RAB11FIP5 ORF clone pFN21ASDA0857

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21ASDA0857

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Clone info.

Species

human

Clone Name

pFN21ASDA0857 Sequence (with vector) Restriction Map

Product ID

FHC00661

Flexi Clone PID

FXC00661

ORF Sequence

DNA sequence (1959 bp)
Protein sequence (653 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384018]

Gene

KIAA0857

Symbol

RAB11FIP5

Alias : GAF1, RIP11, gaf-1, pp75, rab11-FIP5

Description

RAB11 family interacting protein 5 (class I)

Original Clone ID

hk06227

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1959 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 653 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1923.1 2.7e-199 100.0 RAB11FIP5 CCDS34881.1 1.2e-25 36.2 RAB11FIP1 CCDS34882.1 2.2e-25 38.9 RAB11FIP1 CCDS7602.1 7.6e-17 30.9 RAB11FIP2 CCDS81512.1 7.9e-17 31.4 RAB11FIP2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000008 22 83 PF00168 C2 calcium-dependent membrane targeting IPR019018 601 648 PF09457 Rab11-binding domain HMMSmart IPR000008 20 143 SM00239 C2 calcium-dependent membrane targeting ProfileScan IPR018029 17 128 PS50004 C2 membrane targeting protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056285 653 605536 100.0 100.0 XP_011531056 574 605536 98.7 81.2 XP_005264308 1218 605536 90.9 88.1 XP_011531057 546 605536 97.6 82.5 XP_011531058 540 605536 99.6 80.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0857 Download

>KIAA0857  1959 bp
ATGGCCCTGGTGCGGGGCGCGGAGCCGGCGGCGGGGCCTTCCCGCTGGCTGCCCACGCAC
GTCCAGGTGACGGTGCTGCGGGCCCGCGGGCTGCGGGGCAAGAGCTCGGGAGCGGGCAGC
ACCAGCGACGCGTACACGGTGATCCAGGTGGGCCGCGAGAAGTACAGTACGTCGGTGGTG
GAGAAGACGCACGGCTGTCCCGAGTGGCGTGAGGAGTGCTCCTTCGAGCTGCCGCCGGGG
GCCCTGGATGGCCTGCTGCGGGCGCAGGAGGCCGACGCGGGCCCGGCGCCCTGGGCCGCG
AGCTCCGCCGCCGCCTGCGAGCTGGTGCTCACCACCATGCACCGCTCGCTCATCGGCGTC
GACAAGTTCCTGGGCCAGGCCACGGTGGCGCTGGACGAGGTCTTCGGCGCAGGCCGCGCC
CAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGC
GAGATTGAAGTCACCATCCAGTTCACGCGCAACAACCTGAGCGCCAGTATGTTTGACCTG
TCCATGAAGGACAAGCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAG
AAGAAGTATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCT
GACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTG
CGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCA
GCCAGCGGGAGCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGC
CGTAGCAGCTGGCTGTCCACTGAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTGTTC
ACCCATAAGAGGACCTACAGCGATGAGGCCAACCAGATGCGAGTGGCTCCTCCTCGGGCC
CTTCTGGACCTTCAGGGCCACCTGGATGCTGCCTCCCGCTCTTCGCTCTGTGTCAATGGG
AGCCACATTTACAATGAGGAGCCCCAGGGCCCTGTGCGGCACCGCAGCTCCATCTCGGGC
TCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAGGGGCCT
CGTTCCACAGATGACACCTGGCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGGCAGTG
CTTGGACAGGAGGAGCTGAGTGCTCAGGCTAAAGTCCTGGCCCCTGGGGCCAGCCACCCT
GGAGAGGAGGAGGGGGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCATA
GTGGCCTCCTCTGAGGCTGTGGCAGAGAAGGAGGGAGCCCGGAAGGAGGAACGCAAGCCC
CGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGA
AGCTCTCTGGGGGAAAAGGGGGGTCCCATCCTGGGGGCCTCCCCACATCACTCATCCAGT
GGGGAGGAAAAGGCCAAGAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAG
AAACCCAGTCCCCACCCCGTGAAGCCCCTCAGTGCCGCCCCTGTGGAGGGCAGCCCCGAC
AGGAAGCAGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGCTCAAA
ACAGTCACATCTGGGAGCATTCAGCCTGTGACCCAGGCCCCCCAGGCTGGCCAGATGGTG
GACACCAAAAGGCTGAAGGACTCAGCTGTGCTGGACCAGTCGGCCAAGTACTACCACCTG
ACCCACGATGAGCTCATCAGCCTGCTCCTGCAGCGGGAGCGGGAGCTGAGCCAGCGGGAC
GAGCATGTGCAGGAGCTGGAGAGCTACATCGACCGGCTGCTGGTGCGGATCATGGAGACC
TCACCCACGCTGCTGCAGATCCCCCCGGGCCCCCCCAAA

