hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /data/Pfam.bin
Sequence file: /tmp/20090424/iprscan-20090424-21525634/chunk_1/iprscan-20090424-21525634.nocrc
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Query sequence: pF1KE0942
Accession: [none]
Description: [none]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
PF07714.7.fs Protein tyrosine kinase 10.7 0.0052 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PF07714.7.fs 1/1 6 24 .. 60 79 .. 10.7 0.0052
Alignments of top-scoring domains:
PF07714.7.fs: domain 1 of 1, from 6 to 24: score 10.7, E = 0.0052
*->klGdHpNiVrLlGvctkege<-*
+l +HpN+++L+G c++++e
pF1KE0942 6 RL-RHPNVLQLYGYCYQDSE 24
//