113 LVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVV 172
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHACC 153
TY +LI LC RLS A L EM PP+ IT+ ++ C
Sbjct: 173 TYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLC 217
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
L + + G SP + TY A+I G C +G++EEALG+ + M ++P+ ++ ++ FC+
Sbjct: 20 LLNLMCGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKE 79
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----------------------DEDT 271
++ +A + M K + D V Y+ LM G D +
Sbjct: 80 GKIEEAKNVLNTMMEKDLKS-DVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRS 138
Query: 272 YASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
Y +IN +C + + + L +EM K PD V LI+GL K R
Sbjct: 139 YNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGR 186
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 27/273 (9%)
Query: 54 QRVEKGVGILRGMAEKGLSPDALSYRYVITGFC--NNRCPGKAYEFKLEMDQKGILPDAF 111
V V M +P + + ++ NN A +++ GI+PD
Sbjct: 109 NHVHDAVSSFHHMIRMNPTPSIIEFNKILGSLVKSNNNHYTTAISLFHQLEFNGIIPDIV 168
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
T S LI C +++ A+ +F +L P+ +T TL+ CL G+ +A H H +
Sbjct: 169 TLSILINCYCHLGQMNFAFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHV 228
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
I GF TY +I+GLC +G+ EAL +LR + ++ D V Y +I
Sbjct: 229 I--------ALGFPLNQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIID 280
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
C+ + +AYEL +M K Y++ T +SLI +C G+L K
Sbjct: 281 SLCKEIFVTEAYELYSQMIVKKFS-------PYVV-------TLSSLIYGFCIVGQLKKA 326
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
L EM P+ ++L++ L K+ K
Sbjct: 327 FCLFHEMLLTNIHPNVYTFNILVDALCKEGNVK 359
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 114/247 (46%), Gaps = 24/247 (9%)
Query: 6 DSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRG 65
+ +T + F + NG++ D+ T + +I +C + ++ I
Sbjct: 146 NHYTTAISLFHQLEFNGII-------------PDIVTLSILINCYCHLGQMNFAFSIFGN 192
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ + G P+ ++ ++ G C N +A F + G + TY +LI LC +
Sbjct: 193 ILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLINGLCKMGK 252
Query: 126 LSEAYHLFQEM---LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+EA + +++ L D + ++T++ + C E ++A+ ++ QMI V FS
Sbjct: 253 TTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTEAYELYSQMI--------VKKFS 304
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + T +++I+G C +G++++A + M + P+ ++ I++ C+ ++ A L
Sbjct: 305 PYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVDALCKEGNVKGAMNL 364
Query: 243 KVEMDRK 249
M ++
Sbjct: 365 LAVMMKE 371
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 42/302 (13%)
Query: 128 EAYHLFQEMLSPPDDITFTTLMHACCLEG--EFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
++H M P I F ++ + ++ A + HQ+ G++PD VT
Sbjct: 116 SSFHHMIRMNPTPSIIEFNKILGSLVKSNNNHYTTAISLFHQLEFNGIIPDIVT------ 169
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+ +I+ C LG++ A I + +MG P+ V+ ++ G C N ++++A
Sbjct: 170 --LSILINCYCHLGQMNFAFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFH-- 225
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
D + G ++ TY +LIN C G+ + L + ++ K D V
Sbjct: 226 -DHVIALGFPL-----------NQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVV 273
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
+ S +I+ L K+ + Y +Y +I + ++ L+
Sbjct: 274 MYSTIIDSLCKEIFVTEA------------------YELYSQMIVKKFSPYVVTLSSLIY 315
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
F + G + +A ML N P+ +N+L+ C+ NV A N+ M++ F
Sbjct: 316 GFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVDALCKEGNVKGAMNLLAVMMKEAFRL 375
Query: 426 HM 427
H+
Sbjct: 376 HV 377
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M GL P+ +Y ++ G+C + +A E M +LPD +TY+++++ LC + +
Sbjct: 1 MKNNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGK 60
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+ EA L EM S PD +T+ TL+ C + AF + +M +GV + V
Sbjct: 61 IDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAV---- 116
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMG--LSPDAVSYIIVISGFCQNRELRKAY 240
T+N ++ C G V+EA + M E G L +SY ++I+G+C+ ++ KA+
Sbjct: 117 ----THNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAF 172
Query: 241 ELKVEMDRK 249
++ EM RK
Sbjct: 173 KMMDEMGRK 181
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
TYN ++ +C ++ +++ V + M + PD +Y ++ G C+ +A + EM
Sbjct: 12 TYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRLRDEM 71
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ ++PD TY++LI + + A+ L +EM S + +T ++ C EG
Sbjct: 72 ESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIMVKWFCKEGNV 131
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
+A + +M G L L +YN +I+G C G++ +A ++ M GL
Sbjct: 132 DEASNAMAKMSESGFL------LIVLLISYNMMINGYCKAGKMAKAFKMMDEMGRKGLKT 185
Query: 219 DAVSYIIVISGFCQNRELRKAY 240
D + ++ C ++L AY
Sbjct: 186 DTFTLNTILYTLCLEKKLDDAY 207
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ TYN +++ C ++++ V + M L PD ++Y +I G ++ A++
Sbjct: 44 DVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLV 103
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM-----LSPPDDITFTTLMHACC 153
EM +G+ +A T++ +++ C + + EA + +M L I++ +++ C
Sbjct: 104 EEMKSRGVKENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYC 163
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
G+ +KAF M +M KG+ D FT N I++ LC ++++A
Sbjct: 164 KAGKMAKAFKMMDEMGRKGLKTD--------TFTLNTILYTLCLEKKLDDA 206
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 35/190 (18%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P+ T+ L+H C +A + M +LPD ++TYN ++ GLC G
Sbjct: 8 PNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPD--------VWTYNTMVRGLCDEG 59
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK---------- 249
+++EA+ + M + L PD V+Y +I G +++ A++L EM +
Sbjct: 60 KIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHN 119
Query: 250 --VVW-----GLDEVTYAYLMQGLSDED--------TYASLINAYCAQGELFKVLTLDDE 294
V W +DE + A M +S+ +Y +IN YC G++ K + DE
Sbjct: 120 IMVKWFCKEGNVDEASNA--MAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMDE 177
Query: 295 MSHKGSLPDS 304
M KG D+
Sbjct: 178 MGRKGLKTDT 187
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 40/232 (17%)
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG---LS 267
M GL P+ +Y I++ G+C+ + L++A E+ LM G L
Sbjct: 1 MKNNGLVPNRNTYNILVHGYCKLKWLKEAVEV-----------------TELMTGNDMLP 43
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
D TY +++ C +G++ + + L DEM +PD V + LI+G + + A
Sbjct: 44 DVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGC---FEHQGSAAAF 100
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
L+ N + ++ + VK F G V+EA+ A M E
Sbjct: 101 KLVEEMKSRGVKENAVTHNIM---------------VKWFCKEGNVDEASNAMAKMSESG 145
Query: 388 YKPDGAV--YNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTAL 437
+ + YN++I +C+ + KA+ M EM R G + F++ +L L
Sbjct: 146 FLLIVLLISYNMMINGYCKAGKMAKAFKMMDEMGRKGLKTDTFTLNTILYTL 197
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKG--LSPDALSYRYVITGFCNNRC 90
S ++++ T+N ++K C V++ + M+E G L +SY +I G+C
Sbjct: 108 SRGVKENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGK 167
Query: 91 PGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYH 131
KA++ EM +KG+ D FT ++++ LC +++L +AY+
Sbjct: 168 MAKAFKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDDAYN 208
>Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:37765859-37769483 | 20130731
Length = 724
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 172/440 (39%), Gaps = 91/440 (20%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q DL+ Y I C +VE+GV + R M + L P+AL Y +I C N A
Sbjct: 268 QPDLSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVPEALIYEALIQCLCKNLKLDSAVN 327
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEG 156
EM + GILP+ + +I C ++ EA +F E + F L+ CC G
Sbjct: 328 LINEMIESGILPNENVFVHMINCYCELGKIDEAI-MFLEDKQVSETAPFNVLLEGCCNAG 386
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ A + M + + ++N +I LC E+A +L M + +
Sbjct: 387 KILVANVLLETMTDRNI---------ADCQSWNIVIRRLCENEETEKAYTLLGRMIKFSV 437
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKV---VWGLDEVTYAYLMQGLSDED--- 270
D +Y ++ G C+ RE Y+ +E+ R++ W LD +Y L+ GL D+
Sbjct: 438 VLDGSTYSALVLGNCRVRE----YDEAMELFRRICARCWSLDITSYTELVDGLCDDINRC 493
Query: 271 --------------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
++ LI C G+ K + L + G +V + +
Sbjct: 494 QHAIEVFYYMSKKQFSLHSFSFYKLIKCVCDSGQANKAINLWQLAYYCGISCCNVTQTTI 553
Query: 311 INGLDKKARTKDTKAHL--LLIIADYM----YTSMPNYIIYDTLIENC------------ 352
++ L K + ++ A L +LI+ + Y + N +I +L++ C
Sbjct: 554 MHELSKSDKAENLLAFLSQILIVGGSLDTEAYCILINGMIKQSLVKECVLFFNMMVNEGL 613
Query: 353 --------------SNNEFKSVVGLV------------KSFSM-------RGLVNEAARA 379
+NN S++ KS+S+ G +EA R
Sbjct: 614 IPDPDKLFDQLSFIANNSLLSMISSAIETISDSEKLSSKSYSLLIAGLWKEGKEHEARRL 673
Query: 380 HDTMLEGNYKPDGAVYNLLI 399
D ML+ + PD A + LLI
Sbjct: 674 LDVMLKKGWLPDTATHKLLI 693
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 170/429 (39%), Gaps = 75/429 (17%)
Query: 3 LLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
+L+ + + V N V RF + +++ L + +HC R+++G+ +
Sbjct: 101 ILKLGLAGNVLEMENFVHNMVKNRF------QGVEKALVSLIHTFVEHC---RIKEGLVV 151
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPG--KAYEFKLEMDQKGILPDAFTYSSLIQAL 120
L M G P + ++ A EM + G+LP T + L++ L
Sbjct: 152 LVNMNSGGYKPPIQVFNALLGAIVKEESGDFQNALLVYKEMVKAGVLPTVDTLNCLLEIL 211
Query: 121 CSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
+ R+ A F+ M + P+ TF L+ G+ +A + +M+ PD
Sbjct: 212 FTIDRVDLALDQFRRMNNKGCSPNSKTFEILVKGLIENGQVDEAVAVLEEMLKLECQPD- 270
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
L Y I C +VEE + + R M + L P+A+ Y +I C+N +L
Sbjct: 271 -------LSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVPEALIYEALIQCLCKNLKLD 323
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
A L EM + L +E+ + +IN YC G++ + + ++
Sbjct: 324 SAVNLINEMIESGI--------------LPNENVFVHMINCYCELGKIDEAIMFLEDKQV 369
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN------ 351
+ P +V L+ G + +++A+ + +M + I D N
Sbjct: 370 SETAPFNV----LLEGCCNAGK---------ILVANVLLETMTDRNIADCQSWNIVIRRL 416
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
C N E + K++++ G M++ + DG+ Y+ L+ +CR +
Sbjct: 417 CENEETE------KAYTLLG----------RMIKFSVVLDGSTYSALVLGNCRV----RE 456
Query: 412 YNMYMEMVR 420
Y+ ME+ R
Sbjct: 457 YDEAMELFR 465
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 33/294 (11%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN--NRCPG 92
S+ D +TY+ ++ +C ++ ++ + + R + + S D SY ++ G C+ NRC
Sbjct: 436 SVVLDGSTYSALVLGNCRVREYDEAMELFRRICARCWSLDITSYTELVDGLCDDINRCQ- 494
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
A E M +K +F++ LI+ +C + ++A +L+Q ++T TT+M
Sbjct: 495 HAIEVFYYMSKKQFSLHSFSFYKLIKCVCDSGQANKAINLWQLAYYCGISCCNVTQTTIM 554
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
H E SK+ + + + + G S Y +I+G+ V+E +
Sbjct: 555 H------ELSKSDKAENLLAFLSQI--LIVGGSLDTEAYCILINGMIKQSLVKECVLFFN 606
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM--DRKVVWGLDEVTYAYLMQGLS 267
M GL PD +S F N L +E D + L +Y+ L+ GL
Sbjct: 607 MMVNEGLIPDPDKLFDQLS-FIANNSLLSMISSAIETISDSE---KLSSKSYSLLIAGLW 662
Query: 268 DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
E G+ + L D M KG LPD+ LLI D++ R++
Sbjct: 663 KE-------------GKEHEARRLLDVMLKKGWLPDTATHKLLIGSDDREGRSQ 703
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 128/343 (37%), Gaps = 71/343 (20%)
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS----PPDDITFTTLMHACCLE--GEFSKAFHMHHQM 168
SLI R+ E + M S PP + F L+ A E G+F A ++ +M
Sbjct: 134 SLIHTFVEHCRIKEGLVVLVNMNSGGYKPPIQV-FNALLGAIVKEESGDFQNALLVYKEM 192
Query: 169 IHKGVLPDFVT---------------------------GFSPALFTYNAIIHGLCFLGRV 201
+ GVLP T G SP T+ ++ GL G+V
Sbjct: 193 VKAGVLPTVDTLNCLLEILFTIDRVDLALDQFRRMNNKGCSPNSKTFEILVKGLIENGQV 252
Query: 202 EEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY 261
+EA+ +L M ++ PD Y I FC+ ++ + L M D V A
Sbjct: 253 DEAVAVLEEMLKLECQPDLSFYTCTIPLFCRENKVEEGVRLFRMMKDS-----DLVPEAL 307
Query: 262 LMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTK 321
+ Y +LI C +L + L +EM G LP+ + +IN + +
Sbjct: 308 I---------YEALIQCLCKNLKLDSAVNLINEMIESGILPNENVFVHMINCYCELGKID 358
Query: 322 DTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
+ ++ + + + P ++ L+E C N G + A +
Sbjct: 359 EA---IMFLEDKQVSETAP----FNVLLEGCCN---------------AGKILVANVLLE 396
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
TM + N D +N++I C KAY + M+++ V
Sbjct: 397 TMTDRNI-ADCQSWNIVIRRLCENEETEKAYTLLGRMIKFSVV 438
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 129/285 (45%), Gaps = 30/285 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S ++ TY+ +I C++ ++ + M + ++P+ ++ ++ GFC
Sbjct: 3 SRRTSPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVK 62
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHAC 152
+A M ++GI PD TY+SL+ C + +++A + + +TL+
Sbjct: 63 EAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKA-----KKKCIANKFFRSTLIDVL 117
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
C S A + +M +G PD + TYN+I+ LC +A+ +L +
Sbjct: 118 CKSRRVSYALELVDEMHDRGQQPDII--------TYNSILDALCKKHHAGKAIALLTKLK 169
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ G+ P+ +Y I++ G C++ +L A ++ ++ + LD Y ++QG
Sbjct: 170 DQGIRPNMNTYTILVKGLCRSGKLEDARKVFEDLG----YNLDVYAYTVMIQG------- 218
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKK 317
+C +G +VL L +M G +PD+ ++I L +K
Sbjct: 219 ------FCDKGLFDEVLALLSKMEENGCIPDAKTYEIIILSLFEK 257
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 138 SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
+ P+ +T++ L+ C+ G+ A ++MI + + +P ++T+ ++ G C
Sbjct: 6 TSPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENI--------NPNVYTFTILVDGFCK 57
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE------------ 245
GRV+EA +L M + G+ PD V+Y ++ G+C +E+ KA + +
Sbjct: 58 EGRVKEAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVL 117
Query: 246 -MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
R+V + L+ V + D TY S+++A C + K + L ++ +G P+
Sbjct: 118 CKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNM 177
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLV 364
++L+ GL + + +D + + D Y N +Y + ++
Sbjct: 178 NTYTILVKGLCRSGKLEDARK----VFEDLGY----NLDVYAYTV-------------MI 216
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ F +GL +E M E PD Y ++I + A + EM+ G +
Sbjct: 217 QGFCDKGLFDEVLALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKG---------------------------VGILRG 65
+ I+ D+ TYN ++ +C+++ V K + ++
Sbjct: 73 KQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKSRRVSYALELVDE 132
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M ++G PD ++Y ++ C GKA ++ +GI P+ TY+ L++ LC +
Sbjct: 133 MHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVKGLCRSGK 192
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L +A +F+++ D +T ++ C +G F + + +M G +PD
Sbjct: 193 LEDARKVFEDLGYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIPDAK------- 245
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
TY II L + A +LR M GL
Sbjct: 246 -TYEIIILSLFEKDENDMAEKLLREMIMRGL 275
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 25/330 (7%)
Query: 23 VVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI 82
++C A + ++ + +++K + V+ G+ +LR M + + PD + Y VI
Sbjct: 88 IICDVIKAYEVDGCVVNVNMFREVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVI 147
Query: 83 TGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---P 139
C + +M GI PD TY ++I+ LCS RL EAY + + M
Sbjct: 148 KLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCS 207
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P+ + + ++ C +A + +M G P + TY ++I C G
Sbjct: 208 PNSVVLSAVLDGLCRLDSMERALELLDEMEKSG-------DCCPNVVTYTSLIQSFCKRG 260
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
EAL IL M G + V+ +I C + +AY++ +D+ VV
Sbjct: 261 EWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGRVDEAYKV---VDKLVV-------- 309
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+S D Y SL+ ++ +L L EM PD++ SLL+ L K R
Sbjct: 310 ---EHCVSRGDCYNSLVISFIRVKKLEGAENLFKEMLAAEIKPDTLASSLLLKELCLKDR 366
Query: 320 TKDTKAHLLLIIADYMYTSMPNYIIYDTLI 349
D +LL I + + S + IY ++
Sbjct: 367 VLDG-FYLLDTIENMGFLSSIDSDIYSIML 395
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 115/290 (39%), Gaps = 39/290 (13%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
PD + + ++ C +G+ + M G+ PD L TY +I GLC G
Sbjct: 138 PDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPD--------LITYMTMIEGLCSAG 189
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
R+EEA +++ M G SP++V V+ G C+ + +A EL EM++ + VTY
Sbjct: 190 RLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNVVTY 249
Query: 260 AYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
SLI ++C +GE + L + D M G + V LI L + R
Sbjct: 250 T-------------SLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGR 296
Query: 320 TKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARA 379
+ Y + D L+ + LV SF + A
Sbjct: 297 VDEA------------------YKVVDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENL 338
Query: 380 HDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFS 429
ML KPD +LL+ + C + V + + + GF+S + S
Sbjct: 339 FKEMLAAEIKPDTLASSLLLKELCLKDRVLDGFYLLDTIENMGFLSSIDS 388
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYA 260
V+ L +LR M + + PD V Y +VI C+ + VEM K++ +
Sbjct: 121 VDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGD--------VEMGEKLMKDMS----- 167
Query: 261 YLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
+ G+ D TY ++I C+ G L + + M G P+SV+ S +++GL R
Sbjct: 168 --LNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGL---CR 222
Query: 320 TKDTKAHLLLIIADYMYTS---MPNYIIYDTLIEN-CSNNEFK----------------- 358
+ L L+ D M S PN + Y +LI++ C E+
Sbjct: 223 LDSMERALELL--DEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFAN 280
Query: 359 --SVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYM 416
+V L++S G V+EA + D ++ + G YN L+ R + A N++
Sbjct: 281 HVTVFTLIESLCTEGRVDEAYKVVDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENLFK 340
Query: 417 EMV 419
EM+
Sbjct: 341 EML 343
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
+I C ++RV + + + M K + PD ++Y +I GFC + A EM +G
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRG 60
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDDITFTTLMHACCLEGEFSKAF 162
PD Y+S++ ALC ++ +A L F+ P T+T L+ C A
Sbjct: 61 QPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDAR 120
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
++ ++ V G++ + TY +IHGLC +G +EAL +L M + P+ V+
Sbjct: 121 NIFKDLL--------VKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVVT 172
Query: 223 YIIVISGFCQNRELRKAYELKVEM 246
Y I+I E KA ++ EM
Sbjct: 173 YEIIIRSLFDKDENDKAEKIIREM 196
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 15 FRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPD 74
F + R G + I D+ TY+ +I C +++ + ++ M ++G PD
Sbjct: 5 FCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRGQPPD 64
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
+ Y ++ C N KA + +GI P +TY+ LI LC RL +A ++F+
Sbjct: 65 IIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDARNIFK 124
Query: 135 EMLSPPDDI---TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
++L +I T+T ++H C G F +A + +M +P+ V TY I
Sbjct: 125 DLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVV--------TYEII 176
Query: 192 IHGLCFLGRVEEALGILRGM 211
I L ++A I+R M
Sbjct: 177 IRSLFDKDENDKAEKIIREM 196
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRK 249
+I+G C + RV EA+ + M + PD V+Y +I GFC++ ++ A L EM DR
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDR- 59
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
D Y S+++A C ++ K + L + ++G P ++
Sbjct: 60 --------------GQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTI 105
Query: 310 LINGLDKKARTKDTK 324
LI+GL K R +D +
Sbjct: 106 LIDGLCKGERLEDAR 120
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ IQ + TY +I C +R+E I + + KG + +Y +I G CN
Sbjct: 93 NQGIQPSVYTYTILIDGLCKGERLEDARNIFKDLLVKGYNITVNTYTDMIHGLCNMGLFD 152
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS 138
+A LEM +P+ TY +I++L K +A + +EM++
Sbjct: 153 EALALLLEMKDNSCIPNVVTYEIIIRSLFDKDENDKAEKIIREMIT 198
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E D+ TYN ++ + ++ + + M GLSPD +Y ++ K
Sbjct: 281 EGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCK 340
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E M ++GI P +++LI L L + H+F EM+ PD + +T ++
Sbjct: 341 AVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMIT 400
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ EF KA M +MI +G +P+ +FTYN++I G C G+ +EA +L+
Sbjct: 401 GYVVALEFEKAQKMFDKMISRGQIPN--------VFTYNSMIRGFCMAGKFDEACSMLKE 452
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
M G SP+ V Y +++ + +L +A ++ +M K
Sbjct: 453 METKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 491
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 149/400 (37%), Gaps = 51/400 (12%)
Query: 66 MAEKGLSPDALSYRYVITGF-----CNNRCP-GK-AYEFKLEMDQK-GILPDAFTYSSLI 117
+ E G+ P + R V+ C N+ G+ AY+F + QK G +Y ++
Sbjct: 130 LDELGIRPTWILVREVLYAVLREVNCGNKATIGRLAYKFFVWCGQKEGYCHTVNSYHLIM 189
Query: 118 QALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
Q + L EM+ +T T C GE A ++ + I
Sbjct: 190 QIFAECEEFKAMWRLVDEMIEKGFPVTARTFNILICTSGEAGFARNLVVKFIKSRSF--- 246
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ P +YNAI+H L L R + + M G D +Y IV+ + +L
Sbjct: 247 --NYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSDVFTYNIVMVAKYRLGKLN 304
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMS 296
+ Y L EM GLS D TY +++ GEL K + L + M
Sbjct: 305 QLYRLFHEMG---------------GNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMR 349
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIENCSN 354
+G P V + LI+GL + D + I D M +P+ + Y +I
Sbjct: 350 ERGIEPTVVHFTTLIDGLSRSGHLDDCEH-----IFDEMVRIGIIPDVVAYTVMI----- 399
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
G V + +A + D M+ P+ YN +I C +A +M
Sbjct: 400 ------TGYVVALEF----EKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSM 449
Query: 415 YMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
EM G + L+T+LR G + V++ +
Sbjct: 450 LKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMM 489
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
I M G+ PD ++Y +ITG+ KA + +M +G +P+ FTY+S+I+ C
Sbjct: 379 IFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFC 438
Query: 122 SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
+ EA + +EM + P+ + ++TL+ + G+ S+A + QM+ KG
Sbjct: 439 MAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEKG 492
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
E D+ TYN ++ + ++ + + M GLSPD +Y ++ K
Sbjct: 305 EGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCK 364
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMH 150
A E M ++GI P +++LI L L + H+F EM+ PD + +T ++
Sbjct: 365 AVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMIT 424
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
+ EF KA M +MI +G +P+ +FTYN++I G C G+ +EA +L+
Sbjct: 425 GYVVALEFEKAQKMFDKMISRGQIPN--------VFTYNSMIRGFCMAGKFDEACSMLKE 476
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
M G SP+ V Y +++ + +L +A ++ +M K
Sbjct: 477 METKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 515
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 149/400 (37%), Gaps = 51/400 (12%)
Query: 66 MAEKGLSPDALSYRYVITGF-----CNNRCP-GK-AYEFKLEMDQK-GILPDAFTYSSLI 117
+ E G+ P + R V+ C N+ G+ AY+F + QK G +Y ++
Sbjct: 154 LDELGIRPTWILVREVLYAVLREVNCGNKATIGRLAYKFFVWCGQKEGYCHTVNSYHLIM 213
Query: 118 QALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDF 177
Q + L EM+ +T T C GE A ++ + I
Sbjct: 214 QIFAECEEFKAMWRLVDEMIEKGFPVTARTFNILICTSGEAGFARNLVVKFIKSRSF--- 270
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
+ P +YNAI+H L L R + + M G D +Y IV+ + +L
Sbjct: 271 --NYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSDVFTYNIVMVAKYRLGKLN 328
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMS 296
+ Y L EM GLS D TY +++ GEL K + L + M
Sbjct: 329 QLYRLFHEMG---------------GNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMR 373
Query: 297 HKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYT--SMPNYIIYDTLIENCSN 354
+G P V + LI+GL + D + I D M +P+ + Y +I
Sbjct: 374 ERGIEPTVVHFTTLIDGLSRSGHLDDCEH-----IFDEMVRIGIIPDVVAYTVMI----- 423
Query: 355 NEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNM 414
G V + +A + D M+ P+ YN +I C +A +M
Sbjct: 424 ------TGYVVALEF----EKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSM 473
Query: 415 YMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQNTL 454
EM G + L+T+LR G + V++ +
Sbjct: 474 LKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMM 513
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 62 ILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALC 121
I M G+ PD ++Y +ITG+ KA + +M +G +P+ FTY+S+I+ C
Sbjct: 403 IFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFC 462
Query: 122 SKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
+ EA + +EM + P+ + ++TL+ + G+ S+A + QM+ KG
Sbjct: 463 MAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEKG 516
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 161/362 (44%), Gaps = 57/362 (15%)
Query: 7 SFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKG------- 59
SF+A + + RNG F+ A + + Y +I + L+ KG
Sbjct: 215 SFSAMISAYG---RNG---HFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVV 268
Query: 60 VGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
V M +G+ PD L+Y +++ + A + EMDQKGI+ DAFTY++ +
Sbjct: 269 VKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDT 328
Query: 120 LCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD 176
LC ++ A + +EM S P +T++T++ C A +++ +M + + D
Sbjct: 329 LCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVD 388
Query: 177 FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ---N 233
V +YN ++ LGR +EA+G + M G+ D V+Y ++SG+ +
Sbjct: 389 RV--------SYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMY 440
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
E+R+ +E EM W + T TY+++I+ Y G + + +
Sbjct: 441 DEVRRLFE---EMK---AWNIYPNTL-----------TYSTMIDVYTKGGMFQEAMDVYK 483
Query: 294 EMSHKGSLPD-----SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTL 348
+ D S+IDSL NGL ++ ++L+IA PN + ++++
Sbjct: 484 DFKKAQLEVDVVFYTSIIDSLCKNGL--------VESSIMLLIAMIEKGIKPNVVTFNSI 535
Query: 349 IE 350
I+
Sbjct: 536 ID 537
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 136/347 (39%), Gaps = 49/347 (14%)
Query: 77 SYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKR-RLSEAYHLFQE 135
S+ +I+ + N A + M G+ P+ +Y+SLI A F E
Sbjct: 215 SFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDE 274
Query: 136 MLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII 192
ML+ PD +T+ +L+ C +G + A + +M KG++ D FTYN +
Sbjct: 275 MLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRD--------AFTYNTYL 326
Query: 193 HGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVW 252
LC G+++ A +L M + P V+Y +I G + L A L EM + +
Sbjct: 327 DTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSI- 385
Query: 253 GLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLIN 312
+D V+Y +++ Y G + + EM G D V + L++
Sbjct: 386 SVDRVSYN-------------TMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLS 432
Query: 313 GLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN-----------EFKSV- 360
G + + + + A +Y PN + Y T+I+ + +FK
Sbjct: 433 GYGRYGMYDEVRRLFEEMKAWNIY---PNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQ 489
Query: 361 --------VGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
++ S GLV + M+E KP+ +N +I
Sbjct: 490 LEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSII 536
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 170/425 (40%), Gaps = 58/425 (13%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
R + + + E GL P +Y ++ G+ A EM++ G+LPD TYS
Sbjct: 296 RTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYS 355
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
L+ A R A + +EM + P+ ++ ++ + +GE+ K+F + +M
Sbjct: 356 LLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMS 415
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV PD YN +I ++ A+ M G+ PD V++ +I C
Sbjct: 416 GVQPD--------RHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHC 467
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
++ +A EL EM + Y+ + TY +IN+ AQ +V L
Sbjct: 468 KSGRHSRAEELFEEMQQS--------GYSPCVM------TYNIMINSMGAQERWERVNDL 513
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
+M +G LP++V + L++ K R D L ++ + P +Y+ LI
Sbjct: 514 LSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDA-IECLEVLKSMGFK--PTSTMYNALINA 570
Query: 352 CSN--------NEFK--SVVGLVKSF-SMRGLVN---------EAARAHDTMLEGNYKPD 391
+ N F+ + GL S ++ L+N EA M E KPD
Sbjct: 571 YAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 630
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
Y L+ R HK +Y EMV G + L +ALR ++
Sbjct: 631 VVTYTTLMKALIRVDKFHKVPAVYEEMVMSGCTPDRKARAMLRSALR----------YVK 680
Query: 452 NTLRS 456
TLRS
Sbjct: 681 QTLRS 685
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 198/497 (39%), Gaps = 62/497 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGV--GILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ Q D Y+ IIK R++ + + + + D +I GF
Sbjct: 203 DGFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDIILGFSKAGDA 262
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A F KG+ P + T +++I AL + R EA LF+E+ P + L
Sbjct: 263 TRAMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNAL 322
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ G A + +M GVLPD TY+ ++ GR E A +L
Sbjct: 323 LKGYVKTGSLKDAEFVVSEMEKSGVLPD--------EHTYSLLVDAYAHAGRWESARIVL 374
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-------DRKV------VWG-- 253
+ M L P++ Y +++ + E +K++++ EM DR +G
Sbjct: 375 KEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKY 434
Query: 254 --LDEVTYAY---LMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
LD + L +G+ D T+ +LI+ +C G + L +EM G P +
Sbjct: 435 NCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTY 494
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
+++IN + + R + L + + + +PN + Y TL++ +
Sbjct: 495 NIMINSMGAQERWERVNDLLSKMQSQGL---LPNAVTYTTLVD---------------IY 536
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
G N+A + + +KP +YN LI + +R +A N + M G +
Sbjct: 537 GKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSL 596
Query: 428 FSVLALLTAL----RDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATL 483
++ +L+ A RD + ++ +N ++ + + L K L +D KF + A
Sbjct: 597 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD--KFHKVPA-- 652
Query: 484 LDVLAEIAMDGLLLDGR 500
V E+ M G D +
Sbjct: 653 --VYEEMVMSGCTPDRK 667
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 50/325 (15%)
Query: 26 RFTAAR------NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R+ +AR + ++Q + Y++I+ + +K +L+ M G+ PD Y
Sbjct: 366 RWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYN 425
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
+I F C A M +GI PD T+++LI C R S A LF+EM
Sbjct: 426 VMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQS 485
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT----------------- 179
P +T+ ++++ + + + + +M +G+LP+ VT
Sbjct: 486 GYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDA 545
Query: 180 ----------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
GF P YNA+I+ G ++A+ R M GL+P ++ +I+
Sbjct: 546 IECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINA 605
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
F ++R +A+ + M V D VTY LM+ L D + KV
Sbjct: 606 FGEDRRDAEAFAVLQYMKENGV-KPDVVTYTTLMKALIRVDKF-------------HKVP 651
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGL 314
+ +EM G PD ++L + L
Sbjct: 652 AVYEEMVMSGCTPDRKARAMLRSAL 676
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 140/358 (39%), Gaps = 47/358 (13%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA- 129
L+P L+Y +I N KA M + G PD YSS+I++L R+
Sbjct: 172 LTP--LTYNALIGACARNGDLEKALNLMSRMRRDGFQPDFINYSSIIKSLTRSNRIDSPI 229
Query: 130 -YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L+ E+ S D ++ G+ ++A MH + +G G SP
Sbjct: 230 LQKLYAEIESDKIEADGHLLNDIILGFSKAGDATRA--MHFLAVAQG------KGLSPKS 281
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
T A+I L GR EA + + E GL P +Y ++ G+ + L+ A + E
Sbjct: 282 GTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSE 341
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
M++ V L DE TY+ L++AY G + EM P+S
Sbjct: 342 MEKSGV--------------LPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSF 387
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
I S ++ K + + ++ M P+ Y+ +I+
Sbjct: 388 IYSRILASYRDKGEWQKS---FQVLKEMKMSGVQPDRHFYNVMID--------------- 429
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+F ++ A + ML +PD +N LI HC+ +A ++ EM + G+
Sbjct: 430 TFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGY 487
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 170/425 (40%), Gaps = 58/425 (13%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
R + + + E GL P +Y ++ G+ A EM++ G+LPD TYS
Sbjct: 296 RTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYS 355
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
L+ A R A + +EM + P+ ++ ++ + +GE+ K+F + +M
Sbjct: 356 LLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMS 415
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GV PD YN +I ++ A+ M G+ PD V++ +I C
Sbjct: 416 GVQPD--------RHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHC 467
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTL 291
++ +A EL EM + Y+ + TY +IN+ AQ +V L
Sbjct: 468 KSGRHSRAEELFEEMQQS--------GYSPCVM------TYNIMINSMGAQERWERVNDL 513
Query: 292 DDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN 351
+M +G LP++V + L++ K R D L ++ + P +Y+ LI
Sbjct: 514 LSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDA-IECLEVLKSMGFK--PTSTMYNALINA 570
Query: 352 CSN--------NEFK--SVVGLVKSF-SMRGLVN---------EAARAHDTMLEGNYKPD 391
+ N F+ + GL S ++ L+N EA M E KPD
Sbjct: 571 YAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 630
Query: 392 GAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERSWVIQ 451
Y L+ R HK +Y EMV G + L +ALR ++
Sbjct: 631 VVTYTTLMKALIRVDKFHKVPAVYEEMVMSGCTPDRKARAMLRSALR----------YVK 680
Query: 452 NTLRS 456
TLRS
Sbjct: 681 QTLRS 685
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 198/497 (39%), Gaps = 62/497 (12%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGV--GILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+ Q D Y+ IIK R++ + + + + D +I GF
Sbjct: 203 DGFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDIILGFSKAGDA 262
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
+A F KG+ P + T +++I AL + R EA LF+E+ P + L
Sbjct: 263 TRAMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNAL 322
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ G A + +M GVLPD TY+ ++ GR E A +L
Sbjct: 323 LKGYVKTGSLKDAEFVVSEMEKSGVLPD--------EHTYSLLVDAYAHAGRWESARIVL 374
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-------DRKV------VWG-- 253
+ M L P++ Y +++ + E +K++++ EM DR +G
Sbjct: 375 KEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKY 434
Query: 254 --LDEVTYAY---LMQGL-SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVID 307
LD + L +G+ D T+ +LI+ +C G + L +EM G P +
Sbjct: 435 NCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTY 494
Query: 308 SLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSF 367
+++IN + + R + L + + + +PN + Y TL++ +
Sbjct: 495 NIMINSMGAQERWERVNDLLSKMQSQGL---LPNAVTYTTLVD---------------IY 536
Query: 368 SMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHM 427
G N+A + + +KP +YN LI + +R +A N + M G +
Sbjct: 537 GKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSL 596
Query: 428 FSVLALLTAL----RDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIGATL 483
++ +L+ A RD + ++ +N ++ + + L K L +D KF + A
Sbjct: 597 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD--KFHKVPA-- 652
Query: 484 LDVLAEIAMDGLLLDGR 500
V E+ M G D +
Sbjct: 653 --VYEEMVMSGCTPDRK 667
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 50/325 (15%)
Query: 26 RFTAAR------NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYR 79
R+ +AR + ++Q + Y++I+ + +K +L+ M G+ PD Y
Sbjct: 366 RWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYN 425
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS- 138
+I F C A M +GI PD T+++LI C R S A LF+EM
Sbjct: 426 VMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQS 485
Query: 139 --PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT----------------- 179
P +T+ ++++ + + + + +M +G+LP+ VT
Sbjct: 486 GYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDA 545
Query: 180 ----------GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISG 229
GF P YNA+I+ G ++A+ R M GL+P ++ +I+
Sbjct: 546 IECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINA 605
Query: 230 FCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVL 289
F ++R +A+ + M V D VTY LM+ L D + KV
Sbjct: 606 FGEDRRDAEAFAVLQYMKENGV-KPDVVTYTTLMKALIRVDKF-------------HKVP 651
Query: 290 TLDDEMSHKGSLPDSVIDSLLINGL 314
+ +EM G PD ++L + L
Sbjct: 652 AVYEEMVMSGCTPDRKARAMLRSAL 676
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 140/358 (39%), Gaps = 47/358 (13%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA- 129
L+P L+Y +I N KA M + G PD YSS+I++L R+
Sbjct: 172 LTP--LTYNALIGACARNGDLEKALNLMSRMRRDGFQPDFINYSSIIKSLTRSNRIDSPI 229
Query: 130 -YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L+ E+ S D ++ G+ ++A MH + +G G SP
Sbjct: 230 LQKLYAEIESDKIEADGHLLNDIILGFSKAGDATRA--MHFLAVAQG------KGLSPKS 281
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
T A+I L GR EA + + E GL P +Y ++ G+ + L+ A + E
Sbjct: 282 GTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSE 341
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
M++ V L DE TY+ L++AY G + EM P+S
Sbjct: 342 MEKSGV--------------LPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSF 387
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVK 365
I S ++ K + + ++ M P+ Y+ +I+
Sbjct: 388 IYSRILASYRDKGEWQKS---FQVLKEMKMSGVQPDRHFYNVMID--------------- 429
Query: 366 SFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+F ++ A + ML +PD +N LI HC+ +A ++ EM + G+
Sbjct: 430 TFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGY 487
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 161/355 (45%), Gaps = 46/355 (12%)
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAY-EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSE 128
G+ P S ++ N+ A+ FK ++ +LP+ + + L++ALC +
Sbjct: 150 GIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEV 209
Query: 129 AYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
A + EM P+ +++TT++ G+ A + +++ +G +SP +
Sbjct: 210 AVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRG--------WSPDV 261
Query: 186 FTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
+Y ++ G C LG++ +A+ ++ M + G+ P+ V+Y ++I +C+ ++ +A L +
Sbjct: 262 TSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIED 321
Query: 246 MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG-SLPDS 304
M K D V + L +++ C +G + K + +S K L +
Sbjct: 322 MIAK-----DLVVGSELC---------CKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGA 367
Query: 305 VIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLV 364
V+ S LI+ L KK + + + + ++ S+ + + Y+TLI GL
Sbjct: 368 VVVSTLIHWLCKKGKVLEARN----VFDEFGKGSVASLLTYNTLI-----------AGLC 412
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
+ G + EAAR D M+E P+ YN+LI C+ N + + EM+
Sbjct: 413 EG----GELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEML 463
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 35/260 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ +Y ++ ++ + + R + ++G SPD SY ++ GFC A
Sbjct: 225 NVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVM 284
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTT-----LMHACC 153
M+ G+ P+ TY +IQA C +++ EA +L ++M++ D+ + ++ C
Sbjct: 285 DIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIA--KDLVVGSELCCKVVDLLC 342
Query: 154 LEGEFSKAFHMH--------------------HQMIHKG-------VLPDFVTGFSPALF 186
EG KA M H + KG V +F G +L
Sbjct: 343 EEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLL 402
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TYN +I GLC G + EA + M E G++P+A +Y ++I GFC+ ++ + EM
Sbjct: 403 TYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEM 462
Query: 247 DRKVVWGLDEVTYAYLMQGL 266
++ TY L+ G+
Sbjct: 463 LENRCLP-NKSTYTILIDGI 481
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 32/320 (10%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ ++ + N ++K C VE V +L M GL P+ +SY V+ GF A
Sbjct: 187 VLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAM 246
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHAC 152
+ E+ +G PD +Y+ L+ C +L +A + M P+++T+ ++ A
Sbjct: 247 KVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAY 306
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR--G 210
C E + +A ++ MI K D V G ++ LC G VE+A + R
Sbjct: 307 CKEKKSGEAVNLIEDMIAK----DLVVGSELCC----KVVDLLCEEGNVEKACEMWRMVS 358
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
GL+ AV +I C+ ++ +A + E + V A L+
Sbjct: 359 RKNCGLN-GAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSV--------ASLL------- 402
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
TY +LI C GEL + L D+M KG P++ ++LI G K K+ L +
Sbjct: 403 TYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEM 462
Query: 331 IADYMYTSMPNYIIYDTLIE 350
+ + +PN Y LI+
Sbjct: 463 LEN---RCLPNKSTYTILID 479
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 59/266 (22%)
Query: 3 LLRDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
+ R +K FR ++ G D+ +Y ++ C + ++ + +
Sbjct: 237 VWRGDMDGAMKVFREVLDRG-------------WSPDVTSYTVLVDGFCRLGKLVDAIRV 283
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGI---------------- 106
+ M + G+ P+ ++Y +I +C + G+A +M K +
Sbjct: 284 MDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCE 343
Query: 107 --------------------LPDAFTYSSLIQALCSKRRLSEAYHLFQEML--SPPDDIT 144
L A S+LI LC K ++ EA ++F E S +T
Sbjct: 344 EGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLT 403
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+ TL+ C GE +A + M+ KGV P+ FTYN +I G C +G +E
Sbjct: 404 YNTLIAGLCEGGELCEAARLWDDMVEKGVAPN--------AFTYNMLIKGFCKVGNAKEG 455
Query: 205 LGILRGMPEMGLSPDAVSYIIVISGF 230
+ +L M E P+ +Y I+I G
Sbjct: 456 IRVLEEMLENRCLPNKSTYTILIDGI 481
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 163/392 (41%), Gaps = 44/392 (11%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF----QEM 136
VI G+ P +A + L ++ GI P + ++L+ +L +R A+ +F +
Sbjct: 126 VIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERF 185
Query: 137 LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLC 196
P+ ++ L+ A C E A + +M G++P+ V+ Y ++ G
Sbjct: 186 RVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVS--------YTTVLGGFV 237
Query: 197 FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
+ G ++ A+ + R + + G SPD SY +++ GFC+ +L A + M+ G++
Sbjct: 238 WRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDN---GVE- 293
Query: 257 VTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
+E TY +I AYC + + + + L ++M K + S + +++ L +
Sbjct: 294 ----------PNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCE 343
Query: 317 KARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEA 376
+ + A M+ + +NC N V L+ +G V EA
Sbjct: 344 EGNVEK---------ACEMWRMVSR--------KNCGLNGAVVVSTLIHWLCKKGKVLEA 386
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
D +G+ YN LI C + +A ++ +MV G + F+ L+
Sbjct: 387 RNVFDEFGKGSVA-SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKG 445
Query: 437 LRDHGMYNERSWVIQNTLRSCNLNDSELHKVL 468
G E V++ L + L + + +L
Sbjct: 446 FCKVGNAKEGIRVLEEMLENRCLPNKSTYTIL 477
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
DL YN +++ C V++ + L M K + PDA +Y I +C+ A+
Sbjct: 247 DLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVL 306
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+M + +LP+ FTY+ +I+ LC +++ EAY L EM+S PD ++ + C
Sbjct: 307 DKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDH 366
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
E ++A + +M PD TYN ++ L +GR ++A + M +
Sbjct: 367 CEVNRALKLISRMEKDVCFPD--------RHTYNMVLKLLIRIGRFDKATEVWECMGDKK 418
Query: 216 LSPDAVSYIIVISGFCQNR 234
P +Y ++I G C+ +
Sbjct: 419 FYPSVSTYSVMIHGLCKKK 437
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 77 SYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM 136
+Y +I G+ GKA E M ++G D Y++L++ALC + EA +M
Sbjct: 215 TYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDM 274
Query: 137 LSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
LS PD T++ + + C AF + +M +LP+ +FTYN II
Sbjct: 275 LSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPN--------VFTYNCIIK 326
Query: 194 GLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG 253
LC + +VEEA +L M GL PD SY + + C + E+ +A +L M++ V
Sbjct: 327 RLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVC-- 384
Query: 254 LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
D TY ++ G K + + M K P S++I+G
Sbjct: 385 ------------FPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHG 432
Query: 314 L-DKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIE 350
L KK + ++ + ++I + +P YDT IE
Sbjct: 433 LCKKKGKLEEACKYFAMMIDE----GIPP---YDTTIE 463
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 24/229 (10%)
Query: 78 YRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML 137
+ + T + P A + MD+ GI P L+ LC K+ + +A F ++
Sbjct: 147 FWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVK 206
Query: 138 SP--PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
S T++ L++ G+ KA + M+ +G D L YN ++ L
Sbjct: 207 SHFLLTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVD--------LLAYNNLLEAL 258
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD 255
C G V+EA+ L M + PDA +Y I I +C + A+ + LD
Sbjct: 259 CKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGV-----------LD 307
Query: 256 EVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS 304
++ L+ + TY +I C ++ + L DEM G PD+
Sbjct: 308 KMRRCNLLPNVF---TYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDT 353
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 208 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 267
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 268 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 327
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 328 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 380
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 381 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 434
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 129 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 183
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 184 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 242
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 243 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 302
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 303 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 354
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 355 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 392
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 121 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 179
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 180 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 230
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 231 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 286
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 287 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 333
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 334 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 393
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 394 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 453
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 454 RYKTCRLLLDEVKQKNMH 471
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 225 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 284
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F +L++ G
Sbjct: 285 QAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRI 344
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A H + K +P +P TYN++I C+ + E A GIL+ M + GL
Sbjct: 345 DDATH-----VFKVAMPK--ASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD +Y +I + RE+ ++ +M K GLD TY L+ GL D
Sbjct: 398 PDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRAD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCRFTAARNSES------------IQQDLATYNKIIKQHC 51
+R TL T ++R RF AR + ++++ + N ++ C
Sbjct: 146 MRQESLITLNTIAKVMR-----RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
+ VE+ I + + ++P+A ++ +I G+CN R +A+ EM G P
Sbjct: 201 KEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI 259
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
+YS++IQ C ++ Y L EM + P+ +T+TT+M A +F +A + +M
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR-GMPEMGLSPDAVSYIIVI 227
G PD LF +N++I+ L GR+++A + + MP+ ++P+ +Y +I
Sbjct: 320 NAVGCRPD-------TLF-FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Query: 228 SGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG 265
S FC + +A+ + EM++ + D TY L++
Sbjct: 372 SMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 54/378 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 138 KMREILEEMRQESLIT-LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 197 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 247
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 248 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 303
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + LI L + R D A +
Sbjct: 304 -----------AKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDD--ATHV 350
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A + PN Y+++I C + + G++K GL + + +++
Sbjct: 351 FKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSC 410
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y LLI R A++++ EM V
Sbjct: 411 FKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Query: 426 HMFSVLALLTALRDHGMY 443
+ LL ++ M+
Sbjct: 471 RYKTCRLLLDEVKQKNMH 488
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 25/248 (10%)
Query: 5 RDSFTATLKTFRHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQ------HCLMQRVEK 58
R + K R +V+ V+ F + + ++ +N I K+ H + V++
Sbjct: 42 RAALQVLRKIERILVKPNVLIYFLV----KEVDREKYVFNTISKKGVKPNLHMYNKMVDE 97
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
V +L M K ++PD +Y +I G C + ++ EM ++G + TY+SL+
Sbjct: 98 AVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITYNSLLD 157
Query: 119 ALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
ALC H ++ P+ T+T L+ C G+ A ++ ++ KG D +
Sbjct: 158 ALCKN-------HQIKDQGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYHLDVI 210
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
YN +++ LC G +EAL IL M +PD V+Y IVI +N + K
Sbjct: 211 --------MYNVMVNWLCKEGLFDEALSILSKMEHNNCTPDVVTYEIVIRALFKNVKNDK 262
Query: 239 AYELKVEM 246
A +L EM
Sbjct: 263 AVKLLCEM 270
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 52 LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAF 111
L++ V++ + +++KG+ P+ Y N+ +A EM K + PD F
Sbjct: 65 LVKEVDREKYVFNTISKKGVKPNLHMY---------NKMVDEAVNLLNEMHSKRMTPDTF 115
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQM 168
TY+SLI LC R S+ + L EM P + IT+ +L+ A C +HQ+
Sbjct: 116 TYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITYNSLLDALC----------KNHQI 165
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+G+ P L+TY ++ G+C G++++A + + + G D + Y ++++
Sbjct: 166 KDQGI--------QPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYHLDVIMYNVMVN 217
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
C+ +A + +M+ D VTY +++ L
Sbjct: 218 WLCKEGLFDEALSILSKMEHNNC-TPDVVTYEIVIRAL 254
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 38/270 (14%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS----GFCQNRE 235
GF +Y +I+ LC G AL +LR + + + P+ + Y +V + N
Sbjct: 20 GFKLDHVSYRTLINELCKTGETRAALQVLRKIERILVKPNVLIYFLVKEVDREKYVFNTI 79
Query: 236 LRKAYELKVEMDRKVV-WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDE 294
+K + + M K+V ++ + + + D TY SLI+ C G V L DE
Sbjct: 80 SKKGVKPNLHMYNKMVDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDE 139
Query: 295 MSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN-CS 353
M +G + + + L++ L K + KD PN Y L++ C
Sbjct: 140 MHERGQPANVITYNSLLDALCKNHQIKDQGIQ-------------PNLYTYTLLVDGICK 186
Query: 354 NNEFKSVVG-----LVKSFSM--------------RGLVNEAARAHDTMLEGNYKPDGAV 394
N + K L+K + + GL +EA M N PD
Sbjct: 187 NGKLKDAKAVYQDLLIKGYHLDVIMYNVMVNWLCKEGLFDEALSILSKMEHNNCTPDVVT 246
Query: 395 YNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
Y ++I + + KA + EM+ G +
Sbjct: 247 YEIVIRALFKNVKNDKAVKLLCEMIDRGLL 276
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGIL-PDAFTYSSLIQALCSKR 124
M +G +P+ +++ +I G C + KA E LEM + L PD FT+S +I LC +
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKARE-PLEMLLENRLKPDIFTFSCIIDGLCRLK 59
Query: 125 RLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGF 181
R EA+ F EM+ P+ I + L+ + C GE +++ + +M +G+ PD
Sbjct: 60 RTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPD----- 114
Query: 182 SPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYE 241
+++YNA+I C + +VE+A + M + G +PD +Y I+ ++ L +A +
Sbjct: 115 ---IYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKK 171
Query: 242 L 242
+
Sbjct: 172 M 172
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L T+N +I HC + K L + E L PD ++ +I G C + +A+E
Sbjct: 9 NLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECF 68
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
EM + G+ P+A Y+ LI++LCS + + L + M PD ++ L+ C
Sbjct: 69 NEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRM 128
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
+ KA + M +GF+P +TY+A I L GR+EEA + + G
Sbjct: 129 NKVEKAKKLFDSMSK--------SGFNPDNYTYSAFIAALSESGRLEEAKKMFYSIEANG 180
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYEL 242
SPD+ +VI ++ + +A ++
Sbjct: 181 CSPDSYVCNLVIKALVRHDRVEEAQKI 207
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 25/227 (11%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M +G P+ T++ LI C + +A + +L PD TF+ ++ C
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKR 60
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+AF ++M+ GV P+ + YN +I LC +G ++ +LR M E G+S
Sbjct: 61 TEEAFECFNEMVEWGVNPNAII--------YNILIRSLCSIGETTRSVKLLRRMQEEGIS 112
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD SY +I FC+ ++ KA +L M + G + Y TY++ I
Sbjct: 113 PDIYSYNALIQIFCRMNKVEKAKKLFDSMSKS---GFNPDNY-----------TYSAFIA 158
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
A G L + + + G PDS + +L+I L + R ++ +
Sbjct: 159 ALSESGRLEEAKKMFYSIEANGCSPDSYVCNLVIKALVRHDRVEEAQ 205
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
++ D+ T++ II C ++R E+ M E G++P+A+ Y +I C+ ++
Sbjct: 41 LKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSV 100
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHAC 152
+ M ++GI PD ++Y++LIQ C ++ +A LF M PD+ T++ + A
Sbjct: 101 KLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAAL 160
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
G +A M + + G PD + N +I L RVEEA I+
Sbjct: 161 SESGRLEEAKKMFYSIEANGCSPDS--------YVCNLVIKALVRHDRVEEAQKIVERCR 212
Query: 213 EMGLS 217
+ G++
Sbjct: 213 QKGIA 217
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 101/273 (36%), Gaps = 77/273 (28%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P+ +TF L++ C +G KA ++ + PD +FT++ II GLC L
Sbjct: 8 PNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPD--------IFTFSCIIDGLCRLK 59
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
R EEA M E G++P+A+ Y I+I C E ++ +L M
Sbjct: 60 RTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQE----------- 108
Query: 260 AYLMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+G+S D +Y +LI +C ++ K L D MS G PD
Sbjct: 109 ----EGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPD--------------- 149
Query: 319 RTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAAR 378
+Y Y++ + + S G + EA +
Sbjct: 150 --------------NYTYSA------------------------FIAALSESGRLEEAKK 171
Query: 379 AHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKA 411
++ PD V NL+I R V +A
Sbjct: 172 MFYSIEANGCSPDSYVCNLVIKALVRHDRVEEA 204
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 20/176 (11%)
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
T+ LIN +C G + K + + PD S +I+GL + RT++ +
Sbjct: 12 TFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEM 71
Query: 331 IADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYK 389
+ + PN IIY+ LI + CS E V L++ G+
Sbjct: 72 VE---WGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGI----------------S 112
Query: 390 PDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNE 445
PD YN LI CR V KA ++ M + GF ++ A + AL + G E
Sbjct: 113 PDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEE 168
>Medtr3g108060.1 | PPR containing plant-like protein | HC |
chr3:49927588-49930323 | 20130731
Length = 441
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML-----SPPDDITFTTLMHACCL 154
M Q G PD Y++LI A+CS ++A HL Q+M SPPD T+T L+ + C
Sbjct: 178 RMRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPDVFTYTVLISSYCR 237
Query: 155 EG------------EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
G +A + M+ KG++PD V YNA+I G C RV
Sbjct: 238 YGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVA--------YNALIDGCCKTYRVG 289
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
AL + M + G P+ V+Y I + E+ KA E EM R G + +
Sbjct: 290 RALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQRSNYDGENGIV---- 345
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKA 318
+ +Y +I+A C G + + E+ GS+P L+ +GL K
Sbjct: 346 ---VGSCSSYTPIIHALCEVGRVADAWSFLVELIDNGSVPREYTYKLVCDGLRLKG 398
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 45/204 (22%)
Query: 39 DLATYNKIIKQHC------------LMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
D+ TY +I +C + +R+ + + R M KG+ PD ++Y +I G C
Sbjct: 224 DVFTYTVLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYNALIDGCC 283
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFT 146
G+A E +M ++G +P+ TY S I+ + +A +EM D
Sbjct: 284 KTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQRSNYD---- 339
Query: 147 TLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALG 206
GE G++ + ++P IIH LC +GRV +A
Sbjct: 340 ---------GE-------------NGIVVGSCSSYTP-------IIHALCEVGRVADAWS 370
Query: 207 ILRGMPEMGLSPDAVSYIIVISGF 230
L + + G P +Y +V G
Sbjct: 371 FLVELIDNGSVPREYTYKLVCDGL 394
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 189/446 (42%), Gaps = 56/446 (12%)
Query: 35 SIQQDLATYNKIIKQ--HCLMQRVEKGVGI-LRGMAEKGLSPDALSYRYVITGFCNNRCP 91
++QQ AT +++ L + ++G+ + + AE ++ Y ++ + N
Sbjct: 221 TMQQWYATNARMVATILSVLGKANQEGIAVEIFAKAESVIADTVQVYNAMMGVYARNGNF 280
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-------PDDIT 144
K E M ++G PD ++++LI A + + L E+L PD IT
Sbjct: 281 EKVNEMFNLMRERGCEPDIVSFNTLINAKV--KSCATVSGLAIELLDEVGKFGLRPDIIT 338
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAII--HGLCFLGRVE 202
+ TL+ AC E +A + M PD L+TYNA+I +G C G
Sbjct: 339 YNTLISACSRESNLKEAIGVFSHMESNRCQPD--------LWTYNAMISVYGRC--GFAL 388
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+A + + G SPDAV+Y ++ F + K ++ EM K+ +G DE+TY
Sbjct: 389 KAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM-VKMGFGKDEMTYN-- 445
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
++I+ Y G + L L +M G PD+V ++LI+ L K ++ ++
Sbjct: 446 -----------TIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEE 494
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
A + + M + + TL + L+ +++ G EA +
Sbjct: 495 ---------ASKVMSEMLDAGVKPTL---------HTYSALICAYAKVGRRVEAEETFNR 536
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
M E K D Y++++ R + KA +Y EM+ GF +L AL M
Sbjct: 537 MRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENM 596
Query: 443 YNERSWVIQNTLRSCNLNDSELHKVL 468
+ V+Q+T ++N ++ VL
Sbjct: 597 GDVIERVVQDTKELGSMNPHDISSVL 622
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
S Q DL TYN +I + K + + G SPDA++Y ++ F
Sbjct: 364 SNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTE 423
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
K + EM + G D TY+++I R EA L+++M S PD +T+T L+
Sbjct: 424 KVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLI 483
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ +A + +M+ GV P L TY+A+I +GR EA
Sbjct: 484 DLLGKASKIEEASKVMSEMLDAGV--------KPTLHTYSALICAYAKVGRRVEAEETFN 535
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
M E G+ D ++Y +++ F + E++KA L EM
Sbjct: 536 RMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEM 572
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 127/315 (40%), Gaps = 46/315 (14%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNN- 88
A+ I + YN ++ + EK + M E+G PD +S+ +I +
Sbjct: 254 AKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSC 313
Query: 89 -RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDIT 144
G A E E+ + G+ PD TY++LI A + L EA +F M S PD T
Sbjct: 314 ATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWT 373
Query: 145 FTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVT------------------------- 179
+ ++ G KA H+ ++ G PD VT
Sbjct: 374 YNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMV 433
Query: 180 --GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
GF TYN IIH GR +EAL + R M G +PDAV+Y ++I + ++
Sbjct: 434 KMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIE 493
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+A ++ EM LD L TY++LI AY G + + M
Sbjct: 494 EASKVMSEM-------LDAGVKPTL-------HTYSALICAYAKVGRRVEAEETFNRMRE 539
Query: 298 KGSLPDSVIDSLLIN 312
G D + S++++
Sbjct: 540 SGIKADHLAYSVMLD 554
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 8 FTATLKTFRHMVRNGVVCRFTAARN---------SESIQQDLATYNKIIKQHCLMQRVEK 58
+ T+ +R M+ G++CRF R+ + DL +N ++K + ++ +
Sbjct: 925 YFPTMHLYRLMI--GLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQN 982
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQ 118
I + + + GL+PD +Y +IT +C + P + +M G+ P TY S+I
Sbjct: 983 MGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIA 1042
Query: 119 ALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP 175
A ++ +A LF+E+ S D + +M G+ KA ++ M G+ P
Sbjct: 1043 AFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEP 1102
Query: 176 DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRE 235
+ T + +Y G+ EEA IL+ + MG D + Y VI + + +
Sbjct: 1103 NTAT-MHLLMVSYGKS-------GQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGD 1154
Query: 236 LRKAYELKVEMDRKVV 251
+ E EM +
Sbjct: 1155 AKAGIEKLTEMKEAAI 1170
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 25/260 (9%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
II+ + ++ + I+ + ++ D + +I + + C +A M ++G
Sbjct: 795 IIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREG 854
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMH 165
P + + L+QAL RLSE Y + QE+ I+ ++++ LE F++A ++
Sbjct: 855 PSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSIL--LMLEA-FAQAGNLF 911
Query: 166 H-QMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYI 224
Q ++ G+ G+ P + Y +I LC RV + +L M E G PD +
Sbjct: 912 EVQKVYNGMK---AAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFN 968
Query: 225 IVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQ-GLS-DEDTYASLINAYCAQ 282
V+ + E + V Y + GL+ DE+TY +LI YC
Sbjct: 969 SVLKLYSSIEEFQNM----------------GVIYQMIQDAGLAPDEETYNTLITMYCRD 1012
Query: 283 GELFKVLTLDDEMSHKGSLP 302
+ L+L +M G P
Sbjct: 1013 HRPEEGLSLMHKMKSLGLEP 1032
>Medtr7g029515.1 | PPR containing plant protein | HC |
chr7:10579080-10580534 | 20130731
Length = 484
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+N +I C ++RVE+ ++ M G P +SY +I +C + + Y+ EM
Sbjct: 208 TFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEM 267
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+ P+ TY++++ AL + EA + + M + PD + F + ++ G
Sbjct: 268 QAQNCSPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTLGRAGRI 327
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL-S 217
A + + K +P +P TYN+++ C+ R E A GIL+ M + GL
Sbjct: 328 DDATY-----VFKVAMPK--ANVAPNTSTYNSMVSMFCYYAREERAFGILKEMEKSGLCK 380
Query: 218 PDAVSYIIVISGFCQNRELRKAY-ELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
PD ++ +I + RE+ ++ +M K GLD TY+ L+ GL D
Sbjct: 381 PDIQTFHPLIKSCFKMREIDTWLNDILNDMVNKYQIGLDLSTYSLLIHGLCRAD 434
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 149/379 (39%), Gaps = 54/379 (14%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLM 149
K E EM Q+ ++ T + +++ R+ +A +F ++ + + L+
Sbjct: 121 KMREILEEMRQESLIT-LDTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 179
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C E +A ++ ++ H +P T+N +IHG C + RVEEA ++
Sbjct: 180 DTLCKEKFVEQAREIYLELKHY---------IAPNAHTFNILIHGWCNIRRVEEAHWTIQ 230
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M G P +SY +I +CQ + + Y+L EM + + VTY +M L
Sbjct: 231 EMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNC-SPNVVTYTTIMCAL--- 286
Query: 270 DTYASLINAYCAQGELF-KVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
A+ E F + L + + M+ G PD++ + I L + R D A +
Sbjct: 287 -----------AKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTLGRAGRIDD--ATYV 333
Query: 329 LIIADYMYTSMPNYIIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
+A PN Y++++ C + G++K GL + +++
Sbjct: 334 FKVAMPKANVAPNTSTYNSMVSMFCYYAREERAFGILKEMEKSGLCKPDIQTFHPLIKSC 393
Query: 388 YKP----------------------DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS 425
+K D + Y+LLI CR A++++ EMV V
Sbjct: 394 FKMREIDTWLNDILNDMVNKYQIGLDLSTYSLLIHGLCRADRCKWAFDLFEEMVDQDIVP 453
Query: 426 HMFSVLALLTALRDHGMYN 444
+ LL ++ MY
Sbjct: 454 RYKTCRLLLDEVKQKNMYQ 472
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 175/393 (44%), Gaps = 58/393 (14%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSS 115
+++ VG+++ + GL +A SY+ ++ G+ R KA+ L+M + G D F ++
Sbjct: 172 LDRCVGLVK---KWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNM 228
Query: 116 LIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
L+ AL +++ +AY +F++M PD T+T ++ G+ ++ + M+ K
Sbjct: 229 LLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEK- 287
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
GF+ L YN +I L ++A+ + M E G P+ +Y ++++
Sbjct: 288 -------GFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVA 340
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS----------------------DED 270
+L K + VEM +K +++ YAY ++ LS D+D
Sbjct: 341 EGQLNKLDNI-VEMSKKY---MNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKD 396
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLI 330
Y S++ + C+ G++ + + L + K D+++ + + L + + +H+
Sbjct: 397 AYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQV----SHI--- 449
Query: 331 IADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKP 390
+ +Y+ + ++ + + L+ S+ G V+ A + + + N +P
Sbjct: 450 -----------HDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQP 498
Query: 391 DGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
D YN LI + +V +A+ + EM G
Sbjct: 499 DVISYNSLINCLGKNGDVDEAHMRFKEMQEKGL 531
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D Y +++ C ++ + + +L EK ++ D + Y V T + ++
Sbjct: 394 DKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLY 453
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+M Q G PD FTY+ LI + R+ A +F+E+ + PD I++ +L++
Sbjct: 454 EKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKN 513
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALFTY 188
G+ +A +M KG+ PD VT G SP L TY
Sbjct: 514 GDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTY 573
Query: 189 NAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIV 226
N ++ L GR EA+ + + + GL+PD+++Y ++
Sbjct: 574 NILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 180/456 (39%), Gaps = 86/456 (18%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE-- 96
D+ +N ++ Q+V+K + M + PD +Y +I R GKA +
Sbjct: 222 DIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMI------RMTGKAGKTD 275
Query: 97 -----FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTL 148
F+ M +KG + Y+++I+AL R +A LF +M+ P++ T++ L
Sbjct: 276 ESLALFQ-AMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVL 334
Query: 149 MHACCLEGEFSK---AFHMHHQMIHKGVLPDFVTGFSP--------ALF----------- 186
++ EG+ +K M + ++K + FV S LF
Sbjct: 335 LNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGD 394
Query: 187 --TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKV 244
Y +++ LC G++ EA+ +L E ++ D + Y V + + +++ ++L
Sbjct: 395 KDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDL-- 452
Query: 245 EMDRKVVWGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHKGSLP 302
Y + Q D TY LI++Y G + + + +E+ + P
Sbjct: 453 --------------YEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQP 498
Query: 303 DSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVG 362
D + + LIN L K + AH+ + P+ + Y TLIE
Sbjct: 499 DVISYNSLINCLGKNGDVDE--AHMRFKEMQEKGLN-PDVVTYSTLIE------------ 543
Query: 363 LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYG 422
F V A D M+ P+ YN+L+ R +A ++Y ++ + G
Sbjct: 544 ---CFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQG 600
Query: 423 FV--SHMFSVLALLTALRDHGMYNER------SWVI 450
S ++VL L + R HG R WV+
Sbjct: 601 LTPDSITYAVLERLQSGR-HGKLRVRRQNPITGWVV 635
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 21 NGVVCRFTAARNSESIQQ-----------DLATYNKIIKQHCLMQRVEKGVGILRGMAEK 69
NG++ +RN Q+ D TY+ +++ + K + M
Sbjct: 170 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSA 229
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G +PD ++Y ++ C +A E EMD P +F YS L+ + R+ +A
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+F EM D + + L+ A C + + +M G+ P+ T
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTC------ 343
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
N I+ L G ++A + R M ++ PDA +Y ++I FC+ E+ A +
Sbjct: 344 --NVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALK----- 395
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+W Y Q + T++ LIN CA+G K L +EM KG P +
Sbjct: 396 ----IW-----KYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
Query: 307 DSLLINGLDKKAR 319
L L K+ R
Sbjct: 447 FGKLRQLLIKEGR 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 44/331 (13%)
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMHAC 152
Y F + MD+ + ++ L+ ALC R + +A +F M PD T++ L+
Sbjct: 152 YTFNV-MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGW 210
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
E KA + +M+ G PD VT Y ++ LC GRV+EA+ +++ M
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVT--------YGIMVDILCKAGRVDEAVEVVKEMD 262
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ P + Y +++ + + A ++ +EM++ + +D Y
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGI--------------AADVVVY 308
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LI A+C +L V + EM G P+S +++++ L + T
Sbjct: 309 NALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKA--------- 359
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ ++ +I+ C + + L+K F R V+ A + M + P
Sbjct: 360 ---------FSVFRRMIKLCEPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSL 409
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+++LI C + N KA + EM+ G
Sbjct: 410 HTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 45/340 (13%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
Y +I++L R+ Y + E+++ + C + ++++A + +
Sbjct: 100 YHLMIESLAKIRQ----YQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFN 155
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
V+ + T + A F N ++ LC V +A I M + PD+ +Y I++ G+ +
Sbjct: 156 VMDKYDTPQNLAAF--NGLLSALCKSRNVRKAQEIFDSM-KGRFEPDSKTYSILLEGWGK 212
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
L KA E+ EM V G + D TY +++ C G + + + +
Sbjct: 213 EPNLPKAREVFGEM---VSAGCN-----------PDIVTYGIMVDILCKAGRVDEAVEVV 258
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN- 351
EM P S I S+L++ ++R +D + + + + + ++Y+ LI
Sbjct: 259 KEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA---DVVVYNALIGAF 315
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML----EGNY--------------KPDGA 393
C N+ K+V ++K G+ + + M +G +PD
Sbjct: 316 CKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS--HMFSVL 431
Y +LI C R V A ++ M FV H FSVL
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 21 NGVVCRFTAARNSESIQQ-----------DLATYNKIIKQHCLMQRVEKGVGILRGMAEK 69
NG++ +RN Q+ D TY+ +++ + K + M
Sbjct: 170 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSA 229
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G +PD ++Y ++ C +A E EMD P +F YS L+ + R+ +A
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+F EM D + + L+ A C + + +M G+ P+ T
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTC------ 343
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
N I+ L G ++A + R M ++ PDA +Y ++I FC+ E+ A +
Sbjct: 344 --NVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALK----- 395
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+W Y Q + T++ LIN CA+G K L +EM KG P +
Sbjct: 396 ----IW-----KYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
Query: 307 DSLLINGLDKKAR 319
L L K+ R
Sbjct: 447 FGKLRQLLIKEGR 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 44/331 (13%)
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMHAC 152
Y F + MD+ + ++ L+ ALC R + +A +F M PD T++ L+
Sbjct: 152 YTFNV-MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGW 210
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
E KA + +M+ G PD VT Y ++ LC GRV+EA+ +++ M
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVT--------YGIMVDILCKAGRVDEAVEVVKEMD 262
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ P + Y +++ + + A ++ +EM++ + +D Y
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGI--------------AADVVVY 308
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LI A+C +L V + EM G P+S +++++ L + T
Sbjct: 309 NALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKA--------- 359
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ ++ +I+ C + + L+K F R V+ A + M + P
Sbjct: 360 ---------FSVFRRMIKLCEPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSL 409
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+++LI C + N KA + EM+ G
Sbjct: 410 HTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 45/340 (13%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
Y +I++L R+ Y + E+++ + C + ++++A + +
Sbjct: 100 YHLMIESLAKIRQ----YQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFN 155
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
V+ + T + A F N ++ LC V +A I M + PD+ +Y I++ G+ +
Sbjct: 156 VMDKYDTPQNLAAF--NGLLSALCKSRNVRKAQEIFDSM-KGRFEPDSKTYSILLEGWGK 212
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
L KA E+ EM V G + D TY +++ C G + + + +
Sbjct: 213 EPNLPKAREVFGEM---VSAGCN-----------PDIVTYGIMVDILCKAGRVDEAVEVV 258
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN- 351
EM P S I S+L++ ++R +D + + + + + ++Y+ LI
Sbjct: 259 KEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA---DVVVYNALIGAF 315
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML----EGNY--------------KPDGA 393
C N+ K+V ++K G+ + + M +G +PD
Sbjct: 316 CKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS--HMFSVL 431
Y +LI C R V A ++ M FV H FSVL
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 21 NGVVCRFTAARNSESIQQ-----------DLATYNKIIKQHCLMQRVEKGVGILRGMAEK 69
NG++ +RN Q+ D TY+ +++ + K + M
Sbjct: 170 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSA 229
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G +PD ++Y ++ C +A E EMD P +F YS L+ + R+ +A
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+F EM D + + L+ A C + + +M G+ P+ T
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTC------ 343
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
N I+ L G ++A + R M ++ PDA +Y ++I FC+ E+ A +
Sbjct: 344 --NVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALK----- 395
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+W Y Q + T++ LIN CA+G K L +EM KG P +
Sbjct: 396 ----IW-----KYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
Query: 307 DSLLINGLDKKAR 319
L L K+ R
Sbjct: 447 FGKLRQLLIKEGR 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 44/331 (13%)
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMHAC 152
Y F + MD+ + ++ L+ ALC R + +A +F M PD T++ L+
Sbjct: 152 YTFNV-MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGW 210
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
E KA + +M+ G PD VT Y ++ LC GRV+EA+ +++ M
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVT--------YGIMVDILCKAGRVDEAVEVVKEMD 262
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ P + Y +++ + + A ++ +EM++ + +D Y
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGI--------------AADVVVY 308
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LI A+C +L V + EM G P+S +++++ L + T
Sbjct: 309 NALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKA--------- 359
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ ++ +I+ C + + L+K F R V+ A + M + P
Sbjct: 360 ---------FSVFRRMIKLCEPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSL 409
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+++LI C + N KA + EM+ G
Sbjct: 410 HTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 45/340 (13%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
Y +I++L R+ Y + E+++ + C + ++++A + +
Sbjct: 100 YHLMIESLAKIRQ----YQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFN 155
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
V+ + T + A F N ++ LC V +A I M + PD+ +Y I++ G+ +
Sbjct: 156 VMDKYDTPQNLAAF--NGLLSALCKSRNVRKAQEIFDSM-KGRFEPDSKTYSILLEGWGK 212
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
L KA E+ EM V G + D TY +++ C G + + + +
Sbjct: 213 EPNLPKAREVFGEM---VSAGCN-----------PDIVTYGIMVDILCKAGRVDEAVEVV 258
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN- 351
EM P S I S+L++ ++R +D + + + + + ++Y+ LI
Sbjct: 259 KEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA---DVVVYNALIGAF 315
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML----EGNY--------------KPDGA 393
C N+ K+V ++K G+ + + M +G +PD
Sbjct: 316 CKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS--HMFSVL 431
Y +LI C R V A ++ M FV H FSVL
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 21 NGVVCRFTAARNSESIQQ-----------DLATYNKIIKQHCLMQRVEKGVGILRGMAEK 69
NG++ +RN Q+ D TY+ +++ + K + M
Sbjct: 170 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSA 229
Query: 70 GLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEA 129
G +PD ++Y ++ C +A E EMD P +F YS L+ + R+ +A
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 130 YHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALF 186
+F EM D + + L+ A C + + +M G+ P+ T
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTC------ 343
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
N I+ L G ++A + R M ++ PDA +Y ++I FC+ E+ A +
Sbjct: 344 --NVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALK----- 395
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+W Y Q + T++ LIN CA+G K L +EM KG P +
Sbjct: 396 ----IW-----KYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
Query: 307 DSLLINGLDKKAR 319
L L K+ R
Sbjct: 447 FGKLRQLLIKEGR 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 44/331 (13%)
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS--PPDDITFTTLMHAC 152
Y F + MD+ + ++ L+ ALC R + +A +F M PD T++ L+
Sbjct: 152 YTFNV-MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGW 210
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMP 212
E KA + +M+ G PD VT Y ++ LC GRV+EA+ +++ M
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVT--------YGIMVDILCKAGRVDEAVEVVKEMD 262
Query: 213 EMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
+ P + Y +++ + + A ++ +EM++ + +D Y
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGI--------------AADVVVY 308
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
+LI A+C +L V + EM G P+S +++++ L + T
Sbjct: 309 NALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKA--------- 359
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
+ ++ +I+ C + + L+K F R V+ A + M + P
Sbjct: 360 ---------FSVFRRMIKLCEPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSL 409
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+++LI C + N KA + EM+ G
Sbjct: 410 HTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 45/340 (13%)
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
Y +I++L R+ Y + E+++ + C + ++++A + +
Sbjct: 100 YHLMIESLAKIRQ----YQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFN 155
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
V+ + T + A F N ++ LC V +A I M + PD+ +Y I++ G+ +
Sbjct: 156 VMDKYDTPQNLAAF--NGLLSALCKSRNVRKAQEIFDSM-KGRFEPDSKTYSILLEGWGK 212
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
L KA E+ EM V G + D TY +++ C G + + + +
Sbjct: 213 EPNLPKAREVFGEM---VSAGCN-----------PDIVTYGIMVDILCKAGRVDEAVEVV 258
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIEN- 351
EM P S I S+L++ ++R +D + + + + + ++Y+ LI
Sbjct: 259 KEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA---DVVVYNALIGAF 315
Query: 352 CSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML----EGNY--------------KPDGA 393
C N+ K+V ++K G+ + + M +G +PD
Sbjct: 316 CKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVS--HMFSVL 431
Y +LI C R V A ++ M FV H FSVL
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
>Medtr1g113010.1 | PPR containing plant-like protein | HC |
chr1:51277135-51279295 | 20130731
Length = 630
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 22/297 (7%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
L T+ +IK R+++ + I M G +PD L Y Y++ G +
Sbjct: 204 LTTFRILIKGLVDNNRLDRALDIKNQMHALGFAPDPLVYHYLMLGHARSSDGYGVLRVYQ 263
Query: 100 EMDQK--GILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCL 154
E+ +K G++ D L++ K EA +QE+ DI + +++ A
Sbjct: 264 ELKEKLGGVVEDGVVLGCLMKGYFLKGMEKEAMECYQEVFVEGKKMSDIAYNSVLDALAK 323
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G+F +A + ++MI + P + L ++N ++ G C G+ +EA+ I R M E
Sbjct: 324 NGKFDEAMKLFNRMIKEHNPP---AKLAVNLGSFNVMVDGYCAEGKFKEAIEIFRSMGES 380
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYAS 274
PD +S+ +I C N + +A E+ EM+ K V DE TY LM E
Sbjct: 381 RCKPDTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGV-NHDEYTYGLLMDTCFKE----- 434
Query: 275 LINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
N FK +M G P+ + + L++GL K +T D K+ L++
Sbjct: 435 --NRPDDAASYFK------KMVESGLRPNLAVYNRLVDGLVKVGKTDDAKSFFDLMV 483
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 40/166 (24%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L ++N ++ +C + ++ + I R M E PD LS+ +I CNN +A E
Sbjct: 350 NLGSFNVMVDGYCAEGKFKEAIEIFRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVY 409
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEF 158
EM+ KG+ D +TY L+ + R +A F++M+
Sbjct: 410 GEMEGKGVNHDEYTYGLLMDTCFKENRPDDAASYFKKMVE-------------------- 449
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+G P L YN ++ GL +G+ ++A
Sbjct: 450 --------------------SGLRPNLAVYNRLVDGLVKVGKTDDA 475
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 186/447 (41%), Gaps = 66/447 (14%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
+ D TYN+++ + ++G ++ MA KG+ P+A++Y VI + KA E
Sbjct: 375 EPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALE 434
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACC 153
+M + G +P+ TY++++ L + R + + +M PPD IT+ T++ C
Sbjct: 435 VFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCG 494
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFSPALF 186
+G+ + +M + G PD T GF+P +
Sbjct: 495 EKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCIT 554
Query: 187 TYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM 246
TYNA+++ L G + A ++ M + G P+ SY +++ + + +R KVEM
Sbjct: 555 TYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLE--KVEM 612
Query: 247 DRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVI 306
+ ++ L++ L L N C Q L + ++ + G D V+
Sbjct: 613 E---IYDGHVFPSWMLLRTL-------VLTNYKCRQ--LKGMERAFHQLQNNGYKLDMVV 660
Query: 307 DSLLINGLDKKARTKDTKAHLLLIIADYMYTS--MPNYIIYDTLIENCSNNEFKSVVGLV 364
+ +++ + + + KAH +L D ++ S PN + Y++LI+
Sbjct: 661 INSMLSMFVRNQKLE--KAHEML---DVIHVSGLQPNLVTYNSLID-------------- 701
Query: 365 KSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
++ G +A + PD YN +I C++ V +A + EM G
Sbjct: 702 -LYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQ 760
Query: 425 SHMFSVLALLTALRDHGMYNERSWVIQ 451
+ ++ +G++ E VI+
Sbjct: 761 PCPITFNTFMSCYAGNGLFAEADEVIR 787
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 46/363 (12%)
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCS-KRRLSEAYHLFQEMLSPP---DDITFTTL 148
+A E +M + G+ P TY+ ++ R S L EM S D+ T TT+
Sbjct: 255 RAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTV 314
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ AC EG +A + + G+ P TYN+++ G EAL IL
Sbjct: 315 ISACGREGILDEARRFFDDLK--------LNGYKPGTATYNSMLQVFGKAGVYTEALNIL 366
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD 268
+ M + PDA++Y +++ + + + + M K V + +
Sbjct: 367 KEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGV--------------MPN 412
Query: 269 EDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLL 328
TY ++INAY G+ K L + +M G +P+ + ++ L K++R++D ++
Sbjct: 413 AITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSED----MI 468
Query: 329 LIIADYMYTSM-PNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGN 387
I+ D P+ I ++T++ C + V V +R + N
Sbjct: 469 KILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQV----LREMKN-----------CG 513
Query: 388 YKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGMYNERS 447
++PD +N LI + R + MY EMV GF + + ALL AL G +
Sbjct: 514 FEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAE 573
Query: 448 WVI 450
V+
Sbjct: 574 SVV 576
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D+ N ++ Q++EK +L + GL P+ ++Y +I + KA E
Sbjct: 657 DMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEML 716
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++ GI PD +Y+++I+ C K + EA + EM + P ITF T M
Sbjct: 717 KDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGN 776
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G F++A + MI G +P+ + TY +I G + +EA+ + + E+
Sbjct: 777 GLFAEADEVIRYMIEHGCMPNEL--------TYKIVIDGYIKAKKHKEAMDFVSKIKEID 828
Query: 216 LSPDAVS 222
+S D S
Sbjct: 829 ISFDDQS 835
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 41/318 (12%)
Query: 40 LATYNKIIKQHCLMQRVEKGV-GILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
L TYN ++ + M R + +L M KGL D + VI+ +A F
Sbjct: 272 LVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFF 331
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLE 155
++ G P TY+S++Q +EA ++ +EM PD IT+ L+ A
Sbjct: 332 DDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRA 391
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G + + M KGV+P+ + TY +I+ G ++AL + M E+G
Sbjct: 392 GFHDEGAAVIDTMASKGVMPNAI--------TYTTVINAYGKAGDADKALEVFGQMKELG 443
Query: 216 LSPDAVSY--IIVISGFCQNRELRKAYELKVEMDRK--------VVWGL------DEVTY 259
P+ +Y ++V+ G + R +K+ D K + W ++
Sbjct: 444 CVPNVCTYNNVLVLLG----KRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQ 499
Query: 260 AYLMQGL---------SDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLL 310
++ Q L D++T+ +LI+AY G V + EM G P + L
Sbjct: 500 KFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNAL 559
Query: 311 INGLDKKARTKDTKAHLL 328
+N L ++ K ++ +L
Sbjct: 560 LNALARRGNWKAAESVVL 577
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 115/286 (40%), Gaps = 25/286 (8%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ TYN ++ + ++ M +KG P+ SY ++ + + ++
Sbjct: 553 ITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEM 612
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRL---SEAYHLFQEMLSPPDDITFTTLMHACCLEG 156
E+ + P +L+ R+L A+H Q D + +++
Sbjct: 613 EIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQ 672
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ KA H +IH V+G P L TYN++I +G +A +L+ + G+
Sbjct: 673 KLEKA-HEMLDVIH-------VSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGI 724
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
SPD VSY VI GFC+ +++A + EM G+ T+ + +
Sbjct: 725 SPDVVSYNTVIKGFCKKGLVQEAIRILSEMTAN---GVQPCPI-----------TFNTFM 770
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+ Y G + + M G +P+ + ++I+G K + K+
Sbjct: 771 SCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKE 816
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 11/180 (6%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
+ G D + +++ F N+ KA+E + G+ P+ TY+SLI
Sbjct: 649 LQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGD 708
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+A + +++ + PD +++ T++ C +G +A + +M GV
Sbjct: 709 CWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGV--------Q 760
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P T+N + G EA ++R M E G P+ ++Y IVI G+ + ++ ++A +
Sbjct: 761 PCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDF 820
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 147/321 (45%), Gaps = 37/321 (11%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC--NNRCPGK 93
I+ + +++ +IK C ++RV+ + ++ M E G D +I+ C N+ +
Sbjct: 179 IRLEESSFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQNDLTSVE 238
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMH 150
A M + G P +++I+ L + + +A + ++ PD + +T ++
Sbjct: 239 ALVVWGNMRKLGFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLS 298
Query: 151 ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRG 210
EG++ K + +++ G++PD ++TYN I+GLC +EAL I+
Sbjct: 299 GIVKEGDYVKLDELFDEILVLGLVPD--------VYTYNVYINGLCKQNNFDEALKIVVS 350
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE- 269
M ++G P+ V+Y ++ C + +L KA + EM K V L+ TY ++ GL +
Sbjct: 351 MEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGV-ELNLHTYRIMLDGLVGKG 409
Query: 270 ---------------------DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDS-VID 307
T+ S+++ C +G + L L +++ K P + V +
Sbjct: 410 EIGEACVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKIVAKSFDPGAKVWE 469
Query: 308 SLLINGLDKKARTKDTKAHLL 328
+LL+N K ++ T A LL
Sbjct: 470 ALLLNSESKVTYSETTFAGLL 490
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 54/317 (17%)
Query: 112 TYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQM 168
++ LI+ALC +R+ A + M+ DD + ++ + C + + + +
Sbjct: 185 SFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQNDLTSV----EAL 240
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
+ G + GF P + +I L G+ +AL IL + E G+ PD V Y IV+S
Sbjct: 241 VVWGNMRKL--GFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLS 298
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDED---------------- 270
G + + K EL D +V GL D TY + GL ++
Sbjct: 299 GIVKEGDYVKLDEL---FDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLG 355
Query: 271 ------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
TY +L+ A C G+L K + EM KG + ++++GL K +
Sbjct: 356 CKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEA- 414
Query: 325 AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTML 384
++ + ++E C + +V +GL+++A + ++
Sbjct: 415 -----------------CVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKIV 457
Query: 385 EGNYKPDGAVYNLLIFD 401
++ P V+ L+ +
Sbjct: 458 AKSFDPGAKVWEALLLN 474
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
+I C + V++ V + + + K ++PD ++Y +I G C + ++ +M +G
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRG 60
Query: 106 ILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAF 162
D Y+SL+ AL ++ +A L +++ PD T+T L+ C G A
Sbjct: 61 QQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQ 120
Query: 163 HMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVS 222
++ ++ V G+ +N +I+GLC G +EAL +L M + G +PD V+
Sbjct: 121 EVYRDLM--------VKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVT 172
Query: 223 YIIVISGFCQNRELRKAYELKVEM 246
Y +I +N KA +L EM
Sbjct: 173 YKTLIRALFKNDMNDKAVKLLREM 196
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 81 VITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEML--- 137
+I G C N+ +A E+ K + PD YSSLI LC ++S+ + L +M
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRG 60
Query: 138 SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
D I +T+L+ A + KA + ++ +G+ PD +FTY ++ GLC
Sbjct: 61 QQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPD--------MFTYTMLVDGLCK 112
Query: 198 LGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEV 257
GR+++A + R + G +A + ++I+G C+ +A + EM+ D V
Sbjct: 113 NGRLKDAQEVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTP-DVV 171
Query: 258 TYAYLMQGLSDED 270
TY L++ L D
Sbjct: 172 TYKTLIRALFKND 184
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
+++ D+ Y+ +I C ++ ++ M ++G D + Y ++ N K
Sbjct: 24 KNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDK 83
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH--- 150
A ++ +GI PD FTY+ L+ LC RL +A ++++++ F MH
Sbjct: 84 AIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKG--YHFNACMHNVM 141
Query: 151 --ACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
C EG F +A + +M G PD V TY +I L ++A+ +L
Sbjct: 142 INGLCKEGLFDEALFVLSEMEDNGCTPDVV--------TYKTLIRALFKNDMNDKAVKLL 193
Query: 209 RGMPEMGL 216
R M GL
Sbjct: 194 REMLSRGL 201
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 37 QQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
Q D+ Y ++ +V+K + +L+ + ++G+ PD +Y ++ G C N A E
Sbjct: 62 QADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQE 121
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
++ KG +A ++ +I LC + EA + EM PD +T+ TL+ A
Sbjct: 122 VYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRALF 181
Query: 154 LEGEFSKAFHMHHQMIHKGVL 174
KA + +M+ +G+L
Sbjct: 182 KNDMNDKAVKLLREMLSRGLL 202
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 191 IIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEM-DRK 249
+I+GLC V+EA+ + + + ++PD V+Y +I G C++ ++ ++L +M DR
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDR- 59
Query: 250 VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
+D Y SL++A ++ K + L ++ +G PD ++
Sbjct: 60 --------------GQQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTM 105
Query: 310 LINGLDKKARTKDTK-AHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFS 368
L++GL K R KD + + L++ Y + + C +N + GL K
Sbjct: 106 LVDGLCKNGRLKDAQEVYRDLMVKGYHFNA-------------CMHNVM--INGLCKE-- 148
Query: 369 MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
GL +EA M + PD Y LI + KA + EM+ G +
Sbjct: 149 --GLFDEALFVLSEMEDNGCTPDVVTYKTLIRALFKNDMNDKAVKLLREMLSRGLL 202
>Medtr5g045490.1 | PPR containing plant-like protein | HC |
chr5:19957328-19961582 | 20130731
Length = 691
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 141/326 (43%), Gaps = 33/326 (10%)
Query: 5 RDSFTATLKTF--RHMVRNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGI 62
+++F A +K+F ++ ++ + + + I + YN ++ +C RVE+ G+
Sbjct: 319 KEAFGALIKSFCVEGLLSEALIIQ--SEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGL 376
Query: 63 LRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCS 122
M KG+ P A+++ ++ + P EM G+ P+A +Y+ LI A
Sbjct: 377 FVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGR 436
Query: 123 KRRLS----EAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFV 178
++++S +A+ +++ P ++T ++HA + G KA+ + MI +G+
Sbjct: 437 QKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGI----- 491
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
P++ TY ++ +G E + I + M + V++ I++ GF + +
Sbjct: 492 ---KPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFME 548
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHK 298
A ++ E + GL Y M LINAY G + L EM
Sbjct: 549 ARDVISEFGK---IGLQPTVMTYNM-----------LINAYARGGLDSNIPQLLKEMEAL 594
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTK 324
PDS+ S +I R +D K
Sbjct: 595 RLRPDSITYSTVIYAF---VRVRDFK 617
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 176/409 (43%), Gaps = 44/409 (10%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCN-NRCPGKAYE 96
+++ YN I R + + M G+ PD ++ +I G A++
Sbjct: 246 RNVRVYNAAISGLLYDGRYKDAWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQ 305
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
F +M+QKG+ + +LI++ C + LSEA + EM + I + TLM A C
Sbjct: 306 FFEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYC 365
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
+A + +M KG+ P VT F+ ++ Y+ + ++ E+L L M +
Sbjct: 366 KSNRVEEAEGLFVEMKAKGIKPTAVT-FNILMYAYSRRMQ-----PKIVESL--LAEMKD 417
Query: 214 MGLSPDAVSYIIVISGFCQNRELRK-AYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTY 272
GL P+A SY +IS + + +++ A + ++M +KV G+ ++ +Y
Sbjct: 418 FGLKPNANSYTCLISAYGRQKKMSDMAADAFLKM-KKV--GIKPTSH-----------SY 463
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
++I+AY G K + + M +G P + L++ + T+ L+++
Sbjct: 464 TAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMS 523
Query: 333 DYMYTSMPNY-IIYDTLIENCSNNEFKSVVG----------------LVKSFSMRGLVNE 375
+ + + + I+ D + E + V+ L+ +++ GL +
Sbjct: 524 EKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSN 583
Query: 376 AARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFV 424
+ M +PD Y+ +I+ R + +A+ + EMV+ G+V
Sbjct: 584 IPQLLKEMEALRLRPDSITYSTVIYAFVRVRDFKRAFFYHKEMVKSGYV 632
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ-NRELRKAYELKVEM 246
YNA I GL + GR ++A + M G+ PD V+ I+I G + + A++ +M
Sbjct: 251 YNAAISGLLYDGRYKDAWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKM 310
Query: 247 DRK-VVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSV 305
++K V WG ++ + +LI ++C +G L + L + EM KG +++
Sbjct: 311 NQKGVRWG---------------KEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAI 355
Query: 306 IDSLLINGLDKKARTKDTKAHLLLIIAD-------------YMYTSMPNYIIYDTLIENC 352
+ + L++ K R ++ + + + A Y Y+ I ++L+
Sbjct: 356 VYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEM 415
Query: 353 SNNEFK----SVVGLVKSFS-MRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLN 407
+ K S L+ ++ + + + AA A M + KP Y +I +
Sbjct: 416 KDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGW 475
Query: 408 VHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
KAY ++ M+R G + + LL A R G
Sbjct: 476 HEKAYAVFENMIREGIKPSIETYTTLLDAFRRVG 509
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
D TY+ +I+ HC +E+ +L + E G PD+ + +I C KA E
Sbjct: 145 DSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEVF 204
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLE 155
+++KG+ Y+ L++ L R+ EA + +M + D +++ +M+ C
Sbjct: 205 EFLERKGLKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKV 264
Query: 156 GEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMG 215
G +A + + + G+ PD V T+NA+I G GR E +G+L+ M E G
Sbjct: 265 GRSDEAMELFDEAVGVGLRPDVV--------TFNALIEGYSREGREMEGVGVLKMMKEHG 316
Query: 216 LSPDAVSYIIVISGFCQNRELRKAYELKVEMDR 248
D ++Y V+ G + E +A+ + EM R
Sbjct: 317 CVADLINYKTVLHGLLKWNETVEAFGVYKEMVR 349
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 127/326 (38%), Gaps = 47/326 (14%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
FT N + D AT +I C +V+K + + + KGL +Y ++ G
Sbjct: 170 FTVLENG--FEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLA 227
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
+A E ++M I D ++YS+++ LC R EA LF E + PD +
Sbjct: 228 YVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVV 287
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
TF L+ EG + + M G + D L Y ++HGL E
Sbjct: 288 TFNALIEGYSREGREMEGVGVLKMMKEHGCVAD--------LINYKTVLHGLLKWNETVE 339
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQ--------------------NREL---RKAY 240
A G+ + M +G D+ ++ C+ R L ++
Sbjct: 340 AFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFEKMKERGLVVDKRTV 399
Query: 241 ELKVE-------MDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
E+ VE D +V D V + Y ++G++ E+ +I C QG + + ++
Sbjct: 400 EVMVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEE----VIEGLCGQGRVDEAVSTLL 455
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKAR 319
+ G D V +L+N L+ R
Sbjct: 456 LLQANGGFLDRVSFGVLVNELNAHGR 481
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
SE Q ++ +N ++ + Q+ + + ++ L PD+ +Y +I C+
Sbjct: 104 SEFQIQTISDFNHLLMALVIAQKPDFCQTMFTKLSSFHLVPDSCTYSIMIRCHCSKNELE 163
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDI---TFTTLM 149
+A + + G PD+ T + LI +LC + ++ +A +F+ + + + L+
Sbjct: 164 EAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLL 223
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTG-FSPALFTYNAIIHGLCFLGRVEEALGIL 208
G +A +L D TG +++Y+A+++GLC +GR +EA+ +
Sbjct: 224 RGLAYVGRVDEAVE---------ILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELF 274
Query: 209 RGMPEMGLSPDAVSYIIVISGFC-QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL 266
+GL PD V++ +I G+ + RE+ LK+ + V D + Y ++ GL
Sbjct: 275 DEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHGCV--ADLINYKTVLHGL 331
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 49/309 (15%)
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P TY+ +I C +EEA +L + E G PD+ + ++I+ C+ +++KA E+
Sbjct: 144 PDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEV 203
Query: 243 KVEMDRKVVWGLDEVTYAY--LMQGLS----------------------DEDTYASLINA 278
++RK GL AY L++GL+ D +Y++++N
Sbjct: 204 FEFLERK---GLKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNG 260
Query: 279 YCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTS 338
C G + + L DE G PD V + LI G ++ R + L ++
Sbjct: 261 LCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHGCVAD 320
Query: 339 MPNY--IIYDTLIENCSNNEFKSVVGLVK--------------------SFSMRGLVNEA 376
+ NY +++ L N + F +V+ S+ +GL+ +A
Sbjct: 321 LINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDA 380
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA 436
+ M E D +++ R +A +MVR+G+ + ++
Sbjct: 381 CEVFEKMKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEG 440
Query: 437 LRDHGMYNE 445
L G +E
Sbjct: 441 LCGQGRVDE 449
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
MA +G++ D SY +I GFC + +A EM K I+PD TY+SLI +C +
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGK 60
Query: 126 LSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
+S A L EM PD IT+ ++++A C + KA + ++ +G+ P+
Sbjct: 61 ISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPN------ 114
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
++T+ +I G AL +L M + P+AV+Y I+I + KA L
Sbjct: 115 --IYTHTILIDG---------ALALLSKMKDNNCYPNAVTYRIIIRSLFDKNDNDKAERL 163
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G + + +YN +I+G C + +V+EA+ + M + PD V+Y +I G C++ ++ A
Sbjct: 5 GVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYA 64
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+L EM+ + L D TY S++NA C ++ K + L ++ +G
Sbjct: 65 LKLVDEMNDR--------------GQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQG 110
Query: 300 SLPDSVIDSLLING 313
P+ ++LI+G
Sbjct: 111 IRPNIYTHTILIDG 124
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 211 MPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDED 270
M G++ D SY I+I+GFC+ +++ +A L EM K + + D
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNI--------------IPDVV 46
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
TY SLI+ C G++ L L DEM+ +G LPD + + ++N L K
Sbjct: 47 TYNSLIDGICKSGKISYALKLVDEMNDRGQLPDIITYNSILNALCK 92
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGK 93
++I D+ TYN +I C ++ + ++ M ++G PD ++Y ++ C N K
Sbjct: 39 KNIIPDVVTYNSLIDGICKSGKISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDK 98
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQ---ALCSKRRLSEAYHLFQEMLSPPDDITFTTLMH 150
A ++ +GI P+ +T++ LI AL SK + + Y P+ +T+ ++
Sbjct: 99 AIALLTKLKDQGIRPNIYTHTILIDGALALLSKMKDNNCY---------PNAVTYRIIIR 149
Query: 151 ACCLEGEFSKA 161
+ + + KA
Sbjct: 150 SLFDKNDNDKA 160
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 182/461 (39%), Gaps = 73/461 (15%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I +TYN +I ++ + + + M + G+ PD +++ ++T F + KA
Sbjct: 215 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKA 274
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM 149
+ + I PD T++ +I L ++ +A +F M PD +TFT+++
Sbjct: 275 LSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMI 334
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFS 182
H + G + M+ +G+ P+ V+ GF
Sbjct: 335 HLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR 394
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + +Y ++++ + ++A I + + L P+ VSY +I + N L A E+
Sbjct: 395 PDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI 454
Query: 243 KVEMDRKVVW--------------------GLDEVTYAYLMQGLS-DEDTYASLINAYCA 281
EM++ + +D V A M+G+ + Y S I +Y
Sbjct: 455 LREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYIN 514
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP- 340
GE K + L + M K DSV ++LI+G K ++ + L + + M+ +P
Sbjct: 515 VGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA----LSFMEEMMHLKLPM 570
Query: 341 NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIF 400
+ +Y ++I C+ +S +G + EA + M PD Y ++
Sbjct: 571 SKEVYSSII--CA-------------YSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLD 615
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+ K Y ++ EM + AL+ A G
Sbjct: 616 AYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGG 656
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 25/286 (8%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
+E ++ ++ +YN ++ + + + + + + G PD +SY ++ + +R P
Sbjct: 355 AEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 414
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
KA E + + + P+ +Y++LI A S L +A + +EM P+ ++ TL+
Sbjct: 415 KAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLL 474
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
AC G+ K + +G+ + V YN+ I +G ++A+ +
Sbjct: 475 AACGRCGQKVKIDTVLSAAEMRGIKLNTV--------AYNSAIGSYINVGEYDKAIDLYN 526
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M + + D+V+Y ++ISG C+ + +A EM +L +S E
Sbjct: 527 SMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEM-------------MHLKLPMSKE 573
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLD 315
Y+S+I AY QG++ + + + M G PD V + +++ +
Sbjct: 574 -VYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYN 618
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 150/354 (42%), Gaps = 51/354 (14%)
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACC 153
F +QK Y+ +I+ R +A LF EM PD T+ L++A
Sbjct: 137 FSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHG 196
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
G++ A ++ M+ + +P P+ TYN +I+ G +EAL + + M +
Sbjct: 197 RAGQWRWAMNIMDDML-RAAIP-------PSRSTYNNLINACGSSGNWKEALNVCKKMTD 248
Query: 214 MGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDED 270
G+ PD V++ I+++ F + KA ++Y L++G D
Sbjct: 249 NGVGPDLVTHNIMLTAFKSGTQYSKA-----------------LSYFELIKGTHIRPDTT 291
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSL--PDSVIDSLLINGLDKKARTKDTKAHLL 328
T+ +I+ + K + + + M K S PD V + +I+ ++ +A
Sbjct: 292 THNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFN 351
Query: 329 LIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNY 388
+++A+ + PN + Y+ L+ +++ RG+ NEA + + + + +
Sbjct: 352 MMLAEGL---KPNIVSYNALL---------------GAYAARGMENEALQVFNEIKQNGF 393
Query: 389 KPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
+PD Y L+ + R KA ++ + R ++ S AL+ A +G+
Sbjct: 394 RPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGL 447
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 54/346 (15%)
Query: 27 FTAARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC 86
F+ +N ++ YN +I+ H R ++ G+ M + PDA +Y +I
Sbjct: 137 FSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAH- 195
Query: 87 NNRCPGKAYEFKLEMD------QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP- 139
G+A +++ M+ + I P TY++LI A S EA ++ ++M
Sbjct: 196 -----GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 250
Query: 140 --PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
PD +T ++ A ++SKA + ++I KG T P T+N IIH L
Sbjct: 251 VGPDLVTHNIMLTAFKSGTQYSKALS-YFELI-KG------THIRPDTTTHNIIIHCLVK 302
Query: 198 LGRVEEALGILRGMPEMGLS--PDAVSYIIVI-----SGFCQNRELRKAYELKVEMDRKV 250
L + ++A+ I M E PD V++ +I G +N E A+ +
Sbjct: 303 LKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCE--AAFNM-------- 352
Query: 251 VWGLDEVTYAYLMQGLSDE-DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSL 309
L +GL +Y +L+ AY A+G + L + +E+ G PD V +
Sbjct: 353 ----------MLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTS 402
Query: 310 LINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNN 355
L+N + + + + +I + + PN + Y+ LI+ +N
Sbjct: 403 LLNAYGRSRKPQKAREIFKMIKRNNL---KPNIVSYNALIDAYGSN 445
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT--GFCNNRCPG 92
+++ ++ +YN +I + +E + ILR M + + P+ +S ++ G C +
Sbjct: 427 NLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKI 486
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
EM +GI + Y+S I + + +A L+ M D +T+T L+
Sbjct: 487 DTVLSAAEM--RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLI 544
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
CC +F +A +M+H LP + Y++II G++ EA
Sbjct: 545 SGCCKMSKFGEALSFMEEMMHLK-LP-------MSKEVYSSIICAYSKQGQIIEAESTFN 596
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M +G SPD V+Y ++ + + K Y L EM+ V LD + A LM+
Sbjct: 597 LMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDV-KLDTIACAALMR----- 650
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
A+ G+ +VL+L M K +P S D++ + D K + +
Sbjct: 651 --------AFNKGGQPGRVLSLAQSMREK-DIPLS--DTIFFEMVSACGLLHDWKTAVDM 699
Query: 330 IIADYMYTSMP 340
I YM S+P
Sbjct: 700 I--KYMEPSLP 708
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 40 LATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL 99
+ YN ++ ++++ + M + + P ++Y ++ G+C R KA E
Sbjct: 254 IRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVG 313
Query: 100 EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHL---FQEMLSPPDDITFTTLMHACCLEG 156
EM ++GI P+A Y+ +I AL R EA + F + P T+ +L+ C G
Sbjct: 314 EMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAG 373
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+ A + +MI + GF P TYN G+V+E + + M E G
Sbjct: 374 DIEGASKILKKMISR--------GFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGH 425
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
+PD ++Y +V+ C+ +L A ++ +EM K
Sbjct: 426 NPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHK 458
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 158/407 (38%), Gaps = 70/407 (17%)
Query: 56 VEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKL-EMDQKGILPDAFTYS 114
+ G +L + + G+ P V F ++ P + L ++Q G PD+ +
Sbjct: 85 ISPGSSLLTNLTQTGIKPTPPLLHAVFDHFASS--PKLLHSLYLWALNQPGFKPDSSLFD 142
Query: 115 SLIQALCSKRRLSEAYHLF-----------QEMLSPPDDITFTTLMHACCLEGEFSKAFH 163
S+I AL + +A+ L ++++S TF ++ G A
Sbjct: 143 SVINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVS---VGTFAIIIRRYARAGMHKAAIR 199
Query: 164 MHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL--RGMPEMGLSPDAV 221
K + D V+ S + +I LC G EA L R ++G P
Sbjct: 200 TFEFAKDKKSIVDSVSEMS----LFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIR 255
Query: 222 SYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCA 281
Y I+++G+ + R+L+ A L EM + V TY +L+ YC
Sbjct: 256 VYNIMLNGWFRARKLKHAERLWEEMKNENV--------------RPSVVTYGTLVEGYCR 301
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDT-----KAHLLLIIADYMY 336
+ K L + EM+ +G P++++ + +I+ L + R K+ + H+L I
Sbjct: 302 MRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQI------ 355
Query: 337 TSMPNYIIYDTLIEN-CSNNEFKSVVGLVKS-------------------FSMRGLVNEA 376
P Y++L++ C + + ++K FS G V+E
Sbjct: 356 --GPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEG 413
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF 423
+ M+E + PD Y+L++ C + A + MEM G+
Sbjct: 414 MNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGY 460
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 32/290 (11%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSK 123
R + G P Y ++ G+ R A EM + + P TY +L++ C
Sbjct: 243 RKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRM 302
Query: 124 RRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTG 180
RR+ +A + EM P+ I + ++ A G F +A M + V
Sbjct: 303 RRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERF--------HVLQ 354
Query: 181 FSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAY 240
P L TYN+++ G C G +E A IL+ M G P +Y F + ++ +
Sbjct: 355 IGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGM 414
Query: 241 ELKVEMDRKVVWGLDEVTYAYLMQGLSDED--TYASLINAYCAQGELFKVLTLDDEMSHK 298
L Y +++ + D TY ++ C + +L + + EM HK
Sbjct: 415 NL----------------YTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHK 458
Query: 299 GSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTL 348
G D ++L + L K + ++ A +I + +P Y+ + L
Sbjct: 459 GYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGI---IPQYLTFQKL 505
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 41 ATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLE 100
TYN + +V++G+ + M E G +PD L+Y V+ C A + +E
Sbjct: 395 TTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSME 454
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
M KG D T + L LC +L EA+ F++M+ P +TF L
Sbjct: 455 MRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKL 505
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 182/461 (39%), Gaps = 73/461 (15%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I +TYN +I ++ + + + M + G+ PD +++ ++T F + KA
Sbjct: 76 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKA 135
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM 149
+ + I PD T++ +I L ++ +A +F M PD +TFT+++
Sbjct: 136 LSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMI 195
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFS 182
H + G + M+ +G+ P+ V+ GF
Sbjct: 196 HLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR 255
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + +Y ++++ + ++A I + + L P+ VSY +I + N L A E+
Sbjct: 256 PDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI 315
Query: 243 KVEMDRKVVW--------------------GLDEVTYAYLMQGLS-DEDTYASLINAYCA 281
EM++ + +D V A M+G+ + Y S I +Y
Sbjct: 316 LREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYIN 375
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP- 340
GE K + L + M K DSV ++LI+G K ++ + L + + M+ +P
Sbjct: 376 VGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA----LSFMEEMMHLKLPM 431
Query: 341 NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIF 400
+ +Y ++I C+ +S +G + EA + M PD Y ++
Sbjct: 432 SKEVYSSII--CA-------------YSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLD 476
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+ K Y ++ EM + AL+ A G
Sbjct: 477 AYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGG 517
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 32/312 (10%)
Query: 14 TFRHMVRNGVVC----RFTAARN---SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
TF M+ VC AA N +E ++ ++ +YN ++ + + + + +
Sbjct: 190 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 249
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ G PD +SY ++ + +R P KA E + + + P+ +Y++LI A S L
Sbjct: 250 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLL 309
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A + +EM P+ ++ TL+ AC G+ K + +G+ + V
Sbjct: 310 EDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTV----- 364
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
YN+ I +G ++A+ + M + + D+V+Y ++ISG C+ + +A
Sbjct: 365 ---AYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFM 421
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
EM +L +S E Y+S+I AY QG++ + + + M G PD
Sbjct: 422 EEM-------------MHLKLPMSKE-VYSSIICAYSKQGQIIEAESTFNLMKSLGCSPD 467
Query: 304 SVIDSLLINGLD 315
V + +++ +
Sbjct: 468 VVTYTAMLDAYN 479
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 149/349 (42%), Gaps = 51/349 (14%)
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEF 158
+QK Y+ +I+ R +A LF EM PD T+ L++A G++
Sbjct: 3 NQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQW 62
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSP 218
A ++ M+ + +P P+ TYN +I+ G +EAL + + M + G+ P
Sbjct: 63 RWAMNIMDDML-RAAIP-------PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP 114
Query: 219 DAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGL---SDEDTYASL 275
D V++ I+++ F + KA ++Y L++G D T+ +
Sbjct: 115 DLVTHNIMLTAFKSGTQYSKA-----------------LSYFELIKGTHIRPDTTTHNII 157
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSL--PDSVIDSLLINGLDKKARTKDTKAHLLLIIAD 333
I+ + K + + + M K S PD V + +I+ ++ +A +++A+
Sbjct: 158 IHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAE 217
Query: 334 YMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGA 393
+ PN + Y+ L+ +++ RG+ NEA + + + + ++PD
Sbjct: 218 GL---KPNIVSYNALL---------------GAYAARGMENEALQVFNEIKQNGFRPDVV 259
Query: 394 VYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
Y L+ + R KA ++ + R ++ S AL+ A +G+
Sbjct: 260 SYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGL 308
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 50/328 (15%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
YN +I+ H R ++ G+ M + PDA +Y +I G+A +++ M+
Sbjct: 14 YNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAH------GRAGQWRWAMN 67
Query: 103 ------QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
+ I P TY++LI A S EA ++ ++M PD +T ++ A
Sbjct: 68 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFK 127
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPE 213
++SKA + ++I KG T P T+N IIH L L + ++A+ I M E
Sbjct: 128 SGTQYSKALS-YFELI-KG------THIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKE 179
Query: 214 MG--LSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAY---LMQGLSD 268
PD V++ +I + V ++ A+ L +GL
Sbjct: 180 KKSECHPDVVTFTSMIHLY------------------SVCGHIENCEAAFNMMLAEGLKP 221
Query: 269 E-DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHL 327
+Y +L+ AY A+G + L + +E+ G PD V + L+N + + + +
Sbjct: 222 NIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF 281
Query: 328 LLIIADYMYTSMPNYIIYDTLIENCSNN 355
+I + + PN + Y+ LI+ +N
Sbjct: 282 KMIKRNNL---KPNIVSYNALIDAYGSN 306
>Medtr7g027940.1 | PPR containing plant-like protein | HC |
chr7:9372541-9375750 | 20130731
Length = 730
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGE 157
+D + D Y+ ++ LC R+ E Y + QEM PD ++ +M ACC E
Sbjct: 462 LDCRNYFKDVEGYNVMVSWLCEAGRVKEGYAVLQEMKKKGLNPDVSSYNYVMEACCKEDL 521
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
A + +M F +G L TYN +IH G +EEA + M + G+
Sbjct: 522 LRPARKLWDEM--------FASGCCGNLKTYNVLIHKFLEEGLIEEARTLFNRMVDKGVE 573
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLIN 277
PD+ SY ++ GFC+ +L +A+EL R+ ++T A D S I
Sbjct: 574 PDSASYTFLLQGFCREDKLEEAFELYSRSVRQ------DITIA--------RDILGSFIL 619
Query: 278 AYCAQGELFKVLTLDDEMSHKGSLPDS 304
+ C +G + L +SH P+S
Sbjct: 620 SLCKKGHMTAASKLLCSLSHDIGRPES 646
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 38 QDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEF 97
+D+ YN ++ C RV++G +L+ M +KGL+PD SY YV+ C A +
Sbjct: 469 KDVEGYNVMVSWLCEAGRVKEGYAVLQEMKKKGLNPDVSSYNYVMEACCKEDLLRPARKL 528
Query: 98 KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCL 154
EM G + TY+ LI + + EA LF M+ PD ++T L+ C
Sbjct: 529 WDEMFASGCCGNLKTYNVLIHKFLEEGLIEEARTLFNRMVDKGVEPDSASYTFLLQGFCR 588
Query: 155 EGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
E + +AF ++ + + + + + A + I LC G + A +L +
Sbjct: 589 EDKLEEAFELYSRSVRQDI--------TIARDILGSFILSLCKKGHMTAASKLLCSLSHD 640
Query: 215 GLSPDAVSYIIVISGFCQNRELRKAYE 241
P+ S++ ++ RE++ A E
Sbjct: 641 IGRPE--SHVALLKCLADAREIQTAIE 665
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 134/307 (43%), Gaps = 43/307 (14%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK-LEMDQK 104
I+ C + +V++ + +L + E+G PD ++Y V F + E K L+M +K
Sbjct: 303 IVHGLCEVGKVDEAMVMLGELRERGWKPDFMAYWVVANEF--RKMGNVVVEIKVLKMKRK 360
Query: 105 -GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP---DDITFTTLMHACCLEGEFSK 160
G+ P + Y I L S++R+ EA + ++ +D F L+ + + +
Sbjct: 361 LGVAPRSGDYKGFIFELVSEKRILEAKMTGEVIVGGNFVVEDDVFNVLIESVS-DIDPVG 419
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
A + ++ K F++ S + N LC +G+V+E L + R + D
Sbjct: 420 AIVFFNYVVEK---ERFLSVSSLNSLSRN-----LCRVGKVDELLEVFRVLDCRNYFKDV 471
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDED-------- 270
Y +++S C+ +++ Y + EM +K GL D +Y Y+M+ ED
Sbjct: 472 EGYNVMVSWLCEAGRVKEGYAVLQEMKKK---GLNPDVSSYNYVMEACCKEDLLRPARKL 528
Query: 271 --------------TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
TY LI+ + +G + + TL + M KG PDS + L+ G +
Sbjct: 529 WDEMFASGCCGNLKTYNVLIHKFLEEGLIEEARTLFNRMVDKGVEPDSASYTFLLQGFCR 588
Query: 317 KARTKDT 323
+ + ++
Sbjct: 589 EDKLEEA 595
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 51 CLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDA 110
C + +V++ + + R + + D Y +++ C + Y EM +KG+ PD
Sbjct: 447 CRVGKVDELLEVFRVLDCRNYFKDVEGYNVMVSWLCEAGRVKEGYAVLQEMKKKGLNPDV 506
Query: 111 FTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQ 167
+Y+ +++A C + L A L+ EM + + T+ L+H EG +A + ++
Sbjct: 507 SSYNYVMEACCKEDLLRPARKLWDEMFASGCCGNLKTYNVLIHKFLEEGLIEEARTLFNR 566
Query: 168 MIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
M+ KGV PD +Y ++ G C ++EEA
Sbjct: 567 MVDKGVEPDSA--------SYTFLLQGFCREDKLEEAF 596
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 182/461 (39%), Gaps = 73/461 (15%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
+I +TYN +I ++ + + + M + G+ PD +++ ++T F + KA
Sbjct: 11 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKA 70
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP-----PDDITFTTLM 149
+ + I PD T++ +I L ++ +A +F M PD +TFT+++
Sbjct: 71 LSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMI 130
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVT---------------------------GFS 182
H + G + M+ +G+ P+ V+ GF
Sbjct: 131 HLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR 190
Query: 183 PALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYEL 242
P + +Y ++++ + ++A I + + L P+ VSY +I + N L A E+
Sbjct: 191 PDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI 250
Query: 243 KVEMDRKVVW--------------------GLDEVTYAYLMQGLS-DEDTYASLINAYCA 281
EM++ + +D V A M+G+ + Y S I +Y
Sbjct: 251 LREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYIN 310
Query: 282 QGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP- 340
GE K + L + M K DSV ++LI+G K ++ + L + + M+ +P
Sbjct: 311 VGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA----LSFMEEMMHLKLPM 366
Query: 341 NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIF 400
+ +Y ++I C+ +S +G + EA + M PD Y ++
Sbjct: 367 SKEVYSSII--CA-------------YSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLD 411
Query: 401 DHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+ K Y ++ EM + AL+ A G
Sbjct: 412 AYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGG 452
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 32/312 (10%)
Query: 14 TFRHMVRNGVVC----RFTAARN---SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
TF M+ VC AA N +E ++ ++ +YN ++ + + + + +
Sbjct: 125 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 184
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ G PD +SY ++ + +R P KA E + + + P+ +Y++LI A S L
Sbjct: 185 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLL 244
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A + +EM P+ ++ TL+ AC G+ K + +G+ + V
Sbjct: 245 EDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTV----- 299
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
YN+ I +G ++A+ + M + + D+V+Y ++ISG C+ + +A
Sbjct: 300 ---AYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFM 356
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
EM +L +S E Y+S+I AY QG++ + + + M G PD
Sbjct: 357 EEM-------------MHLKLPMSKE-VYSSIICAYSKQGQIIEAESTFNLMKSLGCSPD 402
Query: 304 SVIDSLLINGLD 315
V + +++ +
Sbjct: 403 VVTYTAMLDAYN 414
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT--GFCNNRCPG 92
+++ ++ +YN +I + +E + ILR M + + P+ +S ++ G C +
Sbjct: 223 NLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKI 282
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
EM +GI + Y+S I + + +A L+ M D +T+T L+
Sbjct: 283 DTVLSAAEM--RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLI 340
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
CC +F +A +M+H LP + Y++II G++ EA
Sbjct: 341 SGCCKMSKFGEALSFMEEMMHLK-LP-------MSKEVYSSIICAYSKQGQIIEAESTFN 392
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M +G SPD V+Y ++ + + K Y L EM+ V LD + A LM+
Sbjct: 393 LMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDV-KLDTIACAALMR----- 446
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
A+ G+ +VL+L M K +P S D++ + D K + +
Sbjct: 447 --------AFNKGGQPGRVLSLAQSMREK-DIPLS--DTIFFEMVSACGLLHDWKTAVDM 495
Query: 330 IIADYMYTSMP 340
I YM S+P
Sbjct: 496 I--KYMEPSLP 504
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 179 TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRK 238
P+ TYN +I+ G +EAL + + M + G+ PD V++ I+++ F + K
Sbjct: 10 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSK 69
Query: 239 AYELKVEMDRKVVWGLDEVTYAYLMQGL---SDEDTYASLINAYCAQGELFKVLTLDDEM 295
A ++Y L++G D T+ +I+ + K + + + M
Sbjct: 70 A-----------------LSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSM 112
Query: 296 SHKGSL--PDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCS 353
K S PD V + +I+ ++ +A +++A+ + PN + Y+ L+
Sbjct: 113 KEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGL---KPNIVSYNALL---- 165
Query: 354 NNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYN 413
+++ RG+ NEA + + + + ++PD Y L+ + R KA
Sbjct: 166 -----------GAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKARE 214
Query: 414 MYMEMVRYGFVSHMFSVLALLTALRDHGM 442
++ + R ++ S AL+ A +G+
Sbjct: 215 IFKMIKRNNLKPNIVSYNALIDAYGSNGL 243
>Medtr8g058400.1 | PPR containing plant-like protein | HC |
chr8:20112988-20113965 | 20130731
Length = 261
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 80 YVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM--L 137
+VI+ + R P +A + L + P +++SL+ AL + RR H +
Sbjct: 81 HVISFYARARLPSRAVQTFLSIPSFRCTPTLKSFNSLLNALLTCRRFQTITHFASRLSEF 140
Query: 138 SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCF 197
PP+ T+ L+ +C +G +A + +M V PD V T+ +IHGLC
Sbjct: 141 GPPNTCTYNILIRSCFFQGRTDRALELFDEMRRTNVCPDQV--------TFGTLIHGLCK 192
Query: 198 LGRVEEALGILRGM-PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDE 256
R+ +A G+ + M E L P Y ++ G C+ EL +A+E+K EM+R + LD
Sbjct: 193 DSRMHQAFGMKKLMIQEFKLKPCVSVYTNLMKGVCEIGELHRAFEIKDEMERNGLR-LDV 251
Query: 257 VTYAYLM 263
V Y L+
Sbjct: 252 VVYNTLL 258
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 150/366 (40%), Gaps = 51/366 (13%)
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFC-NNRCPGKAYEFKLEMDQKGILPDAFTYSSLI 117
+G+ +G S+ +I+ F N R P F+ M G++P+ TY+S+I
Sbjct: 232 ALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFR-SMSSWGVVPNVITYNSII 290
Query: 118 QALCSKR-RLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGV 173
A + EM++ PD +T+ +L+ C +G + A + +M H+ +
Sbjct: 291 DAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCI 350
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+PD +FTYN + LC G+++ A + M + P+ V+Y ++ G+ +
Sbjct: 351 VPD--------VFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKA 402
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
L A L EM + V LD V +Y +L+ Y G L + +
Sbjct: 403 NLLEDALNLYEEMKLRSV-CLDRV-------------SYNTLVGIYEKLGNLDEAIEKCK 448
Query: 294 EMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCS 353
EM G D V + L++G K + + + A +Y PN + Y T+I+ +
Sbjct: 449 EMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIY---PNTLTYSTMIDMYT 505
Query: 354 NNE-FKSVVGLVKSFSM-------------------RGLVNEAARAHDTMLEGNYKPDGA 393
E F+ + + + F M GL+ + M+E KP+
Sbjct: 506 KGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVV 565
Query: 394 VYNLLI 399
+N +I
Sbjct: 566 TFNSII 571
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 170/362 (46%), Gaps = 48/362 (13%)
Query: 6 DSFTATLKTFRHMV----RNGVVCRFTAA------RNSESIQQDLATYNKIIKQHCLMQ- 54
+ + +T+ +F M+ RNG RF A +S + ++ TYN II +
Sbjct: 242 EGYGSTVHSFSAMISAFGRNG---RFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEV 298
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
+ V M GL PD L+Y +++ + A + EMD + I+PD FTY+
Sbjct: 299 SFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYN 358
Query: 115 SLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
+ + LC ++ A +F+EM S P+ +T++ +M A +++ +M +
Sbjct: 359 TYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLR 418
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
V D V +YN ++ LG ++EA+ + M G++ D V+Y ++SG+
Sbjct: 419 SVCLDRV--------SYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYG 470
Query: 232 QN---RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
++ E+R+ +E EM + ++ + +TY+ ++ + + + ++ Y FK+
Sbjct: 471 KHGMYDEVRRLFE---EMKARNIYP-NTLTYSTMIDMYTKGEMFQEAMDVY----REFKM 522
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTL 348
L+ ++ ++ID+L NGL ++ ++L++A PN + ++++
Sbjct: 523 ARLEIDV----VFYSAIIDTLCKNGL--------MESSIMLLMAMMEKGIKPNVVTFNSI 570
Query: 349 IE 350
I+
Sbjct: 571 ID 572
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
+S+ + ++ TY+ ++ + +E + + M + + D +SY ++ +
Sbjct: 381 SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNL 440
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
+A E EM++ GI D TY++L+ E LF+EM + P+ +T++T+
Sbjct: 441 DEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTM 500
Query: 149 MHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGIL 208
+ F +A ++ + + D V Y+AII LC G +E ++ +L
Sbjct: 501 IDMYTKGEMFQEAMDVYREFKMARLEIDVVF--------YSAIIDTLCKNGLMESSIMLL 552
Query: 209 RGMPEMGLSPDAVSYIIVISGFCQNREL 236
M E G+ P+ V++ +I Q+ L
Sbjct: 553 MAMMEKGIKPNVVTFNSIIDASQQSPTL 580
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 31/266 (11%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G+ + +++A+I GR +A+ + R M G+ P+ ++Y +I +
Sbjct: 243 GYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKG------ 296
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKG 299
+V D VV DE+ LM D TY SL++ ++G L EM H+
Sbjct: 297 ---EVSFD-VVVKFYDEMIANGLM---PDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRC 349
Query: 300 SLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKS 359
+PD + ++ L K + + + + ++ PN + Y +++
Sbjct: 350 IVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVW---PNVVTYSAMMD--------- 397
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMV 419
++ L+ +A ++ M + D YN L+ + + N+ +A EM
Sbjct: 398 ------GYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEME 451
Query: 420 RYGFVSHMFSVLALLTALRDHGMYNE 445
R G + + ALL+ HGMY+E
Sbjct: 452 RSGINRDVVTYNALLSGYGKHGMYDE 477
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 34/254 (13%)
Query: 4 LRDSFTATLKTFRHMVRNGVVCR----FTAARNSESIQQDLATYNKIIKQHCLMQRVEKG 59
L+ +F L+TF ++ F ++ D+ TYN ++ +C + +EK
Sbjct: 191 LKHNFRPNLQTFNILLSGWKNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKA 250
Query: 60 VGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQA 119
+ M EK LSPD ++Y VI G P KA + EM + G+ PD Y++ I+
Sbjct: 251 YKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRN 310
Query: 120 LCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLP- 175
C +RL A+ L EM++ P+ T+ + +++++ +M+ +G LP
Sbjct: 311 YCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPY 370
Query: 176 -------------------------DFV-TGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
+ V GF + + LC +G++ EA
Sbjct: 371 TQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFL 430
Query: 210 GMPEMGLSPDAVSY 223
M E G P VS+
Sbjct: 431 EMIEKGQRPSNVSF 444
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 102 DQKGILP-DAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSK 160
DQ I P + +CS R+ E + F++++ F L+ C E +
Sbjct: 124 DQNVITPRTVMVVLGRVAKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTD 183
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
A +++H + H F P L T+N ++ G VE+A + M EMG+ PD
Sbjct: 184 ARNVYHSLKH---------NFRPNLQTFNILLSG---WKNVEDAELFVNEMKEMGVEPDV 231
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS------------- 267
V+Y ++ +C+ RE+ KAY++ EM K + D +TY ++ GL
Sbjct: 232 VTYNSLVDVYCKGREIEKAYKVFDEMREKDL-SPDVITYTSVIGGLGLVGQPDKARDVLK 290
Query: 268 ---------DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D Y + I YC L L DEM +KG P++ +L
Sbjct: 291 EMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFF 343
>Medtr1g100593.1 | PPR containing plant-like protein | HC |
chr1:45524249-45521592 | 20130731
Length = 501
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI---------TGFCNNR 89
D+ TYN +I + +V++ + +L M G SPD +Y ++ G +
Sbjct: 266 DILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGDLDKE 325
Query: 90 CPGKAYE-FKL-----EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---P 140
GK E FK M + GI P +++LI +L + F EM P
Sbjct: 326 DLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMP 385
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D + +T ++ + E KA M +M+ K ++P+ +FTYN++I GLC G+
Sbjct: 386 DVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPN--------VFTYNSMIRGLCMAGK 437
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVIS 228
+EA + + M G SP++V YI ++S
Sbjct: 438 FDEACSMFKEMERKGCSPNSVVYITLVS 465
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 49/332 (14%)
Query: 2 KLLRDSFTATLKTFRHMVR--------NGVVCRFTAARNSESIQQDLATYNKIIKQHCLM 53
+++ + AT +TF ++R +V RF ++ S + + +YN I+ ++
Sbjct: 186 EMIGKGYKATARTFNILIRTCGEAGLAKTLVERFIKSK-SFNYRPFKHSYNAILHSFLVL 244
Query: 54 QRVEKGVGILRGMA-EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
+ + + M + G S D L+Y VI + EMD+ G PD T
Sbjct: 245 NQYKLIEWVYEQMLLDGGFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHT 304
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
Y+ L+ A+ SK + + L +E L E E KA + + M
Sbjct: 305 YNILLHAI-SKGDIGKG-DLDKEDLGK---------------EKEQFKALKLLNYMRE-- 345
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
TG P + + +I G G+++ M + G PD V+Y ++I+G+
Sbjct: 346 ------TGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITGYVV 399
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
REL KA E+ EM K + + + TY S+I C G+ + ++
Sbjct: 400 ARELEKAQEMFEEMLSKEL--------------VPNVFTYNSMIRGLCMAGKFDEACSMF 445
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
EM KG P+SV+ L++ L R D +
Sbjct: 446 KEMERKGCSPNSVVYITLVSCLRNAGRVADAR 477
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + G PD ++Y +ITG+ R KA E EM K ++P+ FTY+S+I+ LC +
Sbjct: 378 MKKNGCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGK 437
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
EA +F+EM P+ + + TL+ G + A + QM G ++ F
Sbjct: 438 FDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTETGKYAHLLSRFK 497
>Medtr1g100593.2 | PPR containing plant-like protein | HC |
chr1:45524249-45520736 | 20130731
Length = 501
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVI---------TGFCNNR 89
D+ TYN +I + +V++ + +L M G SPD +Y ++ G +
Sbjct: 266 DILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGDLDKE 325
Query: 90 CPGKAYE-FKL-----EMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---P 140
GK E FK M + GI P +++LI +L + F EM P
Sbjct: 326 DLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMP 385
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGR 200
D + +T ++ + E KA M +M+ K ++P+ +FTYN++I GLC G+
Sbjct: 386 DVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPN--------VFTYNSMIRGLCMAGK 437
Query: 201 VEEALGILRGMPEMGLSPDAVSYIIVIS 228
+EA + + M G SP++V YI ++S
Sbjct: 438 FDEACSMFKEMERKGCSPNSVVYITLVS 465
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 49/332 (14%)
Query: 2 KLLRDSFTATLKTFRHMVR--------NGVVCRFTAARNSESIQQDLATYNKIIKQHCLM 53
+++ + AT +TF ++R +V RF ++ S + + +YN I+ ++
Sbjct: 186 EMIGKGYKATARTFNILIRTCGEAGLAKTLVERFIKSK-SFNYRPFKHSYNAILHSFLVL 244
Query: 54 QRVEKGVGILRGMA-EKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFT 112
+ + + M + G S D L+Y VI + EMD+ G PD T
Sbjct: 245 NQYKLIEWVYEQMLLDGGFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHT 304
Query: 113 YSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
Y+ L+ A+ SK + + L +E L E E KA + + M
Sbjct: 305 YNILLHAI-SKGDIGKG-DLDKEDLGK---------------EKEQFKALKLLNYMRE-- 345
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
TG P + + +I G G+++ M + G PD V+Y ++I+G+
Sbjct: 346 ------TGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITGYVV 399
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
REL KA E+ EM K + + + TY S+I C G+ + ++
Sbjct: 400 ARELEKAQEMFEEMLSKEL--------------VPNVFTYNSMIRGLCMAGKFDEACSMF 445
Query: 293 DEMSHKGSLPDSVIDSLLINGLDKKARTKDTK 324
EM KG P+SV+ L++ L R D +
Sbjct: 446 KEMERKGCSPNSVVYITLVSCLRNAGRVADAR 477
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M + G PD ++Y +ITG+ R KA E EM K ++P+ FTY+S+I+ LC +
Sbjct: 378 MKKNGCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGK 437
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFS 182
EA +F+EM P+ + + TL+ G + A + QM G ++ F
Sbjct: 438 FDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTETGKYAHLLSRFK 497
>Medtr3g091460.1 | PPR containing plant-like protein | HC |
chr3:41616039-41619290 | 20130731
Length = 631
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 22/295 (7%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
T+ +IK R+++ + I M G +PD L Y Y++ G + E+
Sbjct: 208 TFRILIKGLVDNNRLDRAMDIKDQMNASGFAPDPLVYHYLMLGHARSSDGDGVLRVYEEL 267
Query: 102 DQK--GILPDAFTYSSLIQALCSKRRLSEAYHLFQEML---SPPDDITFTTLMHACCLEG 156
+K G++ D L++ K EA +QE+ DI + +++ A G
Sbjct: 268 KEKLGGVVEDGVVLGCLMKGYFLKGMEKEAMECYQEVFVEGKKMSDIAYNSVLDALAKNG 327
Query: 157 EFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGL 216
+F +A + +MI + P + L ++N ++ G C G+ +EA+ + R M E
Sbjct: 328 KFDEAMRLFDRMIKEHNPP---AKLAVNLGSFNVMVDGYCAEGKFKEAIEVFRSMGESRC 384
Query: 217 SPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLI 276
PD +S+ +I C N + +A E+ EM+ K V DE TY LM E
Sbjct: 385 KPDTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGV-NPDEYTYGLLMDTCFKE------- 436
Query: 277 NAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLII 331
N FK +M G P+ + + L++GL K + D K L++
Sbjct: 437 NRPDDAASYFK------KMVESGLRPNLAVYNRLVDGLVKVGKIDDAKFFFDLMV 485
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
+L ++N ++ +C + ++ + + R M E PD LS+ +I CNN +A E
Sbjct: 352 NLGSFNVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVY 411
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPDDITFTTLMHACCLEGEF 158
EM+ KG+ PD +TY L+ + R +A F++M+
Sbjct: 412 GEMEGKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVE-------------------- 451
Query: 159 SKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEA 204
+G P L YN ++ GL +G++++A
Sbjct: 452 --------------------SGLRPNLAVYNRLVDGLVKVGKIDDA 477
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 137/353 (38%), Gaps = 63/353 (17%)
Query: 64 RGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE-FKLEMDQKGILPDAFTYSSLIQALCS 122
R + + G+ P+ ++Y + + + R P A E FK + P T+ LI+ L
Sbjct: 159 RFITQAGVVPNIITYNLIFQTYLDCRKPDTALENFKQFIKDAPFNPSPTTFRILIKGLVD 218
Query: 123 KRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK--GVLPDF 177
RL A + +M + PD + + LM + ++ ++ K GV+ D
Sbjct: 219 NNRLDRAMDIKDQMNASGFAPDPLVYHYLMLGHARSSDGDGVLRVYEELKEKLGGVVEDG 278
Query: 178 VTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELR 237
V ++ G G +EA+ + + G ++Y V+ +N +
Sbjct: 279 VV--------LGCLMKGYFLKGMEKEAMECYQEVFVEGKKMSDIAYNSVLDALAKNGKFD 330
Query: 238 KAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSH 297
+A L DR + + A L L ++ +++ YCA+G+ + + + M
Sbjct: 331 EAMRL---FDRMIK---EHNPPAKLAVNLG---SFNVMVDGYCAEGKFKEAIEVFRSMGE 381
Query: 298 KGSLPDSV-----IDSLLINGLDKKARTKDTKAHLLLIIADYMYTSM------PNYIIYD 346
PD++ I+ L NG+ ++ A+ +Y M P+ Y
Sbjct: 382 SRCKPDTLSFNNLIEQLCNNGM--------------ILEAEEVYGEMEGKGVNPDEYTYG 427
Query: 347 TLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI 399
L++ C FK ++AA M+E +P+ AVYN L+
Sbjct: 428 LLMDTC----FKE-----------NRPDDAASYFKKMVESGLRPNLAVYNRLV 465
>Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:21455804-21456661 | 20130731
Length = 260
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 82 ITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPP- 140
+ G C N A EF ++ +G D TY +LI ALC +R A L ++
Sbjct: 1 MKGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAERENV 60
Query: 141 --DDITFTTLMHACCLEGEFSKAFHMHHQMIHK---GVLPDFVTGFSPAL---FTYNAII 192
+ +T+ ++ + C E + AF + ++M+ K +LPD VT +SP + +T+ ++
Sbjct: 61 SLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVT-YSPLINDVYTFGIMV 119
Query: 193 HGLCFLGRVEEA-LGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
LC G VEEA + I M ++G+ PD + I G + + A ++ MD++ V
Sbjct: 120 EALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKDIFDSMDQRGV 179
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
+ + Y +I C + + L L +EM K PD+ I + +I
Sbjct: 180 --------------VPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSII 225
Query: 312 NGLDKKAR 319
+GL K R
Sbjct: 226 DGLFKSGR 233
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 25/234 (10%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPG 92
++ Q D TY +I C + V +LR + +S + ++Y +I C
Sbjct: 22 AQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAERENVSLNVVTYNPIIDSLCKENRVT 81
Query: 93 KAYEFKLEMDQK---GILPDAFTYSSLI----------QALCSKRRLSEAYHLFQEML-- 137
A++ EM K +LPD TYS LI +ALC + + EA + EM+
Sbjct: 82 DAFDLFNEMVLKYNTSLLPDVVTYSPLINDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQ 141
Query: 138 --SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGL 195
PD F + + C + A + M +GV+P+ + Y +I GL
Sbjct: 142 VGVEPDVAIFNSFIDGCFPSNQPDMAKDIFDSMDQRGVVPN--------IHNYTMMIKGL 193
Query: 196 CFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRK 249
C + RV+EAL + M ++PDA Y +I G ++ A +L EM K
Sbjct: 194 CKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLFKSGRDTCALKLVGEMHDK 247
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 38 QDLATYNKIIKQHCLMQRVEKG-VGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYE 96
D+ T+ +++ C VE+ + I M + G+ PD + I G + P A +
Sbjct: 110 NDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKD 169
Query: 97 FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACC 153
MDQ+G++P+ Y+ +I+ LC +R+ EA +LF+EM S PD +T+++
Sbjct: 170 IFDSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLF 229
Query: 154 LEGEFSKAFHMHHQMIHKGVLPDFVT 179
G + A + +M KG+ + T
Sbjct: 230 KSGRDTCALKLVGEMHDKGLPTNVFT 255
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
+ GLC G+++ A+ + G D ++Y +I+ C+ RE A L + +R+ V
Sbjct: 1 MKGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAERENV 60
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGS---LPDSVIDS 308
L+ VTY +I++ C + + L +EM K + LPD V S
Sbjct: 61 -SLNVVTYN-------------PIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTYS 106
Query: 309 LLIN-----GLDKKARTKDTKAHLLLIIADYMYTSM---PNYIIYDTLIENC-SNNEFKS 359
LIN G+ +A K+ I+ D M + P+ I+++ I+ C +N+
Sbjct: 107 PLINDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDM 166
Query: 360 VVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEM 418
+ S RG+V P+ Y ++I C+ V +A N++ EM
Sbjct: 167 AKDIFDSMDQRGVV----------------PNIHNYTMMIKGLCKIKRVDEALNLFEEM 209
>Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29889526-29890146 | 20130731
Length = 188
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
MA KG++ + SY +I GFC + +A EM K I+P+ TY+SLI L
Sbjct: 1 MASKGVT-NVPSYNTMINGFCKIKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGLSKSGI 59
Query: 126 LSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMI-HKGVLPD----- 176
+S L +M PP+ +T+ +++ A C + K + + G L D
Sbjct: 60 ISYVLQLVDQMHDRGVPPNIVTYNSILDALCKTHQVDKTIALSTKFKDQSGRLKDARNIF 119
Query: 177 ---FVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
V G++ + TY +I G C G +E+L +L M E G +AV+Y I+I N
Sbjct: 120 EDLLVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEENGCISNAVTYEIIIRSLFAN 179
Query: 234 REL 236
E+
Sbjct: 180 DEM 182
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
++ T+++ C + +A ++ +M K ++P+ VT YN++I GL G +
Sbjct: 11 SYNTMINGFCKIKKVDEAMNLFKEMHCKNIIPNVVT--------YNSLIDGLSKSGIISY 62
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLD--EVTYAY 261
L ++ M + G+ P+ V+Y ++ C+ ++ K L + + D +
Sbjct: 63 VLQLVDQMHDRGVPPNIVTYNSILDALCKTHQVDKTIALSTKFKDQSGRLKDARNIFEDL 122
Query: 262 LMQGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGL 314
L++G + +TY +I +C+ G + L L +M G + ++V ++I L
Sbjct: 123 LVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEENGCISNAVTYEIIIRSL 176
>Medtr7g091410.4 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 585
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 32/312 (10%)
Query: 14 TFRHMVRNGVVC----RFTAARN---SESIQQDLATYNKIIKQHCLMQRVEKGVGILRGM 66
TF M+ VC AA N +E ++ ++ +YN ++ + + + + +
Sbjct: 84 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 143
Query: 67 AEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRL 126
+ G PD +SY ++ + +R P KA E + + + P+ +Y++LI A S L
Sbjct: 144 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLL 203
Query: 127 SEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSP 183
+A + +EM P+ ++ TL+ AC G+ K + +G+ + V
Sbjct: 204 EDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTV----- 258
Query: 184 ALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELK 243
YN+ I +G ++A+ + M + + D+V+Y ++ISG C+ + +A
Sbjct: 259 ---AYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFM 315
Query: 244 VEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPD 303
EM +L +S E Y+S+I AY QG++ + + + M G PD
Sbjct: 316 EEM-------------MHLKLPMSKE-VYSSIICAYSKQGQIIEAESTFNLMKSLGCSPD 361
Query: 304 SVIDSLLINGLD 315
V + +++ +
Sbjct: 362 VVTYTAMLDAYN 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 184/420 (43%), Gaps = 63/420 (15%)
Query: 36 IQQDLATYNKIIKQHCL--MQRVEKGVGILRGMAEKGLS--PDALSYR-----YVITGFC 86
I+ D T+N II HCL +++ +K V I M EK PD +++ Y + G
Sbjct: 41 IRPDTTTHNIII--HCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHI 98
Query: 87 NNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDI 143
N C A+ L +G+ P+ +Y++L+ A ++ +EA +F E+ PD +
Sbjct: 99 EN-CEA-AFNMML---AEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVV 153
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
++T+L++A + KA + +MI + L P + +YNA+I G +E+
Sbjct: 154 SYTSLLNAYGRSRKPQKAREIF-KMIKRNNL-------KPNIVSYNALIDAYGSNGLLED 205
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A+ ILR M + + P+ VS +++ C R ++K+ D V A M
Sbjct: 206 AIEILREMEQDKIHPNVVSICTLLAA-CG----RCGQKVKI----------DTVLSAAEM 250
Query: 264 QGLS-DEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
+G+ + Y S I +Y GE K + L + M K DSV ++LI+G K ++ +
Sbjct: 251 RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGE 310
Query: 323 TKAHLLLIIADYMYTSMP-NYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHD 381
L + + M+ +P + +Y ++I C+ +S +G + EA +
Sbjct: 311 A----LSFMEEMMHLKLPMSKEVYSSII--CA-------------YSKQGQIIEAESTFN 351
Query: 382 TMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHG 441
M PD Y ++ + K Y ++ EM + AL+ A G
Sbjct: 352 LMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGG 411
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVIT--GFCNNRCPG 92
+++ ++ +YN +I + +E + ILR M + + P+ +S ++ G C +
Sbjct: 182 NLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKI 241
Query: 93 KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLM 149
EM +GI + Y+S I + + +A L+ M D +T+T L+
Sbjct: 242 DTVLSAAEM--RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLI 299
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
CC +F +A +M+H LP + Y++II G++ EA
Sbjct: 300 SGCCKMSKFGEALSFMEEMMHLK-LP-------MSKEVYSSIICAYSKQGQIIEAESTFN 351
Query: 210 GMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDE 269
M +G SPD V+Y ++ + + K Y L EM+ V LD + A LM+
Sbjct: 352 LMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDV-KLDTIACAALMR----- 405
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLL 329
A+ G+ +VL+L M K +P S D++ + D K + +
Sbjct: 406 --------AFNKGGQPGRVLSLAQSMREK-DIPLS--DTIFFEMVSACGLLHDWKTAVDM 454
Query: 330 IIADYMYTSMP 340
I YM S+P
Sbjct: 455 I--KYMEPSLP 463
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 154/414 (37%), Gaps = 56/414 (13%)
Query: 46 IIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKG 105
+ K C M +++ +L M G+ PD Y +I FC N K + + +M
Sbjct: 397 VWKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDAFCKNGDDKKVVDLREDMKLNQ 456
Query: 106 ILPDAFTYSSLIQALCSKRRLS-----EAYHLFQEMLSPPDDITFTTLMHACCLEGEFSK 160
I P ++S+I LC + + + D + TL+ C EG+
Sbjct: 457 IKPSIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFCREGDMVS 516
Query: 161 AFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDA 220
A + +M F+P+ F Y + I G L + AL + M + G+ PD
Sbjct: 517 AGKLLEEMGS--------NNFAPSAFCYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDT 568
Query: 221 VSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLS-DEDTYASLINAY 279
++ ++S +C+ RE +A L E + G+S + +Y IN
Sbjct: 569 IACNHILSIYCRKREFNEALALSEE---------------FRDHGVSLNPYSYNEFINKL 613
Query: 280 CAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD-TKAHLLLIIADYMYTS 338
C + K L L M + LP V S LI+ K+ +K K + +
Sbjct: 614 CRESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNI 673
Query: 339 MPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLL 398
+ + D I NC +++A + M + PD YN L
Sbjct: 674 KTHTALIDLCIRNCK-------------------IDKACDLFEDMEKRGVHPDQITYNTL 714
Query: 399 IFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTA-----LRD--HGMYNE 445
I C + A ++ M++ G ++ + + A +RD H Y+E
Sbjct: 715 IAAFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFINAYWKLDMRDQAHKWYDE 768
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNR 89
A + + D Y ++ C + +L M +P A Y I GF R
Sbjct: 488 AIGASGCKYDQTIYETLVDGFCREGDMVSAGKLLEEMGSNNFAPSAFCYCSQIKGFYKLR 547
Query: 90 CPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM------LSPPDDI 143
A + M ++GI PD + ++ C KR +EA L +E L+P
Sbjct: 548 QFANALKVYSIMQKRGIRPDTIACNHILSIYCRKREFNEALALSEEFRDHGVSLNP---Y 604
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
++ ++ C E KA + M+ + VLP V Y+ +I ++
Sbjct: 605 SYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVV--------NYSTLISCFAKQTNSKK 656
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLM 263
A+ + M ++G++ + ++ +I +N ++ KA +L +M+++ V
Sbjct: 657 AVKLFTRMTKVGITFNIKTHTALIDLCIRNCKIDKACDLFEDMEKRGVH----------- 705
Query: 264 QGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDK 316
D+ TY +LI A+C GE+ TL D M +G P+ V S IN K
Sbjct: 706 ---PDQITYNTLIAAFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFINAYWK 755
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 186/487 (38%), Gaps = 85/487 (17%)
Query: 70 GLSPDALSYRYVITGFCNN-RCPG---KAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
G +P+ +Y ++ +C + RC A E + + G P+ TYS+ I+ LC
Sbjct: 159 GPTPNIHTYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 218
Query: 126 LSEAYHLFQEML---SPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPD------ 176
L + L M P ++ F +M+ C GE +A + +M G+LPD
Sbjct: 219 LRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYV 278
Query: 177 FV----TGFSPALFTYNAIIHGLCFLGRV------EEALGI-------LRGMPEMGLSPD 219
FV G + + N ++ L RV ++ G+ + G +P+
Sbjct: 279 FVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVRCFFEDLRNFGPTPN 338
Query: 220 AVSYIIVISGFCQN----RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASL 275
+Y I+++ +C++ ++ A E+ + R + VTY+ ++GL + +
Sbjct: 339 IHAYTIMMNFYCRDVRCSADISPASEIFGNIYRSGE-TPNVVTYSTYIKGLCKAGSLRVV 397
Query: 276 INAYCAQGELFKVLTLDDEMSHKGSLPDS-----VIDSLLINGLDKKA--RTKDTK---- 324
C EL + + +EM G LPD +ID+ NG DKK +D K
Sbjct: 398 WKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDAFCKNGDDKKVVDLREDMKLNQI 457
Query: 325 -----AHLLLIIADYMYTSMPNYIIYDTLIE-NCSNNEFKSVV--GLVKSFSMRGLVNEA 376
H +I +MP I+ + S ++ + LV F G + A
Sbjct: 458 KPSIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFCREGDMVSA 517
Query: 377 ARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGF------VSHMFSV 430
+ + M N+ P Y I + A +Y M + G +H+ S+
Sbjct: 518 GKLLEEMGSNNFAPSAFCYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDTIACNHILSI 577
Query: 431 ----------LALLTALRDHGMYNERSWVIQNTLRSCNLNDSELHKVLNEIDTRKFPPIG 480
LAL RDHG+ +LN ++ +N++ FP
Sbjct: 578 YCRKREFNEALALSEEFRDHGV---------------SLNPYSYNEFINKLCRESFPEKA 622
Query: 481 ATLLDVL 487
LL V+
Sbjct: 623 LQLLPVM 629
>Medtr2g078690.1 | PPR containing plant-like protein | HC |
chr2:32882427-32884704 | 20130731
Length = 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 30 ARNSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSP--DALSYRYVITGFCN 87
++ E I ++ T+ +I++ ++E+ + I E GL D+ ++R ++ C
Sbjct: 15 SQRKEFINEE--TFYILIRRFVAAHKIEEAINIFYRREEFGLDNELDSEAFRTLLMWMCR 72
Query: 88 NRCPGKAYE-FKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDI 143
+ +A F +++ G D T++ ++ C EA L++++++ PD
Sbjct: 73 YKHIEEAETLFHRNLNKFGFCRDIKTWNVILNGWCVLGNTHEAKRLWKDIIAYKCKPDIF 132
Query: 144 TFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEE 203
T+ T + A +G+ A + ++M + P + N +I GL F R+ E
Sbjct: 133 TYATFIKAMTKKGKLGTALKLFNRMWKE-------ESCKPDVVICNCVIDGLGFKKRIPE 185
Query: 204 ALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL-DEVTYAYL 262
AL + M E G P+ +Y +I C+ R + K YEL +M+R+ L + VTY+YL
Sbjct: 186 ALQVFHDMKEWGCLPNVATYNSLIKHLCKIRRMEKVYELIEDMERRRGDCLPNGVTYSYL 245
Query: 263 MQGLSDEDTYASLI 276
+Q L + +++
Sbjct: 246 LQSLKASEEVPTVL 259
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 55 RVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYS 114
R ++ M + + PD ++ +I+G+C + G A E EM + G P+ T++
Sbjct: 193 RFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFN 252
Query: 115 SLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHK 171
+LI+ L + R+ E + EM+ D+T L+ C EG S+ + + +
Sbjct: 253 TLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKR 312
Query: 172 GVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFC 231
GVL P + Y ++ LC G +AL ++ + G P +S I++I G
Sbjct: 313 GVL--------PKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDGLR 364
Query: 232 QNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSD----ED----------------- 270
++ +A L +M ++ LD VT+ ++Q L D ED
Sbjct: 365 GLGKIEEAMRLVEKMLKEEGMVLDVVTFNSVLQDLCDAGRTEDANRLRLLASSKGLEPDA 424
Query: 271 -TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAH 326
TY L+ Y +G + + +EM KG +PD + L++ L R +A+
Sbjct: 425 MTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSNCQRPNRYQAN 481
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 50/360 (13%)
Query: 78 YRYVITGFCNN-RCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM 136
+R+ I +C + Y F + P + LI R A+ + +M
Sbjct: 145 FRFAIQYYCKAFKFDDAVYAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNQM 204
Query: 137 LS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIH 193
+ PD TF L+ C + +F A M +M G P+ VT +N +I
Sbjct: 205 VKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVT--------FNTLIK 256
Query: 194 GLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWG 253
GL RV+E +G++ M E+G V+ I++ G C+ + + +L +E ++ V
Sbjct: 257 GLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGV-- 314
Query: 254 LDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLING 313
L +G Y L+ C +GE FK L + E+ KG +P + ++I+G
Sbjct: 315 --------LPKGYD----YFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDG 362
Query: 314 LDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSN-------NEFKSVVG---- 362
L + ++ + ++ + + + + +++++++ + N + +
Sbjct: 363 LRGLGKIEEAMRLVEKMLKEE--GMVLDVVTFNSVLQDLCDAGRTEDANRLRLLASSKGL 420
Query: 363 ---------LVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLI--FDHCRRLNVHKA 411
LV + G +E + ML+ + PD A YN L+ +C+R N ++A
Sbjct: 421 EPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSNCQRPNRYQA 480
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 39 DLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFK 98
++ T+N +IK RV++G+G++ M E G ++ ++ G C + +
Sbjct: 247 NVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLL 306
Query: 99 LEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLE 155
+E ++G+LP + Y L++ LC K +A + E+ S P I+ ++
Sbjct: 307 MEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDGLRGL 366
Query: 156 GEFSKAFHMHHQMI-HKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEM 214
G+ +A + +M+ +G++ D V T+N+++ LC GR E+A +
Sbjct: 367 GKIEEAMRLVEKMLKEEGMVLDVV--------TFNSVLQDLCDAGRTEDANRLRLLASSK 418
Query: 215 GLSPDAVSYIIVISGF 230
GL PDA++Y I+++G+
Sbjct: 419 GLEPDAMTYKILVAGY 434
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 29/293 (9%)
Query: 35 SIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKA 94
S+ ++N +I C ++ EK ++ E G PD +Y I +C+++ K
Sbjct: 267 SVPLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKV 326
Query: 95 YEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHA 151
E EM G P+A TY+ L+ +LS+A ++ M PD +++LM+
Sbjct: 327 DEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYI 386
Query: 152 CCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGM 211
G A + M +GV+ D V TYN +I C + E AL +L+ M
Sbjct: 387 LGKAGRLKDACEVFDDMPKQGVVRDVV--------TYNTMISTACAHSKEETALRLLKEM 438
Query: 212 PEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGL--DEVTYAYLMQGLSDE 269
E PD +Y ++ + ++ LK +D L D TY L+Q LS+
Sbjct: 439 EETSCKPDLQTYHPLLK---MCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSN- 494
Query: 270 DTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
G+L + T +EM KG P LL L+ K+ K+
Sbjct: 495 ------------SGKLVEACTFFEEMVSKGFTPMETTVKLLTRKLEIKSMLKE 535
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 120/307 (39%), Gaps = 49/307 (15%)
Query: 169 IHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVIS 228
I VL +F + + ++N +I+G C + E+A ++ E G PD +Y I
Sbjct: 256 IAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIE 315
Query: 229 GFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKV 288
+C +++ RK E+ EM R + VTY L+ G Y G+L K
Sbjct: 316 SYCHDKDFRKVDEVLEEM-RGNGCPPNAVTYTILLLG-------------YGKAGQLSKA 361
Query: 289 LTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMP------NY 342
L + M G +PD+ S L+ L K R KD A ++ MP +
Sbjct: 362 LEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKD---------ACEVFDDMPKQGVVRDV 412
Query: 343 IIYDTLIEN-CSNNEFKSVVGLVKSFSMRGLVNEAARAH-------------------DT 382
+ Y+T+I C++++ ++ + L+K + H D
Sbjct: 413 VTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDH 472
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVRYGFVSHMFSVLALLTALRDHGM 442
M + + PD Y LL+ + +A + EMV GF +V L L M
Sbjct: 473 MFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKLEIKSM 532
Query: 443 YNERSWV 449
E+ +
Sbjct: 533 LKEKDQI 539
>Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:13907484-13905015 | 20130731
Length = 245
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 87 NNRCPGKAYEF-KLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDD 142
NN P F +LE+++ + PD T++ +I C ++ A+ L ++L P+
Sbjct: 59 NNHYPTAISLFNQLELNR--VTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNI 116
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+T TTL+ CL +A H H+ ++ G D V+ Y +I+GLC +G
Sbjct: 117 VTLTTLIKGMCLNSNVKEALHFHNHVLAHGFHLDQVS--------YGTLIYGLCKIGETR 168
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
AL +LR + ++ D V Y +I C+N+++ AYEL EM K + + VT++ L
Sbjct: 169 AALQMLRKIEGKLVNTDVVMYTAIIDSLCKNKDVNDAYELYSEMITKRI-SPNVVTFSAL 227
Query: 263 MQGL 266
+ G
Sbjct: 228 IYGF 231
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
+ D+ T+N +I +C + + +L + + G P+ ++ +I G C N +A
Sbjct: 77 VTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGMCLNSNVKEAL 136
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G D +Y +LI LC A + +++ L D + +T ++ +
Sbjct: 137 HFHNHVLAHGFHLDQVSYGTLIYGLCKIGETRAALQMLRKIEGKLVNTDVVMYTAIIDSL 196
Query: 153 CLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEAL 205
C + + A+ ++ +MI K + SP + T++A+I+G C +G+ + ++
Sbjct: 197 CKNKDVNDAYELYSEMITKRI--------SPNVVTFSALIYGFCMVGQFKTSI 241
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 71 LSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAY 130
++PD +++ VI +C+ A+ ++ + G P+ T ++LI+ +C + EA
Sbjct: 77 VTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGMCLNSNVKEAL 136
Query: 131 HLFQEMLSPP---DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFT 187
H +L+ D +++ TL++ C GE A M ++ K V D V
Sbjct: 137 HFHNHVLAHGFHLDQVSYGTLIYGLCKIGETRAALQMLRKIEGKLVNTDVVM-------- 188
Query: 188 YNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
Y AII LC V +A + M +SP+ V++ +I GFC + + +
Sbjct: 189 YTAIIDSLCKNKDVNDAYELYSEMITKRISPNVVTFSALIYGFCMVGQFKTS 240
>Medtr0652s0020.1 | PPR superfamily protein | LC |
scaffold0652:7157-3598 | 20130731
Length = 364
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 105 GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKA 161
GI P+ FT++ LI C + A+ + ++L P+ +T TL+ CL G+ +A
Sbjct: 170 GITPNLFTFNILINCYCHLGEMDFAFSMLSKILKMGFQPNTVTLNTLVKGMCLNGKVKEA 229
Query: 162 FHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAV 221
H H +I GF TY +I+GLC +G+ EAL +LR + ++ V
Sbjct: 230 LHFHDHVI--------ALGFHLNQITYGTLINGLCKMGKTTEALQVLRKIDGKLVNTGVV 281
Query: 222 SYIIVISGFCQNRELRKAYELKVEM--------------DRKVVWG 253
Y +I C+ + + +AYEL +M RKV WG
Sbjct: 282 MYNTIIDSLCKEKLVTEAYELYSQMIFYMVESRTSCATVVRKVGWG 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 180 GFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKA 239
G +P LFT+N +I+ C LG ++ A +L + +MG P+ V+ ++ G C N ++++A
Sbjct: 170 GITPNLFTFNILINCYCHLGEMDFAFSMLSKILKMGFQPNTVTLNTLVKGMCLNGKVKEA 229
Query: 240 YELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQG---ELFKVL-TLDDEM 295
D + G ++ TY +LIN C G E +VL +D ++
Sbjct: 230 LHFH---DHVIALGFH-----------LNQITYGTLINGLCKMGKTTEALQVLRKIDGKL 275
Query: 296 SHKG-SLPDSVIDSL 309
+ G + +++IDSL
Sbjct: 276 VNTGVVMYNTIIDSL 290
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 140 PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLG 199
P+ TF L++ C GE AF M +++ GF P T N ++ G+C G
Sbjct: 173 PNLFTFNILINCYCHLGEMDFAFSMLSKILK--------MGFQPNTVTLNTLVKGMCLNG 224
Query: 200 RVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTY 259
+V+EAL + +G + ++Y +I+G C+ + +A ++ ++D K+V V Y
Sbjct: 225 KVKEALHFHDHVIALGFHLNQITYGTLINGLCKMGKTTEALQVLRKIDGKLV-NTGVVMY 283
Query: 260 AYLMQGLSDE 269
++ L E
Sbjct: 284 NTIIDSLCKE 293
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 36 IQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAY 95
I +L T+N +I +C + ++ +L + + G P+ ++ ++ G C N +A
Sbjct: 171 ITPNLFTFNILINCYCHLGEMDFAFSMLSKILKMGFQPNTVTLNTLVKGMCLNGKVKEAL 230
Query: 96 EFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEM---LSPPDDITFTTLMHAC 152
F + G + TY +LI LC + +EA + +++ L + + T++ +
Sbjct: 231 HFHDHVIALGFHLNQITYGTLINGLCKMGKTTEALQVLRKIDGKLVNTGVVMYNTIIDSL 290
Query: 153 CLEGEFSKAFHMHHQMI 169
C E ++A+ ++ QMI
Sbjct: 291 CKEKLVTEAYELYSQMI 307
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 43 YNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMD 102
Y+ I+ C +VE+ + ++ + + ++ + L+Y ++ G +A M
Sbjct: 837 YSLFIRALCRAGKVEEALKLVEEVGAEKINVEKLTYGSIVHGLLQKGKLEEALTKVSRMK 896
Query: 103 QKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEFS 159
Q+GI P Y+SLI ++ + +A ++ EML P+ +T++ L+ G ++
Sbjct: 897 QEGITPTIHVYTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYN 956
Query: 160 KAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPD 219
A+++ ++M KG PDF TY+ + LC GR EEA+ ++ M E G+ P
Sbjct: 957 DAWNVFYRMKFKGPFPDFK--------TYSMFLSCLCKAGRSEEAMRLISEMLESGIVPS 1008
Query: 220 AVSYIIVISGFCQNRE-----LRKAYELKVEMDRK 249
+++ V G NRE R + K E+ RK
Sbjct: 1009 TINFRTVFYGL--NREGKQGLARVVLQQKSELIRK 1041
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 120/289 (41%), Gaps = 35/289 (12%)
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFC--NNRCPGKAYEFKLEMDQKGILPDAFTYS 114
E + + M + G SP +Y+Y+I C R A + EM G +PD
Sbjct: 745 EMAMNCFKEMKDGGYSPSRSTYKYLIIALCGRKGRKIDDALKIYGEMVNSGHVPDKELIE 804
Query: 115 SLIQALCSKRRLSEAYHLFQEM--LSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
+ + LC R+ +A + + ++ + A C G+ +A + ++ +
Sbjct: 805 TYLGCLCEMGRILDARKCIDSLQRFGYTVPLCYSLFIRALCRAGKVEEALKLVEEVGAEK 864
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+ + TY +I+HGL G++EEAL + M + G++P Y +I F +
Sbjct: 865 I--------NVEKLTYGSIVHGLLQKGKLEEALTKVSRMKQEGITPTIHVYTSLIVHFFK 916
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQG----------------------LSDED 270
+ + KA ++ EM + + + VTY+ L++G D
Sbjct: 917 QKHVEKAIQIYAEM-LESGYEPNVVTYSALIRGYMNVGRYNDAWNVFYRMKFKGPFPDFK 975
Query: 271 TYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKAR 319
TY+ ++ C G + + L EM G +P ++ + GL+++ +
Sbjct: 976 TYSMFLSCLCKAGRSEEAMRLISEMLESGIVPSTINFRTVFYGLNREGK 1024
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 130/321 (40%), Gaps = 34/321 (10%)
Query: 4 LRDSFTATLKTFRHMV-------RNGVVCRFTAARNSESIQQDLATYNKIIKQHCLMQRV 56
L+ F T +T+ M+ G+V + + +Q+D+ T+ ++ + +++
Sbjct: 193 LKGGFRHTTQTYNTMLCLVGEGKEFGLVKKLVDEMDECRVQKDVNTWTILVSLYGKAKKI 252
Query: 57 EKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGI-LPDAFTYSS 115
+ + M + G PD +SYR +I C++ A EF +M +K I L D Y
Sbjct: 253 SEALLAFENMQKCGCEPDVVSYRTIIRLLCSSGKGDIAMEFYKDMVKKDIVLDDVRLYKM 312
Query: 116 LIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKG 172
L+ + ++ L +M P++ F ++ + C+ G +A + + +K
Sbjct: 313 LMNCMAESGDVAAVNLLGNDMTRLCLMPENSVFGCMLKSFCISGRIKEALELIRDLKYKD 372
Query: 173 VLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+ P F ++ GLC GR+ +AL I+ M + V II I+G+ +
Sbjct: 373 AV------LEPEYF--ETLVRGLCKAGRISDALEIVEIMKRRDIVVWNVQGII-INGYLR 423
Query: 233 NRELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLD 292
+ A + V + E Y + +Y LI + +
Sbjct: 424 RNDFCMALD--------VFQSMKESGYVPTVS------SYTELIQHLFKLSRYEEACMMY 469
Query: 293 DEMSHKGSLPDSVIDSLLING 313
DEM KG PD V + ++ G
Sbjct: 470 DEMLGKGIKPDIVAMTAMVAG 490
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 32 NSESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCP 91
E I + Y +I + VEK + I M E G P+ ++Y +I G+ N
Sbjct: 896 KQEGITPTIHVYTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRY 955
Query: 92 GKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTL 148
A+ M KG PD TYS + LC R EA L EML P I F T+
Sbjct: 956 NDAWNVFYRMKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLISEMLESGIVPSTINFRTV 1015
Query: 149 MHACCLEGE 157
+ EG+
Sbjct: 1016 FYGLNREGK 1024
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 175/449 (38%), Gaps = 66/449 (14%)
Query: 12 LKTFRHM-VRNGVVCR-FTAARNSESIQQDLATYNKIIKQHCLMQRVEK----GVGILRG 65
LKT+ VR+ VCR +++ + SIQ+ L N +M+ ++ G +L
Sbjct: 622 LKTYSEQDVRD--VCRILSSSLDWSSIQEKLEISNIEFTPEFVMEIMQSCSMHGCTVLNF 679
Query: 66 MAEKGLSPDALSYRYVITGF-CNNRCPGKAYEFK------LEMDQKGILPDAFTYSSLIQ 118
+ G P YR+ + + G+ +FK EM + L + T++ +I
Sbjct: 680 FSWVGKRP---GYRHTTESYNIAIKIAGRGKDFKHMRSLLYEMRRNNYLITSETWTIMIM 736
Query: 119 ALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEG--EFSKAFHMHHQMIHKGV 173
A + F+EM P T+ L+ A C + A ++ +M++ G
Sbjct: 737 IYGRTGLTEMAMNCFKEMKDGGYSPSRSTYKYLIIALCGRKGRKIDDALKIYGEMVNSGH 796
Query: 174 LPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQN 233
+PD + TY + LC +GR+ +A + + G + + Y + I C+
Sbjct: 797 VPD-----KELIETY---LGCLCEMGRILDARKCIDSLQRFGYTV-PLCYSLFIRALCRA 847
Query: 234 RELRKAYELKVEMDRKVVWGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDD 293
++ +A +L E+ G +++ L TY S+++ +G+L + LT
Sbjct: 848 GKVEEALKLVEEV------GAEKINVEKL--------TYGSIVHGLLQKGKLEEALTKVS 893
Query: 294 EMSHKGSLPD-SVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENC 352
M +G P V SL+++ +K K + + ++ + Y PN + Y LI
Sbjct: 894 RMKQEGITPTIHVYTSLIVHFFKQKHVEKAIQIYAEMLESGYE----PNVVTYSALIRGY 949
Query: 353 SNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAY 412
N G N+A M PD Y++ + C+ +A
Sbjct: 950 MNV---------------GRYNDAWNVFYRMKFKGPFPDFKTYSMFLSCLCKAGRSEEAM 994
Query: 413 NMYMEMVRYGFVSHMFSVLALLTALRDHG 441
+ EM+ G V + + L G
Sbjct: 995 RLISEMLESGIVPSTINFRTVFYGLNREG 1023
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 124/323 (38%), Gaps = 69/323 (21%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEK 58
KL D FT L T + + G V C RNS D+ Y +I C + R +
Sbjct: 163 KLTSDHFTYLLDT---LCKYGYVKHACEL-FNRNSNRFVADVKMYTVLIYGWCKIGRFKT 218
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRC--PGKAYEFKLE---------------- 100
+ L M KG+ P+ ++Y ++ G C P + +E +
Sbjct: 219 ALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEP 278
Query: 101 ---------------------------MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
M +KGI P+ TY+S+I+ LCS R+ EA L
Sbjct: 279 DVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLI 338
Query: 134 QEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNA 190
EM+ P T+ + KA +M G+ P TY
Sbjct: 339 DEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLC-------EPTTHTYGV 391
Query: 191 IIHGLC---FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
+I +G V+E I M E G+ PD SY ++I G C++++ R+A + VEM
Sbjct: 392 LIAMFLKADMIGVVKE---IWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMI 448
Query: 248 RKVVWGLDEVTYAYLMQGLSDED 270
K +VT+ L +GL D
Sbjct: 449 EKGFLP-QKVTFETLYRGLIQSD 470
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 41/259 (15%)
Query: 34 ESIQQDLATYNKIIKQHCLM------QRVEKGV----GILRGMAEKGLSPDALSYRYVIT 83
+ ++ ++ TYN I+ C +R E+ + + M E G+ PD S+ V+
Sbjct: 229 KGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLH 288
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PP 140
+ P + M +KGI P+ TY+S+I+ LCS R+ EA L EM+ P
Sbjct: 289 VYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSP 348
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL----------------PDFV------ 178
T+ + KA +M G+ D +
Sbjct: 349 CAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEI 408
Query: 179 ------TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+G P L +Y +IHGLC + EA M E G P V++ + G Q
Sbjct: 409 WNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQ 468
Query: 233 NRELRKAYELKVEMDRKVV 251
+ LR LK +D++ +
Sbjct: 469 SDMLRTWRRLKKRLDQESI 487
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 153/391 (39%), Gaps = 65/391 (16%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPD-DIT---FTTLM 149
A + +EMDQ + P T+ LI+ L S +A F E+ S D +T FT L+
Sbjct: 114 ASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLL 173
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C G A + ++ ++ F + Y +I+G C +GR + AL L
Sbjct: 174 DTLCKYGYVKHACELFNRNSNR---------FVADVKMYTVLIYGWCKIGRFKTALSFLN 224
Query: 210 GMPEMGLSPDAVSYIIVISGFCQN----------RELRKAYELKVEMDRKVVWGLDEVTY 259
M G+ P+ V+Y ++++G C+ R +R A ++ EM R+ D ++
Sbjct: 225 EMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEM-RESGIEPDVTSF 283
Query: 260 AYLMQ---------------GLSDED-------TYASLINAYCAQGELFKVLTLDDEMSH 297
+ ++ GL E TY S+I C+ G + + L DEM
Sbjct: 284 SIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVR 343
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
G P + N K+ R + L + M D L E ++ +
Sbjct: 344 NGVSPCAAT----YNCFFKEYRGRKDADKAL-----KFFKKMKE----DGLCEPTTHT-Y 389
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
++ + M G+V E + M+E PD Y +LI C +A ++E
Sbjct: 390 GVLIAMFLKADMIGVVKEIW---NDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVE 446
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
M+ GF+ + L L M R+W
Sbjct: 447 MIEKGFLPQKVTFETLYRGLIQSDML--RTW 475
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 124/323 (38%), Gaps = 69/323 (21%)
Query: 2 KLLRDSFTATLKTFRHMVRNGVV---CRFTAARNSESIQQDLATYNKIIKQHCLMQRVEK 58
KL D FT L T + + G V C RNS D+ Y +I C + R +
Sbjct: 163 KLTSDHFTYLLDT---LCKYGYVKHACEL-FNRNSNRFVADVKMYTVLIYGWCKIGRFKT 218
Query: 59 GVGILRGMAEKGLSPDALSYRYVITGFCNNRC--PGKAYEFKLE---------------- 100
+ L M KG+ P+ ++Y ++ G C P + +E +
Sbjct: 219 ALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEP 278
Query: 101 ---------------------------MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLF 133
M +KGI P+ TY+S+I+ LCS R+ EA L
Sbjct: 279 DVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLI 338
Query: 134 QEMLS---PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNA 190
EM+ P T+ + KA +M G+ P TY
Sbjct: 339 DEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLC-------EPTTHTYGV 391
Query: 191 IIHGLC---FLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMD 247
+I +G V+E I M E G+ PD SY ++I G C++++ R+A + VEM
Sbjct: 392 LIAMFLKADMIGVVKE---IWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMI 448
Query: 248 RKVVWGLDEVTYAYLMQGLSDED 270
K +VT+ L +GL D
Sbjct: 449 EKGFLP-QKVTFETLYRGLIQSD 470
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 41/259 (15%)
Query: 34 ESIQQDLATYNKIIKQHCLM------QRVEKGV----GILRGMAEKGLSPDALSYRYVIT 83
+ ++ ++ TYN I+ C +R E+ + + M E G+ PD S+ V+
Sbjct: 229 KGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLH 288
Query: 84 GFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PP 140
+ P + M +KGI P+ TY+S+I+ LCS R+ EA L EM+ P
Sbjct: 289 VYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSP 348
Query: 141 DDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVL----------------PDFV------ 178
T+ + KA +M G+ D +
Sbjct: 349 CAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEI 408
Query: 179 ------TGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQ 232
+G P L +Y +IHGLC + EA M E G P V++ + G Q
Sbjct: 409 WNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQ 468
Query: 233 NRELRKAYELKVEMDRKVV 251
+ LR LK +D++ +
Sbjct: 469 SDMLRTWRRLKKRLDQESI 487
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 153/391 (39%), Gaps = 65/391 (16%)
Query: 94 AYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSPPD-DIT---FTTLM 149
A + +EMDQ + P T+ LI+ L S +A F E+ S D +T FT L+
Sbjct: 114 ASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLL 173
Query: 150 HACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILR 209
C G A + ++ ++ F + Y +I+G C +GR + AL L
Sbjct: 174 DTLCKYGYVKHACELFNRNSNR---------FVADVKMYTVLIYGWCKIGRFKTALSFLN 224
Query: 210 GMPEMGLSPDAVSYIIVISGFCQN----------RELRKAYELKVEMDRKVVWGLDEVTY 259
M G+ P+ V+Y ++++G C+ R +R A ++ EM R+ D ++
Sbjct: 225 EMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEM-RESGIEPDVTSF 283
Query: 260 AYLMQ---------------GLSDED-------TYASLINAYCAQGELFKVLTLDDEMSH 297
+ ++ GL E TY S+I C+ G + + L DEM
Sbjct: 284 SIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVR 343
Query: 298 KGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEF 357
G P + N K+ R + L + M D L E ++ +
Sbjct: 344 NGVSPCAAT----YNCFFKEYRGRKDADKAL-----KFFKKMKE----DGLCEPTTHT-Y 389
Query: 358 KSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYME 417
++ + M G+V E + M+E PD Y +LI C +A ++E
Sbjct: 390 GVLIAMFLKADMIGVVKEIW---NDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVE 446
Query: 418 MVRYGFVSHMFSVLALLTALRDHGMYNERSW 448
M+ GF+ + L L M R+W
Sbjct: 447 MIEKGFLPQKVTFETLYRGLIQSDML--RTW 475
>Medtr4g068800.4 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
+Y+ +I C R+E + M +K + D +SY +I GFC G+A EF EM
Sbjct: 281 SYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM 340
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
GI TY L++ C + A ++++ML PD T ++ C +G
Sbjct: 341 GLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRV 400
Query: 159 SKAFHMHHQMIHKGVLP-DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + + GV D V P +Y A+I G CF GR++EAL + M G
Sbjct: 401 EEAM----KFLRSGVGKFDLV----PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEM 246
++ Y + I G+ + A L+ EM
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEM 481
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 42/302 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILR---------------GMAEKG---LSPD 74
S I +AT N +I + C V+ G I R G +G + P+
Sbjct: 184 SRGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPN 243
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
S+ + + K E EM + G P+A++YS LI A C R+ + +++
Sbjct: 244 VHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWE 303
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
EM D +++ T++ C G+ +A + +M + G + TY +
Sbjct: 304 EMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM--------GLVGIDATVSTYEHL 355
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
+ G C + VE A+ + + M PDA + +V+ C + +A ++ R V
Sbjct: 356 VKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEA----MKFLRSGV 411
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D V E +Y +LI +C +G + + L L EM KG +S I + I
Sbjct: 412 GKFDLV---------PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSEIYEVFI 462
Query: 312 NG 313
+G
Sbjct: 463 DG 464
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 131/338 (38%), Gaps = 60/338 (17%)
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---------------------PPDD 142
+GI P T ++LI +C K + + +++E P+
Sbjct: 185 RGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNV 244
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+F T M C G K + ++M G P ++Y+ +I C GR+E
Sbjct: 245 HSFNTFMLCCYQSGLVEKVEEIWNEMSEMGC--------DPNAYSYSLLIAAFCDGGRME 296
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+ + M + + D VSY +I GFC+ ++ +A E EM + G+D
Sbjct: 297 DCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMG---LVGIDATV---- 349
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY L+ YC ++ + + +M K PD+ +++ L K R ++
Sbjct: 350 -------STYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEE 402
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
L + +D + + KS L+K F G ++EA +
Sbjct: 403 AMKFLRSGVGK-----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAE 445
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
ML ++ + +Y + I + R+ + A + EM++
Sbjct: 446 MLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr4g068800.3 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
+Y+ +I C R+E + M +K + D +SY +I GFC G+A EF EM
Sbjct: 281 SYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM 340
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
GI TY L++ C + A ++++ML PD T ++ C +G
Sbjct: 341 GLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRV 400
Query: 159 SKAFHMHHQMIHKGVLP-DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + + GV D V P +Y A+I G CF GR++EAL + M G
Sbjct: 401 EEAM----KFLRSGVGKFDLV----PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEM 246
++ Y + I G+ + A L+ EM
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEM 481
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 42/302 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILR---------------GMAEKG---LSPD 74
S I +AT N +I + C V+ G I R G +G + P+
Sbjct: 184 SRGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPN 243
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
S+ + + K E EM + G P+A++YS LI A C R+ + +++
Sbjct: 244 VHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWE 303
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
EM D +++ T++ C G+ +A + +M + G + TY +
Sbjct: 304 EMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM--------GLVGIDATVSTYEHL 355
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
+ G C + VE A+ + + M PDA + +V+ C + +A ++ R V
Sbjct: 356 VKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEA----MKFLRSGV 411
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D V E +Y +LI +C +G + + L L EM KG +S I + I
Sbjct: 412 GKFDLV---------PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSEIYEVFI 462
Query: 312 NG 313
+G
Sbjct: 463 DG 464
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 131/338 (38%), Gaps = 60/338 (17%)
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---------------------PPDD 142
+GI P T ++LI +C K + + +++E P+
Sbjct: 185 RGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNV 244
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+F T M C G K + ++M G P ++Y+ +I C GR+E
Sbjct: 245 HSFNTFMLCCYQSGLVEKVEEIWNEMSEMGC--------DPNAYSYSLLIAAFCDGGRME 296
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+ + M + + D VSY +I GFC+ ++ +A E EM + G+D
Sbjct: 297 DCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMG---LVGIDATV---- 349
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY L+ YC ++ + + +M K PD+ +++ L K R ++
Sbjct: 350 -------STYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEE 402
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
L + +D + + KS L+K F G ++EA +
Sbjct: 403 AMKFLRSGVGK-----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAE 445
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
ML ++ + +Y + I + R+ + A + EM++
Sbjct: 446 MLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr4g068800.5 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
+Y+ +I C R+E + M +K + D +SY +I GFC G+A EF EM
Sbjct: 281 SYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM 340
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
GI TY L++ C + A ++++ML PD T ++ C +G
Sbjct: 341 GLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRV 400
Query: 159 SKAFHMHHQMIHKGVLP-DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + + GV D V P +Y A+I G CF GR++EAL + M G
Sbjct: 401 EEAM----KFLRSGVGKFDLV----PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEM 246
++ Y + I G+ + A L+ EM
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEM 481
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 42/302 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILR---------------GMAEKG---LSPD 74
S I +AT N +I + C V+ G I R G +G + P+
Sbjct: 184 SRGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPN 243
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
S+ + + K E EM + G P+A++YS LI A C R+ + +++
Sbjct: 244 VHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWE 303
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
EM D +++ T++ C G+ +A + +M + G + TY +
Sbjct: 304 EMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM--------GLVGIDATVSTYEHL 355
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
+ G C + VE A+ + + M PDA + +V+ C + +A ++ R V
Sbjct: 356 VKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEA----MKFLRSGV 411
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D V E +Y +LI +C +G + + L L EM KG +S I + I
Sbjct: 412 GKFDLV---------PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSEIYEVFI 462
Query: 312 NG 313
+G
Sbjct: 463 DG 464
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 131/338 (38%), Gaps = 60/338 (17%)
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---------------------PPDD 142
+GI P T ++LI +C K + + +++E P+
Sbjct: 185 RGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNV 244
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+F T M C G K + ++M G P ++Y+ +I C GR+E
Sbjct: 245 HSFNTFMLCCYQSGLVEKVEEIWNEMSEMGC--------DPNAYSYSLLIAAFCDGGRME 296
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+ + M + + D VSY +I GFC+ ++ +A E EM + G+D
Sbjct: 297 DCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMG---LVGIDATV---- 349
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY L+ YC ++ + + +M K PD+ +++ L K R ++
Sbjct: 350 -------STYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEE 402
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
L + +D + + KS L+K F G ++EA +
Sbjct: 403 AMKFLRSGVGK-----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAE 445
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
ML ++ + +Y + I + R+ + A + EM++
Sbjct: 446 MLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr4g068800.2 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 42 TYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEM 101
+Y+ +I C R+E + M +K + D +SY +I GFC G+A EF EM
Sbjct: 281 SYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM 340
Query: 102 DQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLSP---PDDITFTTLMHACCLEGEF 158
GI TY L++ C + A ++++ML PD T ++ C +G
Sbjct: 341 GLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRV 400
Query: 159 SKAFHMHHQMIHKGVLP-DFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
+A + + GV D V P +Y A+I G CF GR++EAL + M G
Sbjct: 401 EEAM----KFLRSGVGKFDLV----PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 218 PDAVSYIIVISGFCQNRELRKAYELKVEM 246
++ Y + I G+ + A L+ EM
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEM 481
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 42/302 (13%)
Query: 33 SESIQQDLATYNKIIKQHCLMQRVEKGVGILR---------------GMAEKG---LSPD 74
S I +AT N +I + C V+ G I R G +G + P+
Sbjct: 184 SRGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPN 243
Query: 75 ALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQ 134
S+ + + K E EM + G P+A++YS LI A C R+ + +++
Sbjct: 244 VHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWE 303
Query: 135 EMLSP---PDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAI 191
EM D +++ T++ C G+ +A + +M + G + TY +
Sbjct: 304 EMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREM--------GLVGIDATVSTYEHL 355
Query: 192 IHGLCFLGRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVV 251
+ G C + VE A+ + + M PDA + +V+ C + +A ++ R V
Sbjct: 356 VKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEA----MKFLRSGV 411
Query: 252 WGLDEVTYAYLMQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLI 311
D V E +Y +LI +C +G + + L L EM KG +S I + I
Sbjct: 412 GKFDLV---------PKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSEIYEVFI 462
Query: 312 NG 313
+G
Sbjct: 463 DG 464
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 131/338 (38%), Gaps = 60/338 (17%)
Query: 104 KGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---------------------PPDD 142
+GI P T ++LI +C K + + +++E P+
Sbjct: 185 RGISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNV 244
Query: 143 ITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVE 202
+F T M C G K + ++M G P ++Y+ +I C GR+E
Sbjct: 245 HSFNTFMLCCYQSGLVEKVEEIWNEMSEMGC--------DPNAYSYSLLIAAFCDGGRME 296
Query: 203 EALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVTYAYL 262
+ + M + + D VSY +I GFC+ ++ +A E EM + G+D
Sbjct: 297 DCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMG---LVGIDATV---- 349
Query: 263 MQGLSDEDTYASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKD 322
TY L+ YC ++ + + +M K PD+ +++ L K R ++
Sbjct: 350 -------STYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEE 402
Query: 323 TKAHLLLIIADYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDT 382
L + +D + + KS L+K F G ++EA +
Sbjct: 403 AMKFLRSGVGK-----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAE 445
Query: 383 MLEGNYKPDGAVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
ML ++ + +Y + I + R+ + A + EM++
Sbjct: 446 MLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr8g463610.1 | PPR containing plant-like protein | HC |
chr8:22423507-22425972 | 20130731
Length = 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 128/313 (40%), Gaps = 80/313 (25%)
Query: 66 MAEKGLSPDALSYRYVITGFCNNRCPGKAYEFKLEMDQKGILPDAFTYSSLIQALCSKRR 125
M ++G+ PD + Y +I G G+A + EM Q G+ PDA+ Y+++IQ LC
Sbjct: 1 MFKEGIVPDVVLYAIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVIQGLCDVGL 60
Query: 126 LSEAYHLFQEMLSPPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPAL 185
L+ A+ L E +S + T T L+ C G ++A + +QM G P++
Sbjct: 61 LNRAHSLLLE-ISEHNVCTHTILICEMCKRGMVAEAQELFNQMEK--------LGCEPSV 111
Query: 186 FTYNAIIHGLCFL-----------------------------GRVEEALGILRGMPEM-- 214
T+N +I+GLC G+V ++ +L+ EM
Sbjct: 112 VTFNTLINGLCKANNLEKAKILFCKLEVGRRLSLHLSLSQGSGQVSDSARLLKKAKEMCE 171
Query: 215 ----------------GLSPDAVSYIIVISGFCQNRELRKAYELKVEMDRKVVWGLDEVT 258
+ PD ++Y I+++ C +RE+ AY + +K + VT
Sbjct: 172 AGQILRAYKLIANLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPNNVT 231
Query: 259 YAYLMQGL-------------------SDEDT---YASLINAYCAQGELFKVLTLDDEMS 296
Y +++GL S E T Y +L+ C + ++ TL +
Sbjct: 232 YGTIIKGLFMVDREDEAFKVFQRMQKTSSEPTLSVYRTLMTCLCRKSKVSCAFTL--YLE 289
Query: 297 HKGSLPDSVIDSL 309
H SLP DS+
Sbjct: 290 HLKSLPSRDNDSI 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 44/328 (13%)
Query: 101 MDQKGILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS---PPDDITFTTLMHACCLEGE 157
M ++GI+PD Y+ +I+ L + R+ EA + EM PD + ++ C G
Sbjct: 1 MFKEGIVPDVVLYAIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVIQGLCDVGL 60
Query: 158 FSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFLGRVEEALGILRGMPEMGLS 217
++A + ++ V T+ +I +C G V EA + M ++G
Sbjct: 61 LNRAHSLLLEISEHNVC------------THTILICEMCKRGMVAEAQELFNQMEKLGCE 108
Query: 218 PDAVSYIIVISGFCQNRELRKAYEL--KVEMDRKVVWGLDEVTYAYLMQG---LSDEDTY 272
P V++ +I+G C+ L KA L K+E+ R++ L L QG +SD
Sbjct: 109 PSVVTFNTLINGLCKANNLEKAKILFCKLEVGRRLSLHLS------LSQGSGQVSDSARL 162
Query: 273 ASLINAYCAQGELFKVLTLDDEMSHKGSLPDSVIDSLLINGLDKKARTKDTKAHLLLIIA 332
C G++ + L ++ + PD + ++L+N L R + + +
Sbjct: 163 LKKAKEMCEAGQILRAYKLIANLAGEVK-PDIITYNILLNALCMD-REVNAAYNFFEFLQ 220
Query: 333 DYMYTSMPNYIIYDTLIENCSNNEFKSVVGLVKSFSMRGLVNEAARAHDTMLEGNYKPDG 392
Y S PN + Y T+I K M +EA + M + + +P
Sbjct: 221 KKGYPS-PNNVTYGTII---------------KGLFMVDREDEAFKVFQRMQKTSSEPTL 264
Query: 393 AVYNLLIFDHCRRLNVHKAYNMYMEMVR 420
+VY L+ CR+ V A+ +Y+E ++
Sbjct: 265 SVYRTLMTCLCRKSKVSCAFTLYLEHLK 292
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 34 ESIQQDLATYNKIIKQHCLMQRVEKGVGILRGMAEKGLSPDALSYRYVITGFC--NNRCP 91
E + ++ T+ +I + C V + + M + G P +++ +I G C NN
Sbjct: 70 EISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEK 129
Query: 92 GKAYEFKLEMDQK-----------GILPDAFTYSSLIQALCSKRRLSEAYHLFQEMLS-- 138
K KLE+ ++ G + D+ + +C ++ AY L +
Sbjct: 130 AKILFCKLEVGRRLSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLIANLAGEV 189
Query: 139 PPDDITFTTLMHACCLEGEFSKAFHMHHQMIHKGVLPDFVTGFSPALFTYNAIIHGLCFL 198
PD IT+ L++A C++ E + A++ + KG P SP TY II GL +
Sbjct: 190 KPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY-P------SPNNVTYGTIIKGLFMV 242
Query: 199 GRVEEALGILRGMPEMGLSPDAVSYIIVISGFCQNRELRKAYELKVE 245
R +EA + + M + P Y +++ C+ ++ A+ L +E
Sbjct: 243 DREDEAFKVFQRMQKTSSEPTLSVYRTLMTCLCRKSKVSCAFTLYLE 289