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0857 Download

>KIAA0857  653 aa
MALVRGAEPAAGPSRWLPTHVQVTVLRARGLRGKSSGAGSTSDAYTVIQVGREKYSTSVV
EKTHGCPEWREECSFELPPGALDGLLRAQEADAGPAPWAASSAAACELVLTTMHRSLIGV
DKFLGQATVALDEVFGAGRAQHTQWYKLHSKPGKKEKERGEIEVTIQFTRNNLSASMFDL
SMKDKPRSPFSKIRDKMKGKKKYDLESASAILPSSAIEDPDLGSLGKMGKAKGFFLRNKL
RKSSLTQSNTSLGSDSTLSSASGSLAYQGPGAELLTRSPSRSSWLSTEGGRDSAQSPKLF
THKRTYSDEANQMRVAPPRALLDLQGHLDAASRSSLCVNGSHIYNEEPQGPVRHRSSISG
SLPSSGSLQAVSSRFSEEGPRSTDDTWPRGSRSNSSSEAVLGQEELSAQAKVLAPGASHP
GEEEGARLPEGKPVQVATPIVASSEAVAEKEGARKEERKPRMGLFHHHHQGLSRSELGRR
SSLGEKGGPILGASPHHSSSGEEKAKSSWFGLREAKDPTQKPSPHPVKPLSAAPVEGSPD
RKQSRSSLSIALSSGLEKLKTVTSGSIQPVTQAPQAGQMVDTKRLKDSAVLDQSAKYYHL
THDELISLLLQRERELSQRDEHVQELESYIDRLLVRIMETSPTLLQIPPGPPK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0857 Download

>pFN21ASDA0857  6688 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGCCCTGGTGCGGGG
CGCGGAGCCGGCGGCGGGGCCTTCCCGCTGGCTGCCCACGCACGTCCAGGTGACGGTGCT
GCGGGCCCGCGGGCTGCGGGGCAAGAGCTCGGGAGCGGGCAGCACCAGCGACGCGTACAC
GGTGATCCAGGTGGGCCGCGAGAAGTACAGTACGTCGGTGGTGGAGAAGACGCACGGCTG
TCCCGAGTGGCGTGAGGAGTGCTCCTTCGAGCTGCCGCCGGGGGCCCTGGATGGCCTGCT
GCGGGCGCAGGAGGCCGACGCGGGCCCGGCGCCCTGGGCCGCGAGCTCCGCCGCCGCCTG
CGAGCTGGTGCTCACCACCATGCACCGCTCGCTCATCGGCGTCGACAAGTTCCTGGGCCA
GGCCACGGTGGCGCTGGACGAGGTCTTCGGCGCAGGCCGCGCCCAGCACACGCAGTGGTA
CAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCAT
CCAGTTCACGCGCAACAACCTGAGCGCCAGTATGTTTGACCTGTCCATGAAGGACAAGCC
AAGGTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAAGAAGTATGATCTGGA
ATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGGG
CAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGAC
CCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAGCGGGAGCTTGGC
CTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGCTGGCTGTC
CACTGAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTGTTCACCCATAAGAGGACCTA
CAGCGATGAGGCCAACCAGATGCGAGTGGCTCCTCCTCGGGCCCTTCTGGACCTTCAGGG
CCACCTGGATGCTGCCTCCCGCTCTTCGCTCTGTGTCAATGGGAGCCACATTTACAATGA
GGAGCCCCAGGGCCCTGTGCGGCACCGCAGCTCCATCTCGGGCTCGCTTCCATCCTCTGG
CTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAGGGGCCTCGTTCCACAGATGACAC
CTGGCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGGCAGTGCTTGGACAGGAGGAGCT
GAGTGCTCAGGCTAAAGTCCTGGCCCCTGGGGCCAGCCACCCTGGAGAGGAGGAGGGGGC
CCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCATAGTGGCCTCCTCTGAGGC
TGTGGCAGAGAAGGAGGGAGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTCTCTTCCA
CCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAGCTCTCTGGGGGAAAA
GGGGGGTCCCATCCTGGGGGCCTCCCCACATCACTCATCCAGTGGGGAGGAAAAGGCCAA
GAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGAAACCCAGTCCCCACCC
CGTGAAGCCCCTCAGTGCCGCCCCTGTGGAGGGCAGCCCCGACAGGAAGCAGTCCCGCTC
CAGTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGCTCAAAACAGTCACATCTGGGAG
CATTCAGCCTGTGACCCAGGCCCCCCAGGCTGGCCAGATGGTGGACACCAAAAGGCTGAA
GGACTCAGCTGTGCTGGACCAGTCGGCCAAGTACTACCACCTGACCCACGATGAGCTCAT
CAGCCTGCTCCTGCAGCGGGAGCGGGAGCTGAGCCAGCGGGACGAGCATGTGCAGGAGCT
GGAGAGCTACATCGACCGGCTGCTGGTGCGGATCATGGAGACCTCACCCACGCTGCTGCA
GATCCCCCCGGGCCCCCCCAAATACGTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT