Miyakogusa Predicted Gene
- Lj0g3v0101179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101179.1 Non Chatacterized Hit- tr|K3YJX5|K3YJX5_SETIT
Uncharacterized protein OS=Setaria italica GN=Si014544,35.9,5e-19,The
RING-variant domain is a C4HC3 zinc-fing,Zinc finger, RING-CH-type;
Ring finger,Zinc finger, RIN,CUFF.5672.1
(154 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 179 1e-45
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 179 1e-45
AT1G67856.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 9e-16
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 77 3e-15
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 67 6e-12
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 66 1e-11
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 65 2e-11
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 64 3e-11
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 64 3e-11
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 4e-11
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 2e-10
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 2e-10
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 1e-09
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 1e-09
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 1e-09
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 59 1e-09
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 2e-09
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 59 2e-09
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 2e-09
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 58 3e-09
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 5e-09
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 5e-09
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 7e-09
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 8e-09
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 56 9e-09
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 3e-08
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 4e-08
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 5e-08
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 5e-08
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 6e-08
AT1G24580.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 6e-08
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 7e-08
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 7e-08
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 9e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 1e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 1e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 1e-07
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 52 1e-07
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 1e-07
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 52 2e-07
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 2e-07
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 2e-07
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 2e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 2e-07
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 2e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 51 3e-07
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 51 4e-07
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 4e-07
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 4e-07
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 50 4e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 5e-07
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 50 5e-07
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 5e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 50 5e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 5e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 50 5e-07
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 50 6e-07
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 7e-07
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 7e-07
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 50 8e-07
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 8e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 9e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 50 9e-07
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 50 9e-07
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 9e-07
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 1e-06
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 1e-06
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-06
AT2G20650.2 | Symbols: | RING/U-box superfamily protein | chr2:... 49 1e-06
AT2G20650.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 1e-06
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 1e-06
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-06
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 2e-06
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 2e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 2e-06
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 48 2e-06
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 48 3e-06
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 48 3e-06
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 48 3e-06
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 48 3e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 48 3e-06
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 3e-06
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 3e-06
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 4e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 47 4e-06
AT5G51450.2 | Symbols: RIN3 | RPM1 interacting protein 3 | chr5:... 47 4e-06
AT4G25230.2 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:... 47 4e-06
AT4G25230.1 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:... 47 4e-06
AT5G51450.1 | Symbols: RIN3 | RPM1 interacting protein 3 | chr5:... 47 4e-06
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 47 5e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 5e-06
AT5G25560.3 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 47 6e-06
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 6e-06
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 47 6e-06
AT5G25560.2 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 47 6e-06
AT5G25560.4 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 47 6e-06
AT5G25560.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 47 7e-06
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 7e-06
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 7e-06
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 7e-06
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 46 8e-06
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 46 8e-06
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 46 9e-06
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 46 9e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 46 9e-06
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 46 9e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 46 9e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 46 9e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 46 9e-06
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 119/156 (76%), Gaps = 10/156 (6%)
Query: 1 MGLSSLPAPSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPS 60
MGLSSLP PSEG+LC+ILVNTA+SISIVK I R+FL IVGI +S S + + S
Sbjct: 1 MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60
Query: 61 ------EFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINC 114
+F+ P E ++E+FR++TPTLRFES+C CK+Q ++ECSVCL+KF+ +SEIN
Sbjct: 61 STSESFDFRVCQP-ESYLEEFRNRTPTLRFESLCR-CKKQADNECSVCLSKFQGDSEINK 118
Query: 115 LPCGHLFHKACLEKWLDYWNITCPLCRTPL--MPED 148
L CGHLFHK CLEKW+DYWNITCPLCRTPL +PED
Sbjct: 119 LKCGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPED 154
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 119/156 (76%), Gaps = 10/156 (6%)
Query: 1 MGLSSLPAPSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPS 60
MGLSSLP PSEG+LC+ILVNTA+SISIVK I R+FL IVGI +S S + + S
Sbjct: 1 MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60
Query: 61 ------EFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINC 114
+F+ P E ++E+FR++TPTLRFES+C CK+Q ++ECSVCL+KF+ +SEIN
Sbjct: 61 STSESFDFRVCQP-ESYLEEFRNRTPTLRFESLCR-CKKQADNECSVCLSKFQGDSEINK 118
Query: 115 LPCGHLFHKACLEKWLDYWNITCPLCRTPL--MPED 148
L CGHLFHK CLEKW+DYWNITCPLCRTPL +PED
Sbjct: 119 LKCGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPED 154
>AT1G67856.1 | Symbols: | RING/U-box superfamily protein |
chr1:25442486-25442887 FORWARD LENGTH=133
Length = 133
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 19/148 (12%)
Query: 1 MGLSSLPAPSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPS 60
MG+S P SEGV+ ++++NT +S+S+VK + R+ +++V SS + N ++ D
Sbjct: 1 MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMV----SSETNEARNKEDDQDHE 56
Query: 61 EFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHE---CSVCLTKFEPESEINCLP- 116
+ + R + FES+C + + E E C VCL F+ E E++ L
Sbjct: 57 DSKR-----------RRRISITHFESLCENRGSRNEREAMDCCVCLCGFKEEEEVSELVS 105
Query: 117 CGHLFHKACLEKWLDYWNITCPLCRTPL 144
C H FH ACL+KW + TCPLCR+ L
Sbjct: 106 CKHYFHSACLDKWFGNNHTTCPLCRSIL 133
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 10 SEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEF-----QY 64
+E L + V T + ++ I + +G+ S E Q PD + + +
Sbjct: 8 TEVFLPKLFVQTLSILGFIRTIVFSIFRFLGL-----SDFLEMDQTWPDYTSYPTRIPET 62
Query: 65 LSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHK 123
SP + R P ++FE + +S + PE+ C+VCL +FE E EI L C H+FH+
Sbjct: 63 RSPFSALL--IREILPVIKFEELTNSGEDLPEN-CAVCLYEFEGEQEIRWLRNCRHIFHR 119
Query: 124 ACLEKWLDYWNITCPLCRTPLMPED 148
+CL++W+D+ TCPLCRTP +P++
Sbjct: 120 SCLDRWMDHDQKTCPLCRTPFVPDE 144
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPE 147
+C VCL+K + E+ L C H+FHK CLE WL + N CPLCR+PL+P
Sbjct: 73 DCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLPH 122
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 28 VKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSPSEGFIEDFRSKTPTLRFESV 87
V FR + + ++ PS N + DP+ LS S + P +RF +
Sbjct: 22 VIGFFRDMVDALCPYIGLPSFLDHNETSRSDPTRLA-LSTSATLANEL---IPVVRFSDL 77
Query: 88 CSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWL-DYWNITCPLCRTPLM 145
+ PE C+VCL+ F + +I LP CGH+FH CL++W+ D ITCP+CR +
Sbjct: 78 LT----DPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFL 133
Query: 146 PEDDASCF 153
PE+ ++ F
Sbjct: 134 PEEKSTPF 141
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
+C VCL+K + E+ L C H+FHK CLE WL +N TCPLCR+ L+ +D
Sbjct: 85 DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 1 MGLSSLPAPSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPS 60
MGL P + + + + + + I V FR + + ++ P N + PD +
Sbjct: 1 MGL-----PEDFITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLDHNETSAPDLT 55
Query: 61 EFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGH 119
LS S + P +RF S PE C+VCL+ FE + ++ LP CGH
Sbjct: 56 R-HALSTSASLANEL---IPVVRF----SDLPTDPEDCCTVCLSDFESDDKVRQLPKCGH 107
Query: 120 LFHKACLEKWL-DYWNITCPLCRTPLMPED 148
+FH CL++W+ DY + CP+CR +P++
Sbjct: 108 VFHHYCLDRWIVDYNKMKCPVCRHRFLPKE 137
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCP 138
P +F SV +C+VCL+KFEPE ++ LP C H FH C++ WL N TCP
Sbjct: 98 PIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWL-VSNQTCP 156
Query: 139 LCRTPLMPED 148
LCR+PL +
Sbjct: 157 LCRSPLFASE 166
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 29/148 (19%)
Query: 1 MGLSSLPAPSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPS 60
MGLS A +++ + +K++ R+FL I + S+ S T + P D
Sbjct: 1 MGLSYSGAG-------VIIAGVILNDFIKSV-RSFLDIRRLFGSASSGSTIIDKIPMD-- 50
Query: 61 EFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGH 119
P +FE + S + P C +C +F+ E+ CL C H
Sbjct: 51 ----------------DMLPATKFEDISS--RVNPPESCRICQDEFDGGDEVRCLRNCVH 92
Query: 120 LFHKACLEKWLDYWNITCPLCRTPLMPE 147
++HK C+++W+ +TCPLCRTP++P+
Sbjct: 93 VYHKTCIDRWIQDDKMTCPLCRTPIVPD 120
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 10 SEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSPSE 69
SE +L I + +++ + T I+G+ P S P P+ L+ +
Sbjct: 8 SELLLPKIFFYLLSFLGLIRKLISTMFKIIGLPDFLEPEPVSTSWPDPPPT----LTKPD 63
Query: 70 GFIEDFRSKTPTLRFESVCSSCKQQPEHEC-SVCLTKFEPESEINCLP-CGHLFHKACLE 127
P +RF + +PE EC +VCL FE + EI L C H+FH+ CL+
Sbjct: 64 SAAILAGEMLPVVRFSDI-----NRPESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLD 118
Query: 128 KWLDYWN-ITCPLCRTPLMPE 147
+W+ +N +TCPLCRT +P+
Sbjct: 119 RWMMGYNQMTCPLCRTQFIPD 139
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 2 GLSSLPAPSEGVLCIILVNTAMSISIVKAIFRTFL-HIVGIHVSSPSPPTENSQNPPDPS 60
G SS P+ +L I+LV+ + R L ++G+ +P+ ++ N +
Sbjct: 54 GDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPN----DAGNWLATN 109
Query: 61 EFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGH 119
Q IE F PT ++ +V + + ECSVCL +FE + + +P C H
Sbjct: 110 RQQARGLDASIIETF----PTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCH 165
Query: 120 LFHKACLEKWLDYWNITCPLCRTPLMP 146
+FH C++ WL + TCPLCR L+P
Sbjct: 166 VFHPGCIDAWL-RSHTTCPLCRADLIP 191
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 94 QPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
Q + EC +CL+ +E +E+ LPCGH FH +C++KWL Y N TCPLC+ ++ +
Sbjct: 348 QEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWL-YINATCPLCKYNILKSSN 402
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
EC +CL+ +E E+E+ LPCGH FH C++KWL Y N TCPLC+ ++
Sbjct: 324 ECCICLSAYEDETELRELPCGHHFHCGCVDKWL-YINATCPLCKYNILK 371
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWN-ITC 137
P +RF + C+VCL +FE + EI L C H+FH++CL++W+ +N +TC
Sbjct: 86 PVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQMTC 145
Query: 138 PLCRTPLMPEDDASCF 153
PLCRTP + ++ F
Sbjct: 146 PLCRTPFISDELQVAF 161
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 64 YLSPSEG-FIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLPCGHLFH 122
YL+P++ +E + P R ++V C EC +CL +F E+ LPC H FH
Sbjct: 204 YLTPAQTEAVEALIQELPKFRLKAVPDDCG-----ECLICLEEFHIGHEVRGLPCAHNFH 258
Query: 123 KACLEKWLDYWNITCPLCRTPLMPEDDASCF 153
C+++WL N+ CP CR + P+ D S
Sbjct: 259 VECIDQWLRL-NVKCPRCRCSVFPDLDLSAL 288
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 94 QPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
Q + EC +CL+ +E +E+ LPCGH FH +C++KWL Y N TCPLC+ ++ +
Sbjct: 277 QEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWL-YINATCPLCKYNILKSSN 331
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 8 APSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSP 67
+P+ V+ +IL+ + FR H G+ + SP + + L
Sbjct: 46 SPAMAVIVVILIAALFFMGFFSIYFR---HCSGVPDAGVSPAGGARSRATVNAAARGLDV 102
Query: 68 SEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACL 126
S +E F PT + V + + E EC++CL +FE + + LP C H+FH C+
Sbjct: 103 S--VVETF----PTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCI 156
Query: 127 EKWLDYWNITCPLCRTPLMPE 147
+ WL+ ++TCP+CR L +
Sbjct: 157 DAWLEA-HVTCPVCRANLAEQ 176
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCP 138
P RF S KQ E CSVCL+KFE + LP C H FH C+++WL+ + TCP
Sbjct: 108 PFFRF-SALKGLKQGLE--CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQ-HATCP 163
Query: 139 LCRTPLMPEDDASCF 153
LCR + EDD S
Sbjct: 164 LCRNRVNIEDDLSVL 178
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCP 138
P RF ++ + EC+VCL +FEP + LP C H FH C++ WLD + TCP
Sbjct: 76 PVFRFGALSG---HKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDA-HSTCP 131
Query: 139 LCRTPLMPED 148
LCR + PED
Sbjct: 132 LCRYRVDPED 141
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 44 SSPSPPTENSQNPPDPSEFQYLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCL 103
S+P T +N + + +E F P + SV S + EC++CL
Sbjct: 73 SNPDSSTRYFRNRANDGSSRRGGLDNAVVESF----PVFAYSSVKESKIGSKDLECAICL 128
Query: 104 TKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
+ E + LP C HLFH C++ WL Y + TCP+CR+ L + +
Sbjct: 129 NELEDHETVRLLPICNHLFHIDCIDTWL-YSHATCPVCRSNLTAKSN 174
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
Query: 99 CSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYW--------NITCPLCRTPLMP 146
C+VCL E E EI L C H+FH+ C+++WLDY + TCPLCRTPL+P
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLLP 139
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCP 138
P RF S KQ + CSVCL+KFE + LP C H FH C+++WL+ + TCP
Sbjct: 107 PLFRF-SALKGSKQGLD--CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQ-HATCP 162
Query: 139 LCRTPLMPEDDASCF 153
LCR + E+D+S
Sbjct: 163 LCRDRVSMEEDSSVL 177
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
+C +CL ++E I LPC H FHK C++KWL + CPLCR + D
Sbjct: 489 QCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICRHD 539
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 93 QQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
+ P ECSVCL++FE + E LP CGH+FH C++ W + +CPLCR P+ P
Sbjct: 107 ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRS-SCPLCRAPVQP 160
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 8 APSEGVLCIILVNTAMSISIVKAIFRTFL-HIVGIHVSSPSPPTENSQNPPDPSEFQYLS 66
+P+ ++ I+LV+ ++ + R L H +G+ N + +P L
Sbjct: 36 SPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEPG----LD 91
Query: 67 PSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKAC 125
S IE F PT + +V + + EC VCL +FE + + +P C H+FH C
Sbjct: 92 AS--VIETF----PTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGC 145
Query: 126 LEKWLDYWNITCPLCRTPLMP 146
++ WL TCPLCR L+P
Sbjct: 146 IDAWLRS-QTTCPLCRANLVP 165
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 97 HECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
++C+VC+ +FE S++ +PC H+FH+ CL WL+ N +CP+CR L P DD
Sbjct: 214 NQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHN-SCPVCRFEL-PTDD 264
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 65 LSPSE-GFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFH 122
LS +E G +D R P + ++ + Q CSVCL ++ E ++ +P CGH FH
Sbjct: 66 LSTAELGLSKDIREMLPIVIYKESFTVNDTQ----CSVCLGDYQAEEKLQQMPSCGHTFH 121
Query: 123 KACLEKWLDYWNITCPLCRTPLMPE 147
C++ WL + TCPLCR L+P+
Sbjct: 122 MECIDLWLTS-HTTCPLCRLSLIPK 145
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDDAS 151
+ C +CLT++ + ++ LPC H+FH C++KWL N TCPLC+ + AS
Sbjct: 352 DASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKI-NATCPLCKNEVGESSSAS 406
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 97 HECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRT 142
ECSVCL++F+ E ++ +P C HLFH C++ WL N CPLCRT
Sbjct: 136 QECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQN-NANCPLCRT 181
>AT1G24580.1 | Symbols: | RING/U-box superfamily protein |
chr1:8710232-8710573 FORWARD LENGTH=113
Length = 113
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 19 VNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSPSEGFIEDFRSK 78
+NT +SI+++K + R+ IV + TE+S D E +DF ++
Sbjct: 1 MNTVVSITLLKNMVRSVFQIV-------ASETESSMEIDDEPE-----------DDFVTR 42
Query: 79 TPTL-RFESVCSSCKQQPEH---ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYW 133
++ +F+S+C + +++ E EC VCL F+ E E++ L C H FH+ACL+ W
Sbjct: 43 RISITQFKSLCENIEEEEEEKGVECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNN 102
Query: 134 NITCPLCRTPL 144
+ TCPLCR+ L
Sbjct: 103 HTTCPLCRSIL 113
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 15/69 (21%)
Query: 99 CSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYW--------------NITCPLCRTP 143
C+VCL E E+ L C H+FH+ C+++WLDY + TCPLCRTP
Sbjct: 82 CAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLCRTP 141
Query: 144 LMPEDDASC 152
L+ + SC
Sbjct: 142 LLAANTTSC 150
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 99 CSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
CSVCL++FE E E LP CGH FH C++ W + TCPLCR P+ P
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRS-TCPLCRAPVQP 155
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 92 KQQPEH--ECSVCLTKFEPESEINCLPCGHLFHKACLEKWL-DYWNITCPLCRTPLMPED 148
K Q E +C +CL ++E I LPC H FHK C++KWL + + CPLCR + D
Sbjct: 481 KSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDICRHD 540
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 99 CSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
C +CL K+ E+ LPC H FHK C++KWL N +CPLC++ + ++
Sbjct: 363 CCICLAKYANNEELRELPCSHFFHKECVDKWLKI-NASCPLCKSEVGEKN 411
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDDAS 151
+ ECS+CL +E E+ LPC H FH C++KWL N TCPLC+ ++ + S
Sbjct: 320 DAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRI-NATCPLCKFNILKNGEPS 374
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 93 QQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
+Q +C +CL+ FE + +P CGH+FH C++ WL + +TCPLCR+ + D
Sbjct: 134 KQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSY-VTCPLCRSNQLFSD 189
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 66 SPSEGFIEDFRSKTPTLRFESVCSSCKQQPEH----ECSVCLTKFEPESEINCLP-CGHL 120
SP++G + P F + S+ E EC++CLT F EI LP CGH
Sbjct: 65 SPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHS 124
Query: 121 FHKACLEKWLDYWNITCPLCRTPLMP 146
FH C++KWL +CP CR L P
Sbjct: 125 FHVECIDKWL-VSRSSCPSCRRILTP 149
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 96 EHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMPE 147
+ +CSVCL ++ E ++ +P CGH FH C++ WL + TCPLCR L+P+
Sbjct: 108 DSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTS-HTTCPLCRLSLIPK 159
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCP 138
PT + V + + EC++CL +FE + + LP C H+FH C+ WL ++TCP
Sbjct: 105 PTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQ-GHVTCP 163
Query: 139 LCRTPLMPE 147
+CRT L +
Sbjct: 164 VCRTNLAEQ 172
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 68 SEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACL 126
S G +D + P+ + V + EC++CL +FE E + +P C H FH +C+
Sbjct: 97 SRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCI 156
Query: 127 EKWLDYWNITCPLCRTPLMPE 147
+ WL + TCP+CR L P+
Sbjct: 157 DVWLSSRS-TCPVCRASLPPK 176
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
E EC +CL +++ E + +PC H FH C+EKWL + +CP+CR MP D
Sbjct: 110 EGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHG-SCPVCRYE-MPVD 160
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 89 SSCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPL 144
S C E C+VC FE E+E +PC HLFH C+ WL N +CP+CR L
Sbjct: 189 SDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRN-SCPVCRFEL 243
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 76 RSKTPTLRFESV--CSSCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYW 133
R TP + E+V ++ K + +CSVCL FE +E +PC H FH CL WL+
Sbjct: 198 RYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLEL- 256
Query: 134 NITCPLCRTPLMPEDDA 150
+ +CP+CR L P D+A
Sbjct: 257 HSSCPVCRYQL-PADEA 272
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 52 NSQNPPDPSEFQYLS------PSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTK 105
SQ S F+ LS S+G D K P ++ + + CSVCL
Sbjct: 138 QSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQD 197
Query: 106 FEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPL 144
F+ + LP C H+FH C++ WL + + +CP+CR L
Sbjct: 198 FQLGETVRSLPHCHHMFHLPCIDNWL-FRHGSCPMCRRDL 236
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 21/125 (16%)
Query: 42 HVSSPSP----PTENSQNPPDPSEFQYLSP--------SEGFIEDFRSKTPTLRFES--- 86
H SPS PT++ N P+ ++ L+ +G ++ S+ T ++ +
Sbjct: 157 HTHSPSSISHNPTDDENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTK 216
Query: 87 --VCSSCKQQ---PEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCR 141
C K++ + +CS+CL ++ +I LPC H++HK C+ +WL N C +C+
Sbjct: 217 SWYCLHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLK-QNKVCCICK 275
Query: 142 TPLMP 146
+ P
Sbjct: 276 AEVYP 280
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
+ +C +CL+ +E +E+ LPC H FH C+ KWL N TCPLC+ ++ ++
Sbjct: 289 DADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKM-NATCPLCKFNILKGNE 341
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 72 IEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWL 130
IE F PT + V + EC++CL++FE + + +P C H FH C++ WL
Sbjct: 100 IESF----PTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWL 155
Query: 131 DYWNITCPLCRTPL 144
W+ TCP+CR L
Sbjct: 156 SSWS-TCPVCRANL 168
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPL 139
P++ F C+ C++CL + ++ LPC H FH AC++ WL W CP+
Sbjct: 215 PSVTF--TCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPV 272
Query: 140 CR 141
C+
Sbjct: 273 CK 274
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 13 VLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSP-----PTENSQNPPDPSEFQYLSP 67
VLC+++ A+ I + ++ F + P P P S + P +L
Sbjct: 119 VLCLVISGLALIIVFLGVLYLIFKFLRKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFLHD 178
Query: 68 SEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACL 126
S G + P + +V S +Q +C+VCL +F ++ LP C H FH C+
Sbjct: 179 S-GLDQTAIDALPVFLYGNVTISLEQ--PFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCI 235
Query: 127 EKWLDYWNITCPLCRTPL 144
+ WL N TCPLCR L
Sbjct: 236 DTWL-LSNSTCPLCRRSL 252
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 92 KQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRT 142
+++ E C +CL +FE E + LP C HLFH C+E WL ++TCPLCR+
Sbjct: 55 EKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRS 106
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 70 GFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEK 128
G ++ R P + F+ + Q CSVCL ++P ++ +P C H FH C++
Sbjct: 75 GLSKELREMLPIVVFKESFTVMDSQ----CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDL 130
Query: 129 WLDYWNITCPLCRTPLMP 146
WL + TCPLCR L+P
Sbjct: 131 WLT-SHTTCPLCRLALIP 147
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 90 SCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPE 147
S + C++CL + + LPC H FH C++ WL W +CP+C+ + E
Sbjct: 223 SAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCR 141
+C+VCL +F E E+ LP C H FH C++ WL N TCPLCR
Sbjct: 121 DCAVCLREFTAEDELRLLPKCSHAFHVECIDTWL-LTNSTCPLCR 164
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 67 PSEGFIEDFRSKT-PTLRFESVCSS--CKQQPEHECSVCLTKFEPESEINCLPCGHLFHK 123
P E +++T + FE SS K C++C F+ E +I L CGH +H
Sbjct: 407 PEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHA 466
Query: 124 ACLEKWLDYWNITCPLCRT 142
CLEKWL N+ CP+C++
Sbjct: 467 ECLEKWLIVKNV-CPICKS 484
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 67 PSEGFIEDFRSKT-PTLRFESVCSS--CKQQPEHECSVCLTKFEPESEINCLPCGHLFHK 123
P E +++T + FE SS K C++C F+ E +I L CGH +H
Sbjct: 407 PEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHA 466
Query: 124 ACLEKWLDYWNITCPLCRT 142
CLEKWL N+ CP+C++
Sbjct: 467 ECLEKWLIVKNV-CPICKS 484
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 90 SCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPE 147
S + C++CL + + LPC H FH C++ WL W +CP+C+ + E
Sbjct: 223 SAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 94 QPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPL 144
+ + +C++CL +F+ + LPC H FH CL WLD N+ CP CRT +
Sbjct: 145 REQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDT-NVYCPYCRTDI 194
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLM 145
+ +C +CL+ +E +E++ LPC H FH C+ KWL TCPLC+ ++
Sbjct: 304 DADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKM-RATCPLCKYNIL 352
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLM 145
ECSVCL +FE + + LP C H FH C++ WL + CPLCR P++
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL-LSHKNCPLCRAPVL 181
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 13 VLCIILVNTAMSI-SIVKAIFRTFLHIVGIHVSSPSPPTENSQNP--PDPSEFQ------ 63
+ I+L++ I SI+ + R +L ++SS P E++QNP D +Q
Sbjct: 54 LFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSS--PNESNQNPEFSDSDTYQRQLQQL 111
Query: 64 YLSPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFH 122
+ G + P ++ + + ++P +C+VCL +F + ++ LP C H FH
Sbjct: 112 FHLHDSGLDQALIDALPVFLYKEIKGT--KEP-FDCAVCLCEFSEDDKLRLLPNCSHAFH 168
Query: 123 KACLEKWLDYWNITCPLCRTPLM 145
C++ WL N TCPLCR L
Sbjct: 169 IDCIDTWL-LSNSTCPLCRGTLF 190
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 68 SEGFIEDFRSKTPTLRFE--SVCSSCKQQPEH--ECSVCLTKFEPESEINCLP-CGHLFH 122
+ G E P +F+ V + + Q ++ ECSVCL +F+ + ++ +P C H+FH
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 123 KACLEKWLDYWNITCPLCRTPL 144
C++ WL N CPLCRT +
Sbjct: 159 IDCIDIWLQ-GNANCPLCRTSV 179
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
EC++C+T+F EI LP C H FH AC++KWL + +CP CR L+P
Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRS-SCPSCRRILVP 160
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 99 CSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCR 141
C++CL + ++ LPC H FH AC++ WL W CP+C+
Sbjct: 232 CAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCK 274
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDDA 150
+CS+CL F+ SE +PC H FH C+ WL+ + +CP+CR L P+D+
Sbjct: 240 QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHS-SCPVCRYELPPDDET 291
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDDA 150
+CS+CL F+ SE +PC H FH C+ WL+ + +CP+CR L P+D+
Sbjct: 240 QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHS-SCPVCRYELPPDDET 291
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 66 SPSEGFIEDFRSKTPTLRFESV---CSSCKQQPEHECSVCLTKFEPESEINCLPCGHLFH 122
S +G +D S P+ +++ + S + + EC +CL K++ + E+ LPC H FH
Sbjct: 253 SSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFH 312
Query: 123 KACLEKWLDYWNITCPLCRTPL 144
C+++WL + CPLC+ L
Sbjct: 313 LKCVDQWLRIIS-CCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 66 SPSEGFIEDFRSKTPTLRFESV---CSSCKQQPEHECSVCLTKFEPESEINCLPCGHLFH 122
S +G +D S P+ +++ + S + + EC +CL K++ + E+ LPC H FH
Sbjct: 253 SSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFH 312
Query: 123 KACLEKWLDYWNITCPLCRTPL 144
C+++WL + CPLC+ L
Sbjct: 313 LKCVDQWLRIIS-CCPLCKQDL 333
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLM 145
+CSVCL++FE E + LP C H FH C++ WL + CPLCR P++
Sbjct: 216 DCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRS-HTNCPLCRAPIV 263
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 70 GFIEDFRSKTPTLRFESVCSSCKQQPEHE----CSVCLTKFEPESEINCLP-CGHLFHKA 124
G E+ P L +E S Q E CS+CL ++ I LP C HLFH
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDN 155
Query: 125 CLEKWLDYWNITCPLCRTPLMP 146
C++ WL + TCP+CRT +P
Sbjct: 156 CVDPWL-RLHPTCPVCRTSPLP 176
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 13 VLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSPSEGFI 72
VL +I V+ + + + A RT + G SP PP + ++G
Sbjct: 44 VLGLIAVSRCVWLRRLAAGNRT---VSGSQTQSPQPPVA--------------AANKGLK 86
Query: 73 EDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLD 131
+ P L F S + + EC++CL +F E+ LP CGH FH AC++ WL
Sbjct: 87 KKVLQSLPKLTFSP--ESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLG 144
Query: 132 YWNITCPLCRTPLM 145
+ +CP CR L+
Sbjct: 145 SHS-SCPSCRQILV 157
>AT2G20650.2 | Symbols: | RING/U-box superfamily protein |
chr2:8903954-8907017 REVERSE LENGTH=559
Length = 559
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 97 HECSVCLTKFEPESEIN-CL--PCGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
+C +C+T + IN C+ PC H+FH CL++W+D + CP CR PL P
Sbjct: 507 RDCVICMTTIDLRHRINDCMVTPCEHIFHSGCLQRWMDI-KMECPTCRRPLPP 558
>AT2G20650.1 | Symbols: | RING/U-box superfamily protein |
chr2:8903954-8907017 REVERSE LENGTH=559
Length = 559
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 97 HECSVCLTKFEPESEIN-CL--PCGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
+C +C+T + IN C+ PC H+FH CL++W+D + CP CR PL P
Sbjct: 507 RDCVICMTTIDLRHRINDCMVTPCEHIFHSGCLQRWMDI-KMECPTCRRPLPP 558
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 12 GVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSPSEGF 71
VL I++++ + + A R FL P+ TE+ P DP +P+
Sbjct: 41 SVLLILVISALICALSLYAAIRCFLR--------PTLETEDDHKP-DPEAAASSTPT--- 88
Query: 72 IEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCL-PCGHLFHKACLEKWL 130
TPTL + S E EC++CL++FE I L C H FH C+ KWL
Sbjct: 89 -------TPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWL 139
Query: 131 DYWNITCPLCRTPLMPE 147
+ +CP CRT + +
Sbjct: 140 STRS-SCPTCRTSIFSQ 155
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCR 141
+ +CS+C ++E E E+ L CGH FH C+++WL N CP+C+
Sbjct: 317 DRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKN-ACPVCK 361
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 70 GFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEK 128
G + F P ++S+ K P +C+VCL +FE E ++ LP C H FH C++
Sbjct: 107 GVDQSFIDTLPVFHYKSIIG-LKNYP-FDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 129 WLDYWNITCPLCR 141
WL + TCPLCR
Sbjct: 165 WL-LSHSTCPLCR 176
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 89 SSCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPL 144
S C + E C+VC FE E +PC H+FH C+ WL N +CP+CR L
Sbjct: 205 SDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRN-SCPVCRFEL 259
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
E++C++C +F+ E+ L CGH F C+ +W CPLCR L EDD
Sbjct: 169 EYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKV-RYNCPLCRFELPREDD 221
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 51 ENSQNPPDPSEFQY------LSPSEGFIEDFRSKTPTLRFESVCSSCKQQPE-HECSVCL 103
N Q S+FQ + S+G D ++ P +R PE CSVCL
Sbjct: 151 NNKQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDT------SPEIVSCSVCL 204
Query: 104 TKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPL 144
F+ + LP C H+FH C++KWL + +CPLCR L
Sbjct: 205 QDFQVGETVRSLPHCHHMFHLPCIDKWLRR-HASCPLCRRHL 245
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 93 QQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCR 141
++ + CSVCL FEP+ + PC H+FH+ C+ WL CP+CR
Sbjct: 138 EEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKG-QCPVCR 185
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 93 QQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCR 141
++ + CSVCL FEP+ + PC H+FH+ C+ WL CP+CR
Sbjct: 166 EEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKG-QCPVCR 213
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 76 RSKTPTLRFESVCS--SCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYW 133
R TP R E+V + + K +CSVCL FE +E +PC H FH C+ WL+
Sbjct: 234 RQGTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLEL- 292
Query: 134 NITCPLCRTPL 144
+ +CP+CR L
Sbjct: 293 HSSCPVCRFEL 303
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 73 EDFRS----KTPTLRFESVCSSCKQQ-----PEHECS---VCLTKFEPESEINCLPCGHL 120
E FR+ T LR+ + S+ + PE S C+ E + L CGHL
Sbjct: 251 ETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHL 310
Query: 121 FHKACLEKWLDYWNITCPLCRTPLMPEDDAS 151
FH CL WL+ N TCP CR ++P ++A+
Sbjct: 311 FHVHCLRSWLERQN-TCPTCRALVVPAENAT 340
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 52 NSQNPPDPSEFQY------LSPSEGFIEDFRSKTPTLRFESVCSSCKQQPE-HECSVCLT 104
SQ S+FQ + S+G D ++ P +R PE CSVCL
Sbjct: 128 QSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRI------TDTSPEIVSCSVCLQ 181
Query: 105 KFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPL 144
F+ + LP C H+FH C++KWL + +CPLCR L
Sbjct: 182 DFQVGETVRSLPHCHHMFHLPCIDKWLRR-HASCPLCRRHL 221
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 66 SPSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKA 124
S+G D K P + ++ + CSVCL F+ + LP C H+FH
Sbjct: 163 GGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLP 222
Query: 125 CLEKWLDYWNITCPLCRTPL 144
C++ WL + +CP+CR +
Sbjct: 223 CIDNWL-LRHGSCPMCRRDI 241
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLM 145
+C VCL +FE E ++ LP C H FH C++ WL + TCPLCR+ L+
Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL-LSHSTCPLCRSNLL 172
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 73 EDFRS----KTPTLRFESVCSSCKQQ-----PEHECS---VCLTKFEPESEINCLPCGHL 120
E FR+ T LR+ + S+ + PE S C+ E + L CGHL
Sbjct: 180 ETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHL 239
Query: 121 FHKACLEKWLDYWNITCPLCRTPLMPEDDAS 151
FH CL WL+ N TCP CR ++P ++A+
Sbjct: 240 FHVHCLRSWLERQN-TCPTCRALVVPAENAT 269
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPL 144
EC +CL K++ + E+ LPC H FH C+++WL + CPLC+ L
Sbjct: 296 ECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIIS-CCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPL 144
EC +CL K++ + E+ LPC H FH C+++WL + CPLC+ L
Sbjct: 296 ECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIIS-CCPLCKQDL 341
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCP 138
PT + V + + EC+VCL +FE + + +P C H+FH C++ WL + TCP
Sbjct: 116 PTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS-TCP 174
Query: 139 LCRTPLM----PEDDAS 151
LCR L+ +DD S
Sbjct: 175 LCRADLVLNQQGDDDDS 191
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 91 CKQQ---PEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRT 142
C+Q + +C +C ++E + E+ L CGH FH C+ +WL N +CP+C+T
Sbjct: 308 CRQDTTVADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKN-SCPVCKT 361
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 99 CSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
CS+CL +F+ I LPCGH F C KW + N CPLCR L ED
Sbjct: 244 CSICLEEFDDGRSIVALPCGHEFDDECALKWFET-NHDCPLCRFKLPCED 292
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 78 KTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITC 137
+ PT F +C C +CL +E ++ LPC H FH AC++ WL C
Sbjct: 215 RMPTTIFNGICDEATTSIL--CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFC 272
Query: 138 PLCR 141
P+C+
Sbjct: 273 PVCK 276
>AT5G51450.2 | Symbols: RIN3 | RPM1 interacting protein 3 |
chr5:20893164-20897223 FORWARD LENGTH=595
Length = 595
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYW---NITCPLCRTPL 144
+ EC++C EP ++ L C HLFH CL WLD +CP CR PL
Sbjct: 334 DDECAICR---EPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPL 382
>AT4G25230.2 | Symbols: RIN2 | RPM1 interacting protein 2 |
chr4:12924446-12928671 FORWARD LENGTH=578
Length = 578
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYW---NITCPLCRTPL 144
+ EC++C EP ++ L C HLFH CL WLD +CP CR PL
Sbjct: 334 DDECAICR---EPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPL 382
>AT4G25230.1 | Symbols: RIN2 | RPM1 interacting protein 2 |
chr4:12924446-12928671 FORWARD LENGTH=578
Length = 578
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYW---NITCPLCRTPL 144
+ EC++C EP ++ L C HLFH CL WLD +CP CR PL
Sbjct: 334 DDECAICR---EPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPL 382
>AT5G51450.1 | Symbols: RIN3 | RPM1 interacting protein 3 |
chr5:20893164-20897223 FORWARD LENGTH=577
Length = 577
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYW---NITCPLCRTPL 144
+ EC++C EP ++ L C HLFH CL WLD +CP CR PL
Sbjct: 334 DDECAICR---EPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPL 382
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 80 PTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCL--PCGHLFHKACLEKWLDYWNITC 137
P F SV + + EC++CL +FE E + L C H+FH+ C+++WL+ N TC
Sbjct: 95 PLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLE-SNKTC 153
Query: 138 PLCRTPLMP 146
P+CR L P
Sbjct: 154 PVCRRNLDP 162
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 96 EHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLM 145
+ EC +CL ++E E+ LPC H FH C++KWL + N CPLC+ ++
Sbjct: 335 DAECCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCKFNIL 383
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 79 TPTLRFESVCSSCKQQ-----PEHECS---VCLTKFEPESEINCLPCGHLFHKACLEKWL 130
T LR+ + S+ + PE S C+ E + L CGHLFH CL WL
Sbjct: 82 TDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWL 141
Query: 131 DYWNITCPLCRTPLMPEDDAS 151
+ N TCP CR ++P ++A+
Sbjct: 142 ERQN-TCPTCRALVVPAENAT 161
>AT5G25560.3 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901391 FORWARD LENGTH=318
Length = 318
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 97 HECSVCLT-KFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLC 140
H+C +C FE +++ LPCGH H+ CLE+ D++ CPLC
Sbjct: 207 HDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLC 251
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 96 EHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
E EC VCL +F+ + + +P C H+FH C++ WL + + TCP+CR ++P
Sbjct: 82 ELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSS-TCPICRAKVVP 132
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 90 SCKQQPEHECSVCLTKFEPESEINCL-PCGHLFHKACLEKWLDYWNITCPLCRTPLMPED 148
S K +CS+CLT+F + I + C H FH C++ W + + TCP+CR L ED
Sbjct: 145 SVKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFE-GHKTCPVCRRELDVED 203
Query: 149 DAS 151
S
Sbjct: 204 RTS 206
>AT5G25560.2 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901453 FORWARD LENGTH=328
Length = 328
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 97 HECSVCLT-KFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLC 140
H+C +C FE +++ LPCGH H+ CLE+ D++ CPLC
Sbjct: 197 HDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLC 241
>AT5G25560.4 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901391 FORWARD LENGTH=303
Length = 303
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 97 HECSVCLT-KFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLC 140
H+C +C FE +++ LPCGH H+ CLE+ D++ CPLC
Sbjct: 192 HDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLC 236
>AT5G25560.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901391 FORWARD LENGTH=308
Length = 308
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 97 HECSVCLT-KFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLC 140
H+C +C FE +++ LPCGH H+ CLE+ D++ CPLC
Sbjct: 197 HDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLC 241
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLMP 146
EC+VCL+ E + LP C H+FH +C++ WL + TCP+CRT P
Sbjct: 99 ECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQS-TCPVCRTEAEP 147
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 13 VLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYLSPSEGFI 72
+LC I+ + + I A R+ ++ +S PS P ++S N + + P +
Sbjct: 59 LLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPVVNY- 117
Query: 73 EDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLD 131
+P + V EC +CL+ F ++ LP C H FH C++KWL
Sbjct: 118 ------SPEINLPGV--------GEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWL- 162
Query: 132 YWNITCPLCR 141
++TCP CR
Sbjct: 163 TQHMTCPKCR 172
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 9 PSEGVLCIILVNTAMSISIVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQYL--S 66
P +L + LV M +IF FL ++GI P +S + +
Sbjct: 25 PKTRILSLFLVGVIMF-----SIFFLFLVLIGIASVLILPLLLSSLHRHHRRRRRNRRQE 79
Query: 67 PSEGFIEDFRSKTPTLRFESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKAC 125
S+G F K P +F S + E +C VC F LP CGH+FH+ C
Sbjct: 80 SSDGLSSRFVKKLPQFKFSE--PSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKC 137
Query: 126 LEKWLDYWNITCPLCRTPL-MPEDD 149
++ WL + TCP+CR + + E+D
Sbjct: 138 VDTWLLKAS-TCPICRARVRLWEED 161
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 94 QPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLM 145
Q +C+VCL +F + ++ LP C H FH C++ WL N TCPLCR L
Sbjct: 138 QEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQS-NSTCPLCRGTLF 189
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 27 IVKAIFRTFLHIVGIHVSSPSPPTENSQNPPDPSEFQY---LSPSEGFIEDFRSKTPTLR 83
I+ AIF L V +S ++ S NP S+ + ++ G E + PT
Sbjct: 21 ILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRGLDEAIINSFPTFL 80
Query: 84 FESVCSSCKQQPEHECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRT 142
+ V EC+VC+ +FE + +P C H+FH C+ WL + TCPLCR
Sbjct: 81 YSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSD-HSTCPLCRV 139
Query: 143 PL 144
L
Sbjct: 140 DL 141
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 45 SPSPPTENSQNPPDPSEFQY----------LSPSEGFIEDFRSKTPTLRFESVCSSCKQQ 94
P P + Q+ DP Y + S G ++ PT +++ +++
Sbjct: 133 DPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKR 192
Query: 95 PEHECSVCLTKFE-PESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPE 147
C +C K++ E ++N LPC H++H C+ KWL N CP+C + + E
Sbjct: 193 AGERCVICQLKYKIGERQMN-LPCKHVYHSECISKWLSI-NKVCPVCNSEVFGE 244
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 45 SPSPPTENSQNPPDPSEFQY----------LSPSEGFIEDFRSKTPTLRFESVCSSCKQQ 94
P P + Q+ DP Y + S G ++ PT +++ +++
Sbjct: 133 DPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKR 192
Query: 95 PEHECSVCLTKFE-PESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPE 147
C +C K++ E ++N LPC H++H C+ KWL N CP+C + + E
Sbjct: 193 AGERCVICQLKYKIGERQMN-LPCKHVYHSECISKWLSI-NKVCPVCNSEVFGE 244
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 98 ECSVCLTKFEPESEINCLP-CGHLFHKACLEKWLDYWNITCPLCRTPLM 145
EC++CLT+F E+ LP CGH FH +C++ WL + +CP CR L+
Sbjct: 103 ECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHS-SCPSCRQILV 150
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 46.2 bits (108), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 94 QPEHECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRT 142
Q C VC ++ ++ L CGH FH C+++WL N+ CP+C+T
Sbjct: 632 QDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNL-CPICKT 679
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
+CSVCL FE E +PC H FH CL WL+ + +CP+CR L DD
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHS-SCPVCRYLLPTGDD 274
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
+CSVCL FE E +PC H FH CL WL+ + +CP+CR L DD
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHS-SCPVCRYLLPTGDD 274
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 98 ECSVCLTKFEPESEINCLPCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDD 149
+CSVCL FE E +PC H FH CL WL+ + +CP+CR L DD
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHS-SCPVCRYLLPTGDD 274