ZNF271P ORF clone pFN21AB9665

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9665

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Clone info.

Species

human

Clone Name

pFN21AB9665 Sequence (with vector) Restriction Map

Product ID

FHC07652

Flexi Clone PID

FXC07652

ORF Sequence

DNA sequence (1269 bp)
Protein sequence (423 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587597]

Gene

KIBB9665

Symbol

ZNF271P

Alias : CT-ZFP48, HZF7, ZNF-EB, ZNF-dp, ZNF271, ZNFEB

Description

zinc finger protein 271, pseudogene

Original Clone ID

cp00248

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1269 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 423 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS75904.1 1.3e-17 58.5 ZNF79 CCDS69664.1 1.5e-17 58.5 ZNF79 CCDS6871.1 1.5e-17 58.5 ZNF79 CCDS233.1 9.7e-17 56.2 ZNF436 CCDS12504.1 9.8e-17 54.1 ZNF570 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 308 328 PF00096 Zinc finger IPR007087 334 356 PF00096 Zinc finger HMMSmart IPR015880 250 272 SM00355 Zinc finger IPR015880 278 300 SM00355 Zinc finger IPR015880 306 328 SM00355 Zinc finger IPR015880 334 356 SM00355 Zinc finger IPR015880 362 384 SM00355 Zinc finger ProfileScan IPR007087 250 277 PS50157 Zinc finger IPR007087 278 305 PS50157 Zinc finger IPR007087 306 333 PS50157 Zinc finger IPR007087 334 361 PS50157 Zinc finger IPR007087 362 389 PS50157 Zinc finger Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9665 Download

>KIBB9665  1269 bp
ATGTGTGTGGGAAAGCCTTCAGTCAGAGCTCAGATCTTATTCTGCATCAGAGAATCCATA
CTGGGGAGAAACCATATCCATGTAATCAGTGTAGCAAAAGTTTCAGTCAGAATTCAGACC
TTATTAAACATCGAAGGATCCACACTGGAGAGAAACCCTATAAATGTAATGAGTGTGGGA
AAGCTTTTAATCAGAGCTCAGTCCTTATTTTACATCAGAGGATTCATACTGGAGAGAAAC
CCTATCCCTGTGATCAATGTAGCAAAACCTTCAGTAGGCTTTCAGATCTTATTAATCATC
AACGAATTCACACTGGAGAGAAGCCTTACCCATGTAATCAGTGCAATAAAATGTTTAGTC
GAAGATGAGATCTTGTTAAACATCACAGAATTCATACAGGTGAGAAACCCTATGAATGTG
ATGAATGTGGGAAAACCTTTAGTCAGAGCTCCAACCTTATTCTTCATCAGAGAATCCACA
CTGGAGAGAAACCTTATGCATGTAGTGATTGTACTAAAAGCTTTAGTCGCCGTTCAGATC
TTGTTAAGCATCAAAGAATACACACTGGAGAGAAACCATATGCATGTAATCAGTGTGATA
AAAGTTTTAGTCAAAGCTCAGACCTCACTAAACATCAGAGAGTACACTCTGGTGAAAAGC
CTTATCATTGCAATAGTTGTGAGAAAGCCTTCAGTCAGAGTTCTGACCTTATTCTTCATC
AGAGAATTCACACTGGAGAAAAACTATTATCTGTGCACACAGTGCAGCAAAAGTTTCAGT
CAGATCTCAGACCTCATTAAACACCAGAGAATCCACACTGGGGAAAAACCATATAAATGC
AGTGAGTGCAGGAAGGCTTTCAGTCAGTGCTCAGCTCTTACCCTACACCAGAGAATCCAC
ACTGGGAAGAAACCAAATCCATGTGATGAGTGTGGCAAAAGCTTTAGTCGGCGTTCTGAT
CTCATTAACCATCAAAAAATACACACTGGTGAAAAGCCGTATAAGTGTGATGCATGTGGG
AAAGCCTTCAGCACATGTACTGATCTTATTGAACACCAGAAAACCCATGCTGAGGAGAAA
CCCTACCAGTGTGTTCAGTGCAGCAGAAGTTGTAGCCAACTCTCTGAACTTACTATTCAT
GAGGAAGTCCATTGTGGAGAAGACAGTCAAAATGTGATGAATGTGAGAAAACCTTTAGTG
TGTACACCAACTCTATTCAGTACCAGAGACACTGTACCAGAAAAAAATCTAATGAATGCT
GTTGATTAT

ORF Protein

Cloned ORF protein sequence for pFN21AB9665 Download

>KIBB9665  423 aa
MCVGKPSVRAQILFCIRESILGRNHIHVISVAKVSVRIQTLLNIEGSTLERNPINVMSVG
KLLIRAQSLFYIRGFILERNPIPVINVAKPSVGFQILLIINEFTLERSLTHVISAIKCLV
EDEILLNITEFIQVRNPMNVMNVGKPLVRAPTLFFIRESTLERNLMHVVIVLKALVAVQI
LLSIKEYTLERNHMHVISVIKVLVKAQTSLNIREYTLVKSLIIAIVVRKPSVRVLTLFFI
REFTLEKNYYLCTQCSKSFSQISDLIKHQRIHTGEKPYKCSECRKAFSQCSALTLHQRIH
TGKKPNPCDECGKSFSRRSDLINHQKIHTGEKPYKCDACGKAFSTCTDLIEHQKTHAEEK
PYQCVQCSRSCSQLSELTIHEEVHCGEDSQNVMNVRKPLVCTPTLFSTRDTVPEKNLMNA
VDY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9665 Download

>pFN21AB9665  5974 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTGTGTGGGAAAGCCTTCAGTCAGAGCTCAGAT
CTTATTCTGCATCAGAGAATCCATACTGGGGAGAAACCATATCCATGTAATCAGTGTAGC
AAAAGTTTCAGTCAGAATTCAGACCTTATTAAACATCGAAGGATCCACACTGGAGAGAAA
CCCTATAAATGTAATGAGTGTGGGAAAGCTTTTAATCAGAGCTCAGTCCTTATTTTACAT
CAGAGGATTCATACTGGAGAGAAACCCTATCCCTGTGATCAATGTAGCAAAACCTTCAGT
AGGCTTTCAGATCTTATTAATCATCAACGAATTCACACTGGAGAGAAGCCTTACCCATGT
AATCAGTGCAATAAAATGTTTAGTCGAAGATGAGATCTTGTTAAACATCACAGAATTCAT
ACAGGTGAGAAACCCTATGAATGTGATGAATGTGGGAAAACCTTTAGTCAGAGCTCCAAC
CTTATTCTTCATCAGAGAATCCACACTGGAGAGAAACCTTATGCATGTAGTGATTGTACT
AAAAGCTTTAGTCGCCGTTCAGATCTTGTTAAGCATCAAAGAATACACACTGGAGAGAAA
CCATATGCATGTAATCAGTGTGATAAAAGTTTTAGTCAAAGCTCAGACCTCACTAAACAT
CAGAGAGTACACTCTGGTGAAAAGCCTTATCATTGCAATAGTTGTGAGAAAGCCTTCAGT
CAGAGTTCTGACCTTATTCTTCATCAGAGAATTCACACTGGAGAAAAACTATTATCTGTG
CACACAGTGCAGCAAAAGTTTCAGTCAGATCTCAGACCTCATTAAACACCAGAGAATCCA
CACTGGGGAAAAACCATATAAATGCAGTGAGTGCAGGAAGGCTTTCAGTCAGTGCTCAGC
TCTTACCCTACACCAGAGAATCCACACTGGGAAGAAACCAAATCCATGTGATGAGTGTGG
CAAAAGCTTTAGTCGGCGTTCTGATCTCATTAACCATCAAAAAATACACACTGGTGAAAA
GCCGTATAAGTGTGATGCATGTGGGAAAGCCTTCAGCACATGTACTGATCTTATTGAACA
CCAGAAAACCCATGCTGAGGAGAAACCCTACCAGTGTGTTCAGTGCAGCAGAAGTTGTAG
CCAACTCTCTGAACTTACTATTCATGAGGAAGTCCATTGTGGAGAAGACAGTCAAAATGT
GATGAATGTGAGAAAACCTTTAGTGTGTACACCAACTCTATTCAGTACCAGAGACACTGT
ACCAGAAAAAAATCTAATGAATGCTGTTGATTATGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT