hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090425/iprscan-20090425-13425948/chunk_1/iprscan-20090425-13425948.nocrc
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Query sequence: pF1KB6944
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00657.12.fs GDSL-like Lipase/Acylhydrolase               18.2    2.2e-05   1
PF00657.12.ls GDSL-like Lipase/Acylhydrolase               19.6    4.1e-05   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00657.12.fs   1/1      41   208 ..     1   367 []    18.2  2.2e-05
PF00657.12.ls   1/1      41   208 ..     1   367 []    19.6  4.1e-05

Alignments of top-scoring domains:
PF00657.12.fs: domain 1 of 1, from 41 to 208: score 18.2, E = 2.2e-05
                   *->ivafGDSlTdgggayygdsdgggwgagladrltallrlrargrgvdv
                      +v++GDSl++            + ++ ++ ++          +++  
   pF1KB6944    41    VVFIGDSLVQL----------MHQCEIWRELF----------SPLHA 67   

                   fnrgisGrtsdgrlvvDarlvatllFlaqflGlflpPYLdsgdfrGANFA
                    n gi+G++                                         
   pF1KB6944    68 LNFGIGGDG----------------------------------------- 76   

                   sagatilgtsispfliQvqFkdfkskvlelrqalgllqellrlvpvldak
                                                ++++l      ++   +l   
   pF1KB6944    77 -----------------------------TQHVL-----WRLENGELEHI 92   

                   kpdlvtimiGtNDlitvakfgpkstksdrnvsvpefrknlrklikrLrsa
                    p++v++++GtN                  +++++++  ++ +++++ ++
   pF1KB6944    93 RPKIVVVWVGTNNH---------------GHTAEQVTGGIKAIVQLVNER 127  

                   ngariiilitlvllnlpldplGClpqklalalassknvdatgclerlnea
                    ++ ++++++l++ ++                           ++ l+e 
   pF1KB6944   128 QPQARVVVLGLLPRGQH--------------------------PNPLREK 151  

                   vadynealrelaeieklqaqlrkdglpdlkeanvpyvDlysifqdldgiq
                   + + ne++r+ +                    + +++D  + f     + 
   pF1KB6944   152 NRQVNELVRAAL-------------AG---HPRAHFLDADPGFVHS--DG 183  

                   npsayvyGFeetkaCCGyGgryNynrvCGnaglgkvtakaCdassyllat
                     s++                                             
   pF1KB6944   184 TISHH--------------------------------------------- 188  

                   lfwDglHpsekGykavAeal<-*
                   ++ D lH+s  Gy  v  al   
   pF1KB6944   189 DMYDYLHLSRLGYTPVCRAL    208  

PF00657.12.ls: domain 1 of 1, from 41 to 208: score 19.6, E = 4.1e-05
                   *->ivafGDSlTdgggayygdsdgggwgagladrltallrlrargrgvdv
                      +v++GDSl++            + ++ ++ ++          +++  
   pF1KB6944    41    VVFIGDSLVQL----------MHQCEIWRELF----------SPLHA 67   

                   fnrgisGrtsdgrlvvDarlvatllFlaqflGlflpPYLdsgdfrGANFA
                    n gi+G++                                         
   pF1KB6944    68 LNFGIGGDG----------------------------------------- 76   

                   sagatilgtsispfliQvqFkdfkskvlelrqalgllqellrlvpvldak
                                                ++++l      ++   +l   
   pF1KB6944    77 -----------------------------TQHVL-----WRLENGELEHI 92   

                   kpdlvtimiGtNDlitvakfgpkstksdrnvsvpefrknlrklikrLrsa
                    p++v++++GtN                  +++++++  ++ +++++ ++
   pF1KB6944    93 RPKIVVVWVGTNNH---------------GHTAEQVTGGIKAIVQLVNER 127  

                   ngariiilitlvllnlpldplGClpqklalalassknvdatgclerlnea
                    ++ ++++++l++ ++                           ++ l+e 
   pF1KB6944   128 QPQARVVVLGLLPRGQH--------------------------PNPLREK 151  

                   vadynealrelaeieklqaqlrkdglpdlkeanvpyvDlysifqdldgiq
                   + + ne++r+ +                    + +++D  + f     + 
   pF1KB6944   152 NRQVNELVRAAL-------------AG---HPRAHFLDADPGFVHS--DG 183  

                   npsayvyGFeetkaCCGyGgryNynrvCGnaglgkvtakaCdassyllat
                     s++                                             
   pF1KB6944   184 TISHH--------------------------------------------- 188  

                   lfwDglHpsekGykavAeal<-*
                   ++ D lH+s  Gy  v  al   
   pF1KB6944   189 DMYDYLHLSRLGYTPVCRAL    208  

//