hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090425/iprscan-20090425-14005423/chunk_1/iprscan-20090425-14005423.nocrc
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Query sequence: pF1KB6951
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02197.7.ls Regulatory subunit of type II PKA R-subunit     17.1     0.0022   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02197.7.ls   1/1      12    49 ..     1    39 []    17.1   0.0022

Alignments of top-scoring domains:
PF02197.7.ls: domain 1 of 1, from 12 to 49: score 17.1, E = 0.0022
                   *->hglqaLLedltveVlraqPsDlvqFaadYFnekLeeqRa<-*
                      ++l+  L++++ +  r qP Dl q aadYF e L + +    
   pF1KB6951    12    PELPKMLKEFAKAAIRVQPQDLIQWAADYF-EALSRGET    49   

//