LRFN4 ORF clone pFN21AE1174

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Halotag ORF Clone pFN21AE1174

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Clone info.

Species

human

Clone Name

pFN21AE1174 Sequence (with vector) Restriction Map

Product ID

FHC24331

ORF Sequence

DNA sequence (1905 bp)
Protein sequence (635 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590781]

Gene

KIEE1174

Symbol

LRFN4

Alias : FIGLER6, SALM3, SALM3.

Description

leucine rich repeat and fibronectin type III domain containing 4

Original Clone ID

cs03047

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1905 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 635 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8153.1 2.3e-155 100.0 LRFN4 CCDS9678.1 1.5e-67 51.7 LRFN5 CCDS46071.1 3.7e-65 52.1 LRFN1 CCDS81800.1 2.3e-56 54.0 LRFN5 CCDS34443.1 1.2e-55 53.5 LRFN2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 121 141 PF00560 Leucine-rich repeat IPR001611 146 163 PF00560 Leucine-rich repeat IPR013098 283 368 PF07679 Immunoglobulin I-set IPR003961 409 479 PF00041 Fibronectin HMMSmart IPR003591 71 94 SM00369 Leucine-rich repeat IPR003591 95 118 SM00369 Leucine-rich repeat IPR003591 120 142 SM00369 Leucine-rich repeat IPR003591 144 166 SM00369 Leucine-rich repeat IPR003591 168 191 SM00369 Leucine-rich repeat IPR003591 192 215 SM00369 Leucine-rich repeat IPR000483 234 279 SM00082 Cysteine-rich flanking region IPR003599 287 369 SM00409 Immunoglobulin subtype IPR003598 293 358 SM00408 Immunoglobulin subtype 2 IPR003961 403 484 SM00060 Fibronectin ProfileScan IPR007110 281 367 PS50835 Immunoglobulin-like IPR003961 407 492 PS50853 Fibronectin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 APPLLLLLLASGAAACPLPCVCQ 24 PRIMARY 23 2 517 TLTVAVGGVLVAALLVFTVALLV 539 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005274296 635 612810 100.0 100.0 NP_076941 635 612810 100.0 100.0 XP_016876537 719 612811 51.7 87.9 NP_689660 719 612811 51.7 87.9 NP_001333102 719 612811 51.7 87.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1174 Download

>KIEE1174  1905 bp
ATGGCCCCGCCGCTCCTGCTGCTGCTGCTGGCCAGTGGAGCGGCCGCCTGCCCGCTGCCC
TGCGTCTGCCAGAACCTGTCCGAGTCGCTCAGCACCCTCTGTGCCCACCGAGGCCTGCTG
TTTGTGCCGCCCAACGTGGACCGGCGCACAGTGGAGCTGCGGCTGGCTGACAACTTCATC
CAGGCCCTGGGGCCCCCTGACTTCCGCAACATGACGGGACTGGTGGACCTGACACTGTCT
CGCAATGCCATCACCCGCATTGGGGCCCGCGCCTTTGGGGACCTCGAGAGCCTGCGTTCC
CTCCACCTTGACGGCAACAGGCTGGTGGAGCTGGGCACCGGGAGCCTCCGGGGCCCCGTC
AATCTGCAGCACCTCATCCTCAGCGGCAACCAGCTGGGCCGCATCGCGCCGGGAGCCTTC
GACGACTTCCTAGAGAGCCTGGAGGACCTGGACCTGTCCTACAACAACCTCCGGCAGGTG
CCCTGGGCCGGCATCGGCGCCATGCCTGCCCTGCACACCCTCAACCTGGACCATAACCTT
ATTGACGCACTGCCCCCAGGCGCCTTCGCCCAGCTCGGTCAGCTCTCCCGCCTGGACCTC
ACCTCCAACCGCCTGGCCACGCTGGCTCCGGACCCGCTTTTCTCTCGTGGGCGTGATGCA
GAGGCCTCTCCCGCCCCCCTGGTGCTGAGCTTTAGCGGGAACCCCCTGCACTGCAACTGT
GAGCTGCTGTGGCTGCGGCGGCTGGCGCGGCCGGACGACCTGGAAACGTGCGCCTCCCCG
CCCGGCCTGGCCGGCCGCTACTTCTGGGCAGTGCCCGAGGGCGAGTTCTCCTGTGAGCCG
CCCCTCATTGCCCGCCACACGCAGCGCCTCTGGGTGCTGGAAGGCCAGCGGGCCACGCTG
CGGTGCCGGGCCCTGGGTGACCCCGCGCCTACCATGCACTGGGTCGGTCCTGACGACCGG
TTGGTTGGCAACTCCTCCCGAGCCCGGGCTTTCCCCAACGGGACCTTAGAGATTGGGGTG
ACCGGCGCTGGGGACGCTGGGGGCTACACCTGCATCGCCACCAACCCTGCTGGTGAGGCC
ACAGCCCGAGTAGAACTGCGGGTGCTGGCCTTGCCCCATGGTGGGAACAGCAGTGCCGAG
GGGGGCCGCCCCGGGCCCTCGGACATCGCCGCCTCCGCTCGCACTGCTGCCGAGGGTGAG
GGGACGCTGGAGTCTGAGCCAGCCGTGCAGGTGACGGAGGTGACCGCCACCTCAGGGCTG
GTGAGCTGGGGTCCCGGGCGGCCAGCCGACCCAGTGTGGATGTTCCAAATCCAGTACAAC
AGCAGCGAAGATGAGACCCTCATCTACCGGATTGTCCCAGCCTCCAGCCACCACTTCCTG
CTGAAGCACCTCGTCCCCGGCGCTGACTATGACCTCTGCCTGCTGGCCTTGTCACCGGCC
GCTGGGCCCTCTGACCTCACGGCCACCAGGCTGCTGGGCTGTGCCCATTTCTCCACGCTG
CCGGCCTCGCCCCTGTGCCACGCCCTGCAGGCCCACGTGCTGGGCGGGACCCTGACCGTG
GCCGTGGGGGGTGTGCTGGTGGCTGCCTTACTGGTCTTCACTGTGGCCTTGCTGGTTCGG
GGCCGGGGGGCCGGAAATGGCCGCCTCCCCCTCAAGCTCAGCCACGTCCAGTCCCAGACC
AATGGAGGCCCCAGCCCCACACCCAAGGCCCACCCGCCGCGGAGCCCCCCGCCCCGGCCG
CAGCGCAGCTGCTCTCTGGACCTGGGAGATGCCGGGTGCTACGGTTATGCCAGGCGCCTG
GGAGGAGCTTGGGCCCGACGGAGCCACTCTGTGCATGGGGGGCTGCTCGGGGCAGGGTGC
CGGGGGGTAGGAGGCAGCGCCGAGCGGCTGGAAGAGAGTGTGGTG

ORF Protein

Cloned ORF protein sequence for pFN21AE1174 Download

>KIEE1174  635 aa
MAPPLLLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFI
QALGPPDFRNMTGLVDLTLSRNAITRIGARAFGDLESLRSLHLDGNRLVELGTGSLRGPV
NLQHLILSGNQLGRIAPGAFDDFLESLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHNL
IDALPPGAFAQLGQLSRLDLTSNRLATLAPDPLFSRGRDAEASPAPLVLSFSGNPLHCNC
ELLWLRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLEGQRATL
RCRALGDPAPTMHWVGPDDRLVGNSSRARAFPNGTLEIGVTGAGDAGGYTCIATNPAGEA
TARVELRVLALPHGGNSSAEGGRPGPSDIAASARTAAEGEGTLESEPAVQVTEVTATSGL
VSWGPGRPADPVWMFQIQYNSSEDETLIYRIVPASSHHFLLKHLVPGADYDLCLLALSPA
AGPSDLTATRLLGCAHFSTLPASPLCHALQAHVLGGTLTVAVGGVLVAALLVFTVALLVR
GRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDAGCYGYARRL
GGAWARRSHSVHGGLLGAGCRGVGGSAERLEESVV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1174 Download

>pFN21AE1174  6610 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCCCGCCGCTCCTGCTGCTGCTGCTGGCCAG
TGGAGCGGCCGCCTGCCCGCTGCCCTGCGTCTGCCAGAACCTGTCCGAGTCGCTCAGCAC
CCTCTGTGCCCACCGAGGCCTGCTGTTTGTGCCGCCCAACGTGGACCGGCGCACAGTGGA
GCTGCGGCTGGCTGACAACTTCATCCAGGCCCTGGGGCCCCCTGACTTCCGCAACATGAC
GGGACTGGTGGACCTGACACTGTCTCGCAATGCCATCACCCGCATTGGGGCCCGCGCCTT
TGGGGACCTCGAGAGCCTGCGTTCCCTCCACCTTGACGGCAACAGGCTGGTGGAGCTGGG
CACCGGGAGCCTCCGGGGCCCCGTCAATCTGCAGCACCTCATCCTCAGCGGCAACCAGCT
GGGCCGCATCGCGCCGGGAGCCTTCGACGACTTCCTAGAGAGCCTGGAGGACCTGGACCT
GTCCTACAACAACCTCCGGCAGGTGCCCTGGGCCGGCATCGGCGCCATGCCTGCCCTGCA
CACCCTCAACCTGGACCATAACCTTATTGACGCACTGCCCCCAGGCGCCTTCGCCCAGCT
CGGTCAGCTCTCCCGCCTGGACCTCACCTCCAACCGCCTGGCCACGCTGGCTCCGGACCC
GCTTTTCTCTCGTGGGCGTGATGCAGAGGCCTCTCCCGCCCCCCTGGTGCTGAGCTTTAG
CGGGAACCCCCTGCACTGCAACTGTGAGCTGCTGTGGCTGCGGCGGCTGGCGCGGCCGGA
CGACCTGGAAACGTGCGCCTCCCCGCCCGGCCTGGCCGGCCGCTACTTCTGGGCAGTGCC
CGAGGGCGAGTTCTCCTGTGAGCCGCCCCTCATTGCCCGCCACACGCAGCGCCTCTGGGT
GCTGGAAGGCCAGCGGGCCACGCTGCGGTGCCGGGCCCTGGGTGACCCCGCGCCTACCAT
GCACTGGGTCGGTCCTGACGACCGGTTGGTTGGCAACTCCTCCCGAGCCCGGGCTTTCCC
CAACGGGACCTTAGAGATTGGGGTGACCGGCGCTGGGGACGCTGGGGGCTACACCTGCAT
CGCCACCAACCCTGCTGGTGAGGCCACAGCCCGAGTAGAACTGCGGGTGCTGGCCTTGCC
CCATGGTGGGAACAGCAGTGCCGAGGGGGGCCGCCCCGGGCCCTCGGACATCGCCGCCTC
CGCTCGCACTGCTGCCGAGGGTGAGGGGACGCTGGAGTCTGAGCCAGCCGTGCAGGTGAC
GGAGGTGACCGCCACCTCAGGGCTGGTGAGCTGGGGTCCCGGGCGGCCAGCCGACCCAGT
GTGGATGTTCCAAATCCAGTACAACAGCAGCGAAGATGAGACCCTCATCTACCGGATTGT
CCCAGCCTCCAGCCACCACTTCCTGCTGAAGCACCTCGTCCCCGGCGCTGACTATGACCT
CTGCCTGCTGGCCTTGTCACCGGCCGCTGGGCCCTCTGACCTCACGGCCACCAGGCTGCT
GGGCTGTGCCCATTTCTCCACGCTGCCGGCCTCGCCCCTGTGCCACGCCCTGCAGGCCCA
CGTGCTGGGCGGGACCCTGACCGTGGCCGTGGGGGGTGTGCTGGTGGCTGCCTTACTGGT
CTTCACTGTGGCCTTGCTGGTTCGGGGCCGGGGGGCCGGAAATGGCCGCCTCCCCCTCAA
GCTCAGCCACGTCCAGTCCCAGACCAATGGAGGCCCCAGCCCCACACCCAAGGCCCACCC
GCCGCGGAGCCCCCCGCCCCGGCCGCAGCGCAGCTGCTCTCTGGACCTGGGAGATGCCGG
GTGCTACGGTTATGCCAGGCGCCTGGGAGGAGCTTGGGCCCGACGGAGCCACTCTGTGCA
TGGGGGGCTGCTCGGGGCAGGGTGCCGGGGGGTAGGAGGCAGCGCCGAGCGGCTGGAAGA
GAGTGTGGTGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT