Miyakogusa Predicted Gene

Lj0g3v0050159.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LFT5_MEDTR 516 65.3 75.4 (tr|G7LFT5) Nucleosome/chromatin assembly factor group OS=Medicago truncatula GN=MTR_8g095210 PE=4 SV=1
TAIR_pep AT5G08630.1 359 46.9 61.2 | Symbols: | DDT domain-containing protein | chr5:2798575-2802138 REVERSE LENGTH=723
Medicago Medtr8g095210.1 516 65.3 75.4 | nucleosome/chromatin assembly factor group protein, putative | HC | chr8:39816547-39824398 | 20130731
Soybean Glyma08g00730.1 459 60.2 68.6  
LJGI gnl|LJGI|TC80481 1088 98.5 98.5 weakly similar to UniRef100_A7PKL3 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0050159.1 length: 402 aa.
IPR004022 DDT domain
method AccNumber shortName E-value location
HMMPfam PF02791 DDT 7.5e-19 3-61
IPR018500 DDT domain, subgroup
HMMSmart SM00571 domain 7.3e-17 1-62
IPR018501 DDT domain superfamily
ProfileScan PS50827 DDT 15.907 1-62
no_ID  
Coil coil coiled-coil NA 149-174
HMMPanther PTHR15546 FAMILY 1.8e-125 1-383
HMMPanther PTHR15546:SF2 SUBFAMILY 1.8e-125 1-383
Seg seg seg NA 143-172
Wolf-PSORT
Lj0g3v0050159.1	nucl 12, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0050159.1 Not targeted -57.260 -2.689 -10.560 85.55% -44.012