Miyakogusa Predicted Gene

Lj0g3v0101179.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S4J2_LOTJA 315 100.0 100.0 (tr|I3S4J2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G04240.2 179 61.5 76.3 | Symbols: XERICO | RING/U-box superfamily protein | chr2:1461816-1462304 REVERSE LENGTH=162
Medicago Medtr3g082510.1 220 73.2 84.7 | RING-H2 zinc finger protein | HC | chr3:37246424-37244777 | 20130731
Soybean Glyma13g11570.2 237 77.4 85.8  
LJGI gnl|LJGI|TC57565 908 99.6 99.6 similar to UniRef100_A7Q2X1 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0101179.1 length: 154 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 5.1e-14 97-143
HMMSmart SM00184 Ring 8.7e-07 99-140
ProfileScan PS50089 ZF_RING_2 13.315 99-141
IPR011016 Zinc finger, RING-CH-type
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00744 The 0.004 98-141
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.1e-15 95-144
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 88-140
no_ID  
HMMPanther PTHR14155 RING 3.6e-14 80-150
HMMPanther PTHR14155:SF40 SUBFAMILY 3.6e-14 80-150
superfamily SSF57850 RING/U-box 4.5e-17 92-147
Putative transmembrane regions
  From To
TM segments
SOSUI		 17 39
Wolf-PSORT
Lj0g3v0101179.1	chlo 6, extr 4, cyto 2, mito 1, vacu 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0101179.1